Warning: Permanently added '172.25.82.60' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 820846 --chroot fedora-rawhide-i386 --detached default Version: 0.22 Task: {'build_id': 820846, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-i386', 'enable_net': False, 'fetch_sources_only': True, 'git_hash': '1fcec34ca3e54f096ff3d4d779f36b19a0143daa', 'git_repo': '@scitech/octave4.4/libsedml', 'memory_reqs': 2048, 'package_name': 'libsedml', 'package_version': '1:0.4.3-19.fc30', 'project_dirname': 'octave4.4', 'project_name': 'octave4.4', 'project_owner': '@scitech', 'repos': [{'id': 'copr_base', 'name': 'Copr repository', 'url': 'https://copr-be.cloud.fedoraproject.org/results/@scitech/octave4.4/fedora-rawhide-i386/'}], 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/@scitech/octave4.4/libsedml.git', 'committish': '1fcec34ca3e54f096ff3d4d779f36b19a0143daa'}, 'source_type': 8, 'submitter': 'orion', 'task_id': '820846-fedora-rawhide-i386', 'timeout': 64800, 'use_bootstrap_container': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/@scitech/octave4.4/libsedml.git /tmp/tmptnlyco87/libsedml --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/@scitech/octave4.4/libsedml.git', '/tmp/tmptnlyco87/libsedml', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/tmptnlyco87/libsedml'... Running: git checkout 1fcec34ca3e54f096ff3d4d779f36b19a0143daa cmd: ['git', 'checkout', '1fcec34ca3e54f096ff3d4d779f36b19a0143daa'] cwd: /tmp/tmptnlyco87/libsedml rc: 0 stdout: stderr: Note: checking out '1fcec34ca3e54f096ff3d4d779f36b19a0143daa'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 1fcec34 automatic import of libsedml 1:0.4.3-19.fc30 Running: cp -r . /tmp/tmpp8rvlqqy cmd: ['cp', '-r', '.', '/tmp/tmpp8rvlqqy'] cwd: /tmp/tmptnlyco87/libsedml rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/tmptnlyco87/.config/rpkg.conf Running: rpkg -C /tmp/tmptnlyco87/.config/rpkg.conf sources --outdir /tmp/tmpp8rvlqqy /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running: unbuffer /usr/bin/mock --buildsrpm --spec /tmp/tmpp8rvlqqy/libsedml.spec --sources /tmp/tmpp8rvlqqy --configdir /var/lib/copr-rpmbuild/results/configs --resultdir /var/lib/copr-rpmbuild/results --define %_disable_source_fetch 0 --uniqueext 1541648147.970132 -r child WARNING: Could not find required logging config file: /var/lib/copr-rpmbuild/results/configs/logging.ini. Using default... INFO: mock.py version 1.4.13 starting (python version = 3.6.5)... Start: init plugins INFO: tmpfs initialized INFO: selinux disabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins Start: run INFO: Start(/tmp/tmpp8rvlqqy/libsedml.spec) Config(820846-fedora-rawhide-i386) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/820846-fedora-rawhide-i386-1541648147.970132/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled HW Info plugin Mock Version: 1.4.13 INFO: Mock Version: 1.4.13 Start: dnf install 'Copr repository' 1.4 MB/s | 105 kB 00:00 fedora 75 MB/s | 57 MB 00:00 Last metadata expiration check: 0:00:00 ago on Thu 08 Nov 2018 03:35:49 AM UTC. Dependencies resolved. ================================================================================ Group Packages ================================================================================ Marking packages as installed by the group: @Buildsystem building group info gawk diffutils sed make bzip2 which unzip util-linux grep tar gzip findutils shadow-utils bash cpio fedora-release redhat-rpm-config xz rpm-build coreutils patch ================================================================================ Package Arch Version Repository Size ================================================================================ Installing group packages: bash i686 4.4.23-5.fc30 fedora 1.5 M bzip2 i686 1.0.6-28.fc29 fedora 52 k coreutils i686 8.30-7.fc30 fedora 1.1 M cpio i686 2.12-9.fc29 fedora 258 k diffutils i686 3.6-5.fc29 fedora 358 k fedora-release noarch 30-0.12 fedora 8.6 k findutils i686 1:4.6.0-21.fc30 fedora 514 k gawk i686 4.2.1-3.fc29 fedora 1.1 M grep i686 3.1-8.fc29 fedora 256 k gzip i686 1.9-7.fc29 fedora 154 k info i686 6.5-11.fc30 fedora 181 k make i686 1:4.2.1-10.fc29 fedora 494 k patch i686 2.7.6-7.fc30 fedora 137 k redhat-rpm-config noarch 123-1.fc30 fedora 60 k rpm-build i686 4.14.2.1-2.fc30 fedora 115 k sed i686 4.5-2.fc29 fedora 292 k shadow-utils i686 2:4.6-3.fc30 fedora 1.2 M tar i686 2:1.30-6.fc29 fedora 829 k unzip i686 6.0-40.fc29 fedora 179 k util-linux i686 2.33-0.1.fc30 fedora 2.4 M which i686 2.21-11.fc29 fedora 42 k xz i686 5.2.4-3.fc29 fedora 151 k Installing dependencies: audit-libs i686 3.0-0.4.20180831git0047a6c.fc30 fedora 112 k basesystem noarch 11-6.fc29 fedora 6.9 k binutils i686 2.31.1-15.fc30 fedora 5.8 M brotli i686 1.0.5-1.fc29 fedora 321 k bzip2-libs i686 1.0.6-28.fc29 fedora 40 k ca-certificates noarch 2018.2.26-2.fc30 fedora 385 k chkconfig i686 1.11-2.fc30 fedora 170 k coreutils-common i686 8.30-7.fc30 fedora 1.9 M cracklib i686 2.9.6-17.fc30 fedora 77 k crypto-policies noarch 20181026-1.gitd42aaa6.fc30 fedora 46 k curl i686 7.62.0-1.fc30 fedora 315 k cyrus-sasl-lib i686 2.1.27-0.4rc7.fc30 fedora 97 k dwz i686 0.12-9.fc29 fedora 109 k efi-srpm-macros noarch 4-1.fc30 fedora 22 k elfutils i686 0.174-3.fc30 fedora 309 k elfutils-default-yama-scope noarch 0.174-3.fc30 fedora 15 k elfutils-libelf i686 0.174-3.fc30 fedora 183 k elfutils-libs i686 0.174-3.fc30 fedora 295 k expat i686 2.2.6-1.fc30 fedora 99 k fedora-gpg-keys noarch 30-0.1 fedora 97 k fedora-release-common noarch 30-0.12 fedora 16 k fedora-repos noarch 30-0.1 fedora 8.7 k fedora-repos-rawhide noarch 30-0.1 fedora 7.9 k file i686 5.34-3.fc29 fedora 49 k file-libs i686 5.34-3.fc29 fedora 532 k filesystem i686 3.9-2.fc29 fedora 1.1 M fpc-srpm-macros noarch 1.1-5.fc29 fedora 7.5 k gc i686 7.6.4-4.fc29 fedora 105 k gdb-headless i686 8.2.50.20181016-7.fc30 fedora 3.7 M gdbm-libs i686 1:1.18-1.fc30 fedora 53 k ghc-srpm-macros noarch 1.4.2-8.fc29 fedora 7.4 k glib2 i686 2.58.1-2.fc30 fedora 2.6 M glibc i686 2.28.9000-13.fc30 fedora 3.6 M glibc-all-langpacks i686 2.28.9000-13.fc30 fedora 25 M glibc-common i686 2.28.9000-13.fc30 fedora 801 k gmp i686 1:6.1.2-8.fc29 fedora 270 k gnat-srpm-macros noarch 4-4.fc30 fedora 7.9 k go-srpm-macros noarch 2-18.fc29 fedora 11 k guile i686 5:2.0.14-12.fc29 fedora 3.5 M keyutils-libs i686 1.5.11-1.fc30 fedora 25 k krb5-libs i686 1.16.1-25.fc30 fedora 772 k libacl i686 2.2.53-2.fc29 fedora 27 k libarchive i686 3.3.3-1.fc30 fedora 382 k libatomic_ops i686 7.6.6-1.fc29 fedora 34 k libattr i686 2.4.48-4.fc30 fedora 17 k libbabeltrace i686 1.5.6-1.fc29 fedora 219 k libblkid i686 2.33-0.1.fc30 fedora 160 k libcap i686 2.25-12.fc29 fedora 50 k libcap-ng i686 0.7.9-5.fc30 fedora 27 k libcom_err i686 1.44.4-1.fc30 fedora 27 k libcurl i686 7.62.0-1.fc30 fedora 280 k libdb i686 5.3.28-34.fc30 fedora 807 k libdb-utils i686 5.3.28-34.fc30 fedora 133 k libfdisk i686 2.33-0.1.fc30 fedora 212 k libffi i686 3.1-18.fc29 fedora 31 k libgcc i686 8.2.1-4.fc30 fedora 102 k libgcrypt i686 1.8.3-3.fc29 fedora 429 k libgpg-error i686 1.31-2.fc29 fedora 241 k libidn2 i686 2.0.5-2.fc29 fedora 88 k libipt i686 2.0-1.fc30 fedora 60 k libmetalink i686 0.1.3-7.fc29 fedora 31 k libmount i686 2.33-0.1.fc30 fedora 180 k libnghttp2 i686 1.34.0-1.fc30 fedora 75 k libnsl2 i686 1.2.0-3.20180605git4a062cf.fc30 fedora 57 k libpkgconf i686 1.5.3-2.fc29 fedora 37 k libpsl i686 0.20.2-5.fc29 fedora 59 k libpwquality i686 1.4.0-11.fc30 fedora 97 k libselinux i686 2.8-4.fc30 fedora 85 k libsemanage i686 2.8-5.fc30 fedora 119 k libsepol i686 2.8-2.fc29 fedora 326 k libsigsegv i686 2.11-6.fc29 fedora 26 k libsmartcols i686 2.33-0.1.fc30 fedora 115 k libssh i686 0.8.5-1.fc30 fedora 229 k libstdc++ i686 8.2.1-4.fc30 fedora 491 k libtasn1 i686 4.13-6.fc30 fedora 70 k libtirpc i686 1.1.4-1.rc1.fc30 fedora 105 k libtool-ltdl i686 2.4.6-27.fc30 fedora 36 k libunistring i686 0.9.10-4.fc29 fedora 423 k libutempter i686 1.1.6-15.fc29 fedora 26 k libuuid i686 2.33-0.1.fc30 fedora 27 k libverto i686 0.3.0-6.fc29 fedora 22 k libxcrypt i686 4.2.3-1.fc30 fedora 73 k libxcrypt-common noarch 4.2.3-1.fc30 fedora 33 k libxml2 i686 2.9.8-4.fc29 fedora 692 k libzstd i686 1.3.6-1.fc30 fedora 243 k lua-libs i686 5.3.5-2.fc29 fedora 127 k lz4-libs i686 1.8.2-2.fc29 fedora 63 k mpfr i686 3.1.6-3.fc30 fedora 220 k ncurses i686 6.1-8.20180923.fc30 fedora 363 k ncurses-base noarch 6.1-8.20180923.fc30 fedora 58 k ncurses-libs i686 6.1-8.20180923.fc30 fedora 305 k nim-srpm-macros noarch 1-3.fc29 fedora 8.0 k ocaml-srpm-macros noarch 5-4.fc29 fedora 7.8 k openblas-srpm-macros noarch 2-4.fc29 fedora 7.2 k openldap i686 2.4.46-10.fc30 fedora 299 k openssl-libs i686 1:1.1.1-6.fc30 fedora 1.3 M p11-kit i686 0.23.14-1.fc30 fedora 236 k p11-kit-trust i686 0.23.14-1.fc30 fedora 127 k pam i686 1.3.1-4.fc30 fedora 647 k pcre i686 8.42-5.fc30 fedora 186 k pcre2 i686 10.32-4.fc30 fedora 237 k perl-srpm-macros noarch 1-28.fc29 fedora 8.1 k pkgconf i686 1.5.3-2.fc29 fedora 39 k pkgconf-m4 noarch 1.5.3-2.fc29 fedora 17 k pkgconf-pkg-config i686 1.5.3-2.fc29 fedora 15 k popt i686 1.16-16.fc30 fedora 57 k publicsuffix-list-dafsa noarch 20180723-1.fc29 fedora 54 k python-pip-wheel noarch 18.0-4.fc30 fedora 1.2 M python-setuptools-wheel noarch 40.4.3-1.fc30 fedora 274 k python-srpm-macros noarch 3-39.fc30 fedora 12 k python3-libs i686 3.7.1-2.fc30 fedora 7.9 M qt5-srpm-macros noarch 5.11.2-1.fc30 fedora 9.2 k readline i686 7.0-12.fc29 fedora 196 k rpm i686 4.14.2.1-2.fc30 fedora 486 k rpm-build-libs i686 4.14.2.1-2.fc30 fedora 102 k rpm-libs i686 4.14.2.1-2.fc30 fedora 300 k rust-srpm-macros noarch 6-1.fc30 fedora 8.4 k setup noarch 2.12.3-1.fc30 fedora 148 k sqlite-libs i686 3.25.2-1.fc30 fedora 577 k systemd-libs i686 239-8.git9f3aed1.fc30 fedora 490 k tzdata noarch 2018e-2.fc29 fedora 423 k xz-libs i686 5.2.4-3.fc29 fedora 96 k zip i686 3.0-23.fc29 fedora 268 k zlib i686 1.2.11-14.fc30 fedora 91 k zstd i686 1.3.6-1.fc30 fedora 349 k Transaction Summary ================================================================================ Install 147 Packages Total download size: 88 M Installed size: 443 M Downloading Packages: (1/147): diffutils-3.6-5.fc29.i686.rpm 19 MB/s | 358 kB 00:00 (2/147): gzip-1.9-7.fc29.i686.rpm 20 MB/s | 154 kB 00:00 (3/147): shadow-utils-4.6-3.fc30.i686.rpm 28 MB/s | 1.2 MB 00:00 (4/147): gawk-4.2.1-3.fc29.i686.rpm 25 MB/s | 1.1 MB 00:00 (5/147): make-4.2.1-10.fc29.i686.rpm 26 MB/s | 494 kB 00:00 (6/147): redhat-rpm-config-123-1.fc30.noarch.rp 16 MB/s | 60 kB 00:00 (7/147): findutils-4.6.0-21.fc30.i686.rpm 28 MB/s | 514 kB 00:00 (8/147): fedora-release-30-0.12.noarch.rpm 3.0 MB/s | 8.6 kB 00:00 (9/147): bash-4.4.23-5.fc30.i686.rpm 31 MB/s | 1.5 MB 00:00 (10/147): rpm-build-4.14.2.1-2.fc30.i686.rpm 20 MB/s | 115 kB 00:00 (11/147): sed-4.5-2.fc29.i686.rpm 17 MB/s | 292 kB 00:00 (12/147): util-linux-2.33-0.1.fc30.i686.rpm 26 MB/s | 2.4 MB 00:00 (13/147): grep-3.1-8.fc29.i686.rpm 16 MB/s | 256 kB 00:00 (14/147): which-2.21-11.fc29.i686.rpm 2.4 MB/s | 42 kB 00:00 (15/147): patch-2.7.6-7.fc30.i686.rpm 25 MB/s | 137 kB 00:00 (16/147): info-6.5-11.fc30.i686.rpm 10 MB/s | 181 kB 00:00 (17/147): unzip-6.0-40.fc29.i686.rpm 10 MB/s | 179 kB 00:00 (18/147): tar-1.30-6.fc29.i686.rpm 26 MB/s | 829 kB 00:00 (19/147): cpio-2.12-9.fc29.i686.rpm 16 MB/s | 258 kB 00:00 (20/147): xz-5.2.4-3.fc29.i686.rpm 19 MB/s | 151 kB 00:00 (21/147): bzip2-1.0.6-28.fc29.i686.rpm 7.9 MB/s | 52 kB 00:00 (22/147): coreutils-8.30-7.fc30.i686.rpm 42 MB/s | 1.1 MB 00:00 (23/147): filesystem-3.9-2.fc29.i686.rpm 38 MB/s | 1.1 MB 00:00 (24/147): gmp-6.1.2-8.fc29.i686.rpm 12 MB/s | 270 kB 00:00 (25/147): libsigsegv-2.11-6.fc29.i686.rpm 5.7 MB/s | 26 kB 00:00 (26/147): readline-7.0-12.fc29.i686.rpm 25 MB/s | 196 kB 00:00 (27/147): mpfr-3.1.6-3.fc30.i686.rpm 18 MB/s | 220 kB 00:00 (28/147): audit-libs-3.0-0.4.20180831git0047a6c 24 MB/s | 112 kB 00:00 (29/147): libacl-2.2.53-2.fc29.i686.rpm 9.4 MB/s | 27 kB 00:00 (30/147): libattr-2.4.48-4.fc30.i686.rpm 7.4 MB/s | 17 kB 00:00 (31/147): libselinux-2.8-4.fc30.i686.rpm 19 MB/s | 85 kB 00:00 (32/147): libsemanage-2.8-5.fc30.i686.rpm 24 MB/s | 119 kB 00:00 (33/147): libxcrypt-4.2.3-1.fc30.i686.rpm 16 MB/s | 73 kB 00:00 (34/147): setup-2.12.3-1.fc30.noarch.rpm 26 MB/s | 148 kB 00:00 (35/147): libcap-ng-0.7.9-5.fc30.i686.rpm 7.0 MB/s | 27 kB 00:00 (36/147): libblkid-2.33-0.1.fc30.i686.rpm 16 MB/s | 160 kB 00:00 (37/147): glibc-2.28.9000-13.fc30.i686.rpm 46 MB/s | 3.6 MB 00:00 (38/147): libfdisk-2.33-0.1.fc30.i686.rpm 10 MB/s | 212 kB 00:00 (39/147): libsmartcols-2.33-0.1.fc30.i686.rpm 24 MB/s | 115 kB 00:00 (40/147): libmount-2.33-0.1.fc30.i686.rpm 8.2 MB/s | 180 kB 00:00 (41/147): libutempter-1.1.6-15.fc29.i686.rpm 4.0 MB/s | 26 kB 00:00 (42/147): libuuid-2.33-0.1.fc30.i686.rpm 5.2 MB/s | 27 kB 00:00 (43/147): pam-1.3.1-4.fc30.i686.rpm 41 MB/s | 647 kB 00:00 (44/147): ncurses-libs-6.1-8.20180923.fc30.i686 14 MB/s | 305 kB 00:00 (45/147): systemd-libs-239-8.git9f3aed1.fc30.i6 24 MB/s | 490 kB 00:00 (46/147): zlib-1.2.11-14.fc30.i686.rpm 15 MB/s | 91 kB 00:00 (47/147): dwz-0.12-9.fc29.i686.rpm 30 MB/s | 109 kB 00:00 (48/147): efi-srpm-macros-4-1.fc30.noarch.rpm 7.1 MB/s | 22 kB 00:00 (49/147): file-5.34-3.fc29.i686.rpm 11 MB/s | 49 kB 00:00 (50/147): fpc-srpm-macros-1.1-5.fc29.noarch.rpm 1.7 MB/s | 7.5 kB 00:00 (51/147): ghc-srpm-macros-1.4.2-8.fc29.noarch.r 3.7 MB/s | 7.4 kB 00:00 (52/147): gnat-srpm-macros-4-4.fc30.noarch.rpm 3.7 MB/s | 7.9 kB 00:00 (53/147): go-srpm-macros-2-18.fc29.noarch.rpm 5.3 MB/s | 11 kB 00:00 (54/147): nim-srpm-macros-1-3.fc29.noarch.rpm 3.8 MB/s | 8.0 kB 00:00 (55/147): ocaml-srpm-macros-5-4.fc29.noarch.rpm 4.1 MB/s | 7.8 kB 00:00 (56/147): openblas-srpm-macros-2-4.fc29.noarch. 3.6 MB/s | 7.2 kB 00:00 (57/147): perl-srpm-macros-1-28.fc29.noarch.rpm 3.9 MB/s | 8.1 kB 00:00 (58/147): python-srpm-macros-3-39.fc30.noarch.r 5.2 MB/s | 12 kB 00:00 (59/147): qt5-srpm-macros-5.11.2-1.fc30.noarch. 4.5 MB/s | 9.2 kB 00:00 (60/147): rust-srpm-macros-6-1.fc30.noarch.rpm 2.9 MB/s | 8.4 kB 00:00 (61/147): rpm-4.14.2.1-2.fc30.i686.rpm 49 MB/s | 486 kB 00:00 (62/147): zip-3.0-23.fc29.i686.rpm 33 MB/s | 268 kB 00:00 (63/147): guile-2.0.14-12.fc29.i686.rpm 13 MB/s | 3.5 MB 00:00 (64/147): fedora-release-common-30-0.12.noarch. 67 kB/s | 16 kB 00:00 (65/147): elfutils-libelf-0.174-3.fc30.i686.rpm 20 MB/s | 183 kB 00:00 (66/147): elfutils-0.174-3.fc30.i686.rpm 21 MB/s | 309 kB 00:00 (67/147): elfutils-libs-0.174-3.fc30.i686.rpm 16 MB/s | 295 kB 00:00 (68/147): pkgconf-pkg-config-1.5.3-2.fc29.i686. 3.6 MB/s | 15 kB 00:00 (69/147): popt-1.16-16.fc30.i686.rpm 8.6 MB/s | 57 kB 00:00 (70/147): rpm-build-libs-4.14.2.1-2.fc30.i686.r 13 MB/s | 102 kB 00:00 (71/147): rpm-libs-4.14.2.1-2.fc30.i686.rpm 15 MB/s | 300 kB 00:00 (72/147): binutils-2.31.1-15.fc30.i686.rpm 17 MB/s | 5.8 MB 00:00 (73/147): zstd-1.3.6-1.fc30.i686.rpm 7.5 MB/s | 349 kB 00:00 (74/147): pcre-8.42-5.fc30.i686.rpm 32 MB/s | 186 kB 00:00 (75/147): bzip2-libs-1.0.6-28.fc29.i686.rpm 11 MB/s | 40 kB 00:00 (76/147): libcap-2.25-12.fc29.i686.rpm 5.3 MB/s | 50 kB 00:00 (77/147): coreutils-common-8.30-7.fc30.i686.rpm 52 MB/s | 1.9 MB 00:00 (78/147): ncurses-6.1-8.20180923.fc30.i686.rpm 12 MB/s | 363 kB 00:00 (79/147): gdb-headless-8.2.50.20181016-7.fc30.i 22 MB/s | 3.7 MB 00:00 (80/147): xz-libs-5.2.4-3.fc29.i686.rpm 4.2 MB/s | 96 kB 00:00 (81/147): basesystem-11-6.fc29.noarch.rpm 2.3 MB/s | 6.9 kB 00:00 (82/147): openssl-libs-1.1.1-6.fc30.i686.rpm 37 MB/s | 1.3 MB 00:00 (83/147): libsepol-2.8-2.fc29.i686.rpm 27 MB/s | 326 kB 00:00 (84/147): pcre2-10.32-4.fc30.i686.rpm 30 MB/s | 237 kB 00:00 (85/147): libxcrypt-common-4.2.3-1.fc30.noarch. 9.4 MB/s | 33 kB 00:00 (86/147): ncurses-base-6.1-8.20180923.fc30.noar 23 MB/s | 58 kB 00:00 (87/147): cracklib-2.9.6-17.fc30.i686.rpm 22 MB/s | 77 kB 00:00 (88/147): libnsl2-1.2.0-3.20180605git4a062cf.fc 11 MB/s | 57 kB 00:00 (89/147): libdb-5.3.28-34.fc30.i686.rpm 52 MB/s | 807 kB 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00:00 (120/147): krb5-libs-1.16.1-25.fc30.i686.rpm 20 MB/s | 772 kB 00:00 (121/147): libxml2-2.9.8-4.fc29.i686.rpm 39 MB/s | 692 kB 00:00 (122/147): fedora-gpg-keys-30-0.1.noarch.rpm 12 MB/s | 97 kB 00:00 (123/147): fedora-repos-rawhide-30-0.1.noarch.r 2.1 MB/s | 7.9 kB 00:00 (124/147): gdbm-libs-1.18-1.fc30.i686.rpm 6.8 MB/s | 53 kB 00:00 (125/147): glib2-2.58.1-2.fc30.i686.rpm 52 MB/s | 2.6 MB 00:00 (126/147): python-setuptools-wheel-40.4.3-1.fc3 33 MB/s | 274 kB 00:00 (127/147): sqlite-libs-3.25.2-1.fc30.i686.rpm 42 MB/s | 577 kB 00:00 (128/147): libpkgconf-1.5.3-2.fc29.i686.rpm 9.7 MB/s | 37 kB 00:00 (129/147): p11-kit-0.23.14-1.fc30.i686.rpm 31 MB/s | 236 kB 00:00 (130/147): python-pip-wheel-18.0-4.fc30.noarch. 15 MB/s | 1.2 MB 00:00 (131/147): p11-kit-trust-0.23.14-1.fc30.i686.rp 19 MB/s | 127 kB 00:00 (132/147): keyutils-libs-1.5.11-1.fc30.i686.rpm 8.3 MB/s | 25 kB 00:00 (133/147): libverto-0.3.0-6.fc29.i686.rpm 8.2 MB/s | 22 kB 00:00 (134/147): libtasn1-4.13-6.fc30.i686.rpm 14 MB/s | 70 kB 00:00 (135/147): python3-libs-3.7.1-2.fc30.i686.rpm 39 MB/s | 7.9 MB 00:00 (136/147): libmetalink-0.1.3-7.fc29.i686.rpm 1.0 MB/s | 31 kB 00:00 (137/147): curl-7.62.0-1.fc30.i686.rpm 8.3 MB/s | 315 kB 00:00 (138/147): brotli-1.0.5-1.fc29.i686.rpm 33 MB/s | 321 kB 00:00 (139/147): libcurl-7.62.0-1.fc30.i686.rpm 18 MB/s | 280 kB 00:00 (140/147): libidn2-2.0.5-2.fc29.i686.rpm 18 MB/s | 88 kB 00:00 (141/147): libnghttp2-1.34.0-1.fc30.i686.rpm 16 MB/s | 75 kB 00:00 (142/147): libpsl-0.20.2-5.fc29.i686.rpm 13 MB/s | 59 kB 00:00 (143/147): openldap-2.4.46-10.fc30.i686.rpm 34 MB/s | 299 kB 00:00 (144/147): libssh-0.8.5-1.fc30.i686.rpm 18 MB/s | 229 kB 00:00 (145/147): publicsuffix-list-dafsa-20180723-1.f 16 MB/s | 54 kB 00:00 (146/147): cyrus-sasl-lib-2.1.27-0.4rc7.fc30.i6 20 MB/s | 97 kB 00:00 (147/147): glibc-all-langpacks-2.28.9000-13.fc3 73 MB/s | 25 MB 00:00 -------------------------------------------------------------------------------- Total 62 MB/s | 88 MB 00:01 warning: /var/lib/mock/820846-fedora-rawhide-i386-1541648147.970132/root/var/cache/dnf/fedora-6cb74b5c20b9e175/packages/gawk-4.2.1-3.fc29.i686.rpm: Header V3 RSA/SHA256 Signature, key ID cfc659b9: NOKEY Importing GPG key 0xCFC659B9: Userid : "Fedora (30) " Fingerprint: F1D8 EC98 F241 AAF2 0DF6 9420 EF3C 111F CFC6 59B9 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-30-primary Key imported successfully Importing GPG key 0x429476B4: Userid : "Fedora 29 (29) " Fingerprint: 5A03 B4DD 8254 ECA0 2FDA 1637 A20A A56B 4294 76B4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-29-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.9-2.fc29.i686 1/1 Preparing : 1/1 Installing : publicsuffix-list-dafsa-20180723-1.fc29.noarch 1/147 Installing : python-setuptools-wheel-40.4.3-1.fc30.noarch 2/147 Installing : python-pip-wheel-18.0-4.fc30.noarch 3/147 Installing : fedora-gpg-keys-30-0.1.noarch 4/147 Installing : fedora-release-common-30-0.12.noarch 5/147 Installing : fedora-release-30-0.12.noarch 6/147 Installing : fedora-repos-rawhide-30-0.1.noarch 7/147 Installing : fedora-repos-30-0.1.noarch 8/147 Installing : setup-2.12.3-1.fc30.noarch 9/147 Running scriptlet: setup-2.12.3-1.fc30.noarch 9/147 warning: /etc/hosts created as /etc/hosts.rpmnew Installing : filesystem-3.9-2.fc29.i686 10/147 Installing : basesystem-11-6.fc29.noarch 11/147 Installing : tzdata-2018e-2.fc29.noarch 12/147 Installing : pkgconf-m4-1.5.3-2.fc29.noarch 13/147 Installing : ncurses-base-6.1-8.20180923.fc30.noarch 14/147 Installing : libxcrypt-common-4.2.3-1.fc30.noarch 15/147 Installing : 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46/147 Installing : readline-7.0-12.fc29.i686 47/147 Installing : libattr-2.4.48-4.fc30.i686 48/147 Installing : libacl-2.2.53-2.fc29.i686 49/147 Installing : sed-4.5-2.fc29.i686 50/147 Installing : libcap-2.25-12.fc29.i686 51/147 Installing : libffi-3.1-18.fc29.i686 52/147 Installing : libcom_err-1.44.4-1.fc30.i686 53/147 Running scriptlet: libcom_err-1.44.4-1.fc30.i686 53/147 Installing : info-6.5-11.fc30.i686 54/147 Installing : libunistring-0.9.10-4.fc29.i686 55/147 Installing : expat-2.2.6-1.fc30.i686 56/147 Installing : elfutils-default-yama-scope-0.174-3.fc30.noarch 57/147 Running scriptlet: elfutils-default-yama-scope-0.174-3.fc30.noarch 57/147 Installing : elfutils-libs-0.174-3.fc30.i686 58/147 Installing : libidn2-2.0.5-2.fc29.i686 59/147 Installing : findutils-1:4.6.0-21.fc30.i686 60/147 Running scriptlet: findutils-1:4.6.0-21.fc30.i686 60/147 Installing : p11-kit-0.23.14-1.fc30.i686 61/147 Running scriptlet: p11-kit-0.23.14-1.fc30.i686 61/147 Installing : 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cyrus-sasl-lib-2.1.27-0.4rc7.fc30.i686 128/147 Running scriptlet: cyrus-sasl-lib-2.1.27-0.4rc7.fc30.i686 128/147 Installing : openldap-2.4.46-10.fc30.i686 129/147 Installing : shadow-utils-2:4.6-3.fc30.i686 130/147 Running scriptlet: libutempter-1.1.6-15.fc29.i686 131/147 Installing : libutempter-1.1.6-15.fc29.i686 131/147 Installing : binutils-2.31.1-15.fc30.i686 132/147 Running scriptlet: binutils-2.31.1-15.fc30.i686 132/147 Installing : libarchive-3.3.3-1.fc30.i686 133/147 Installing : brotli-1.0.5-1.fc29.i686 134/147 Installing : libnghttp2-1.34.0-1.fc30.i686 135/147 Installing : libcurl-7.62.0-1.fc30.i686 136/147 Installing : curl-7.62.0-1.fc30.i686 137/147 Installing : rpm-libs-4.14.2.1-2.fc30.i686 138/147 Installing : rpm-4.14.2.1-2.fc30.i686 139/147 Installing : efi-srpm-macros-4-1.fc30.noarch 140/147 Installing : redhat-rpm-config-123-1.fc30.noarch 141/147 Installing : gdb-headless-8.2.50.20181016-7.fc30.i686 142/147 Installing : rpm-build-libs-4.14.2.1-2.fc30.i686 143/147 Installing : rpm-build-4.14.2.1-2.fc30.i686 144/147 Installing : util-linux-2.33-0.1.fc30.i686 145/147 Running scriptlet: util-linux-2.33-0.1.fc30.i686 145/147 Installing : make-1:4.2.1-10.fc29.i686 146/147 Running scriptlet: make-1:4.2.1-10.fc29.i686 146/147 Installing : which-2.21-11.fc29.i686 147/147 Running scriptlet: filesystem-3.9-2.fc29.i686 147/147 Running scriptlet: glibc-all-langpacks-2.28.9000-13.fc30.i686 147/147 Running scriptlet: glibc-common-2.28.9000-13.fc30.i686 147/147 Running scriptlet: info-6.5-11.fc30.i686 147/147 Running scriptlet: glib2-2.58.1-2.fc30.i686 147/147 Verifying : gawk-4.2.1-3.fc29.i686 1/147 Verifying : shadow-utils-2:4.6-3.fc30.i686 2/147 Verifying : diffutils-3.6-5.fc29.i686 3/147 Verifying : gzip-1.9-7.fc29.i686 4/147 Verifying : util-linux-2.33-0.1.fc30.i686 5/147 Verifying : make-1:4.2.1-10.fc29.i686 6/147 Verifying : bash-4.4.23-5.fc30.i686 7/147 Verifying : redhat-rpm-config-123-1.fc30.noarch 8/147 Verifying : findutils-1:4.6.0-21.fc30.i686 9/147 Verifying : fedora-release-30-0.12.noarch 10/147 Verifying : sed-4.5-2.fc29.i686 11/147 Verifying : rpm-build-4.14.2.1-2.fc30.i686 12/147 Verifying : grep-3.1-8.fc29.i686 13/147 Verifying : which-2.21-11.fc29.i686 14/147 Verifying : patch-2.7.6-7.fc30.i686 15/147 Verifying : tar-2:1.30-6.fc29.i686 16/147 Verifying : info-6.5-11.fc30.i686 17/147 Verifying : unzip-6.0-40.fc29.i686 18/147 Verifying : cpio-2.12-9.fc29.i686 19/147 Verifying : coreutils-8.30-7.fc30.i686 20/147 Verifying : xz-5.2.4-3.fc29.i686 21/147 Verifying : bzip2-1.0.6-28.fc29.i686 22/147 Verifying : filesystem-3.9-2.fc29.i686 23/147 Verifying : glibc-2.28.9000-13.fc30.i686 24/147 Verifying : gmp-1:6.1.2-8.fc29.i686 25/147 Verifying : libsigsegv-2.11-6.fc29.i686 26/147 Verifying : mpfr-3.1.6-3.fc30.i686 27/147 Verifying : readline-7.0-12.fc29.i686 28/147 Verifying : audit-libs-3.0-0.4.20180831git0047a6c.fc30.i686 29/147 Verifying : libacl-2.2.53-2.fc29.i686 30/147 Verifying : libattr-2.4.48-4.fc30.i686 31/147 Verifying : libselinux-2.8-4.fc30.i686 32/147 Verifying : libsemanage-2.8-5.fc30.i686 33/147 Verifying : libxcrypt-4.2.3-1.fc30.i686 34/147 Verifying : setup-2.12.3-1.fc30.noarch 35/147 Verifying : libblkid-2.33-0.1.fc30.i686 36/147 Verifying : libcap-ng-0.7.9-5.fc30.i686 37/147 Verifying : libfdisk-2.33-0.1.fc30.i686 38/147 Verifying : libmount-2.33-0.1.fc30.i686 39/147 Verifying : libsmartcols-2.33-0.1.fc30.i686 40/147 Verifying : libutempter-1.1.6-15.fc29.i686 41/147 Verifying : libuuid-2.33-0.1.fc30.i686 42/147 Verifying : ncurses-libs-6.1-8.20180923.fc30.i686 43/147 Verifying : pam-1.3.1-4.fc30.i686 44/147 Verifying : systemd-libs-239-8.git9f3aed1.fc30.i686 45/147 Verifying : zlib-1.2.11-14.fc30.i686 46/147 Verifying : guile-5:2.0.14-12.fc29.i686 47/147 Verifying : dwz-0.12-9.fc29.i686 48/147 Verifying : efi-srpm-macros-4-1.fc30.noarch 49/147 Verifying : file-5.34-3.fc29.i686 50/147 Verifying : fpc-srpm-macros-1.1-5.fc29.noarch 51/147 Verifying : ghc-srpm-macros-1.4.2-8.fc29.noarch 52/147 Verifying : gnat-srpm-macros-4-4.fc30.noarch 53/147 Verifying : go-srpm-macros-2-18.fc29.noarch 54/147 Verifying : nim-srpm-macros-1-3.fc29.noarch 55/147 Verifying : ocaml-srpm-macros-5-4.fc29.noarch 56/147 Verifying : openblas-srpm-macros-2-4.fc29.noarch 57/147 Verifying : perl-srpm-macros-1-28.fc29.noarch 58/147 Verifying : python-srpm-macros-3-39.fc30.noarch 59/147 Verifying : qt5-srpm-macros-5.11.2-1.fc30.noarch 60/147 Verifying : rpm-4.14.2.1-2.fc30.i686 61/147 Verifying : rust-srpm-macros-6-1.fc30.noarch 62/147 Verifying : zip-3.0-23.fc29.i686 63/147 Verifying : fedora-release-common-30-0.12.noarch 64/147 Verifying : binutils-2.31.1-15.fc30.i686 65/147 Verifying : elfutils-0.174-3.fc30.i686 66/147 Verifying : elfutils-libelf-0.174-3.fc30.i686 67/147 Verifying : elfutils-libs-0.174-3.fc30.i686 68/147 Verifying : gdb-headless-8.2.50.20181016-7.fc30.i686 69/147 Verifying : pkgconf-pkg-config-1.5.3-2.fc29.i686 70/147 Verifying : popt-1.16-16.fc30.i686 71/147 Verifying : rpm-build-libs-4.14.2.1-2.fc30.i686 72/147 Verifying : rpm-libs-4.14.2.1-2.fc30.i686 73/147 Verifying : zstd-1.3.6-1.fc30.i686 74/147 Verifying : pcre-8.42-5.fc30.i686 75/147 Verifying : bzip2-libs-1.0.6-28.fc29.i686 76/147 Verifying : coreutils-common-8.30-7.fc30.i686 77/147 Verifying : libcap-2.25-12.fc29.i686 78/147 Verifying : ncurses-6.1-8.20180923.fc30.i686 79/147 Verifying : openssl-libs-1:1.1.1-6.fc30.i686 80/147 Verifying : xz-libs-5.2.4-3.fc29.i686 81/147 Verifying : basesystem-11-6.fc29.noarch 82/147 Verifying : glibc-common-2.28.9000-13.fc30.i686 83/147 Verifying : libsepol-2.8-2.fc29.i686 84/147 Verifying : pcre2-10.32-4.fc30.i686 85/147 Verifying : libxcrypt-common-4.2.3-1.fc30.noarch 86/147 Verifying : ncurses-base-6.1-8.20180923.fc30.noarch 87/147 Verifying : cracklib-2.9.6-17.fc30.i686 88/147 Verifying : libdb-5.3.28-34.fc30.i686 89/147 Verifying : libnsl2-1.2.0-3.20180605git4a062cf.fc30.i686 90/147 Verifying : libpwquality-1.4.0-11.fc30.i686 91/147 Verifying : libtirpc-1.1.4-1.rc1.fc30.i686 92/147 Verifying : libgcc-8.2.1-4.fc30.i686 93/147 Verifying : libgcrypt-1.8.3-3.fc29.i686 94/147 Verifying : lz4-libs-1.8.2-2.fc29.i686 95/147 Verifying : gc-7.6.4-4.fc29.i686 96/147 Verifying : libffi-3.1-18.fc29.i686 97/147 Verifying : libtool-ltdl-2.4.6-27.fc30.i686 98/147 Verifying : libunistring-0.9.10-4.fc29.i686 99/147 Verifying : file-libs-5.34-3.fc29.i686 100/147 Verifying : libarchive-3.3.3-1.fc30.i686 101/147 Verifying : libdb-utils-5.3.28-34.fc30.i686 102/147 Verifying : fedora-repos-30-0.1.noarch 103/147 Verifying : chkconfig-1.11-2.fc30.i686 104/147 Verifying : libstdc++-8.2.1-4.fc30.i686 105/147 Verifying : elfutils-default-yama-scope-0.174-3.fc30.noarch 106/147 Verifying : expat-2.2.6-1.fc30.i686 107/147 Verifying : libbabeltrace-1.5.6-1.fc29.i686 108/147 Verifying : libipt-2.0-1.fc30.i686 109/147 Verifying : python3-libs-3.7.1-2.fc30.i686 110/147 Verifying : pkgconf-1.5.3-2.fc29.i686 111/147 Verifying : pkgconf-m4-1.5.3-2.fc29.noarch 112/147 Verifying : libzstd-1.3.6-1.fc30.i686 113/147 Verifying : lua-libs-5.3.5-2.fc29.i686 114/147 Verifying : ca-certificates-2018.2.26-2.fc30.noarch 115/147 Verifying : crypto-policies-20181026-1.gitd42aaa6.fc30.noarc 116/147 Verifying : tzdata-2018e-2.fc29.noarch 117/147 Verifying : krb5-libs-1.16.1-25.fc30.i686 118/147 Verifying : libcom_err-1.44.4-1.fc30.i686 119/147 Verifying : libgpg-error-1.31-2.fc29.i686 120/147 Verifying : libatomic_ops-7.6.6-1.fc29.i686 121/147 Verifying : libxml2-2.9.8-4.fc29.i686 122/147 Verifying : fedora-gpg-keys-30-0.1.noarch 123/147 Verifying : fedora-repos-rawhide-30-0.1.noarch 124/147 Verifying : glib2-2.58.1-2.fc30.i686 125/147 Verifying : gdbm-libs-1:1.18-1.fc30.i686 126/147 Verifying : python-pip-wheel-18.0-4.fc30.noarch 127/147 Verifying : python-setuptools-wheel-40.4.3-1.fc30.noarch 128/147 Verifying : sqlite-libs-3.25.2-1.fc30.i686 129/147 Verifying : libpkgconf-1.5.3-2.fc29.i686 130/147 Verifying : p11-kit-0.23.14-1.fc30.i686 131/147 Verifying : p11-kit-trust-0.23.14-1.fc30.i686 132/147 Verifying : keyutils-libs-1.5.11-1.fc30.i686 133/147 Verifying : libverto-0.3.0-6.fc29.i686 134/147 Verifying : libtasn1-4.13-6.fc30.i686 135/147 Verifying : curl-7.62.0-1.fc30.i686 136/147 Verifying : libmetalink-0.1.3-7.fc29.i686 137/147 Verifying : glibc-all-langpacks-2.28.9000-13.fc30.i686 138/147 Verifying : libcurl-7.62.0-1.fc30.i686 139/147 Verifying : brotli-1.0.5-1.fc29.i686 140/147 Verifying : libidn2-2.0.5-2.fc29.i686 141/147 Verifying : libnghttp2-1.34.0-1.fc30.i686 142/147 Verifying : libpsl-0.20.2-5.fc29.i686 143/147 Verifying : libssh-0.8.5-1.fc30.i686 144/147 Verifying : openldap-2.4.46-10.fc30.i686 145/147 Verifying : publicsuffix-list-dafsa-20180723-1.fc29.noarch 146/147 Verifying : cyrus-sasl-lib-2.1.27-0.4rc7.fc30.i686 147/147 Installed: bash.i686 4.4.23-5.fc30 bzip2.i686 1.0.6-28.fc29 coreutils.i686 8.30-7.fc30 cpio.i686 2.12-9.fc29 diffutils.i686 3.6-5.fc29 fedora-release.noarch 30-0.12 findutils.i686 1:4.6.0-21.fc30 gawk.i686 4.2.1-3.fc29 grep.i686 3.1-8.fc29 gzip.i686 1.9-7.fc29 info.i686 6.5-11.fc30 make.i686 1:4.2.1-10.fc29 patch.i686 2.7.6-7.fc30 redhat-rpm-config.noarch 123-1.fc30 rpm-build.i686 4.14.2.1-2.fc30 sed.i686 4.5-2.fc29 shadow-utils.i686 2:4.6-3.fc30 tar.i686 2:1.30-6.fc29 unzip.i686 6.0-40.fc29 util-linux.i686 2.33-0.1.fc30 which.i686 2.21-11.fc29 xz.i686 5.2.4-3.fc29 audit-libs.i686 3.0-0.4.20180831git0047a6c.fc30 basesystem.noarch 11-6.fc29 binutils.i686 2.31.1-15.fc30 brotli.i686 1.0.5-1.fc29 bzip2-libs.i686 1.0.6-28.fc29 ca-certificates.noarch 2018.2.26-2.fc30 chkconfig.i686 1.11-2.fc30 coreutils-common.i686 8.30-7.fc30 cracklib.i686 2.9.6-17.fc30 crypto-policies.noarch 20181026-1.gitd42aaa6.fc30 curl.i686 7.62.0-1.fc30 cyrus-sasl-lib.i686 2.1.27-0.4rc7.fc30 dwz.i686 0.12-9.fc29 efi-srpm-macros.noarch 4-1.fc30 elfutils.i686 0.174-3.fc30 elfutils-default-yama-scope.noarch 0.174-3.fc30 elfutils-libelf.i686 0.174-3.fc30 elfutils-libs.i686 0.174-3.fc30 expat.i686 2.2.6-1.fc30 fedora-gpg-keys.noarch 30-0.1 fedora-release-common.noarch 30-0.12 fedora-repos.noarch 30-0.1 fedora-repos-rawhide.noarch 30-0.1 file.i686 5.34-3.fc29 file-libs.i686 5.34-3.fc29 filesystem.i686 3.9-2.fc29 fpc-srpm-macros.noarch 1.1-5.fc29 gc.i686 7.6.4-4.fc29 gdb-headless.i686 8.2.50.20181016-7.fc30 gdbm-libs.i686 1:1.18-1.fc30 ghc-srpm-macros.noarch 1.4.2-8.fc29 glib2.i686 2.58.1-2.fc30 glibc.i686 2.28.9000-13.fc30 glibc-all-langpacks.i686 2.28.9000-13.fc30 glibc-common.i686 2.28.9000-13.fc30 gmp.i686 1:6.1.2-8.fc29 gnat-srpm-macros.noarch 4-4.fc30 go-srpm-macros.noarch 2-18.fc29 guile.i686 5:2.0.14-12.fc29 keyutils-libs.i686 1.5.11-1.fc30 krb5-libs.i686 1.16.1-25.fc30 libacl.i686 2.2.53-2.fc29 libarchive.i686 3.3.3-1.fc30 libatomic_ops.i686 7.6.6-1.fc29 libattr.i686 2.4.48-4.fc30 libbabeltrace.i686 1.5.6-1.fc29 libblkid.i686 2.33-0.1.fc30 libcap.i686 2.25-12.fc29 libcap-ng.i686 0.7.9-5.fc30 libcom_err.i686 1.44.4-1.fc30 libcurl.i686 7.62.0-1.fc30 libdb.i686 5.3.28-34.fc30 libdb-utils.i686 5.3.28-34.fc30 libfdisk.i686 2.33-0.1.fc30 libffi.i686 3.1-18.fc29 libgcc.i686 8.2.1-4.fc30 libgcrypt.i686 1.8.3-3.fc29 libgpg-error.i686 1.31-2.fc29 libidn2.i686 2.0.5-2.fc29 libipt.i686 2.0-1.fc30 libmetalink.i686 0.1.3-7.fc29 libmount.i686 2.33-0.1.fc30 libnghttp2.i686 1.34.0-1.fc30 libnsl2.i686 1.2.0-3.20180605git4a062cf.fc30 libpkgconf.i686 1.5.3-2.fc29 libpsl.i686 0.20.2-5.fc29 libpwquality.i686 1.4.0-11.fc30 libselinux.i686 2.8-4.fc30 libsemanage.i686 2.8-5.fc30 libsepol.i686 2.8-2.fc29 libsigsegv.i686 2.11-6.fc29 libsmartcols.i686 2.33-0.1.fc30 libssh.i686 0.8.5-1.fc30 libstdc++.i686 8.2.1-4.fc30 libtasn1.i686 4.13-6.fc30 libtirpc.i686 1.1.4-1.rc1.fc30 libtool-ltdl.i686 2.4.6-27.fc30 libunistring.i686 0.9.10-4.fc29 libutempter.i686 1.1.6-15.fc29 libuuid.i686 2.33-0.1.fc30 libverto.i686 0.3.0-6.fc29 libxcrypt.i686 4.2.3-1.fc30 libxcrypt-common.noarch 4.2.3-1.fc30 libxml2.i686 2.9.8-4.fc29 libzstd.i686 1.3.6-1.fc30 lua-libs.i686 5.3.5-2.fc29 lz4-libs.i686 1.8.2-2.fc29 mpfr.i686 3.1.6-3.fc30 ncurses.i686 6.1-8.20180923.fc30 ncurses-base.noarch 6.1-8.20180923.fc30 ncurses-libs.i686 6.1-8.20180923.fc30 nim-srpm-macros.noarch 1-3.fc29 ocaml-srpm-macros.noarch 5-4.fc29 openblas-srpm-macros.noarch 2-4.fc29 openldap.i686 2.4.46-10.fc30 openssl-libs.i686 1:1.1.1-6.fc30 p11-kit.i686 0.23.14-1.fc30 p11-kit-trust.i686 0.23.14-1.fc30 pam.i686 1.3.1-4.fc30 pcre.i686 8.42-5.fc30 pcre2.i686 10.32-4.fc30 perl-srpm-macros.noarch 1-28.fc29 pkgconf.i686 1.5.3-2.fc29 pkgconf-m4.noarch 1.5.3-2.fc29 pkgconf-pkg-config.i686 1.5.3-2.fc29 popt.i686 1.16-16.fc30 publicsuffix-list-dafsa.noarch 20180723-1.fc29 python-pip-wheel.noarch 18.0-4.fc30 python-setuptools-wheel.noarch 40.4.3-1.fc30 python-srpm-macros.noarch 3-39.fc30 python3-libs.i686 3.7.1-2.fc30 qt5-srpm-macros.noarch 5.11.2-1.fc30 readline.i686 7.0-12.fc29 rpm.i686 4.14.2.1-2.fc30 rpm-build-libs.i686 4.14.2.1-2.fc30 rpm-libs.i686 4.14.2.1-2.fc30 rust-srpm-macros.noarch 6-1.fc30 setup.noarch 2.12.3-1.fc30 sqlite-libs.i686 3.25.2-1.fc30 systemd-libs.i686 239-8.git9f3aed1.fc30 tzdata.noarch 2018e-2.fc29 xz-libs.i686 5.2.4-3.fc29 zip.i686 3.0-23.fc29 zlib.i686 1.2.11-14.fc30 zstd.i686 1.3.6-1.fc30 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: Start: buildsrpm Start: rpmbuild -bs sh: perl: command not found sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory Building target platforms: i686 Building for target i686 Wrote: /builddir/build/SRPMS/libsedml-0.4.3-19.fc30.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/820846-fedora-rawhide-i386-1541648147.970132/root/var/log/dnf.rpm.log /var/lib/mock/820846-fedora-rawhide-i386-1541648147.970132/root/var/log/dnf.librepo.log /var/lib/mock/820846-fedora-rawhide-i386-1541648147.970132/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/tmpp8rvlqqy/libsedml.spec) Config(child) 1 minutes 6 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running: unbuffer /usr/bin/mock --rebuild /var/lib/copr-rpmbuild/results/libsedml-0.4.3-19.fc30.src.rpm --configdir /var/lib/copr-rpmbuild/results/configs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1541648215.661962 -r child WARNING: Could not find required logging config file: /var/lib/copr-rpmbuild/results/configs/logging.ini. Using default... INFO: mock.py version 1.4.13 starting (python version = 3.6.5)... Start: init plugins INFO: tmpfs initialized INFO: selinux disabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins Start: run INFO: Start(/var/lib/copr-rpmbuild/results/libsedml-0.4.3-19.fc30.src.rpm) Config(820846-fedora-rawhide-i386) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/820846-fedora-rawhide-i386-1541648215.661962/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled HW Info plugin Mock Version: 1.4.13 INFO: Mock Version: 1.4.13 Start: dnf update 'Copr repository' 1.5 MB/s | 109 kB 00:00 fedora 79 MB/s | 57 MB 00:00 Last metadata expiration check: 0:00:00 ago on Thu 08 Nov 2018 03:37:00 AM UTC. Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for libsedml-0.4.3-19.fc30.src.rpm Start: build setup for libsedml-0.4.3-19.fc30.src.rpm sh: perl: command not found sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory Building target platforms: i686 Building for target i686 Wrote: /builddir/build/SRPMS/libsedml-0.4.3-19.fc30.src.rpm Last metadata expiration check: 0:00:00 ago on Thu 08 Nov 2018 03:37:25 AM UTC. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: R-core-devel i686 3.5.1-1.fc30 fedora 89 k R-devel i686 3.5.1-1.fc30 fedora 10 k bzip2-devel i686 1.0.6-28.fc29 fedora 215 k check-devel i686 0.12.0-3.fc29 fedora 30 k cmake i686 3.12.2-1.fc30 fedora 8.6 M expat-devel i686 2.2.6-1.fc30 fedora 49 k java-1.8.0-openjdk-devel i686 1:1.8.0.191.b12-8.fc30 fedora 9.8 M libnuml-devel i686 1.1.1-14.fc30 copr_base 54 k libsbml-devel i686 5.17.0-10.fc30 fedora 4.5 M libxml2-devel i686 2.9.8-4.fc29 fedora 1.0 M mono-core i686 4.8.0-12.fc28 fedora 18 M perl-ExtUtils-MakeMaker noarch 1:7.34-418.fc29 fedora 296 k perl-Test-Simple noarch 2:1.302140-1.fc29 fedora 509 k perl-devel i686 4:5.28.0-425.fc30 fedora 769 k perl-generators noarch 1.10-10.fc29 fedora 15 k perl-interpreter i686 4:5.28.0-425.fc30 fedora 6.4 M python3-devel i686 3.7.1-2.fc30 fedora 842 k ruby-devel i686 2.5.3-101.fc30 fedora 82 k swig i686 3.0.12-21.fc29 fedora 1.6 M texlive-collection-latexrecommended noarch 8:svn45955-21.fc30 fedora 16 k xerces-c-devel i686 3.2.2-1.fc30 fedora 502 k zlib-devel i686 1.2.11-14.fc30 fedora 46 k Installing dependencies: R-core i686 3.5.1-1.fc30 fedora 55 M R-java-devel i686 3.5.1-1.fc30 fedora 11 k acl i686 2.2.53-2.fc29 fedora 72 k adobe-mappings-cmap noarch 20171205-4.fc29 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20171205-4.fc29 fedora 118 k adobe-mappings-pdf noarch 20180407-2.fc29 fedora 706 k alsa-lib i686 1.1.7-2.fc30 fedora 425 k annobin i686 8.59-1.fc30 fedora 183 k avahi-glib i686 0.7-16.fc29 fedora 14 k avahi-libs i686 0.7-16.fc29 fedora 63 k bc i686 1.07.1-6.fc29 fedora 124 k cairo i686 1.16.0-1.fc30 fedora 750 k check i686 0.12.0-3.fc29 fedora 85 k cmake-data noarch 3.12.2-1.fc30 fedora 1.3 M cmake-filesystem i686 3.12.2-1.fc30 fedora 16 k cmake-rpm-macros noarch 3.12.2-1.fc30 fedora 16 k copy-jdk-configs noarch 3.7-2.fc29 fedora 25 k cpp i686 8.2.1-4.fc30 fedora 9.7 M cryptsetup-libs i686 2.0.5-1.fc30 fedora 318 k cups i686 1:2.2.8-5.fc30 fedora 1.3 M cups-client i686 1:2.2.8-5.fc30 fedora 63 k cups-filesystem noarch 1:2.2.8-5.fc30 fedora 12 k cups-filters i686 1.21.2-3.fc30 fedora 751 k cups-filters-libs i686 1.21.2-3.fc30 fedora 127 k cups-libs i686 1:2.2.8-5.fc30 fedora 348 k dbus i686 1:1.12.10-6.fc30 fedora 11 k dbus-common noarch 1:1.12.10-6.fc30 fedora 17 k dbus-daemon i686 1:1.12.10-6.fc30 fedora 210 k dbus-libs i686 1:1.12.10-6.fc30 fedora 159 k dbus-tools i686 1:1.12.10-6.fc30 fedora 52 k desktop-file-utils i686 0.23-9.fc29 fedora 70 k device-mapper i686 1.02.152-1.fc30 fedora 153 k device-mapper-libs i686 1.02.152-1.fc30 fedora 194 k emacs-filesystem noarch 1:26.1-7.fc30 fedora 10 k fontconfig i686 2.13.1-1.fc30 fedora 246 k fontconfig-devel i686 2.13.1-1.fc30 fedora 127 k fontpackages-filesystem noarch 1.44-22.fc29 fedora 7.7 k freetype i686 2.9.1-6.fc30 fedora 373 k freetype-devel i686 2.9.1-6.fc30 fedora 441 k fribidi i686 1.0.5-1.fc29 fedora 83 k gcc i686 8.2.1-4.fc30 fedora 21 M gcc-c++ i686 8.2.1-4.fc30 fedora 12 M gcc-gfortran i686 8.2.1-4.fc30 fedora 11 M gettext i686 0.19.8.1-17.fc29 fedora 1.0 M gettext-libs i686 0.19.8.1-17.fc29 fedora 289 k ghostscript i686 9.25-1.fc30 fedora 41 k giflib i686 5.1.4-2.fc29 fedora 48 k glibc-devel i686 2.28.9000-13.fc30 fedora 1.0 M glibc-headers i686 2.28.9000-13.fc30 fedora 465 k gnutls i686 3.6.4-5.fc30 fedora 871 k google-droid-sans-fonts noarch 20120715-14.fc29 fedora 2.5 M graphite2 i686 1.3.10-6.fc30 fedora 115 k groff-base i686 1.22.3-17.fc29 fedora 1.0 M harfbuzz i686 2.1.0-1.fc30 fedora 419 k iptables-libs i686 1.8.0-3.fc29 fedora 57 k isl i686 0.16.1-7.fc29 fedora 964 k java-1.8.0-openjdk i686 1:1.8.0.191.b12-8.fc30 fedora 240 k java-1.8.0-openjdk-headless i686 1:1.8.0.191.b12-8.fc30 fedora 32 M javapackages-filesystem noarch 5.3.0-2.fc30 fedora 12 k jbig2dec-libs i686 0.14-3.fc29 fedora 68 k jbigkit-libs i686 2.1-15.fc30 fedora 50 k json-c i686 0.13.1-3.fc29 fedora 39 k jsoncpp i686 1.8.4-5.fc29 fedora 96 k kernel-headers i686 4.20.0-0.rc1.git0.1.fc30 fedora 1.2 M kmod-libs i686 25-4.fc30 fedora 65 k lcms2 i686 2.9-4.fc30 fedora 166 k less i686 530-2.fc29 fedora 157 k libICE i686 1.0.9-14.fc29 fedora 69 k libRmath i686 3.5.1-1.fc30 fedora 122 k libSM i686 1.2.3-1.fc30 fedora 40 k libX11 i686 1.6.7-1.fc30 fedora 620 k libX11-common noarch 1.6.7-1.fc30 fedora 155 k libX11-devel i686 1.6.7-1.fc30 fedora 974 k libX11-xcb i686 1.6.7-1.fc30 fedora 11 k libXau i686 1.0.8-14.fc29 fedora 29 k libXau-devel i686 1.0.8-14.fc29 fedora 14 k libXaw i686 1.0.13-11.fc29 fedora 185 k libXcomposite i686 0.4.4-15.fc29 fedora 23 k libXcursor i686 1.1.15-4.fc29 fedora 31 k libXext i686 1.3.3-10.fc29 fedora 40 k libXfixes i686 5.0.3-8.fc29 fedora 19 k libXft i686 2.3.2-11.fc29 fedora 61 k libXft-devel i686 2.3.2-11.fc29 fedora 18 k libXi i686 1.7.9-8.fc29 fedora 41 k libXinerama i686 1.1.4-2.fc29 fedora 14 k libXmu i686 1.1.2-12.fc29 fedora 71 k libXpm i686 3.5.12-8.fc29 fedora 58 k libXrandr i686 1.5.1-8.fc29 fedora 28 k libXrender i686 0.9.10-8.fc29 fedora 27 k libXrender-devel i686 0.9.10-8.fc29 fedora 16 k libXt i686 1.1.5-9.fc29 fedora 184 k libXtst i686 1.2.3-8.fc29 fedora 21 k libXxf86misc i686 1.0.4-2.fc29 fedora 21 k libXxf86vm i686 1.1.4-10.fc29 fedora 19 k libargon2 i686 20161029-6.fc29 fedora 32 k libasan i686 8.2.1-4.fc30 fedora 417 k libatomic i686 8.2.1-4.fc30 fedora 39 k libcroco i686 0.6.12-5.fc29 fedora 115 k libdatrie i686 0.2.9-8.fc29 fedora 33 k liberation-fonts-common noarch 1:2.00.3-1.fc29 fedora 14 k liberation-mono-fonts noarch 1:2.00.3-1.fc29 fedora 492 k libexif i686 0.6.21-17.fc29 fedora 348 k libfontenc i686 1.1.3-9.fc29 fedora 29 k libgdiplus i686 5.6-2.fc29 fedora 196 k libgfortran i686 8.2.1-4.fc30 fedora 601 k libgomp i686 8.2.1-4.fc30 fedora 210 k libgs i686 9.25-1.fc30 fedora 3.1 M libicu i686 62.1-2.fc29 fedora 9.0 M libicu-devel i686 62.1-2.fc29 fedora 917 k libidn i686 1.35-3.fc29 fedora 232 k libijs i686 0.35-8.fc29 fedora 28 k libjpeg-turbo i686 2.0.0-1.fc29 fedora 167 k libmcpp i686 2.7.2-21.fc29 fedora 80 k libmpc i686 1.1.0-2.fc29 fedora 63 k libmpx i686 8.2.1-4.fc30 fedora 44 k libnuml i686 1.1.1-14.fc30 copr_base 2.4 M libpaper i686 1.1.24-22.fc29 fedora 41 k libpcap i686 14:1.9.0-2.fc29 fedora 156 k libpng i686 2:1.6.35-1.fc30 fedora 116 k libpng-devel i686 2:1.6.35-1.fc30 fedora 311 k libquadmath i686 8.2.1-4.fc30 fedora 230 k libquadmath-devel i686 8.2.1-4.fc30 fedora 42 k libsbml i686 5.17.0-10.fc30 fedora 2.4 M libseccomp i686 2.3.3-3.fc29 fedora 58 k libstdc++-devel i686 8.2.1-4.fc30 fedora 2.1 M libthai i686 0.1.28-1.fc29 fedora 200 k libtiff i686 4.0.9-13.fc30 fedora 180 k libubsan i686 8.2.1-4.fc30 fedora 173 k libusbx i686 1.0.22-1.fc29 fedora 68 k libuuid-devel i686 2.33-0.1.fc30 fedora 28 k libuv i686 1:1.23.2-1.fc30 fedora 129 k libxcb i686 1.13.1-1.fc30 fedora 220 k libxcb-devel i686 1.13.1-1.fc30 fedora 1.1 M libxcrypt-devel i686 4.2.3-1.fc30 fedora 26 k libyaml i686 0.2.1-2.fc29 fedora 59 k lksctp-tools i686 1.0.16-10.fc29 fedora 94 k lua i686 5.3.5-2.fc29 fedora 195 k lua-posix i686 33.3.1-11.fc29 fedora 177 k mcpp i686 2.7.2-21.fc29 fedora 27 k mono-data i686 4.8.0-12.fc28 fedora 4.4 M mono-data-sqlite i686 4.8.0-12.fc28 fedora 103 k mono-extras i686 4.8.0-12.fc28 fedora 465 k mono-mvc i686 4.8.0-12.fc28 fedora 484 k mono-wcf i686 4.8.0-12.fc28 fedora 946 k mono-web i686 4.8.0-12.fc28 fedora 2.5 M mono-winforms i686 4.8.0-12.fc28 fedora 1.6 M nettle i686 3.4-7.fc30 fedora 309 k nspr i686 4.20.0-1.fc30 fedora 132 k nss i686 3.39.0-3.fc30 fedora 679 k nss-softokn i686 3.39.0-3.fc30 fedora 379 k nss-softokn-freebl i686 3.39.0-3.fc30 fedora 208 k nss-sysinit i686 3.39.0-3.fc30 fedora 20 k nss-util i686 3.39.0-2.fc30 fedora 81 k openblas-Rblas i686 0.3.3-2.fc30 fedora 3.7 M openjpeg2 i686 2.3.0-9.fc30 fedora 156 k pango i686 1.42.4-1.fc30 fedora 272 k pcre-cpp i686 8.42-5.fc30 fedora 28 k pcre-devel i686 8.42-5.fc30 fedora 532 k pcre-utf16 i686 8.42-5.fc30 fedora 174 k pcre-utf32 i686 8.42-5.fc30 fedora 165 k perl-Carp noarch 1.50-417.fc29 fedora 29 k perl-Data-Dumper i686 2.172-1.fc30 fedora 55 k perl-Devel-PPPort i686 3.43-1.fc30 fedora 115 k perl-Digest noarch 1.17-417.fc29 fedora 24 k perl-Digest-MD5 i686 2.55-417.fc29 fedora 35 k perl-Encode i686 4:2.98-6.fc29 fedora 1.1 M perl-Errno i686 1.29-425.fc30 fedora 25 k perl-Exporter noarch 5.73-418.fc29 fedora 31 k perl-ExtUtils-Command noarch 1:7.34-418.fc29 fedora 14 k perl-ExtUtils-Install noarch 2.14-418.fc29 fedora 45 k perl-ExtUtils-Manifest noarch 1:1.71-3.fc29 fedora 34 k perl-ExtUtils-ParseXS noarch 1:3.39-417.fc29 fedora 188 k perl-Fedora-VSP noarch 0.001-12.fc29 fedora 23 k perl-File-Path noarch 2.16-1.fc30 fedora 36 k perl-File-Temp noarch 1:0.230.800-2.fc29 fedora 60 k perl-Filter i686 2:1.59-1.fc29 fedora 79 k perl-Getopt-Long noarch 1:2.50-417.fc29 fedora 61 k perl-HTTP-Tiny noarch 0.076-1.fc29 fedora 55 k perl-IO i686 1.39-425.fc30 fedora 90 k perl-MIME-Base64 i686 3.15-417.fc29 fedora 30 k perl-PathTools i686 3.75-1.fc30 fedora 86 k perl-Pod-Escapes noarch 1:1.07-417.fc29 fedora 19 k perl-Pod-Perldoc noarch 3.28.01-418.fc29 fedora 83 k perl-Pod-Simple noarch 1:3.35-417.fc29 fedora 211 k perl-Pod-Usage noarch 4:1.69-417.fc29 fedora 32 k perl-Scalar-List-Utils i686 3:1.50-417.fc29 fedora 66 k perl-Socket i686 4:2.027-417.fc29 fedora 55 k perl-Storable i686 1:3.11-5.fc30 fedora 96 k perl-Term-ANSIColor noarch 4.06-418.fc29 fedora 44 k perl-Term-Cap noarch 1.17-417.fc29 fedora 22 k perl-Test-Harness noarch 1:3.42-418.fc29 fedora 276 k perl-Text-ParseWords noarch 3.30-417.fc29 fedora 16 k perl-Text-Tabs+Wrap noarch 2013.0523-417.fc29 fedora 23 k perl-Text-Unidecode noarch 1.30-7.fc29 fedora 145 k perl-Time-Local noarch 2:1.280-3.fc29 fedora 31 k perl-Unicode-EastAsianWidth noarch 1.33-14.fc29 fedora 14 k perl-Unicode-Normalize i686 1.26-417.fc29 fedora 74 k perl-XML-Parser i686 2.44-13.fc29 fedora 224 k perl-XML-XPath noarch 1.44-1.fc30 fedora 83 k perl-constant noarch 1.33-418.fc29 fedora 23 k perl-encoding i686 4:2.22-6.fc29 fedora 63 k perl-libintl-perl i686 1.29-5.fc29 fedora 812 k perl-libs i686 4:5.28.0-425.fc30 fedora 1.7 M perl-macros i686 4:5.28.0-425.fc30 fedora 20 k perl-open noarch 1.11-425.fc30 fedora 26 k perl-parent noarch 1:0.237-2.fc29 fedora 14 k perl-podlators noarch 1:4.11-3.fc29 fedora 115 k perl-threads i686 1:2.22-417.fc29 fedora 59 k perl-threads-shared i686 1.58-417.fc29 fedora 44 k perl-version i686 7:0.99.24-5.fc29 fedora 63 k pixman i686 0.34.0-10.fc29 fedora 266 k poppler i686 0.67.0-2.fc30 fedora 944 k poppler-data noarch 0.4.9-2.fc29 fedora 2.1 M poppler-utils i686 0.67.0-2.fc30 fedora 197 k python-rpm-macros noarch 3-39.fc30 fedora 12 k python3 i686 3.7.1-2.fc30 fedora 39 k python3-pyparsing noarch 2.2.0-3.fc29 fedora 138 k python3-rpm-generators noarch 6-1.fc30 fedora 23 k python3-rpm-macros noarch 3-39.fc30 fedora 11 k python3-setuptools noarch 40.4.3-1.fc30 fedora 618 k qpdf i686 8.2.1-1.fc30 fedora 63 k qpdf-libs i686 8.2.1-1.fc30 fedora 435 k qrencode-libs i686 3.4.4-6.fc29 fedora 57 k rhash i686 1.3.5-3.fc29 fedora 145 k ruby i686 2.5.3-101.fc30 fedora 41 k ruby-libs i686 2.5.3-101.fc30 fedora 2.8 M rubygem-openssl i686 2.1.2-101.fc30 fedora 148 k rubygem-psych i686 3.0.2-101.fc30 fedora 51 k rubygems noarch 2.7.6-101.fc30 fedora 264 k rubypick noarch 1.1.1-9.fc29 fedora 9.7 k sqlite i686 3.25.2-1.fc30 fedora 663 k subunit i686 1.3.0-2.fc29 fedora 32 k subunit-devel i686 1.3.0-2.fc29 fedora 11 k systemd i686 239-8.git9f3aed1.fc30 fedora 3.6 M systemd-pam i686 239-8.git9f3aed1.fc30 fedora 173 k systemd-rpm-macros noarch 239-8.git9f3aed1.fc30 fedora 20 k systemtap-sdt-devel i686 4.0-2.fc30 fedora 69 k tcl i686 1:8.6.8-2.fc29 fedora 1.2 M tcl-devel i686 1:8.6.8-2.fc29 fedora 189 k texinfo i686 6.5-11.fc30 fedora 1.1 M texinfo-tex i686 6.5-11.fc30 fedora 146 k texlive-ae noarch 8:svn15878.1.4-21.fc30 fedora 98 k texlive-algorithms noarch 8:svn42428-21.fc30 fedora 28 k texlive-amscls noarch 8:svn46099-21.fc30 fedora 1.2 M texlive-amsfonts noarch 8:svn29208.3.04-21.fc30 fedora 3.6 M texlive-amsmath noarch 8:svn47349-21.fc30 fedora 52 k texlive-anysize noarch 8:svn15878.0-21.fc30 fedora 17 k texlive-attachfile noarch 8:svn42099-21.fc30 fedora 27 k texlive-auto-pst-pdf noarch 8:svn23723.0.6-21.fc30 fedora 22 k texlive-avantgar noarch 8:svn31835.0-21.fc30 fedora 297 k texlive-babel noarch 8:svn47932-21.fc30 fedora 279 k texlive-babel-english noarch 8:svn44495-21.fc30 fedora 26 k texlive-babelbib noarch 8:svn25245.1.31-21.fc30 fedora 52 k texlive-base i686 7:20180414-25.fc30 fedora 2.2 M texlive-beamer noarch 8:svn46705-21.fc30 fedora 215 k texlive-bera noarch 8:svn20031.0-21.fc30 fedora 347 k texlive-beton noarch 8:svn15878.0-21.fc30 fedora 21 k texlive-bibtex i686 7:20180414-25.fc30 fedora 453 k texlive-bidi noarch 8:svn48397-21.fc30 fedora 165 k texlive-bookman noarch 8:svn31835.0-21.fc30 fedora 338 k texlive-booktabs noarch 8:svn40846-21.fc30 fedora 22 k texlive-breakurl noarch 8:svn29901.1.40-21.fc30 fedora 22 k texlive-breqn noarch 8:svn43071-21.fc30 fedora 48 k texlive-caption noarch 8:svn47968-21.fc30 fedora 58 k texlive-carlisle noarch 8:svn47876-21.fc30 fedora 31 k texlive-changepage noarch 8:svn15878.1.0c-21.fc30 fedora 25 k texlive-charter noarch 8:svn15878.0-21.fc30 fedora 200 k texlive-chngcntr noarch 8:svn47577-21.fc30 fedora 21 k texlive-cite noarch 8:svn36428.5.5-21.fc30 fedora 37 k texlive-cm noarch 8:svn45811-21.fc30 fedora 288 k texlive-cm-super noarch 8:svn15878.0-21.fc30 fedora 62 M texlive-cmap noarch 8:svn42428-21.fc30 fedora 26 k texlive-cmextra noarch 8:svn42428-21.fc30 fedora 45 k texlive-collection-basic noarch 8:svn45851-21.fc30 fedora 16 k texlive-collection-fontsrecommended noarch 8:svn35830.0-21.fc30 fedora 16 k texlive-collection-latex noarch 8:svn41614-21.fc30 fedora 16 k texlive-colortbl noarch 8:svn47614-21.fc30 fedora 22 k texlive-courier noarch 8:svn35058.0-21.fc30 fedora 516 k texlive-crop noarch 8:svn15878.1.5-21.fc30 fedora 24 k texlive-csquotes noarch 8:svn47564-21.fc30 fedora 41 k texlive-ctable noarch 8:svn38672-21.fc30 fedora 23 k texlive-currfile noarch 8:svn40725-21.fc30 fedora 26 k texlive-dvipdfmx i686 7:20180414-25.fc30 fedora 2.9 M texlive-dvips i686 7:20180414-25.fc30 fedora 695 k texlive-ec noarch 8:svn25033.1.0-21.fc30 fedora 475 k texlive-enctex noarch 8:svn34957.0-21.fc30 fedora 51 k texlive-enumitem noarch 8:svn24146.3.5.2-21.fc30 fedora 31 k texlive-environ noarch 8:svn33821.0.3-21.fc30 fedora 21 k texlive-epsf noarch 8:svn21461.2.7.4-21.fc30 fedora 24 k texlive-eso-pic noarch 8:svn47694-21.fc30 fedora 24 k texlive-etex noarch 8:svn37057.0-21.fc30 fedora 33 k texlive-etex-pkg noarch 8:svn41784-21.fc30 fedora 21 k texlive-etoolbox noarch 8:svn46602-21.fc30 fedora 31 k texlive-euenc noarch 8:svn19795.0.1h-21.fc30 fedora 27 k texlive-euler noarch 8:svn42428-21.fc30 fedora 22 k texlive-euro noarch 8:svn22191.1.1-21.fc30 fedora 21 k texlive-euro-ce noarch 8:svn25714-21.fc30 fedora 31 k texlive-eurosym noarch 8:svn17265.1.4_subrfix-21.fc30 fedora 157 k texlive-extsizes noarch 8:svn17263.1.4a-21.fc30 fedora 32 k texlive-fancybox noarch 8:svn18304.1.4-21.fc30 fedora 28 k texlive-fancyhdr noarch 8:svn44730-21.fc30 fedora 23 k texlive-fancyref noarch 8:svn15878.0.9c-21.fc30 fedora 24 k texlive-fancyvrb noarch 8:svn18492.2.8-21.fc30 fedora 32 k texlive-filecontents noarch 8:svn47890-21.fc30 fedora 21 k texlive-filehook noarch 8:svn24280.0.5d-21.fc30 fedora 27 k texlive-finstrut noarch 8:svn21719.0.5-21.fc30 fedora 25 k texlive-fix2col noarch 8:svn38770-21.fc30 fedora 21 k texlive-float noarch 8:svn15878.1.3d-21.fc30 fedora 22 k texlive-fontspec noarch 8:svn48320-21.fc30 fedora 50 k texlive-footmisc noarch 8:svn23330.5.5b-21.fc30 fedora 28 k texlive-fp noarch 8:svn15878.0-21.fc30 fedora 41 k texlive-fpl noarch 8:svn15878.1.002-21.fc30 fedora 379 k texlive-geometry noarch 8:svn47638-21.fc30 fedora 28 k texlive-glyphlist noarch 7:20180414-25.fc30 fedora 40 k texlive-graphics noarch 8:svn47350-21.fc30 fedora 40 k texlive-graphics-cfg noarch 8:svn40269-21.fc30 fedora 17 k texlive-graphics-def noarch 8:svn46267-21.fc30 fedora 33 k texlive-gsftopk i686 7:20180414-25.fc30 fedora 36 k texlive-helvetic noarch 8:svn31835.0-21.fc30 fedora 622 k texlive-hyperref noarch 8:svn46583-21.fc30 fedora 142 k texlive-hyph-utf8 noarch 8:svn48290-21.fc30 fedora 34 k texlive-hyphen-base noarch 8:svn48303-21.fc30 fedora 38 k texlive-ifetex noarch 8:svn47231-21.fc30 fedora 23 k texlive-ifluatex noarch 8:svn47293-21.fc30 fedora 24 k texlive-ifmtarg noarch 8:svn47544-21.fc30 fedora 19 k texlive-ifplatform noarch 8:svn45533-21.fc30 fedora 21 k texlive-iftex noarch 8:svn29654.0.2-21.fc30 fedora 23 k texlive-ifxetex noarch 8:svn19685.0.5-21.fc30 fedora 20 k texlive-inconsolata noarch 8:svn46319-21.fc30 fedora 366 k texlive-index noarch 8:svn24099.4.1beta-21.fc30 fedora 28 k texlive-jknapltx noarch 8:svn19440.0-21.fc30 fedora 32 k texlive-kastrup noarch 8:svn15878.0-21.fc30 fedora 17 k texlive-knuth-lib noarch 8:svn35820.0-21.fc30 fedora 51 k texlive-knuth-local noarch 8:svn38627-21.fc30 fedora 44 k texlive-koma-script noarch 8:svn47249-21.fc30 fedora 7.2 M texlive-kpathsea i686 7:20180414-25.fc30 fedora 1.1 M texlive-l3experimental noarch 8:svn47705-21.fc30 fedora 58 k texlive-l3kernel noarch 8:svn48022-21.fc30 fedora 181 k texlive-l3packages noarch 8:svn47705-21.fc30 fedora 44 k texlive-latex noarch 7:20180414-25.fc30 fedora 13 M texlive-latex-fonts noarch 8:svn28888.0-21.fc30 fedora 44 k texlive-latexbug noarch 8:svn45559-21.fc30 fedora 207 k texlive-latexconfig noarch 8:svn45777-21.fc30 fedora 21 k texlive-lib i686 7:20180414-25.fc30 fedora 543 k texlive-lineno noarch 8:svn21442.4.41-21.fc30 fedora 84 k texlive-listings noarch 8:svn37534.1.6-21.fc30 fedora 150 k texlive-lm noarch 8:svn48145-21.fc30 fedora 13 M texlive-lm-math noarch 8:svn36915.1.959-21.fc30 fedora 431 k texlive-ltabptch noarch 8:svn17533.1.74d-21.fc30 fedora 23 k texlive-ltxmisc noarch 8:svn21927.0-21.fc30 fedora 33 k texlive-lua-alt-getopt noarch 8:svn29349.0.7.0-21.fc30 fedora 17 k texlive-luabidi noarch 8:svn30790.0.2-21.fc30 fedora 24 k texlive-lualatex-math noarch 8:svn44621-21.fc30 fedora 25 k texlive-lualibs noarch 8:svn43153-21.fc30 fedora 106 k texlive-luaotfload noarch 7:20180414-25.fc30 fedora 782 k texlive-luatex i686 7:20180414-25.fc30 fedora 6.4 M texlive-luatexbase noarch 8:svn38550-21.fc30 fedora 21 k texlive-lwarp noarch 7:20180414-25.fc30 fedora 2.2 M texlive-makecmds noarch 8:svn15878.0-21.fc30 fedora 20 k texlive-makeindex i686 7:20180414-25.fc30 fedora 435 k texlive-manfnt-font noarch 8:svn45777-21.fc30 fedora 42 k texlive-marginnote noarch 8:svn48383-21.fc30 fedora 22 k texlive-marvosym noarch 8:svn29349.2.2a-21.fc30 fedora 150 k texlive-mathpazo noarch 8:svn15878.1.003-21.fc30 fedora 88 k texlive-mathspec noarch 8:svn42773-21.fc30 fedora 29 k texlive-mathtools noarch 8:svn46250-21.fc30 fedora 42 k texlive-mdwtools noarch 8:svn15878.1.05.4-21.fc30 fedora 42 k texlive-memoir noarch 8:svn47305-21.fc30 fedora 104 k texlive-metafont i686 7:20180414-25.fc30 fedora 225 k texlive-metalogo noarch 8:svn18611.0.12-21.fc30 fedora 21 k texlive-mflogo noarch 8:svn42428-21.fc30 fedora 21 k texlive-mflogo-font noarch 8:svn36898.1.002-21.fc30 fedora 36 k texlive-mfnfss noarch 8:svn46036-21.fc30 fedora 22 k texlive-mfware i686 7:20180414-25.fc30 fedora 97 k texlive-microtype noarch 8:svn46323-21.fc30 fedora 72 k texlive-mnsymbol noarch 8:svn18651.1.4-21.fc30 fedora 4.4 M texlive-mparhack noarch 8:svn15878.1.4-21.fc30 fedora 23 k texlive-mptopdf noarch 7:20180414-25.fc30 fedora 56 k texlive-ms noarch 8:svn42428-21.fc30 fedora 26 k texlive-multido noarch 8:svn18302.1.42-21.fc30 fedora 23 k texlive-natbib noarch 8:svn20668.8.31b-21.fc30 fedora 37 k texlive-ncntrsbk noarch 8:svn31835.0-21.fc30 fedora 344 k texlive-ntgclass noarch 8:svn15878.2.1a-21.fc30 fedora 41 k texlive-oberdiek noarch 7:20180414-25.fc30 fedora 14 M texlive-palatino noarch 8:svn31835.0-21.fc30 fedora 391 k texlive-paralist noarch 8:svn43021-21.fc30 fedora 23 k texlive-parallel noarch 8:svn15878.0-21.fc30 fedora 23 k texlive-parskip noarch 8:svn19963.2.0-21.fc30 fedora 21 k texlive-pdfpages noarch 8:svn45659-21.fc30 fedora 37 k texlive-pdftex i686 7:20180414-25.fc30 fedora 1.9 M texlive-pgf noarch 8:svn44231-21.fc30 fedora 812 k texlive-placeins noarch 8:svn19848.2.2-21.fc30 fedora 18 k texlive-plain noarch 8:svn43076-21.fc30 fedora 465 k texlive-polyglossia noarch 8:svn47392-21.fc30 fedora 120 k texlive-powerdot noarch 8:svn45165-21.fc30 fedora 53 k texlive-psfrag noarch 8:svn15878.3.04-21.fc30 fedora 20 k texlive-pslatex noarch 8:svn16416.0-21.fc30 fedora 26 k texlive-psnfss noarch 8:svn33946.9.2a-21.fc30 fedora 47 k texlive-pspicture noarch 8:svn15878.0-21.fc30 fedora 21 k texlive-pst-3d noarch 8:svn17257.1.10-21.fc30 fedora 23 k texlive-pst-blur noarch 8:svn15878.2.0-21.fc30 fedora 22 k texlive-pst-coil noarch 8:svn37377.1.07-21.fc30 fedora 23 k texlive-pst-eps noarch 8:svn15878.1.0-21.fc30 fedora 22 k texlive-pst-fill noarch 8:svn15878.1.01-21.fc30 fedora 23 k texlive-pst-grad noarch 8:svn15878.1.06-21.fc30 fedora 23 k texlive-pst-math noarch 8:svn34786.0.63-21.fc30 fedora 24 k texlive-pst-node noarch 8:svn46170-21.fc30 fedora 46 k texlive-pst-ovl noarch 8:svn45506-21.fc30 fedora 21 k texlive-pst-pdf noarch 7:20180414-25.fc30 fedora 963 k texlive-pst-plot noarch 8:svn47163-21.fc30 fedora 43 k texlive-pst-slpe noarch 8:svn24391.1.31-21.fc30 fedora 23 k texlive-pst-text noarch 8:svn15878.1.00-21.fc30 fedora 23 k texlive-pst-tools noarch 8:svn45978-21.fc30 fedora 24 k texlive-pst-tree noarch 8:svn43272-21.fc30 fedora 26 k texlive-pstricks noarch 8:svn48256-21.fc30 fedora 109 k texlive-pstricks-add noarch 8:svn46541-21.fc30 fedora 41 k texlive-pxfonts noarch 8:svn15878.0-21.fc30 fedora 502 k texlive-qstest noarch 8:svn15878.0-21.fc30 fedora 24 k texlive-rcs noarch 8:svn15878.0-21.fc30 fedora 33 k texlive-realscripts noarch 8:svn39706-21.fc30 fedora 24 k texlive-rsfs noarch 8:svn15878.0-21.fc30 fedora 74 k texlive-sansmath noarch 8:svn17997.1.1-21.fc30 fedora 19 k texlive-sansmathaccent noarch 8:svn30187.0-21.fc30 fedora 36 k texlive-sauerj noarch 8:svn15878.0-21.fc30 fedora 25 k texlive-section noarch 8:svn20180.0-21.fc30 fedora 29 k texlive-seminar noarch 8:svn34011.1.62-21.fc30 fedora 54 k texlive-sepnum noarch 8:svn20186.2.0-21.fc30 fedora 22 k texlive-setspace noarch 8:svn24881.6.7a-21.fc30 fedora 23 k texlive-showexpl noarch 8:svn42677-21.fc30 fedora 23 k texlive-soul noarch 8:svn15878.2.4-21.fc30 fedora 25 k texlive-subfig noarch 8:svn15878.1.3-21.fc30 fedora 26 k texlive-symbol noarch 8:svn31835.0-21.fc30 fedora 59 k texlive-tetex noarch 7:20180414-25.fc30 fedora 393 k texlive-tex i686 7:20180414-25.fc30 fedora 186 k texlive-tex-gyre noarch 8:svn48058-21.fc30 fedora 8.3 M texlive-tex-gyre-math noarch 8:svn41264-21.fc30 fedora 1.4 M texlive-tex-ini-files noarch 8:svn40533-21.fc30 fedora 20 k texlive-texconfig noarch 7:20180414-25.fc30 fedora 31 k texlive-texlive-common-doc noarch 8:svn44191-21.fc30 fedora 165 k texlive-texlive-docindex noarch 8:svn45575-21.fc30 fedora 149 k texlive-texlive-en noarch 7:20180414-25.fc30 fedora 1.6 M texlive-texlive-msg-translations noarch 8:svn48373-21.fc30 fedora 141 k texlive-texlive-scripts noarch 7:20180414-25.fc30 fedora 33 k texlive-texlive.infra noarch 7:20180414-25.fc30 fedora 161 k texlive-textcase noarch 8:svn15878.0-21.fc30 fedora 20 k texlive-thumbpdf noarch 7:20180414-25.fc30 fedora 43 k texlive-times noarch 8:svn35058.0-21.fc30 fedora 345 k texlive-tipa noarch 8:svn29349.1.3-21.fc30 fedora 2.8 M texlive-titlesec noarch 8:svn40129-21.fc30 fedora 42 k texlive-tools noarch 8:svn47671-21.fc30 fedora 69 k texlive-translator noarch 8:svn46231-21.fc30 fedora 275 k texlive-trimspaces noarch 8:svn15878.1.1-21.fc30 fedora 20 k texlive-txfonts noarch 8:svn15878.0-21.fc30 fedora 774 k texlive-type1cm noarch 8:svn21820.0-21.fc30 fedora 21 k texlive-typehtml noarch 8:svn17134.0-21.fc30 fedora 26 k texlive-ucharcat noarch 8:svn38907-21.fc30 fedora 20 k texlive-ucs noarch 8:svn35853.2.2-21.fc30 fedora 366 k texlive-underscore noarch 8:svn18261.0-21.fc30 fedora 24 k texlive-unicode-data noarch 8:svn48003-21.fc30 fedora 293 k texlive-unicode-math noarch 8:svn48309-21.fc30 fedora 70 k texlive-updmap-map noarch 8:svn48150-21.fc30 fedora 1.4 M texlive-url noarch 8:svn32528.3.4-21.fc30 fedora 25 k texlive-utopia noarch 8:svn15878.0-21.fc30 fedora 233 k texlive-varwidth noarch 8:svn24104.0.92-21.fc30 fedora 23 k texlive-wasy noarch 8:svn35831.0-21.fc30 fedora 41 k texlive-wasy2-ps noarch 8:svn35830.0-21.fc30 fedora 231 k texlive-wasysym noarch 8:svn15878.2.0-21.fc30 fedora 23 k texlive-xcolor noarch 8:svn41044-21.fc30 fedora 38 k texlive-xdvi i686 7:20180414-25.fc30 fedora 346 k texlive-xifthen noarch 8:svn38929-21.fc30 fedora 21 k texlive-xkeyval noarch 8:svn35741.2.7a-21.fc30 fedora 38 k texlive-xltxtra noarch 8:svn39453-21.fc30 fedora 22 k texlive-xunicode noarch 8:svn30466.0.981-21.fc30 fedora 49 k texlive-zapfchan noarch 8:svn31835.0-21.fc30 fedora 107 k texlive-zapfding noarch 8:svn31835.0-21.fc30 fedora 69 k tk i686 1:8.6.8-1.fc29 fedora 1.6 M tk-devel i686 1:8.6.8-1.fc29 fedora 497 k tre i686 0.8.0-23.20140228gitc2f5d13.fc29 fedora 42 k tre-common noarch 0.8.0-23.20140228gitc2f5d13.fc29 fedora 32 k tre-devel i686 0.8.0-23.20140228gitc2f5d13.fc29 fedora 12 k ttmkfdir i686 3.0.9-55.fc29 fedora 55 k tzdata-java noarch 2018e-2.fc29 fedora 151 k urw-base35-bookman-fonts noarch 20170801-11.fc29 fedora 856 k urw-base35-c059-fonts noarch 20170801-11.fc29 fedora 883 k urw-base35-d050000l-fonts noarch 20170801-11.fc29 fedora 78 k urw-base35-fonts noarch 20170801-11.fc29 fedora 11 k urw-base35-fonts-common noarch 20170801-11.fc29 fedora 22 k urw-base35-gothic-fonts noarch 20170801-11.fc29 fedora 653 k urw-base35-nimbus-mono-ps-fonts noarch 20170801-11.fc29 fedora 800 k urw-base35-nimbus-roman-fonts noarch 20170801-11.fc29 fedora 864 k urw-base35-nimbus-sans-fonts noarch 20170801-11.fc29 fedora 1.3 M urw-base35-p052-fonts noarch 20170801-11.fc29 fedora 981 k urw-base35-standard-symbols-ps-fonts noarch 20170801-11.fc29 fedora 43 k urw-base35-z003-fonts noarch 20170801-11.fc29 fedora 279 k vim-minimal i686 2:8.1.511-1.fc30 fedora 574 k xdg-utils noarch 1.1.3-3.fc29 fedora 74 k xerces-c i686 3.2.2-1.fc30 fedora 1.0 M xorg-x11-font-utils i686 1:7.5-40.fc29 fedora 98 k xorg-x11-fonts-Type1 noarch 7.5-20.fc29 fedora 517 k xorg-x11-proto-devel noarch 2018.4-2.fc29 fedora 280 k xorg-x11-server-utils i686 7.7-27.fc30 fedora 180 k xz-devel i686 5.2.4-3.fc29 fedora 56 k zziplib i686 0.13.69-1.fc29 fedora 88 k Transaction Summary ================================================================================ Install 525 Packages Total download size: 469 M Installed size: 1.2 G Downloading Packages: (1/525): R-devel-3.5.1-1.fc30.i686.rpm 1.5 MB/s | 10 kB 00:00 (2/525): R-core-devel-3.5.1-1.fc30.i686.rpm 8.8 MB/s | 89 kB 00:00 (3/525): check-devel-0.12.0-3.fc29.i686.rpm 6.6 MB/s | 30 kB 00:00 (4/525): bzip2-devel-1.0.6-28.fc29.i686.rpm 15 MB/s | 215 kB 00:00 (5/525): expat-devel-2.2.6-1.fc30.i686.rpm 7.9 MB/s | 49 kB 00:00 (6/525): libsbml-devel-5.17.0-10.fc30.i686.rpm 25 MB/s | 4.5 MB 00:00 (7/525): cmake-3.12.2-1.fc30.i686.rpm 38 MB/s | 8.6 MB 00:00 (8/525): libxml2-devel-2.9.8-4.fc29.i686.rpm 15 MB/s | 1.0 MB 00:00 (9/525): perl-ExtUtils-MakeMaker-7.34-418.fc29. 22 MB/s | 296 kB 00:00 (10/525): perl-Test-Simple-1.302140-1.fc29.noar 22 MB/s | 509 kB 00:00 (11/525): perl-devel-5.28.0-425.fc30.i686.rpm 18 MB/s | 769 kB 00:00 (12/525): java-1.8.0-openjdk-devel-1.8.0.191.b1 26 MB/s | 9.8 MB 00:00 (13/525): perl-generators-1.10-10.fc29.noarch.r 428 kB/s | 15 kB 00:00 (14/525): python3-devel-3.7.1-2.fc30.i686.rpm 24 MB/s | 842 kB 00:00 (15/525): ruby-devel-2.5.3-101.fc30.i686.rpm 11 MB/s | 82 kB 00:00 (16/525): swig-3.0.12-21.fc29.i686.rpm 28 MB/s | 1.6 MB 00:00 (17/525): texlive-collection-latexrecommended-s 3.1 MB/s | 16 kB 00:00 (18/525): xerces-c-devel-3.2.2-1.fc30.i686.rpm 22 MB/s | 502 kB 00:00 (19/525): zlib-devel-1.2.11-14.fc30.i686.rpm 7.9 MB/s | 46 kB 00:00 (20/525): mono-core-4.8.0-12.fc28.i686.rpm 45 MB/s | 18 MB 00:00 (21/525): libnuml-devel-1.1.1-14.fc30.i686.rpm 396 kB/s | 54 kB 00:00 (22/525): perl-interpreter-5.28.0-425.fc30.i686 18 MB/s | 6.4 MB 00:00 (23/525): gcc-c++-8.2.1-4.fc30.i686.rpm 30 MB/s | 12 MB 00:00 (24/525): libX11-devel-1.6.7-1.fc30.i686.rpm 29 MB/s | 974 kB 00:00 (25/525): libicu-devel-62.1-2.fc29.i686.rpm 29 MB/s | 917 kB 00:00 (26/525): pcre-devel-8.42-5.fc30.i686.rpm 25 MB/s | 532 kB 00:00 (27/525): qpdf-8.2.1-1.fc30.i686.rpm 6.4 MB/s | 63 kB 00:00 (28/525): tcl-devel-8.6.8-2.fc29.i686.rpm 12 MB/s | 189 kB 00:00 (29/525): texinfo-tex-6.5-11.fc30.i686.rpm 9.7 MB/s | 146 kB 00:00 (30/525): gcc-gfortran-8.2.1-4.fc30.i686.rpm 14 MB/s | 11 MB 00:00 (31/525): texlive-courier-svn35058.0-21.fc30.no 12 MB/s | 516 kB 00:00 (32/525): texlive-ec-svn25033.1.0-21.fc30.noarc 13 MB/s | 475 kB 00:00 (33/525): R-core-3.5.1-1.fc30.i686.rpm 46 MB/s | 55 MB 00:01 (34/525): texlive-helvetic-svn31835.0-21.fc30.n 2.6 MB/s | 622 kB 00:00 (35/525): texlive-inconsolata-svn46319-21.fc30. 41 MB/s | 366 kB 00:00 (36/525): texlive-times-svn35058.0-21.fc30.noar 23 MB/s | 345 kB 00:00 (37/525): tk-devel-8.6.8-1.fc29.i686.rpm 27 MB/s | 497 kB 00:00 (38/525): tre-devel-0.8.0-23.20140228gitc2f5d13 1.3 MB/s | 12 kB 00:00 (39/525): R-java-devel-3.5.1-1.fc30.i686.rpm 1.7 MB/s | 11 kB 00:00 (40/525): xz-devel-5.2.4-3.fc29.i686.rpm 6.3 MB/s | 56 kB 00:00 (41/525): check-0.12.0-3.fc29.i686.rpm 10 MB/s | 85 kB 00:00 (42/525): subunit-devel-1.3.0-2.fc29.i686.rpm 1.4 MB/s | 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Running transaction test Transaction test succeeded. 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perl-version-7:0.99.24-5.fc29.i686 72/525 Verifying : perl-File-Temp-1:0.230.800-2.fc29.noarch 73/525 Verifying : perl-Scalar-List-Utils-3:1.50-417.fc29.i686 74/525 Verifying : perl-Storable-1:3.11-5.fc30.i686 75/525 Verifying : perl-Term-ANSIColor-4.06-418.fc29.noarch 76/525 Verifying : perl-threads-shared-1.58-417.fc29.i686 77/525 Verifying : perl-Devel-PPPort-3.43-1.fc30.i686 78/525 Verifying : perl-Text-Tabs+Wrap-2013.0523-417.fc29.noarch 79/525 Verifying : systemtap-sdt-devel-4.0-2.fc30.i686 80/525 Verifying : perl-Fedora-VSP-0.001-12.fc29.noarch 81/525 Verifying : perl-macros-4:5.28.0-425.fc30.i686 82/525 Verifying : perl-Unicode-Normalize-1.26-417.fc29.i686 83/525 Verifying : perl-constant-1.33-418.fc29.noarch 84/525 Verifying : perl-parent-1:0.237-2.fc29.noarch 85/525 Verifying : perl-threads-1:2.22-417.fc29.i686 86/525 Verifying : python-rpm-macros-3-39.fc30.noarch 87/525 Verifying : python3-3.7.1-2.fc30.i686 88/525 Verifying : python3-rpm-generators-6-1.fc30.noarch 89/525 Verifying : python3-rpm-macros-3-39.fc30.noarch 90/525 Verifying : python3-setuptools-40.4.3-1.fc30.noarch 91/525 Verifying : ruby-2.5.3-101.fc30.i686 92/525 Verifying : ruby-libs-2.5.3-101.fc30.i686 93/525 Verifying : rubygems-2.7.6-101.fc30.noarch 94/525 Verifying : texlive-anysize-8:svn15878.0-21.fc30.noarch 95/525 Verifying : texlive-base-7:20180414-25.fc30.i686 96/525 Verifying : texlive-beamer-8:svn46705-21.fc30.noarch 97/525 Verifying : texlive-booktabs-8:svn40846-21.fc30.noarch 98/525 Verifying : texlive-breqn-8:svn43071-21.fc30.noarch 99/525 Verifying : texlive-caption-8:svn47968-21.fc30.noarch 100/525 Verifying : texlive-cite-8:svn36428.5.5-21.fc30.noarch 101/525 Verifying : texlive-cmap-8:svn42428-21.fc30.noarch 102/525 Verifying : texlive-collection-fontsrecommended-8:svn35830.0 103/525 Verifying : texlive-collection-latex-8:svn41614-21.fc30.noar 104/525 Verifying : texlive-crop-8:svn15878.1.5-21.fc30.noarch 105/525 Verifying : texlive-ctable-8:svn38672-21.fc30.noarch 106/525 Verifying : texlive-eso-pic-8:svn47694-21.fc30.noarch 107/525 Verifying : texlive-etoolbox-8:svn46602-21.fc30.noarch 108/525 Verifying : texlive-euenc-8:svn19795.0.1h-21.fc30.noarch 109/525 Verifying : texlive-euler-8:svn42428-21.fc30.noarch 110/525 Verifying : texlive-extsizes-8:svn17263.1.4a-21.fc30.noarch 111/525 Verifying : texlive-fancybox-8:svn18304.1.4-21.fc30.noarch 112/525 Verifying : texlive-fancyref-8:svn15878.0.9c-21.fc30.noarch 113/525 Verifying : texlive-fancyvrb-8:svn18492.2.8-21.fc30.noarch 114/525 Verifying : texlive-filehook-8:svn24280.0.5d-21.fc30.noarch 115/525 Verifying : texlive-float-8:svn15878.1.3d-21.fc30.noarch 116/525 Verifying : texlive-fontspec-8:svn48320-21.fc30.noarch 117/525 Verifying : texlive-fp-8:svn15878.0-21.fc30.noarch 118/525 Verifying : texlive-index-8:svn24099.4.1beta-21.fc30.noarch 119/525 Verifying : texlive-jknapltx-8:svn19440.0-21.fc30.noarch 120/525 Verifying : texlive-koma-script-8:svn47249-21.fc30.noarch 121/525 Verifying : texlive-l3experimental-8:svn47705-21.fc30.noarch 122/525 Verifying : texlive-l3kernel-8:svn48022-21.fc30.noarch 123/525 Verifying : texlive-l3packages-8:svn47705-21.fc30.noarch 124/525 Verifying : texlive-latexbug-8:svn45559-21.fc30.noarch 125/525 Verifying : texlive-lineno-8:svn21442.4.41-21.fc30.noarch 126/525 Verifying : texlive-listings-8:svn37534.1.6-21.fc30.noarch 127/525 Verifying : texlive-lwarp-7:20180414-25.fc30.noarch 128/525 Verifying : texlive-mathspec-8:svn42773-21.fc30.noarch 129/525 Verifying : texlive-mathtools-8:svn46250-21.fc30.noarch 130/525 Verifying : texlive-mdwtools-8:svn15878.1.05.4-21.fc30.noarc 131/525 Verifying : texlive-memoir-8:svn47305-21.fc30.noarch 132/525 Verifying : texlive-metalogo-8:svn18611.0.12-21.fc30.noarch 133/525 Verifying : texlive-microtype-8:svn46323-21.fc30.noarch 134/525 Verifying : texlive-ms-8:svn42428-21.fc30.noarch 135/525 Verifying : texlive-ntgclass-8:svn15878.2.1a-21.fc30.noarch 136/525 Verifying : texlive-parskip-8:svn19963.2.0-21.fc30.noarch 137/525 Verifying : texlive-pdfpages-8:svn45659-21.fc30.noarch 138/525 Verifying : texlive-polyglossia-8:svn47392-21.fc30.noarch 139/525 Verifying : texlive-powerdot-8:svn45165-21.fc30.noarch 140/525 Verifying : texlive-psfrag-8:svn15878.3.04-21.fc30.noarch 141/525 Verifying : texlive-rcs-8:svn15878.0-21.fc30.noarch 142/525 Verifying : texlive-sansmath-8:svn17997.1.1-21.fc30.noarch 143/525 Verifying : texlive-section-8:svn20180.0-21.fc30.noarch 144/525 Verifying : texlive-seminar-8:svn34011.1.62-21.fc30.noarch 145/525 Verifying : texlive-sepnum-8:svn20186.2.0-21.fc30.noarch 146/525 Verifying : texlive-setspace-8:svn24881.6.7a-21.fc30.noarch 147/525 Verifying : texlive-subfig-8:svn15878.1.3-21.fc30.noarch 148/525 Verifying : texlive-textcase-8:svn15878.0-21.fc30.noarch 149/525 Verifying : texlive-thumbpdf-7:20180414-25.fc30.noarch 150/525 Verifying : texlive-translator-8:svn46231-21.fc30.noarch 151/525 Verifying : texlive-typehtml-8:svn17134.0-21.fc30.noarch 152/525 Verifying : texlive-ucharcat-8:svn38907-21.fc30.noarch 153/525 Verifying : texlive-underscore-8:svn18261.0-21.fc30.noarch 154/525 Verifying : texlive-unicode-math-8:svn48309-21.fc30.noarch 155/525 Verifying : texlive-xcolor-8:svn41044-21.fc30.noarch 156/525 Verifying : texlive-xkeyval-8:svn35741.2.7a-21.fc30.noarch 157/525 Verifying : texlive-xltxtra-8:svn39453-21.fc30.noarch 158/525 Verifying : texlive-xunicode-8:svn30466.0.981-21.fc30.noarch 159/525 Verifying : xerces-c-3.2.2-1.fc30.i686 160/525 Verifying : libnuml-1.1.1-14.fc30.i686 161/525 Verifying : cairo-1.16.0-1.fc30.i686 162/525 Verifying : cups-1:2.2.8-5.fc30.i686 163/525 Verifying : less-530-2.fc29.i686 164/525 Verifying : libRmath-3.5.1-1.fc30.i686 165/525 Verifying : libX11-1.6.7-1.fc30.i686 166/525 Verifying : libXmu-1.1.2-12.fc29.i686 167/525 Verifying : libXt-1.1.5-9.fc29.i686 168/525 Verifying : libgfortran-8.2.1-4.fc30.i686 169/525 Verifying : libgomp-8.2.1-4.fc30.i686 170/525 Verifying : libicu-62.1-2.fc29.i686 171/525 Verifying : libjpeg-turbo-2.0.0-1.fc29.i686 172/525 Verifying : libpng-2:1.6.35-1.fc30.i686 173/525 Verifying : libtiff-4.0.9-13.fc30.i686 174/525 Verifying : openblas-Rblas-0.3.3-2.fc30.i686 175/525 Verifying : pango-1.42.4-1.fc30.i686 176/525 Verifying : tcl-1:8.6.8-2.fc29.i686 177/525 Verifying : texlive-dvips-7:20180414-25.fc30.i686 178/525 Verifying : tk-1:8.6.8-1.fc29.i686 179/525 Verifying : tre-0.8.0-23.20140228gitc2f5d13.fc29.i686 180/525 Verifying : vim-minimal-2:8.1.511-1.fc30.i686 181/525 Verifying : xdg-utils-1.1.3-3.fc29.noarch 182/525 Verifying : gcc-8.2.1-4.fc30.i686 183/525 Verifying : libmpc-1.1.0-2.fc29.i686 184/525 Verifying : libstdc++-devel-8.2.1-4.fc30.i686 185/525 Verifying : libquadmath-8.2.1-4.fc30.i686 186/525 Verifying : libquadmath-devel-8.2.1-4.fc30.i686 187/525 Verifying : libX11-xcb-1.6.7-1.fc30.i686 188/525 Verifying : libxcb-devel-1.13.1-1.fc30.i686 189/525 Verifying : xorg-x11-proto-devel-2018.4-2.fc29.noarch 190/525 Verifying : pcre-cpp-8.42-5.fc30.i686 191/525 Verifying : pcre-utf16-8.42-5.fc30.i686 192/525 Verifying : pcre-utf32-8.42-5.fc30.i686 193/525 Verifying : qpdf-libs-8.2.1-1.fc30.i686 194/525 Verifying : texinfo-6.5-11.fc30.i686 195/525 Verifying : texlive-collection-basic-8:svn45851-21.fc30.noar 196/525 Verifying : texlive-epsf-8:svn21461.2.7.4-21.fc30.noarch 197/525 Verifying : texlive-tetex-7:20180414-25.fc30.noarch 198/525 Verifying : texlive-kpathsea-7:20180414-25.fc30.i686 199/525 Verifying : texlive-latex-7:20180414-25.fc30.noarch 200/525 Verifying : texlive-graphics-8:svn47350-21.fc30.noarch 201/525 Verifying : libXft-devel-2.3.2-11.fc29.i686 202/525 Verifying : subunit-1.3.0-2.fc29.i686 203/525 Verifying : emacs-filesystem-1:26.1-7.fc30.noarch 204/525 Verifying : alsa-lib-1.1.7-2.fc30.i686 205/525 Verifying : fontconfig-2.13.1-1.fc30.i686 206/525 Verifying : giflib-5.1.4-2.fc29.i686 207/525 Verifying : java-1.8.0-openjdk-headless-1:1.8.0.191.b12-8.fc 208/525 Verifying : libXcomposite-0.4.4-15.fc29.i686 209/525 Verifying : libXext-1.3.3-10.fc29.i686 210/525 Verifying : libXi-1.7.9-8.fc29.i686 211/525 Verifying : libXrender-0.9.10-8.fc29.i686 212/525 Verifying : libXtst-1.2.3-8.fc29.i686 213/525 Verifying : xorg-x11-fonts-Type1-7.5-20.fc29.noarch 214/525 Verifying : freetype-2.9.1-6.fc30.i686 215/525 Verifying : libexif-0.6.21-17.fc29.i686 216/525 Verifying : mono-winforms-4.8.0-12.fc28.i686 217/525 Verifying : mono-mvc-4.8.0-12.fc28.i686 218/525 Verifying : mono-data-sqlite-4.8.0-12.fc28.i686 219/525 Verifying : perl-MIME-Base64-3.15-417.fc29.i686 220/525 Verifying : perl-Pod-Usage-4:1.69-417.fc29.noarch 221/525 Verifying : perl-Text-ParseWords-3.30-417.fc29.noarch 222/525 Verifying : perl-Errno-1.29-425.fc30.i686 223/525 Verifying : perl-Socket-4:2.027-417.fc29.i686 224/525 Verifying : perl-Pod-Simple-1:3.35-417.fc29.noarch 225/525 Verifying : perl-Term-Cap-1.17-417.fc29.noarch 226/525 Verifying : python3-pyparsing-2.2.0-3.fc29.noarch 227/525 Verifying : rubypick-1.1.1-9.fc29.noarch 228/525 Verifying : rubygem-openssl-2.1.2-101.fc30.i686 229/525 Verifying : rubygem-psych-3.0.2-101.fc30.i686 230/525 Verifying : texlive-amscls-8:svn46099-21.fc30.noarch 231/525 Verifying : texlive-amsfonts-8:svn29208.3.04-21.fc30.noarch 232/525 Verifying : texlive-amsmath-8:svn47349-21.fc30.noarch 233/525 Verifying : texlive-geometry-8:svn47638-21.fc30.noarch 234/525 Verifying : texlive-hyperref-8:svn46583-21.fc30.noarch 235/525 Verifying : texlive-oberdiek-7:20180414-25.fc30.noarch 236/525 Verifying : texlive-pgf-8:svn44231-21.fc30.noarch 237/525 Verifying : texlive-sansmathaccent-8:svn30187.0-21.fc30.noar 238/525 Verifying : texlive-tools-8:svn47671-21.fc30.noarch 239/525 Verifying : texlive-ucs-8:svn35853.2.2-21.fc30.noarch 240/525 Verifying : texlive-avantgar-8:svn31835.0-21.fc30.noarch 241/525 Verifying : texlive-bookman-8:svn31835.0-21.fc30.noarch 242/525 Verifying : texlive-charter-8:svn15878.0-21.fc30.noarch 243/525 Verifying : texlive-cmextra-8:svn42428-21.fc30.noarch 244/525 Verifying : texlive-euro-ce-8:svn25714-21.fc30.noarch 245/525 Verifying : texlive-euro-8:svn22191.1.1-21.fc30.noarch 246/525 Verifying : texlive-eurosym-8:svn17265.1.4_subrfix-21.fc30.n 247/525 Verifying : texlive-fpl-8:svn15878.1.002-21.fc30.noarch 248/525 Verifying : texlive-lm-math-8:svn36915.1.959-21.fc30.noarch 249/525 Verifying : texlive-lm-8:svn48145-21.fc30.noarch 250/525 Verifying : texlive-manfnt-font-8:svn45777-21.fc30.noarch 251/525 Verifying : texlive-marvosym-8:svn29349.2.2a-21.fc30.noarch 252/525 Verifying : texlive-mathpazo-8:svn15878.1.003-21.fc30.noarch 253/525 Verifying : texlive-mflogo-font-8:svn36898.1.002-21.fc30.noa 254/525 Verifying : texlive-ncntrsbk-8:svn31835.0-21.fc30.noarch 255/525 Verifying : texlive-palatino-8:svn31835.0-21.fc30.noarch 256/525 Verifying : texlive-pxfonts-8:svn15878.0-21.fc30.noarch 257/525 Verifying : texlive-rsfs-8:svn15878.0-21.fc30.noarch 258/525 Verifying : texlive-symbol-8:svn31835.0-21.fc30.noarch 259/525 Verifying : texlive-tex-gyre-math-8:svn41264-21.fc30.noarch 260/525 Verifying : texlive-tex-gyre-8:svn48058-21.fc30.noarch 261/525 Verifying : texlive-tipa-8:svn29349.1.3-21.fc30.noarch 262/525 Verifying : texlive-txfonts-8:svn15878.0-21.fc30.noarch 263/525 Verifying : texlive-utopia-8:svn15878.0-21.fc30.noarch 264/525 Verifying : texlive-wasy-8:svn35831.0-21.fc30.noarch 265/525 Verifying : texlive-wasy2-ps-8:svn35830.0-21.fc30.noarch 266/525 Verifying : texlive-wasysym-8:svn15878.2.0-21.fc30.noarch 267/525 Verifying : texlive-zapfchan-8:svn31835.0-21.fc30.noarch 268/525 Verifying : texlive-zapfding-8:svn31835.0-21.fc30.noarch 269/525 Verifying : texlive-ae-8:svn15878.1.4-21.fc30.noarch 270/525 Verifying : texlive-babel-english-8:svn44495-21.fc30.noarch 271/525 Verifying : texlive-babel-8:svn47932-21.fc30.noarch 272/525 Verifying : texlive-babelbib-8:svn25245.1.31-21.fc30.noarch 273/525 Verifying : texlive-carlisle-8:svn47876-21.fc30.noarch 274/525 Verifying : texlive-colortbl-8:svn47614-21.fc30.noarch 275/525 Verifying : texlive-fancyhdr-8:svn44730-21.fc30.noarch 276/525 Verifying : texlive-fix2col-8:svn38770-21.fc30.noarch 277/525 Verifying : texlive-graphics-cfg-8:svn40269-21.fc30.noarch 278/525 Verifying : texlive-latex-fonts-8:svn28888.0-21.fc30.noarch 279/525 Verifying : texlive-latexconfig-8:svn45777-21.fc30.noarch 280/525 Verifying : texlive-ltxmisc-8:svn21927.0-21.fc30.noarch 281/525 Verifying : texlive-mfnfss-8:svn46036-21.fc30.noarch 282/525 Verifying : texlive-mptopdf-7:20180414-25.fc30.noarch 283/525 Verifying : texlive-natbib-8:svn20668.8.31b-21.fc30.noarch 284/525 Verifying : texlive-pslatex-8:svn16416.0-21.fc30.noarch 285/525 Verifying : texlive-psnfss-8:svn33946.9.2a-21.fc30.noarch 286/525 Verifying : texlive-pspicture-8:svn15878.0-21.fc30.noarch 287/525 Verifying : texlive-url-8:svn32528.3.4-21.fc30.noarch 288/525 Verifying : texlive-etex-pkg-8:svn41784-21.fc30.noarch 289/525 Verifying : texlive-pstricks-8:svn48256-21.fc30.noarch 290/525 Verifying : texlive-currfile-8:svn40725-21.fc30.noarch 291/525 Verifying : texlive-iftex-8:svn29654.0.2-21.fc30.noarch 292/525 Verifying : texlive-kastrup-8:svn15878.0-21.fc30.noarch 293/525 Verifying : texlive-luaotfload-7:20180414-25.fc30.noarch 294/525 Verifying : texlive-marginnote-8:svn48383-21.fc30.noarch 295/525 Verifying : texlive-mparhack-8:svn15878.1.4-21.fc30.noarch 296/525 Verifying : texlive-csquotes-8:svn47564-21.fc30.noarch 297/525 Verifying : texlive-enumitem-8:svn24146.3.5.2-21.fc30.noarch 298/525 Verifying : texlive-finstrut-8:svn21719.0.5-21.fc30.noarch 299/525 Verifying : texlive-ltabptch-8:svn17533.1.74d-21.fc30.noarch 300/525 Verifying : texlive-algorithms-8:svn42428-21.fc30.noarch 301/525 Verifying : texlive-luatex-7:20180414-25.fc30.i686 302/525 Verifying : texlive-ifxetex-8:svn19685.0.5-21.fc30.noarch 303/525 Verifying : texlive-mnsymbol-8:svn18651.1.4-21.fc30.noarch 304/525 Verifying : texlive-ifetex-8:svn47231-21.fc30.noarch 305/525 Verifying : texlive-ifluatex-8:svn47293-21.fc30.noarch 306/525 Verifying : texlive-footmisc-8:svn23330.5.5b-21.fc30.noarch 307/525 Verifying : texlive-bidi-8:svn48397-21.fc30.noarch 308/525 Verifying : texlive-luabidi-8:svn30790.0.2-21.fc30.noarch 309/525 Verifying : texlive-luatexbase-8:svn38550-21.fc30.noarch 310/525 Verifying : texlive-makecmds-8:svn15878.0-21.fc30.noarch 311/525 Verifying : texlive-pst-blur-8:svn15878.2.0-21.fc30.noarch 312/525 Verifying : texlive-pst-grad-8:svn15878.1.06-21.fc30.noarch 313/525 Verifying : texlive-pst-slpe-8:svn24391.1.31-21.fc30.noarch 314/525 Verifying : texlive-pst-text-8:svn15878.1.00-21.fc30.noarch 315/525 Verifying : texlive-type1cm-8:svn21820.0-21.fc30.noarch 316/525 Verifying : texlive-pst-ovl-8:svn45506-21.fc30.noarch 317/525 Verifying : ghostscript-9.25-1.fc30.i686 318/525 Verifying : texlive-lualatex-math-8:svn44621-21.fc30.noarch 319/525 Verifying : texlive-realscripts-8:svn39706-21.fc30.noarch 320/525 Verifying : libxcb-1.13.1-1.fc30.i686 321/525 Verifying : pixman-0.34.0-10.fc29.i686 322/525 Verifying : acl-2.2.53-2.fc29.i686 323/525 Verifying : avahi-libs-0.7-16.fc29.i686 324/525 Verifying : cups-client-1:2.2.8-5.fc30.i686 325/525 Verifying : cups-filesystem-1:2.2.8-5.fc30.noarch 326/525 Verifying : cups-filters-1.21.2-3.fc30.i686 327/525 Verifying : cups-libs-1:2.2.8-5.fc30.i686 328/525 Verifying : dbus-1:1.12.10-6.fc30.i686 329/525 Verifying : dbus-libs-1:1.12.10-6.fc30.i686 330/525 Verifying : libusbx-1.0.22-1.fc29.i686 331/525 Verifying : systemd-239-8.git9f3aed1.fc30.i686 332/525 Verifying : libX11-common-1.6.7-1.fc30.noarch 333/525 Verifying : libICE-1.0.9-14.fc29.i686 334/525 Verifying : libSM-1.2.3-1.fc30.i686 335/525 Verifying : jbigkit-libs-2.1-15.fc30.i686 336/525 Verifying : fribidi-1.0.5-1.fc29.i686 337/525 Verifying : harfbuzz-2.1.0-1.fc30.i686 338/525 Verifying : libXft-2.3.2-11.fc29.i686 339/525 Verifying : libthai-0.1.28-1.fc29.i686 340/525 Verifying : texlive-lib-7:20180414-25.fc30.i686 341/525 Verifying : tre-common-0.8.0-23.20140228gitc2f5d13.fc29.noar 342/525 Verifying : desktop-file-utils-0.23-9.fc29.i686 343/525 Verifying : cpp-8.2.1-4.fc30.i686 344/525 Verifying : glibc-devel-2.28.9000-13.fc30.i686 345/525 Verifying : isl-0.16.1-7.fc29.i686 346/525 Verifying : libasan-8.2.1-4.fc30.i686 347/525 Verifying : libatomic-8.2.1-4.fc30.i686 348/525 Verifying : libmpx-8.2.1-4.fc30.i686 349/525 Verifying : libubsan-8.2.1-4.fc30.i686 350/525 Verifying : libXau-devel-1.0.8-14.fc29.i686 351/525 Verifying : perl-Text-Unidecode-1.30-7.fc29.noarch 352/525 Verifying : perl-Unicode-EastAsianWidth-1.33-14.fc29.noarch 353/525 Verifying : perl-libintl-perl-1.29-5.fc29.i686 354/525 Verifying : texlive-bibtex-7:20180414-25.fc30.i686 355/525 Verifying : texlive-cm-8:svn45811-21.fc30.noarch 356/525 Verifying : texlive-dvipdfmx-7:20180414-25.fc30.i686 357/525 Verifying : texlive-enctex-8:svn34957.0-21.fc30.noarch 358/525 Verifying : texlive-etex-8:svn37057.0-21.fc30.noarch 359/525 Verifying : texlive-glyphlist-7:20180414-25.fc30.noarch 360/525 Verifying : texlive-graphics-def-8:svn46267-21.fc30.noarch 361/525 Verifying : texlive-gsftopk-7:20180414-25.fc30.i686 362/525 Verifying : texlive-hyph-utf8-8:svn48290-21.fc30.noarch 363/525 Verifying : texlive-hyphen-base-8:svn48303-21.fc30.noarch 364/525 Verifying : texlive-knuth-lib-8:svn35820.0-21.fc30.noarch 365/525 Verifying : texlive-knuth-local-8:svn38627-21.fc30.noarch 366/525 Verifying : texlive-lua-alt-getopt-8:svn29349.0.7.0-21.fc30. 367/525 Verifying : texlive-makeindex-7:20180414-25.fc30.i686 368/525 Verifying : texlive-metafont-7:20180414-25.fc30.i686 369/525 Verifying : texlive-mflogo-8:svn42428-21.fc30.noarch 370/525 Verifying : texlive-mfware-7:20180414-25.fc30.i686 371/525 Verifying : texlive-pdftex-7:20180414-25.fc30.i686 372/525 Verifying : texlive-plain-8:svn43076-21.fc30.noarch 373/525 Verifying : texlive-tex-7:20180414-25.fc30.i686 374/525 Verifying : texlive-tex-ini-files-8:svn40533-21.fc30.noarch 375/525 Verifying : texlive-texlive-common-doc-8:svn44191-21.fc30.no 376/525 Verifying : texlive-texlive-docindex-8:svn45575-21.fc30.noar 377/525 Verifying : texlive-texlive-en-7:20180414-25.fc30.noarch 378/525 Verifying : texlive-texlive-msg-translations-8:svn48373-21.f 379/525 Verifying : texlive-texlive-scripts-7:20180414-25.fc30.noarc 380/525 Verifying : texlive-texlive.infra-7:20180414-25.fc30.noarch 381/525 Verifying : texlive-unicode-data-8:svn48003-21.fc30.noarch 382/525 Verifying : texlive-updmap-map-8:svn48150-21.fc30.noarch 383/525 Verifying : texlive-xdvi-7:20180414-25.fc30.i686 384/525 Verifying : texlive-texconfig-7:20180414-25.fc30.noarch 385/525 Verifying : fontconfig-devel-2.13.1-1.fc30.i686 386/525 Verifying : freetype-devel-2.9.1-6.fc30.i686 387/525 Verifying : libXrender-devel-0.9.10-8.fc29.i686 388/525 Verifying : fontpackages-filesystem-1.44-22.fc29.noarch 389/525 Verifying : copy-jdk-configs-3.7-2.fc29.noarch 390/525 Verifying : javapackages-filesystem-5.3.0-2.fc30.noarch 391/525 Verifying : lksctp-tools-1.0.16-10.fc29.i686 392/525 Verifying : nspr-4.20.0-1.fc30.i686 393/525 Verifying : nss-3.39.0-3.fc30.i686 394/525 Verifying : nss-softokn-3.39.0-3.fc30.i686 395/525 Verifying : nss-util-3.39.0-2.fc30.i686 396/525 Verifying : tzdata-java-2018e-2.fc29.noarch 397/525 Verifying : ttmkfdir-3.0.9-55.fc29.i686 398/525 Verifying : xorg-x11-font-utils-1:7.5-40.fc29.i686 399/525 Verifying : sqlite-3.25.2-1.fc30.i686 400/525 Verifying : perl-Pod-Perldoc-3.28.01-418.fc29.noarch 401/525 Verifying : perl-Pod-Escapes-1:1.07-417.fc29.noarch 402/525 Verifying : libyaml-0.2.1-2.fc29.i686 403/525 Verifying : perl-Digest-MD5-2.55-417.fc29.i686 404/525 Verifying : texlive-parallel-8:svn15878.0-21.fc30.noarch 405/525 Verifying : texlive-qstest-8:svn15878.0-21.fc30.noarch 406/525 Verifying : texlive-sauerj-8:svn15878.0-21.fc30.noarch 407/525 Verifying : texlive-soul-8:svn15878.2.4-21.fc30.noarch 408/525 Verifying : texlive-beton-8:svn15878.0-21.fc30.noarch 409/525 Verifying : texlive-auto-pst-pdf-8:svn23723.0.6-21.fc30.noar 410/525 Verifying : texlive-bera-8:svn20031.0-21.fc30.noarch 411/525 Verifying : texlive-breakurl-8:svn29901.1.40-21.fc30.noarch 412/525 Verifying : texlive-chngcntr-8:svn47577-21.fc30.noarch 413/525 Verifying : texlive-filecontents-8:svn47890-21.fc30.noarch 414/525 Verifying : texlive-multido-8:svn18302.1.42-21.fc30.noarch 415/525 Verifying : texlive-paralist-8:svn43021-21.fc30.noarch 416/525 Verifying : texlive-pst-3d-8:svn17257.1.10-21.fc30.noarch 417/525 Verifying : texlive-pst-coil-8:svn37377.1.07-21.fc30.noarch 418/525 Verifying : texlive-pst-eps-8:svn15878.1.0-21.fc30.noarch 419/525 Verifying : texlive-pst-fill-8:svn15878.1.01-21.fc30.noarch 420/525 Verifying : texlive-pst-node-8:svn46170-21.fc30.noarch 421/525 Verifying : texlive-pst-plot-8:svn47163-21.fc30.noarch 422/525 Verifying : texlive-pst-tools-8:svn45978-21.fc30.noarch 423/525 Verifying : texlive-pst-tree-8:svn43272-21.fc30.noarch 424/525 Verifying : texlive-pstricks-add-8:svn46541-21.fc30.noarch 425/525 Verifying : texlive-showexpl-8:svn42677-21.fc30.noarch 426/525 Verifying : texlive-lualibs-8:svn43153-21.fc30.noarch 427/525 Verifying : poppler-0.67.0-2.fc30.i686 428/525 Verifying : zziplib-0.13.69-1.fc29.i686 429/525 Verifying : texlive-changepage-8:svn15878.1.0c-21.fc30.noarc 430/525 Verifying : texlive-placeins-8:svn19848.2.2-21.fc30.noarch 431/525 Verifying : texlive-titlesec-8:svn40129-21.fc30.noarch 432/525 Verifying : texlive-xifthen-8:svn38929-21.fc30.noarch 433/525 Verifying : libgs-9.25-1.fc30.i686 434/525 Verifying : libXau-1.0.8-14.fc29.i686 435/525 Verifying : avahi-glib-0.7-16.fc29.i686 436/525 Verifying : bc-1.07.1-6.fc29.i686 437/525 Verifying : cups-filters-libs-1.21.2-3.fc30.i686 438/525 Verifying : lcms2-2.9-4.fc30.i686 439/525 Verifying : liberation-mono-fonts-1:2.00.3-1.fc29.noarch 440/525 Verifying : poppler-utils-0.67.0-2.fc30.i686 441/525 Verifying : gnutls-3.6.4-5.fc30.i686 442/525 Verifying : dbus-daemon-1:1.12.10-6.fc30.i686 443/525 Verifying : cryptsetup-libs-2.0.5-1.fc30.i686 444/525 Verifying : iptables-libs-1.8.0-3.fc29.i686 445/525 Verifying : kmod-libs-25-4.fc30.i686 446/525 Verifying : libseccomp-2.3.3-3.fc29.i686 447/525 Verifying : qrencode-libs-3.4.4-6.fc29.i686 448/525 Verifying : systemd-pam-239-8.git9f3aed1.fc30.i686 449/525 Verifying : systemd-rpm-macros-239-8.git9f3aed1.fc30.noarch 450/525 Verifying : graphite2-1.3.10-6.fc30.i686 451/525 Verifying : libdatrie-0.2.9-8.fc29.i686 452/525 Verifying : glibc-headers-2.28.9000-13.fc30.i686 453/525 Verifying : libxcrypt-devel-4.2.3-1.fc30.i686 454/525 Verifying : perl-XML-Parser-2.44-13.fc29.i686 455/525 Verifying : perl-XML-XPath-1.44-1.fc30.noarch 456/525 Verifying : libXaw-1.0.13-11.fc29.i686 457/525 Verifying : libXpm-3.5.12-8.fc29.i686 458/525 Verifying : gettext-0.19.8.1-17.fc29.i686 459/525 Verifying : libuuid-devel-2.33-0.1.fc30.i686 460/525 Verifying : libpng-devel-2:1.6.35-1.fc30.i686 461/525 Verifying : lua-5.3.5-2.fc29.i686 462/525 Verifying : lua-posix-33.3.1-11.fc29.i686 463/525 Verifying : nss-sysinit-3.39.0-3.fc30.i686 464/525 Verifying : nss-softokn-freebl-3.39.0-3.fc30.i686 465/525 Verifying : libfontenc-1.1.3-9.fc29.i686 466/525 Verifying : groff-base-1.22.3-17.fc29.i686 467/525 Verifying : perl-HTTP-Tiny-0.076-1.fc29.noarch 468/525 Verifying : perl-Digest-1.17-417.fc29.noarch 469/525 Verifying : texlive-ifplatform-8:svn45533-21.fc30.noarch 470/525 Verifying : texlive-pst-pdf-7:20180414-25.fc30.noarch 471/525 Verifying : texlive-pst-math-8:svn34786.0.63-21.fc30.noarch 472/525 Verifying : texlive-attachfile-8:svn42099-21.fc30.noarch 473/525 Verifying : texlive-varwidth-8:svn24104.0.92-21.fc30.noarch 474/525 Verifying : openjpeg2-2.3.0-9.fc30.i686 475/525 Verifying : poppler-data-0.4.9-2.fc29.noarch 476/525 Verifying : texlive-ifmtarg-8:svn47544-21.fc30.noarch 477/525 Verifying : adobe-mappings-cmap-20171205-4.fc29.noarch 478/525 Verifying : adobe-mappings-cmap-deprecated-20171205-4.fc29.n 479/525 Verifying : adobe-mappings-pdf-20180407-2.fc29.noarch 480/525 Verifying : google-droid-sans-fonts-20120715-14.fc29.noarch 481/525 Verifying : jbig2dec-libs-0.14-3.fc29.i686 482/525 Verifying : libidn-1.35-3.fc29.i686 483/525 Verifying : libijs-0.35-8.fc29.i686 484/525 Verifying : libpaper-1.1.24-22.fc29.i686 485/525 Verifying : urw-base35-fonts-20170801-11.fc29.noarch 486/525 Verifying : liberation-fonts-common-1:2.00.3-1.fc29.noarch 487/525 Verifying : nettle-3.4-7.fc30.i686 488/525 Verifying : dbus-common-1:1.12.10-6.fc30.noarch 489/525 Verifying : dbus-tools-1:1.12.10-6.fc30.i686 490/525 Verifying : device-mapper-libs-1.02.152-1.fc30.i686 491/525 Verifying : json-c-0.13.1-3.fc29.i686 492/525 Verifying : libargon2-20161029-6.fc29.i686 493/525 Verifying : libpcap-14:1.9.0-2.fc29.i686 494/525 Verifying : kernel-headers-4.20.0-0.rc1.git0.1.fc30.i686 495/525 Verifying : perl-open-1.11-425.fc30.noarch 496/525 Verifying : gettext-libs-0.19.8.1-17.fc29.i686 497/525 Verifying : libcroco-0.6.12-5.fc29.i686 498/525 Verifying : perl-Time-Local-2:1.280-3.fc29.noarch 499/525 Verifying : texlive-environ-8:svn33821.0.3-21.fc30.noarch 500/525 Verifying : urw-base35-bookman-fonts-20170801-11.fc29.noarch 501/525 Verifying : urw-base35-c059-fonts-20170801-11.fc29.noarch 502/525 Verifying : urw-base35-d050000l-fonts-20170801-11.fc29.noarc 503/525 Verifying : urw-base35-fonts-common-20170801-11.fc29.noarch 504/525 Verifying : urw-base35-gothic-fonts-20170801-11.fc29.noarch 505/525 Verifying : urw-base35-nimbus-mono-ps-fonts-20170801-11.fc29 506/525 Verifying : urw-base35-nimbus-roman-fonts-20170801-11.fc29.n 507/525 Verifying : urw-base35-nimbus-sans-fonts-20170801-11.fc29.no 508/525 Verifying : urw-base35-p052-fonts-20170801-11.fc29.noarch 509/525 Verifying : urw-base35-standard-symbols-ps-fonts-20170801-11 510/525 Verifying : urw-base35-z003-fonts-20170801-11.fc29.noarch 511/525 Verifying : device-mapper-1.02.152-1.fc30.i686 512/525 Verifying : perl-encoding-4:2.22-6.fc29.i686 513/525 Verifying : texlive-trimspaces-8:svn15878.1.1-21.fc30.noarch 514/525 Verifying : xorg-x11-server-utils-7.7-27.fc30.i686 515/525 Verifying : perl-Filter-2:1.59-1.fc29.i686 516/525 Verifying : libXcursor-1.1.15-4.fc29.i686 517/525 Verifying : libXinerama-1.1.4-2.fc29.i686 518/525 Verifying : libXrandr-1.5.1-8.fc29.i686 519/525 Verifying : libXxf86misc-1.0.4-2.fc29.i686 520/525 Verifying : libXxf86vm-1.1.4-10.fc29.i686 521/525 Verifying : mcpp-2.7.2-21.fc29.i686 522/525 Verifying : libXfixes-5.0.3-8.fc29.i686 523/525 Verifying : libmcpp-2.7.2-21.fc29.i686 524/525 Verifying : annobin-8.59-1.fc30.i686 525/525 Installed: R-core-devel.i686 3.5.1-1.fc30 R-devel.i686 3.5.1-1.fc30 bzip2-devel.i686 1.0.6-28.fc29 check-devel.i686 0.12.0-3.fc29 cmake.i686 3.12.2-1.fc30 expat-devel.i686 2.2.6-1.fc30 java-1.8.0-openjdk-devel.i686 1:1.8.0.191.b12-8.fc30 libnuml-devel.i686 1.1.1-14.fc30 libsbml-devel.i686 5.17.0-10.fc30 libxml2-devel.i686 2.9.8-4.fc29 mono-core.i686 4.8.0-12.fc28 perl-ExtUtils-MakeMaker.noarch 1:7.34-418.fc29 perl-Test-Simple.noarch 2:1.302140-1.fc29 perl-devel.i686 4:5.28.0-425.fc30 perl-generators.noarch 1.10-10.fc29 perl-interpreter.i686 4:5.28.0-425.fc30 python3-devel.i686 3.7.1-2.fc30 ruby-devel.i686 2.5.3-101.fc30 swig.i686 3.0.12-21.fc29 texlive-collection-latexrecommended.noarch 8:svn45955-21.fc30 xerces-c-devel.i686 3.2.2-1.fc30 zlib-devel.i686 1.2.11-14.fc30 R-core.i686 3.5.1-1.fc30 R-java-devel.i686 3.5.1-1.fc30 acl.i686 2.2.53-2.fc29 adobe-mappings-cmap.noarch 20171205-4.fc29 adobe-mappings-cmap-deprecated.noarch 20171205-4.fc29 adobe-mappings-pdf.noarch 20180407-2.fc29 alsa-lib.i686 1.1.7-2.fc30 annobin.i686 8.59-1.fc30 avahi-glib.i686 0.7-16.fc29 avahi-libs.i686 0.7-16.fc29 bc.i686 1.07.1-6.fc29 cairo.i686 1.16.0-1.fc30 check.i686 0.12.0-3.fc29 cmake-data.noarch 3.12.2-1.fc30 cmake-filesystem.i686 3.12.2-1.fc30 cmake-rpm-macros.noarch 3.12.2-1.fc30 copy-jdk-configs.noarch 3.7-2.fc29 cpp.i686 8.2.1-4.fc30 cryptsetup-libs.i686 2.0.5-1.fc30 cups.i686 1:2.2.8-5.fc30 cups-client.i686 1:2.2.8-5.fc30 cups-filesystem.noarch 1:2.2.8-5.fc30 cups-filters.i686 1.21.2-3.fc30 cups-filters-libs.i686 1.21.2-3.fc30 cups-libs.i686 1:2.2.8-5.fc30 dbus.i686 1:1.12.10-6.fc30 dbus-common.noarch 1:1.12.10-6.fc30 dbus-daemon.i686 1:1.12.10-6.fc30 dbus-libs.i686 1:1.12.10-6.fc30 dbus-tools.i686 1:1.12.10-6.fc30 desktop-file-utils.i686 0.23-9.fc29 device-mapper.i686 1.02.152-1.fc30 device-mapper-libs.i686 1.02.152-1.fc30 emacs-filesystem.noarch 1:26.1-7.fc30 fontconfig.i686 2.13.1-1.fc30 fontconfig-devel.i686 2.13.1-1.fc30 fontpackages-filesystem.noarch 1.44-22.fc29 freetype.i686 2.9.1-6.fc30 freetype-devel.i686 2.9.1-6.fc30 fribidi.i686 1.0.5-1.fc29 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8:svn21820.0-21.fc30 texlive-typehtml.noarch 8:svn17134.0-21.fc30 texlive-ucharcat.noarch 8:svn38907-21.fc30 texlive-ucs.noarch 8:svn35853.2.2-21.fc30 texlive-underscore.noarch 8:svn18261.0-21.fc30 texlive-unicode-data.noarch 8:svn48003-21.fc30 texlive-unicode-math.noarch 8:svn48309-21.fc30 texlive-updmap-map.noarch 8:svn48150-21.fc30 texlive-url.noarch 8:svn32528.3.4-21.fc30 texlive-utopia.noarch 8:svn15878.0-21.fc30 texlive-varwidth.noarch 8:svn24104.0.92-21.fc30 texlive-wasy.noarch 8:svn35831.0-21.fc30 texlive-wasy2-ps.noarch 8:svn35830.0-21.fc30 texlive-wasysym.noarch 8:svn15878.2.0-21.fc30 texlive-xcolor.noarch 8:svn41044-21.fc30 texlive-xdvi.i686 7:20180414-25.fc30 texlive-xifthen.noarch 8:svn38929-21.fc30 texlive-xkeyval.noarch 8:svn35741.2.7a-21.fc30 texlive-xltxtra.noarch 8:svn39453-21.fc30 texlive-xunicode.noarch 8:svn30466.0.981-21.fc30 texlive-zapfchan.noarch 8:svn31835.0-21.fc30 texlive-zapfding.noarch 8:svn31835.0-21.fc30 tk.i686 1:8.6.8-1.fc29 tk-devel.i686 1:8.6.8-1.fc29 tre.i686 0.8.0-23.20140228gitc2f5d13.fc29 tre-common.noarch 0.8.0-23.20140228gitc2f5d13.fc29 tre-devel.i686 0.8.0-23.20140228gitc2f5d13.fc29 ttmkfdir.i686 3.0.9-55.fc29 tzdata-java.noarch 2018e-2.fc29 urw-base35-bookman-fonts.noarch 20170801-11.fc29 urw-base35-c059-fonts.noarch 20170801-11.fc29 urw-base35-d050000l-fonts.noarch 20170801-11.fc29 urw-base35-fonts.noarch 20170801-11.fc29 urw-base35-fonts-common.noarch 20170801-11.fc29 urw-base35-gothic-fonts.noarch 20170801-11.fc29 urw-base35-nimbus-mono-ps-fonts.noarch 20170801-11.fc29 urw-base35-nimbus-roman-fonts.noarch 20170801-11.fc29 urw-base35-nimbus-sans-fonts.noarch 20170801-11.fc29 urw-base35-p052-fonts.noarch 20170801-11.fc29 urw-base35-standard-symbols-ps-fonts.noarch 20170801-11.fc29 urw-base35-z003-fonts.noarch 20170801-11.fc29 vim-minimal.i686 2:8.1.511-1.fc30 xdg-utils.noarch 1.1.3-3.fc29 xerces-c.i686 3.2.2-1.fc30 xorg-x11-font-utils.i686 1:7.5-40.fc29 xorg-x11-fonts-Type1.noarch 7.5-20.fc29 xorg-x11-proto-devel.noarch 2018.4-2.fc29 xorg-x11-server-utils.i686 7.7-27.fc30 xz-devel.i686 5.2.4-3.fc29 zziplib.i686 0.13.69-1.fc29 Complete! Finish: build setup for libsedml-0.4.3-19.fc30.src.rpm Start: rpmbuild libsedml-0.4.3-19.fc30.src.rpm Building target platforms: i686 Building for target i686 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.raezET + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSEDML-0.4.3 + /usr/bin/gzip -dc /builddir/build/SOURCES/libSEDML-0.4.3.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libSEDML-0.4.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (libsedml-fix_install_libpaths.patch):' Patch #0 (libsedml-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 766 (offset 54 lines). patching file bindings/ruby/CMakeLists.txt Hunk #1 succeeded at 130 (offset 14 lines). patching file bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 132 (offset 6 lines). patching file bindings/perl/CMakeLists.txt Hunk #1 succeeded at 117 (offset 4 lines). patching file bindings/java/CMakeLists.txt Hunk #1 succeeded at 93 (offset 9 lines). patching file bindings/r/CMakeLists.txt Hunk #1 succeeded at 222 (offset 14 lines). + sed -e 's| lib/cmake | lib/cmake |g' -i CMakeLists.txt + sed -e 's| /usr/lib/cmake | /usr/lib/cmake |g' -i CMakeModules/FindLIBNUML.cmake + sed -e 's| /usr/lib/cmake | /usr/lib/cmake |g' -i CMakeModules/FindLIBSBML.cmake + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.35SHsw + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + mkdir build2 + pushd build2 ~/build/BUILD/libSEDML-0.4.3/build2 ~/build/BUILD/libSEDML-0.4.3 + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' ++ sed -e s/-Werror=format-security/-Wno-error=unused-value/g ++ echo '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + SEDMLOPT_FLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.7m -DPYTHON_LIBRARY:FILEPATH=/usr/lib/libpython3.7m.so -DWITH_JAVA:BOOL=OFF -DWITH_SWIG:BOOL=OFF -DWITH_PERL:BOOL=OFF -DWITH_RUBY:BOOL=OFF -DWITH_R:BOOL=OFF -DR_INCLUDE_DIRS:PATH=/usr/include/R -DWITH_CSHARP:BOOL=OFF -DWITH_SWIG:BOOL=OFF -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF -DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES .. -- The C compiler identification is GNU 8.2.1 -- The CXX compiler identification is GNU 8.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Looking for sbml-static -- Found LIBSBML: sbml-static -- Looking for numl-static -- Found LIBNUML: numl-static -- Looking for gzopen in /usr/lib/libz.so -- Looking for gzopen in /usr/lib/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Found PythonInterp: /usr/bin/python3 (found version "3.7.1") -- Found PythonLibs: /usr/lib/libpython3.7m.so (found version "3.7.1") -- ---------------------------------------------------------------------- libSEDML version 0.4.3 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 4.16.13-300.fc28.x86_64 host CPU architecture = i686 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="0.4.3" -DPACKAGE_NAME="libsedml" CFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread SBML library configuration: SBML library = /usr/lib/libsbml-static.a SBML include = -I/usr/include NUML library configuration: NUML library = /lib/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using Python = /usr/bin/python3 -- Using libcheck = /usr/lib/libcheck.so -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_SKIP_INSTALL_RPATH CSHARP_COMPILER INCLUDE_INSTALL_DIR LIBSBML_STATIC LIB_INSTALL_DIR R_INCLUDE_DIRS SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSEDML-0.4.3/build2 + /usr/bin/make -O -j2 /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build2 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= Scanning dependencies of target sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= Scanning dependencies of target sedml-static make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 2%] Building CXX object sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 2%] Building CXX object sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 3%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 4%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 5%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 6%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 7%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] bool sedmlDeclared = false; ^~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 8%] Building CXX object sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] bool sedmlDeclared = false; ^~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 10%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 11%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 11%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 12%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 13%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 14%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 15%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 16%] Building CXX object sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 18%] Building CXX object sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 19%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 19%] Building CXX object sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 21%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 22%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 23%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 24%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 25%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 26%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 27%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 28%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 27%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 29%] Building CXX object sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 30%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 31%] Building CXX object sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 32%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 32%] Building CXX object sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 33%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 34%] Building CXX object sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 35%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 37%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 39%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 41%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 42%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 44%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 45%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 46%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 48%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 49%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 51%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 52%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 54%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 55%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 58%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 57%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 58%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 59%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 60%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 62%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 64%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 65%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 66%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 67%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 68%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 70%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 69%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 72%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 71%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 73%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 74%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 74%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 75%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 77%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 76%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 77%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 78%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 79%] Building CXX object sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 80%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 82%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 83%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml-static.dir/SedBase.cpp.o CMakeFiles/sedml-static.dir/SedChange.cpp.o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o CMakeFiles/sedml-static.dir/SedCurve.cpp.o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o CMakeFiles/sedml-static.dir/SedDocument.cpp.o CMakeFiles/sedml-static.dir/SedError.cpp.o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o 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CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml-static.dir/SedVariable.cpp.o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o CMakeFiles/sedml-static.dir/SedWriter.cpp.o /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 83%] Built target sedml-static make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 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CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o /usr/lib/libsbml-static.a -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl -lbz2 -lz -lxml2 cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.0.4.3 libsedml.so.0 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 84%] Built target sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 85%] Building C object examples/c/CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB 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directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 86%] Built target example_c_echo_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make 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-specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 88%] Built target example_c_create_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/print_sedml.c make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 89%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions 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examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 90%] Building CXX object examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/echo_sedml.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 91%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 91%] Built target example_cpp_echo_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 92%] Building CXX object examples/c++/CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/create_sedml.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 93%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 93%] Built target example_cpp_create_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 94%] Building CXX object examples/c++/CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/print_sedml.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 95%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 95%] Built target example_cpp_print_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/tests /builddir/build/BUILD/libSEDML-0.4.3/build2/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 96%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build2 -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestIssues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 97%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build2 -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestRunner.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 98%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../sedml/libsedml-static.a -lcheck -Wl,-Bstatic -lsbml-static -Wl,-Bdynamic -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 98%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 84%] Swig Python source cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/libsedml.i cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python" -DVERSION="0.4.3" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/add_version.cmake /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. Python: Add Version to generated file make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 98%] Built target binding_python_swig make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 99%] Building CXX object bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig -I/usr/include/python3.7m -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp: In instantiation of 'static Type swig::traits_as::as(PyObject*, bool) [with Type = SedError; PyObject = _object]': /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:4795:64: required from 'Type swig::as(PyObject*, bool) [with Type = SedError; PyObject = _object]' /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5434:20: required from 'swig::SwigPySequence_Ref::operator T() const [with T = SedError]' /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5800:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont; Seq = std::vector]' /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5822:12: required from 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector; T = SedError; PyObject = _object; swig::traits_asptr_stdseq::sequence = std::vector]' /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5883:52: required from 'static int swig::traits_asptr >::asptr(PyObject*, std::vector**) [with T = SedError; PyObject = _object]' /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:4687:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector; PyObject = _object]' /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:18783:34: required from here /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:4770:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class SedError' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset(v_def,0,sizeof(Type)); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedErrorLog.h:83, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedBase.h:154, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedVariable.h:51, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedTypes.h:44, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig/libsedml.h:31, from /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:3773: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedError.h:969:23: note: 'class SedError' declared here class LIBSEDML_EXTERN SedError : public XMLError ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [100%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lpython3.7m /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [100%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles 0 + popd ~/build/BUILD/libSEDML-0.4.3 + mkdir build + pushd build ~/build/BUILD/libSEDML-0.4.3/build ~/build/BUILD/libSEDML-0.4.3 + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' ++ echo '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' ++ sed -e s/-Werror=format-security/-Wno-error=unused-value/g + SEDMLOPT_FLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export 'CFLAGS=-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export 'CXXFLAGS=-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CXXFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DWITH_JAVA:BOOL=ON -DWITH_SWIG:BOOL=ON -DWITH_PERL:BOOL=ON -DWITH_RUBY:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DWITH_CSHARP:BOOL=ON -DWITH_SWIG:BOOL=ON -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF -DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES .. -- The C compiler identification is GNU 8.2.1 -- The CXX compiler identification is GNU 8.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Looking for sbml-static -- Found LIBSBML: sbml-static -- Looking for numl-static -- Found LIBNUML: numl-static -- Looking for gzopen in /usr/lib/libz.so -- Looking for gzopen in /usr/lib/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Found JNI: /usr/lib/jvm/jre/lib/i386/libjawt.so -- Found Java: /usr/bin/java (found version "1.8.0.191") found components: Development -- Found Perl: /usr/bin/perl (found version "5.28.0") -- Found PerlLibs: /usr/lib/libperl.so (found version "5.28.0") -- Found Ruby: /usr/bin/ruby (found version "2.5.3") -- ---------------------------------------------------------------------- libSEDML version 0.4.3 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 4.16.13-300.fc28.x86_64 host CPU architecture = i686 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="0.4.3" -DPACKAGE_NAME="libsedml" CFLAGS = -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread SBML library configuration: SBML library = /usr/lib/libsbml-static.a SBML include = -I/usr/include NUML library configuration: NUML library = /lib/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig -- Using C# = /usr/bin/mcs -- Using Java = /usr/bin/java -- Using Perl = /usr/bin/perl -- Using Ruby = /usr/bin/ruby -- Using libcheck = /usr/lib/libcheck.so -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_SKIP_INSTALL_RPATH INCLUDE_INSTALL_DIR LIBSBML_STATIC LIB_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSEDML-0.4.3/build + make -j1 /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= Scanning dependencies of target sedml-static make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 1%] Building CXX object sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp [ 1%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp [ 2%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] bool sedmlDeclared = false; ^~~~~~~~~~~~~ [ 4%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp [ 5%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp [ 7%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp [ 8%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp [ 8%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp [ 10%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp [ 11%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp [ 11%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp [ 13%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp [ 13%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp [ 15%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp [ 16%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp [ 16%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp [ 18%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp [ 18%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ [ 19%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp [ 21%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp [ 21%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp [ 22%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp [ 24%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ [ 26%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp [ 26%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp [ 27%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp [ 29%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp [ 30%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp [ 32%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp [ 33%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp [ 33%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml-static.dir/SedBase.cpp.o CMakeFiles/sedml-static.dir/SedChange.cpp.o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o CMakeFiles/sedml-static.dir/SedCurve.cpp.o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o CMakeFiles/sedml-static.dir/SedDocument.cpp.o CMakeFiles/sedml-static.dir/SedError.cpp.o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml-static.dir/SedListOf.cpp.o CMakeFiles/sedml-static.dir/SedModel.cpp.o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o CMakeFiles/sedml-static.dir/SedOutput.cpp.o CMakeFiles/sedml-static.dir/SedParameter.cpp.o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o CMakeFiles/sedml-static.dir/SedRange.cpp.o CMakeFiles/sedml-static.dir/SedReader.cpp.o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml-static.dir/SedReport.cpp.o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o CMakeFiles/sedml-static.dir/SedSlice.cpp.o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o CMakeFiles/sedml-static.dir/SedSurface.cpp.o CMakeFiles/sedml-static.dir/SedTask.cpp.o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml-static.dir/SedVariable.cpp.o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o CMakeFiles/sedml-static.dir/SedWriter.cpp.o /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 33%] Built target sedml-static make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= Scanning dependencies of target sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 34%] Building CXX object sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp [ 35%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp [ 35%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp [ 37%] Building CXX object sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] bool sedmlDeclared = false; ^~~~~~~~~~~~~ [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp [ 41%] Building CXX object sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp [ 45%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ [ 45%] Building CXX object sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp [ 46%] Building CXX object sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp [ 49%] Building CXX object sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp [ 51%] Building CXX object sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp [ 52%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp [ 54%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp [ 55%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp [ 55%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp [ 57%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp [ 59%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ [ 60%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp [ 60%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] const string& name = stream.peek().getName(); ^~~~ [ 62%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp [ 65%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp [ 65%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp [ 66%] Building CXX object sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp [ 67%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libsedml.so.0 -o libsedml.so.0.4.3 CMakeFiles/sedml.dir/common/libsedml-version.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o /usr/lib/libsbml-static.a -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl -lbz2 -lz -lxml2 cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.0.4.3 libsedml.so.0 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 67%] Built target sedml make -f bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_csharp_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 67%] Built target binding_csharp_swig make -f bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 68%] Swig C# source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp && /usr/bin/cmake -E remove_directory /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/csharp-files cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/csharp-files cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp && /usr/bin/swig -I/usr/share/swig/3.0.12/csharp -I/usr/share/swig/3.0.12/std -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp -I/usr/include/ -I/usr/include/ -c++ -csharp -namespace libsedmlcs -dllimport libsedmlcs -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -outdir /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/csharp-files -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../swig/libsedml.i /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/xml/XMLInputStream.h:326: Warning 844: C# exception may not be thrown - no $excode or excode attribute in 'csout' typemap. /usr/include/sbml/xml/XMLInputStream.h:353: Warning 844: C# exception may not be thrown - no $excode or excode attribute in 'csout' typemap. cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_csharp_native_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 68%] Building CXX object bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_csharp_native_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_csharp_native_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/libsedml_wrap.cpp [ 69%] Linking CXX shared library libsedmlcs.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_csharp_native_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libsedmlcs.so -o libsedmlcs.so CMakeFiles/binding_csharp_native_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 69%] Built target binding_csharp_native_lib make -f bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_csharp_managed_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 69%] Build csharp files cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp && /usr/bin/cmake -DCSHARP_EXTRA_ARGS="" -DCSHARP_COMPILER="/usr/bin/mcs" -DBIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp" -DSRC_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp/compile-native-files.cmake Creating: libsedmlcsP.dll Creating: TestRunner.exe make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Built target binding_csharp_managed_lib make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Swig Java source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/java-files/org/sedml/libsedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java -I/usr/include/ -I/usr/include/ -c++ -java -package org.sedml.libsedml -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -outdir /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/java-files/org/sedml/libsedml -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../swig/libsedml.i /builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Built target binding_java_swig make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 71%] Building CXX object bindings/java/CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_java_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../swig -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/libsedml_wrap.cpp [ 72%] Linking CXX shared library libsedmlj.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_java_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libsedmlj.so -o libsedmlj.so CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 72%] Built target binding_java_lib make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_jar make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 73%] Building: libsedml.jar cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/test cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -DJava_JAVAC_EXECUTABLE="/usr/bin/javac" -DJava_JAR_EXECUTABLE="/usr/bin/jar" -DBIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java" -DSRC_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/bindings/java" -DFILE_SEP=":" -DPATH_SEP=/ -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/java/compile-native-files.cmake Creating: libsedml.jar warning: [options] bootstrap class path not set in conjunction with -source 1.5 warning: [options] source value 1.5 is obsolete and will be removed in a future release warning: [options] target value 1.5 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. 4 warnings added manifest adding: org/sedml/libsedml/ASTNode.class(in = 16585) (out= 4861)(deflated 70%) adding: org/sedml/libsedml/ASTNodeList.class(in = 1542) (out= 711)(deflated 53%) adding: org/sedml/libsedml/AtomicDescription.class(in = 2776) (out= 1078)(deflated 61%) adding: org/sedml/libsedml/AtomicValue.class(in = 2512) (out= 1047)(deflated 58%) adding: org/sedml/libsedml/CVTerm.class(in = 4674) (out= 1650)(deflated 64%) adding: org/sedml/libsedml/CVTermList.class(in = 1524) (out= 711)(deflated 53%) adding: org/sedml/libsedml/CompositeDescription.class(in = 4937) (out= 1542)(deflated 68%) adding: org/sedml/libsedml/CompositeValue.class(in = 5054) (out= 1641)(deflated 67%) adding: org/sedml/libsedml/Date.class(in = 4765) (out= 1770)(deflated 62%) adding: org/sedml/libsedml/DateList.class(in = 1488) (out= 708)(deflated 52%) adding: org/sedml/libsedml/Dimension.class(in = 3157) (out= 1211)(deflated 61%) adding: org/sedml/libsedml/DimensionDescription.class(in = 3942) (out= 1334)(deflated 66%) adding: org/sedml/libsedml/DoubleStdVector.class(in = 2036) (out= 867)(deflated 57%) adding: org/sedml/libsedml/L3ParserSettings.class(in = 5557) (out= 1722)(deflated 69%) adding: org/sedml/libsedml/MathML.class(in = 1254) (out= 661)(deflated 47%) adding: org/sedml/libsedml/Model.class(in = 37837) (out= 9567)(deflated 74%) adding: org/sedml/libsedml/ModelCreatorList.class(in = 1641) (out= 724)(deflated 55%) adding: org/sedml/libsedml/NMBase.class(in = 8128) (out= 2445)(deflated 69%) adding: org/sedml/libsedml/NUMLConstructorException.class(in = 907) (out= 533)(deflated 41%) adding: org/sedml/libsedml/NUMLDocument.class(in = 5377) (out= 1842)(deflated 65%) adding: org/sedml/libsedml/NUMLError.class(in = 2275) (out= 973)(deflated 57%) adding: org/sedml/libsedml/NUMLErrorLog.class(in = 3518) (out= 1258)(deflated 64%) adding: org/sedml/libsedml/NUMLList.class(in = 3371) (out= 1277)(deflated 62%) adding: org/sedml/libsedml/NUMLNamespaces.class(in = 2601) (out= 1042)(deflated 59%) adding: org/sedml/libsedml/NUMLReader.class(in = 1654) (out= 797)(deflated 51%) adding: org/sedml/libsedml/NUMLWriter.class(in = 2479) (out= 999)(deflated 59%) adding: org/sedml/libsedml/OFStream.class(in = 1712) (out= 794)(deflated 53%) adding: org/sedml/libsedml/ONTOLOGY.class(in = 1578) (out= 742)(deflated 52%) adding: org/sedml/libsedml/OStream.class(in = 1404) (out= 751)(deflated 46%) adding: org/sedml/libsedml/OStringStream.class(in = 1247) (out= 646)(deflated 48%) adding: org/sedml/libsedml/OntologyTerm.class(in = 3203) (out= 1183)(deflated 63%) adding: org/sedml/libsedml/OntologyTerms.class(in = 2231) (out= 942)(deflated 57%) adding: org/sedml/libsedml/ResultComponent.class(in = 5580) (out= 1760)(deflated 68%) adding: org/sedml/libsedml/ResultComponents.class(in = 2478) (out= 984)(deflated 60%) adding: org/sedml/libsedml/SBMLNamespaces.class(in = 5735) (out= 1810)(deflated 68%) adding: org/sedml/libsedml/SBase.class(in = 20837) (out= 5676)(deflated 72%) adding: org/sedml/libsedml/SBaseList.class(in = 1506) (out= 710)(deflated 52%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTBasePlugin.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTNodeType_t.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AlgebraicRule.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AssignmentRule.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Compartment.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_CompartmentType.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Constraint.class(in = 454) (out= 297)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Delay.class(in = 439) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ElementFilter.class(in = 463) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Event.class(in = 439) (out= 291)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_EventAssignment.class(in = 469) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_FormulaUnitsData.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_FunctionDefinition.class(in = 478) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_IdList.class(in = 442) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_IdentifierTransformer.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_InitialAssignment.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_KineticLaw.class(in = 454) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_L3ParserSettings_t.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_List.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartmentTypes.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartments.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfConstraints.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfEvents.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfFunctionDefinitions.class(in = 499) (out= 308)(deflated 38%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfInitialAssignments.class(in = 496) (out= 308)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfParameters.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfReactions.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfRules.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpecies.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpeciesTypes.class(in = 478) (out= 305)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfUnitDefinitions.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_LocalParameter.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelCreator.class(in = 460) (out= 297)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelHistory.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Model_t.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ModifierSpeciesReference.class(in = 496) (out= 309)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_NUMLDocument_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Parameter.class(in = 451) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_RateRule.class(in = 448) (out= 296)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_Reaction.class(in = 448) (out= 295)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Rule.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLDocument.class(in = 460) (out= 300)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLNamespaces_t.class(in = 472) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_SBasePlugin.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Species.class(in = 445) (out= 293)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesReference.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesType.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_StringBuffer_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Trigger.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Unit.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_UnitDefinition.class(in = 466) (out= 298)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_XMLNamespaces_t.class(in = 469) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_NUMLError_t.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_SedError_t.class(in = 487) (out= 306)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_std__ostream.class(in = 460) (out= 298)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_void.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SedAddXML.class(in = 3052) (out= 1178)(deflated 61%) adding: org/sedml/libsedml/SedAlgorithm.class(in = 5218) (out= 1678)(deflated 67%) adding: org/sedml/libsedml/SedAlgorithmParameter.class(in = 3901) (out= 1324)(deflated 66%) adding: org/sedml/libsedml/SedBase.class(in = 11106) (out= 3182)(deflated 71%) adding: org/sedml/libsedml/SedBaseList.class(in = 1542) (out= 711)(deflated 53%) adding: org/sedml/libsedml/SedChange.class(in = 2976) (out= 1161)(deflated 60%) adding: org/sedml/libsedml/SedChangeAttribute.class(in = 3139) (out= 1144)(deflated 63%) adding: org/sedml/libsedml/SedChangeXML.class(in = 3130) (out= 1182)(deflated 62%) adding: org/sedml/libsedml/SedComputeChange.class(in = 6494) (out= 1979)(deflated 69%) adding: org/sedml/libsedml/SedConstructorException.class(in = 1814) (out= 799)(deflated 55%) adding: org/sedml/libsedml/SedCurve.class(in = 6857) (out= 2128)(deflated 68%) adding: org/sedml/libsedml/SedDataDescription.class(in = 7186) (out= 2093)(deflated 70%) adding: org/sedml/libsedml/SedDataGenerator.class(in = 7332) (out= 2184)(deflated 70%) adding: org/sedml/libsedml/SedDataSet.class(in = 4044) (out= 1428)(deflated 64%) adding: org/sedml/libsedml/SedDataSource.class(in = 5443) (out= 1774)(deflated 67%) adding: org/sedml/libsedml/SedDocument.class(in = 13881) (out= 3844)(deflated 72%) adding: org/sedml/libsedml/SedError.class(in = 2506) (out= 984)(deflated 60%) adding: org/sedml/libsedml/SedErrorLog.class(in = 6205) (out= 1819)(deflated 70%) adding: org/sedml/libsedml/SedErrorStdVector.class(in = 2319) (out= 928)(deflated 59%) adding: org/sedml/libsedml/SedFunctionalRange.class(in = 7080) (out= 2103)(deflated 70%) adding: org/sedml/libsedml/SedListOf.class(in = 4476) (out= 1567)(deflated 64%) adding: org/sedml/libsedml/SedListOfAlgorithmParameters.class(in = 3747) (out= 1228)(deflated 67%) adding: org/sedml/libsedml/SedListOfChanges.class(in = 4289) (out= 1499)(deflated 65%) adding: org/sedml/libsedml/SedListOfCurves.class(in = 3253) (out= 1198)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataDescriptions.class(in = 3633) (out= 1219)(deflated 66%) adding: org/sedml/libsedml/SedListOfDataGenerators.class(in = 3557) (out= 1215)(deflated 65%) adding: org/sedml/libsedml/SedListOfDataSets.class(in = 3329) (out= 1205)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataSources.class(in = 3443) (out= 1207)(deflated 64%) adding: org/sedml/libsedml/SedListOfFunctionalRanges.class(in = 3633) (out= 1217)(deflated 66%) adding: org/sedml/libsedml/SedListOfModels.class(in = 3253) (out= 1198)(deflated 63%) adding: org/sedml/libsedml/SedListOfOutputs.class(in = 3797) (out= 1372)(deflated 63%) adding: org/sedml/libsedml/SedListOfParameters.class(in = 3405) (out= 1207)(deflated 64%) adding: org/sedml/libsedml/SedListOfRanges.class(in = 3824) (out= 1375)(deflated 64%) adding: org/sedml/libsedml/SedListOfSimulations.class(in = 3997) (out= 1391)(deflated 65%) adding: org/sedml/libsedml/SedListOfSlices.class(in = 3253) (out= 1198)(deflated 63%) adding: org/sedml/libsedml/SedListOfSubTasks.class(in = 3329) (out= 1204)(deflated 63%) adding: org/sedml/libsedml/SedListOfSurfaces.class(in = 3329) (out= 1204)(deflated 63%) adding: org/sedml/libsedml/SedListOfTaskChanges.class(in = 3419) (out= 1206)(deflated 64%) adding: org/sedml/libsedml/SedListOfTasks.class(in = 3475) (out= 1291)(deflated 62%) adding: org/sedml/libsedml/SedListOfVariables.class(in = 3367) (out= 1199)(deflated 64%) adding: org/sedml/libsedml/SedModel.class(in = 6561) (out= 2170)(deflated 66%) adding: org/sedml/libsedml/SedNamespaces.class(in = 3807) (out= 1366)(deflated 64%) adding: org/sedml/libsedml/SedNamespacesList.class(in = 1650) (out= 719)(deflated 56%) adding: org/sedml/libsedml/SedOneStep.class(in = 2913) (out= 1158)(deflated 60%) adding: org/sedml/libsedml/SedOutput.class(in = 3554) (out= 1327)(deflated 62%) adding: org/sedml/libsedml/SedParameter.class(in = 3773) (out= 1365)(deflated 63%) adding: org/sedml/libsedml/SedPlot2D.class(in = 4846) (out= 1673)(deflated 65%) adding: org/sedml/libsedml/SedPlot3D.class(in = 4133) (out= 1471)(deflated 64%) adding: org/sedml/libsedml/SedRange.class(in = 2914) (out= 1154)(deflated 60%) adding: org/sedml/libsedml/SedReader.class(in = 1647) (out= 793)(deflated 51%) adding: org/sedml/libsedml/SedRemoveXML.class(in = 2500) (out= 1034)(deflated 58%) adding: org/sedml/libsedml/SedRepeatedTask.class(in = 8699) (out= 2552)(deflated 70%) adding: org/sedml/libsedml/SedReport.class(in = 4133) (out= 1471)(deflated 64%) adding: org/sedml/libsedml/SedSetValue.class(in = 7908) (out= 2374)(deflated 69%) adding: org/sedml/libsedml/SedSimulation.class(in = 4505) (out= 1549)(deflated 65%) adding: org/sedml/libsedml/SedSlice.class(in = 3496) (out= 1310)(deflated 62%) adding: org/sedml/libsedml/SedSteadyState.class(in = 2546) (out= 1037)(deflated 59%) adding: org/sedml/libsedml/SedSubTask.class(in = 3312) (out= 1250)(deflated 62%) adding: org/sedml/libsedml/SedSurface.class(in = 3385) (out= 1269)(deflated 62%) adding: org/sedml/libsedml/SedTask.class(in = 4382) (out= 1521)(deflated 65%) adding: org/sedml/libsedml/SedUniformRange.class(in = 4402) (out= 1490)(deflated 66%) adding: org/sedml/libsedml/SedUniformTimeCourse.class(in = 4738) (out= 1505)(deflated 68%) adding: org/sedml/libsedml/SedVariable.class(in = 4916) (out= 1599)(deflated 67%) adding: org/sedml/libsedml/SedVectorRange.class(in = 3456) (out= 1279)(deflated 62%) adding: org/sedml/libsedml/SedWriter.class(in = 2686) (out= 1052)(deflated 60%) adding: org/sedml/libsedml/Tuple.class(in = 3012) (out= 1199)(deflated 60%) adding: org/sedml/libsedml/TupleDescription.class(in = 3597) (out= 1292)(deflated 64%) adding: org/sedml/libsedml/XMLAttributes.class(in = 6722) (out= 1883)(deflated 71%) adding: org/sedml/libsedml/XMLConstructorException.class(in = 1109) (out= 615)(deflated 44%) adding: org/sedml/libsedml/XMLError.class(in = 4368) (out= 1614)(deflated 63%) adding: org/sedml/libsedml/XMLErrorLog.class(in = 4236) (out= 1500)(deflated 64%) adding: org/sedml/libsedml/XMLInputStream.class(in = 4641) (out= 1513)(deflated 67%) adding: org/sedml/libsedml/XMLNamespaces.class(in = 4087) (out= 1399)(deflated 65%) adding: org/sedml/libsedml/XMLNode.class(in = 8076) (out= 2346)(deflated 70%) adding: org/sedml/libsedml/XMLOutputStream.class(in = 9090) (out= 2467)(deflated 72%) adding: org/sedml/libsedml/XMLOwningOutputFileStream.class(in = 1951) (out= 759)(deflated 61%) adding: org/sedml/libsedml/XMLOwningOutputStringStream.class(in = 1659) (out= 707)(deflated 57%) adding: org/sedml/libsedml/XMLToken.class(in = 12891) (out= 3305)(deflated 74%) adding: org/sedml/libsedml/XMLTriple.class(in = 2398) (out= 1033)(deflated 56%) adding: org/sedml/libsedml/XmlErrorStdVector.class(in = 2335) (out= 949)(deflated 59%) adding: org/sedml/libsedml/libsedml.class(in = 11526) (out= 3901)(deflated 66%) adding: org/sedml/libsedml/libsedmlConstants.class(in = 35707) (out= 11367)(deflated 68%) adding: org/sedml/libsedml/libsedmlJNI.class(in = 164602) (out= 32996)(deflated 79%) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Built target binding_java_jar make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Built target binding_perl_swig make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 75%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. [ 76%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML.cpp [ 77%] Linking CXX shared module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Built target binding_perl_lib make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Swig Ruby source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby -I/usr/include/ -I/usr/include/ -c++ -ruby -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/libsedml.i /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Built target binding_ruby_swig make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 78%] Building CXX object bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__slice(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4795:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__delete_at(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4841:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch (std::out_of_range) ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__at(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4851:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_0(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4873:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_1(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4882:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5270:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__delete_at(std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5316:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch (std::out_of_range) ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__at(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5326:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5348:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5357:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_double_Sg__insert__SWIG_0(std::vector*, std::vector::difference_type, int, VALUE*, ...)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5497:19: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] catch( std::invalid_argument ) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_double_Sg__unshift(std::vector*, int, VALUE*, ...)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5517:16: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] catch( std::invalid_argument ) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5652:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__delete_at(std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5698:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch (std::out_of_range) ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__at(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5708:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5730:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5739:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_XMLError_Sm__Sg__insert__SWIG_0(std::vector*, std::vector::difference_type, int, VALUE*, ...)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5863:19: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] catch( std::invalid_argument ) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_XMLError_Sm__Sg__unshift(std::vector*, int, VALUE*, ...)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5883:16: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] catch( std::invalid_argument ) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5980:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__delete_at(std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6026:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch (std::out_of_range) ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__at(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6036:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6058:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6067:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_SedError_Sg__insert__SWIG_0(std::vector*, std::vector::difference_type, int, VALUE*, ...)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6191:19: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] catch( std::invalid_argument ) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_SedError_Sg__unshift(std::vector*, int, VALUE*, ...)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6211:16: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] catch( std::invalid_argument ) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4793:127: required from here /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5268:100: required from here /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5650:107: required from here /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5978:104: required from here /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'static Type swig::traits_as::as(VALUE, bool) [with Type = SedError; VALUE = long unsigned int]': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3498:68: required from 'Type swig::as(VALUE, bool) [with Type = SedError; VALUE = long unsigned int]' /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6174:156: required from here /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3472:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class SedError' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset(v_def,0,sizeof(Type)); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedErrorLog.h:83, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedBase.h:154, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedVariable.h:51, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedTypes.h:44, from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../swig/libsedml.h:31, from /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2440: /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedError.h:969:23: note: 'class SedError' declared here class LIBSEDML_EXTERN SedError : public XMLError ^~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_matchesSedNamespaces(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:25021:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_matchesRequiredSedNamespacesForAddition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:25134:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesSBMLNamespaces(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:93253:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesRequiredSBMLNamespacesForAddition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:93366:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NUMLErrorLog_add(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:137512:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ASTNode_setType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5461:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:84635:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Iterator___sub__(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3209:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] res = SWIG_AsVal_long (obj, val ? &v : 0); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:8779:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ConstIterator___sub__(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3209:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] res = SWIG_AsVal_long (obj, val ? &v : 0); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:8196:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_TupleDescription_getAtomicDescription(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:135861:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CompositeDescription_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:135326:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Tuple_getAtomicValue(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:134083:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CompositeValue_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:133515:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NUMLList_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:127706:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getNestedCVTerm(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:108269:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getConstraint(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100109:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getDisabledPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:92202:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedErrorLog_getNumFailsWithSeverity(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:29267:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOf_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:32117:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getResourceURI(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:107653:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_DimensionDescription_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:132894:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_DimensionDescription_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:132588:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Dimension_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:132102:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Dimension_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131922:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ResultComponents_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131404:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ResultComponents_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131224:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_OntologyTerms_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:129231:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_OntologyTerms_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:129051:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_appendNotes(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:127202:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:126897:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:126649:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:126530:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNode_getChild(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:118433:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLToken_getNamespacePrefix(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:116205:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLToken_removeNamespace(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:115959:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_getPrefix(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:112793:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:112490:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setBiologicalQualifierType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:107957:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setModelQualifierType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:107869:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeEvent(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:105107:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeReaction(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104987:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104796:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeInitialAssignment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104676:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104556:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104436:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104316:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpeciesType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104196:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartmentType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104076:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeUnitDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:103956:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeFunctionDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:103836:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getEvent(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100773:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getModifierSpeciesReference(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100612:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesReference(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100487:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getReaction(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100302:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRuleByVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100026:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRuleByVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99901:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99776:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99651:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRuleByVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99526:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99341:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignmentBySymbol(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99180:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99034:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98774:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98553:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98332:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98111:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartmentType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:97890:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getUnitDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:97669:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getFunctionDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:97448:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:96243:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:96124:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:92059:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_setSBOTerm(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90976:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_appendNotes(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90745:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90440:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90116:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:89997:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementByMetaId(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:87779:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementBySId(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:87654:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ASTNode_getPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:85951:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeOutput(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:80344:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getOutput(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:80032:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeDataGenerator(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79839:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getDataGenerator(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79579:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeTask(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79394:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getTask(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79104:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeModel(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78911:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getModel(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78651:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeSimulation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78466:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getSimulation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78154:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeDataDescription(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:77961:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getDataDescription(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:77701:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeSubTask(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76907:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getSubTask(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76647:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeTaskChange(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76462:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getTaskChange(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76202:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeRange(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76017:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getRange(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:75705:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTasks_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:74963:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTasks_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:74673:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTaskChanges_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:72552:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTaskChanges_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:72292:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71775:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71515:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_removeVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71330:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_getVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71070:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSubTasks_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:70003:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSubTasks_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:69743:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfFunctionalRanges_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:68722:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfFunctionalRanges_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:68462:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67945:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67685:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_removeVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67500:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_getVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67240:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfRanges_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:65141:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfRanges_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:64829:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataGenerators_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:63902:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataGenerators_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:63642:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:63125:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:62865:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_removeVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:62680:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_getVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:62420:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot3D_removeSurface(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:61508:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot3D_getSurface(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:61248:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot2D_removeCurve(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:60662:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot2D_getCurve(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:60402:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedReport_removeDataSet(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:59608:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedReport_getDataSet(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:59348:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfOutputs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:58829:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfOutputs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:58517:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSurfaces_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:57434:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSurfaces_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:57174:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfCurves_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:56153:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfCurves_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:55893:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSets_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:53887:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSets_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:53627:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSources_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:52377:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSources_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:52117:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataSource_removeSlice(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:51600:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataSource_getSlice(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:51340:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataDescriptions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:50488:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataDescriptions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:50228:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataDescription_removeDataSource(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:49711:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataDescription_getDataSource(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:49451:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSlices_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:48360:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSlices_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:48100:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSimulations_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:46255:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSimulations_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:45943:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfAlgorithmParameters_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:44669:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfAlgorithmParameters_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:44409:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithmParameter_setKisaoID(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:44038:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_removeAlgorithmParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:43104:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_getAlgorithmParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:42844:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_setKisaoID(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:43355:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfModels_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:42214:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfModels_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:41954:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedModel_removeChange(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:41437:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedModel_getChange(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:41077:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:40039:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:39779:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_removeVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:39594:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_getVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:39334:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfChanges_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:36968:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfChanges_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:36608:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfParameters_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:35681:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfParameters_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:35421:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfVariables_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:34289:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfVariables_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:34029:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_appendNotes(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:24251:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:23946:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:23698:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:23579:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLErrorLog_add(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5075:28: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] if (rb_obj_is_kind_of(obj, rb_cArray) == Qtrue) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:28658:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedErrorLog_add(int, VALUE*, VALUE)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:31489:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ [ 79%] Linking CXX shared library libSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_ruby_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libSEDML.so -o libSEDML.so CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lruby /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 79%] Built target binding_ruby_lib make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 80%] Swig R source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r -I/usr/include/ -I/usr/include/ -c++ -r -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a R keyword, renaming to '_next' /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 80%] Built target binding_r_swig make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 81%] Building CXX object bindings/r/CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_r_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../swig -I/usr/include/R -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp: In function 'int _p_f_p_q_const__ASTNode__int(const ASTNode_t*)': /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp:58243:14: warning: unused variable 'arg1' [-Wunused-variable] ASTNode_t *arg1 = (ASTNode_t *) 0 ; ^~~~ /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp:58249:7: warning: unused variable 'ecode' [-Wunused-variable] int ecode = 0; ^~~~~ [ 81%] Linking CXX shared library libSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_r_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libSEDML.so -o libSEDML.so CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o -L/usr/lib/R/lib ../../sedml/libsedml-static.a -lR /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 82%] Built target binding_r_lib make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_package make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 83%] Create R Package (32bit) cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/patch-swig-file.cmake DONE cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.so /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/inst/libs cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/R cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/R CMD INSTALL --build --no-libs --no-test-load --no-clean-on-error --no-multiarch libSEDML -l temp * installing *source* package 'libSEDML' ... ** R ** inst ** byte-compile and prepare package for lazy loading Note: possible error in 'cerr_get(.copy)': unused argument (.copy) Note: possible error in 'clog_get(.copy)': unused argument (.copy) Note: possible error in 'cout_get(.copy)': unused argument (.copy) ** help No man pages found in package 'libSEDML' *** installing help indices ** building package indices * creating tarball packaged installation of 'libSEDML' as 'libSEDML_0.4.3_R_i686-redhat-linux-gnu.tar.gz' * DONE (libSEDML) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 84%] Built target binding_r_package make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 85%] Building C object examples/c/CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/echo_sedml.c [ 85%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 85%] Built target example_c_echo_sedml make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 86%] Building C object examples/c/CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/create_sedml.c [ 87%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 87%] Built target example_c_create_sedml make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 88%] Building C object examples/c/CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/print_sedml.c [ 89%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 89%] Built target example_c_print_sedml make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 90%] Building CXX object examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/echo_sedml.cpp [ 91%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 91%] Built target example_cpp_echo_sedml make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 91%] Building CXX object examples/c++/CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/create_sedml.cpp [ 92%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 92%] Built target example_cpp_create_sedml make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 92%] Building CXX object examples/c++/CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/print_sedml.cpp [ 93%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 93%] Built target example_cpp_print_sedml make -f examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target exmple_cs_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 94%] Build C# example: echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp && /usr/bin/mcs -r:/builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/../../bindings/csharp/libsedmlcsP.dll -target:exe -out:echo_sedml.exe /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp/echo_sedml.cs make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 94%] Built target exmple_cs_echo_sedml make -f examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target exmple_cs_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Build C# example: create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp && /usr/bin/mcs -r:/builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/../../bindings/csharp/libsedmlcsP.dll -target:exe -out:create_sedml.exe /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp/create_sedml.cs make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target exmple_cs_create_sedml make -f examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target exmple_cs_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Build C# example: print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp && /usr/bin/mcs -r:/builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/../../bindings/csharp/libsedmlcsP.dll -target:exe -out:print_sedml.exe /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp/print_sedml.cs make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target exmple_cs_print_sedml make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Build java example echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/examples/java/echo_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java warning: [options] bootstrap class path not set in conjunction with -source 1.5 warning: [options] source value 1.5 is obsolete and will be removed in a future release warning: [options] target value 1.5 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. 4 warnings make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target example_java_echo_sedml make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 96%] Build java example create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/examples/java/create_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java warning: [options] bootstrap class path not set in conjunction with -source 1.5 warning: [options] source value 1.5 is obsolete and will be removed in a future release warning: [options] target value 1.5 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. 4 warnings make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 96%] Built target example_java_create_sedml make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 97%] Build java example print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/examples/java/print_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java warning: [options] bootstrap class path not set in conjunction with -source 1.5 warning: [options] source value 1.5 is obsolete and will be removed in a future release warning: [options] target value 1.5 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. 4 warnings make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 97%] Built target example_java_print_sedml make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/tests /builddir/build/BUILD/libSEDML-0.4.3/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 98%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestIssues.cpp [ 99%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestRunner.cpp [100%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../sedml/libsedml-static.a -lcheck -Wl,-Bstatic -lsbml-static -Wl,-Bdynamic -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles 0 + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.pZ1G9i + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 ++ dirname /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 + cd libSEDML-0.4.3 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 33%] Built target sedml-static /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 67%] Built target sedml /usr/bin/make -f bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 67%] Built target binding_csharp_swig /usr/bin/make -f bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 69%] Built target binding_csharp_native_lib /usr/bin/make -f bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Built target binding_csharp_managed_lib /usr/bin/make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Built target binding_java_swig /usr/bin/make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 72%] Built target binding_java_lib /usr/bin/make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_jar.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Built target binding_java_jar /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Built target binding_perl_swig /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 75%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. [ 76%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML.cpp [ 77%] Linking CXX shared module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib/libsbml-static.a -lbz2 -lz -lxml2 -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Built target binding_perl_lib /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Built target binding_ruby_swig /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 79%] Built target binding_ruby_lib /usr/bin/make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/r/CMakeFiles/binding_r_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 80%] Built target binding_r_swig /usr/bin/make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/r/CMakeFiles/binding_r_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 82%] Built target binding_r_lib /usr/bin/make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 83%] Create R Package (32bit) cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/patch-swig-file.cmake cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.so /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/inst/libs cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/R cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/R CMD INSTALL --build --no-libs --no-test-load --no-clean-on-error --no-multiarch libSEDML -l temp DONE * installing *source* package 'libSEDML' ... ** R ** inst ** byte-compile and prepare package for lazy loading Note: possible error in 'cerr_get(.copy)': unused argument (.copy) Note: possible error in 'clog_get(.copy)': unused argument (.copy) Note: possible error in 'cout_get(.copy)': unused argument (.copy) ** help No man pages found in package 'libSEDML' *** installing help indices ** building package indices * creating tarball packaged installation of 'libSEDML' as 'libSEDML_0.4.3_R_i686-redhat-linux-gnu.tar.gz' * DONE (libSEDML) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 84%] Built target binding_r_package /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 85%] Built target example_c_echo_sedml /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 87%] Built target example_c_create_sedml /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 89%] Built target example_c_print_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 91%] Built target example_cpp_echo_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 92%] Built target example_cpp_create_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 93%] Built target example_cpp_print_sedml /usr/bin/make -f examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/csharp/CMakeFiles/exmple_cs_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 94%] Built target exmple_cs_echo_sedml /usr/bin/make -f examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/csharp/CMakeFiles/exmple_cs_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target exmple_cs_create_sedml /usr/bin/make -f examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp /builddir/build/BUILD/libSEDML-0.4.3/build/examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build.make examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/csharp/CMakeFiles/exmple_cs_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target exmple_cs_print_sedml /usr/bin/make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target example_java_echo_sedml /usr/bin/make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 96%] Built target example_java_create_sedml /usr/bin/make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 97%] Built target example_java_print_sedml /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/tests /builddir/build/BUILD/libSEDML-0.4.3/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/common.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/extern.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/libsedml-config.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/operationReturnValues.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/sedmlfwd.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedAddXML.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedAlgorithm.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedAlgorithmParameter.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedBase.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedChange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedChangeAttribute.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedChangeXML.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedComputeChange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedConstructorException.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedCurve.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataDescription.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataGenerator.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataSet.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataSource.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDocument.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedError.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedErrorLog.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedErrorTable.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedFunctionalRange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedListOf.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedModel.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedNamespaces.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedOneStep.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedOutput.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedParameter.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedPlot2D.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedPlot3D.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedRange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedReader.h -- Installing: 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/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/java/create_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/java/echo_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/java/print_sedml.java make: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 'INSTALL=/usr/bin/install -p' -C build2 make: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build2 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 42%] Built target sedml-static /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 83%] Built target sedml /usr/bin/make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 84%] Built target binding_python_swig /usr/bin/make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 86%] Built target binding_python_lib /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 88%] Built target example_c_echo_sedml /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 90%] Built target example_c_create_sedml /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 91%] Built target example_c_print_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 93%] Built target example_cpp_echo_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 95%] Built target example_cpp_create_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 97%] Built target example_cpp_print_sedml /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/tests /builddir/build/BUILD/libSEDML-0.4.3/build2/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/common.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/extern.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/libsedml-config.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/operationReturnValues.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/sedmlfwd.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedAddXML.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedAlgorithm.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedAlgorithmParameter.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedBase.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedChange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedChangeAttribute.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedChangeXML.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedComputeChange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedConstructorException.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedCurve.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataDescription.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataGenerator.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataSet.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDataSource.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedDocument.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedError.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedErrorLog.h -- Up-to-date: 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/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedSubTask.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedSurface.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedTask.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedTypeCodes.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedTypes.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedUniformRange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedUniformTimeCourse.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedVariable.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedVectorRange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedVisitor.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/SedWriter.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/libsedml-version.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/libsedml-config-common.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/libsedml-namespace.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/include/sedml/common/libsedml-package.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml.so.0.4.3 -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml.so.0 -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/cmake/sedml-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/cmake/sedml-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/cmake/sedml-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml-static.a -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/cmake/sedml-static-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/cmake/sedml-static-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/cmake/sedml-static-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/python3.7/site-packages/libsedml/_libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/python3.7/site-packages/libsedml.pth -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/python3.7/site-packages/libsedml/libsedml.py -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/README.md -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c/README.md -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c/create_sedml.c -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c/echo_sedml.c -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c/print_sedml.c -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c++/README.md -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c++/create_sedml.cpp -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c++/echo_sedml.cpp -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/c++/print_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/python/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/python/create_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/python/create_sedml2.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/python/echo_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml/examples/python/print_sedml.py make: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' + mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/libsedml + mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/R/library build/bindings/r/libSEDML_0.4.3_R_i686-redhat-linux-gnu.tar.gz * installing *binary* package 'libSEDML' ... * DONE (libSEDML) + test -d SEDML/src + rm -rf /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/R/library/SEDML/R.css + ln -sf /usr/lib/libSEDML.so /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/R/library/libSEDML/libs/libSEDML.so + find /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 -name '*.la' -delete + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 0.4.3-19.fc30 --unique-debug-suffix -0.4.3-19.fc30.i386 --unique-debug-src-base libsedml-0.4.3-19.fc30.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libSEDML-0.4.3 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/python3.7/site-packages/libsedml/_libsedml.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml.so.0.4.3 extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/python3.7/site-packages/libsedml/_libsedml.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml.so.0.4.3 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libSEDML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/ruby/vendor_ruby/libSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/ruby/vendor_ruby/libSEDML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/perl5/vendor_perl/auto/libSEDML/LibSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/perl5/vendor_perl/auto/libSEDML/LibSEDML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml/libsedmlj.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/libsedml/libsedmlj.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/mono/libsedmlcsP/libsedmlcs.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/mono/libsedmlcsP/libsedmlcs.so /usr/lib/rpm/sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. 48319 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/debug/usr/lib/python3.7 using /usr/bin/python3.7 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/lib/python3.7 using /usr/bin/python3.7 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.22J7z8 + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + cd build + /usr/bin/ctest -V --force-new-ctest-process --stop-time 2000 UpdateCTestConfiguration from :/builddir/build/BUILD/libSEDML-0.4.3/build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/libSEDML-0.4.3/build/DartConfiguration.tcl Test project /builddir/build/BUILD/libSEDML-0.4.3/build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_sedml_run 1: Test command: /builddir/build/BUILD/libSEDML-0.4.3/build/tests/test_sedml 1: Test timeout computed to be: 10000000 1: Testing issues reported using: 1: libSBML : 5.17.0 (using new ASTnode implementation) 1: libSEDML : 0.4.3 1: 1: Running suite(s): SedMLIssues 1: 100%: Checks: 1, Failures: 0, Errors: 0 1/1 Test #1: test_sedml_run ................... Passed 0.02 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.02 sec + exit 0 Processing files: libsedml-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.urZGaY + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LxCdNN + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: libsedml = 1:0.4.3-19.fc30 libsedml(x86-32) = 1:0.4.3-19.fc30 libsedml.so.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 rtld(GNU_HASH) Processing files: libsedml-devel-0.4.3-19.fc30.i686 Provides: libsedml-devel = 1:0.4.3-19.fc30 libsedml-devel(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsedml.so.0 Processing files: libsedml-static-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.TICG8D + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.IuXYuu + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: libsedml-static = 1:0.4.3-19.fc30 libsedml-static(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-libsedml-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.hXyH0k + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.MJQhxb + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: python3-libsedml = 1:0.4.3-19.fc30 python3-libsedml(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libpython3.7m.so.1.0 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 python(abi) = 3.7 rtld(GNU_HASH) Processing files: java-SEDML-0.4.3-19.fc30.i686 Provides: java-SEDML = 1:0.4.3-19.fc30 java-SEDML(x86-32) = 1:0.4.3-19.fc30 libsedmlj.so Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 rtld(GNU_HASH) Processing files: perl-SEDML-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.qNfZF2 + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.sapKPT + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: perl(LibSEDML) perl(LibSEDML::ASTNode) perl(LibSEDML::ASTNodeList) perl(LibSEDML::AtomicDescription) perl(LibSEDML::AtomicValue) perl(LibSEDML::CVTerm) perl(LibSEDML::CVTermList) perl(LibSEDML::CompositeDescription) perl(LibSEDML::CompositeValue) perl(LibSEDML::Date) perl(LibSEDML::DateList) perl(LibSEDML::Dimension) perl(LibSEDML::DimensionDescription) perl(LibSEDML::DoubleStdVector) perl(LibSEDML::L3ParserSettings) perl(LibSEDML::MathML) perl(LibSEDML::Model) perl(LibSEDML::ModelCreatorList) perl(LibSEDML::NMBase) perl(LibSEDML::NUMLConstructorException) perl(LibSEDML::NUMLDocument) perl(LibSEDML::NUMLError) perl(LibSEDML::NUMLErrorLog) perl(LibSEDML::NUMLList) perl(LibSEDML::NUMLNamespaces) perl(LibSEDML::NUMLReader) perl(LibSEDML::NUMLWriter) perl(LibSEDML::OFStream) perl(LibSEDML::ONTOLOGY) perl(LibSEDML::OStream) perl(LibSEDML::OStringStream) perl(LibSEDML::OntologyTerm) perl(LibSEDML::OntologyTerms) perl(LibSEDML::ResultComponent) perl(LibSEDML::ResultComponents) perl(LibSEDML::SBMLNamespaces) perl(LibSEDML::SBase) perl(LibSEDML::SBaseList) perl(LibSEDML::SedAddXML) perl(LibSEDML::SedAlgorithm) perl(LibSEDML::SedAlgorithmParameter) perl(LibSEDML::SedBase) perl(LibSEDML::SedBaseList) perl(LibSEDML::SedChange) perl(LibSEDML::SedChangeAttribute) perl(LibSEDML::SedChangeXML) perl(LibSEDML::SedComputeChange) perl(LibSEDML::SedConstructorException) perl(LibSEDML::SedCurve) perl(LibSEDML::SedDataDescription) perl(LibSEDML::SedDataGenerator) perl(LibSEDML::SedDataSet) perl(LibSEDML::SedDataSource) perl(LibSEDML::SedDocument) perl(LibSEDML::SedError) perl(LibSEDML::SedErrorLog) perl(LibSEDML::SedErrorStdVector) perl(LibSEDML::SedFunctionalRange) perl(LibSEDML::SedListOf) perl(LibSEDML::SedListOfAlgorithmParameters) perl(LibSEDML::SedListOfChanges) perl(LibSEDML::SedListOfCurves) perl(LibSEDML::SedListOfDataDescriptions) perl(LibSEDML::SedListOfDataGenerators) perl(LibSEDML::SedListOfDataSets) perl(LibSEDML::SedListOfDataSources) perl(LibSEDML::SedListOfFunctionalRanges) perl(LibSEDML::SedListOfModels) perl(LibSEDML::SedListOfOutputs) perl(LibSEDML::SedListOfParameters) perl(LibSEDML::SedListOfRanges) perl(LibSEDML::SedListOfSimulations) perl(LibSEDML::SedListOfSlices) perl(LibSEDML::SedListOfSubTasks) perl(LibSEDML::SedListOfSurfaces) perl(LibSEDML::SedListOfTaskChanges) perl(LibSEDML::SedListOfTasks) perl(LibSEDML::SedListOfVariables) perl(LibSEDML::SedModel) perl(LibSEDML::SedNamespaces) perl(LibSEDML::SedNamespacesList) perl(LibSEDML::SedOneStep) perl(LibSEDML::SedOutput) perl(LibSEDML::SedParameter) perl(LibSEDML::SedPlot2D) perl(LibSEDML::SedPlot3D) perl(LibSEDML::SedRange) perl(LibSEDML::SedReader) perl(LibSEDML::SedRemoveXML) perl(LibSEDML::SedRepeatedTask) perl(LibSEDML::SedReport) perl(LibSEDML::SedSetValue) perl(LibSEDML::SedSimulation) perl(LibSEDML::SedSlice) perl(LibSEDML::SedSteadyState) perl(LibSEDML::SedSubTask) perl(LibSEDML::SedSurface) perl(LibSEDML::SedTask) perl(LibSEDML::SedUniformRange) perl(LibSEDML::SedUniformTimeCourse) perl(LibSEDML::SedVariable) perl(LibSEDML::SedVectorRange) perl(LibSEDML::SedWriter) perl(LibSEDML::Tuple) perl(LibSEDML::TupleDescription) perl(LibSEDML::XMLAttributes) perl(LibSEDML::XMLConstructorException) perl(LibSEDML::XMLError) perl(LibSEDML::XMLErrorLog) perl(LibSEDML::XMLInputStream) perl(LibSEDML::XMLNamespaces) perl(LibSEDML::XMLNode) perl(LibSEDML::XMLOutputStream) perl(LibSEDML::XMLOwningOutputFileStream) perl(LibSEDML::XMLOwningOutputStringStream) perl(LibSEDML::XMLToken) perl(LibSEDML::XMLTriple) perl(LibSEDML::XmlErrorStdVector) perl(LibSEDMLc) perl-SEDML = 1:0.4.3-19.fc30 perl-SEDML(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libperl.so.5.28 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 perl(DynaLoader) perl(Exporter) perl(base) perl(vars) rtld(GNU_HASH) Processing files: ruby-SEDML-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.5ibruL + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.I59haD + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: libSEDML.so ruby(SBML) = 0.4.3 ruby-SEDML = 1:0.4.3-19.fc30 ruby-SEDML(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libruby.so.2.5 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 rtld(GNU_HASH) Processing files: R-SEDML-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Znzt6u + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.DiqV3m + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: R-SEDML = 1:0.4.3-19.fc30 R-SEDML(x86-32) = 1:0.4.3-19.fc30 libSEDML.so Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 rtld(GNU_HASH) Processing files: libsedml-sharp-0.4.3-19.fc30.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.p8yFpf + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.u2qTM7 + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386/usr/share/licenses/libsedml + exit 0 Provides: libsedml-sharp = 1:0.4.3-19.fc30 libsedml-sharp(x86-32) = 1:0.4.3-19.fc30 libsedmlcs.so Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbz2.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libnuml.so.1 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libxml2.so.2 libxml2.so.2(LIBXML2_2.4.30) libxml2.so.2(LIBXML2_2.6.0) libxml2.so.2(LIBXML2_2.6.1) libz.so.1 rtld(GNU_HASH) Processing files: libsedml-debugsource-0.4.3-19.fc30.i686 Provides: libsedml-debugsource = 1:0.4.3-19.fc30 libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsedml-debuginfo-0.4.3-19.fc30.i686 Provides: debuginfo(build-id) = 49b339cfcfe40635f83b2f6273a0553499ab6067 libsedml-debuginfo = 1:0.4.3-19.fc30 libsedml-debuginfo(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Processing files: python3-libsedml-debuginfo-0.4.3-19.fc30.i686 Provides: debuginfo(build-id) = 42343e96ab5b0d90259e8274a312d37d963f536d python3-libsedml-debuginfo = 1:0.4.3-19.fc30 python3-libsedml-debuginfo(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Processing files: java-SEDML-debuginfo-0.4.3-19.fc30.i686 Provides: debuginfo(build-id) = c5c9f55988201b99ace6396afdb2f249f48782ed java-SEDML-debuginfo = 1:0.4.3-19.fc30 java-SEDML-debuginfo(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Processing files: perl-SEDML-debuginfo-0.4.3-19.fc30.i686 Provides: debuginfo(build-id) = fc67f80b54f8020f811ad7ec97bfac994469f3bf perl-SEDML-debuginfo = 1:0.4.3-19.fc30 perl-SEDML-debuginfo(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Processing files: ruby-SEDML-debuginfo-0.4.3-19.fc30.i686 Provides: debuginfo(build-id) = d9104e3099419caa47d443213a052f5fc07319c2 ruby-SEDML-debuginfo = 1:0.4.3-19.fc30 ruby-SEDML-debuginfo(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Processing files: R-SEDML-debuginfo-0.4.3-19.fc30.i686 Provides: R-SEDML-debuginfo = 1:0.4.3-19.fc30 R-SEDML-debuginfo(x86-32) = 1:0.4.3-19.fc30 debuginfo(build-id) = c3b78c79c75b5fcf7b5d9fba5f0ba0ba95a43690 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Processing files: libsedml-sharp-debuginfo-0.4.3-19.fc30.i686 Provides: debuginfo(build-id) = 41948cfd72df051da175564b67445a448a9f622e libsedml-sharp-debuginfo = 1:0.4.3-19.fc30 libsedml-sharp-debuginfo(x86-32) = 1:0.4.3-19.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-32) = 1:0.4.3-19.fc30 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 Wrote: /builddir/build/RPMS/libsedml-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/libsedml-devel-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/libsedml-static-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/python3-libsedml-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/java-SEDML-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/perl-SEDML-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/ruby-SEDML-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/R-SEDML-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/libsedml-sharp-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/libsedml-debugsource-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/libsedml-debuginfo-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/python3-libsedml-debuginfo-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/java-SEDML-debuginfo-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/perl-SEDML-debuginfo-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/ruby-SEDML-debuginfo-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/R-SEDML-debuginfo-0.4.3-19.fc30.i686.rpm Wrote: /builddir/build/RPMS/libsedml-sharp-debuginfo-0.4.3-19.fc30.i686.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.LdPGIm + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/libsedml-0.4.3-19.fc30.i386 + exit 0 Finish: rpmbuild libsedml-0.4.3-19.fc30.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/820846-fedora-rawhide-i386-1541648215.661962/root/var/log/dnf.log /var/lib/mock/820846-fedora-rawhide-i386-1541648215.661962/root/var/log/dnf.librepo.log /var/lib/mock/820846-fedora-rawhide-i386-1541648215.661962/root/var/log/dnf.rpm.log Finish: build phase for libsedml-0.4.3-19.fc30.src.rpm INFO: Done(/var/lib/copr-rpmbuild/results/libsedml-0.4.3-19.fc30.src.rpm) Config(child) 18 minutes 32 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run