Warning: Permanently added '172.25.81.26' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 820896 --chroot fedora-rawhide-ppc64le --detached default Version: 0.22 Task: {'build_id': 820896, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-ppc64le', 'enable_net': False, 'fetch_sources_only': True, 'git_hash': 'f15e8291496b559065a2965d1cb9269092850820', 'git_repo': '@scitech/octave4.4/libsbml', 'memory_reqs': 2048, 'package_name': 'libsbml', 'package_version': '5.17.0-11.fc30', 'project_dirname': 'octave4.4', 'project_name': 'octave4.4', 'project_owner': '@scitech', 'repos': [{'id': 'copr_base', 'name': 'Copr repository', 'url': 'https://copr-be.cloud.fedoraproject.org/results/@scitech/octave4.4/fedora-rawhide-ppc64le/'}], 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/@scitech/octave4.4/libsbml.git', 'committish': 'f15e8291496b559065a2965d1cb9269092850820'}, 'source_type': 8, 'submitter': 'orion', 'task_id': '820896-fedora-rawhide-ppc64le', 'timeout': 64800, 'use_bootstrap_container': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/@scitech/octave4.4/libsbml.git /tmp/tmp05vban2b/libsbml --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/@scitech/octave4.4/libsbml.git', '/tmp/tmp05vban2b/libsbml', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/tmp05vban2b/libsbml'... Running: git checkout f15e8291496b559065a2965d1cb9269092850820 cmd: ['git', 'checkout', 'f15e8291496b559065a2965d1cb9269092850820'] cwd: /tmp/tmp05vban2b/libsbml rc: 0 stdout: stderr: Note: checking out 'f15e8291496b559065a2965d1cb9269092850820'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at f15e829 automatic import of libsbml 5.17.0-11.fc30 Running: cp -r . /tmp/tmpailth1hj cmd: ['cp', '-r', '.', '/tmp/tmpailth1hj'] cwd: /tmp/tmp05vban2b/libsbml rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/tmp05vban2b/.config/rpkg.conf Running: rpkg -C /tmp/tmp05vban2b/.config/rpkg.conf sources --outdir /tmp/tmpailth1hj cmd: ['rpkg', '-C', '/tmp/tmp05vban2b/.config/rpkg.conf', 'sources', '--outdir', '/tmp/tmpailth1hj'] cwd: /tmp/tmp05vban2b/libsbml rc: 0 stdout: Downloading libSBML-5.17.0-core-plus-packages-src.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org Downloading libSBML-5.17.0-render-src.zip from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running: unbuffer /usr/bin/mock --buildsrpm --spec /tmp/tmpailth1hj/libsbml.spec --sources /tmp/tmpailth1hj --configdir /var/lib/copr-rpmbuild/results/configs --resultdir /var/lib/copr-rpmbuild/results --define %_disable_source_fetch 0 --uniqueext 1541659906.234154 -r child WARNING: Could not find required logging config file: /var/lib/copr-rpmbuild/results/configs/logging.ini. Using default... INFO: mock.py version 1.4.13 starting (python version = 3.6.5)... Start: init plugins INFO: tmpfs initialized INFO: selinux disabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins Start: run INFO: Start(/tmp/tmpailth1hj/libsbml.spec) Config(820896-fedora-rawhide-ppc64le) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659906.234154/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled HW Info plugin Mock Version: 1.4.13 INFO: Mock Version: 1.4.13 Start: dnf install Last metadata expiration check: 0:00:00 ago on Thu 08 Nov 2018 06:51:48 AM UTC. Dependencies resolved. ================================================================================ Group Packages ================================================================================ Marking packages as installed by the group: @Buildsystem building group make rpm-build grep patch bash gawk redhat-rpm-config sed tar bzip2 unzip diffutils gzip shadow-utils findutils coreutils xz util-linux info fedora-release cpio which ================================================================================ Package Arch Version Repository Size ================================================================================ Installing group packages: bash ppc64le 4.4.23-5.fc30 fedora 1.5 M bzip2 ppc64le 1.0.6-28.fc29 fedora 52 k coreutils ppc64le 8.30-7.fc30 fedora 1.1 M cpio ppc64le 2.12-9.fc29 fedora 255 k diffutils ppc64le 3.6-5.fc29 fedora 358 k fedora-release noarch 30-0.12 fedora 8.6 k findutils ppc64le 1:4.6.0-21.fc30 fedora 519 k gawk ppc64le 4.2.1-3.fc29 fedora 1.1 M grep ppc64le 3.1-8.fc29 fedora 258 k gzip ppc64le 1.9-7.fc29 fedora 156 k info ppc64le 6.5-11.fc30 fedora 194 k make ppc64le 1:4.2.1-10.fc29 fedora 494 k patch ppc64le 2.7.6-7.fc30 fedora 132 k redhat-rpm-config noarch 123-1.fc30 fedora 60 k rpm-build ppc64le 4.14.2.1-2.fc30 fedora 116 k sed ppc64le 4.5-2.fc29 fedora 293 k shadow-utils ppc64le 2:4.6-3.fc30 fedora 1.2 M tar ppc64le 2:1.30-6.fc29 fedora 825 k unzip ppc64le 6.0-40.fc29 fedora 181 k util-linux ppc64le 2.33-0.1.fc30 fedora 2.4 M which ppc64le 2.21-11.fc29 fedora 43 k xz ppc64le 5.2.4-3.fc29 fedora 152 k Installing dependencies: audit-libs ppc64le 3.0-0.4.20180831git0047a6c.fc30 fedora 120 k basesystem noarch 11-6.fc29 fedora 6.9 k binutils ppc64le 2.31.1-15.fc30 fedora 5.9 M brotli ppc64le 1.0.5-1.fc29 fedora 327 k bzip2-libs ppc64le 1.0.6-28.fc29 fedora 44 k ca-certificates noarch 2018.2.26-2.fc30 fedora 385 k chkconfig ppc64le 1.11-2.fc30 fedora 175 k coreutils-common ppc64le 8.30-7.fc30 fedora 1.9 M cracklib ppc64le 2.9.6-17.fc30 fedora 78 k crypto-policies noarch 20181026-1.gitd42aaa6.fc30 fedora 46 k curl ppc64le 7.62.0-1.fc30 fedora 317 k cyrus-sasl-lib ppc64le 2.1.27-0.4rc7.fc30 fedora 104 k dwz ppc64le 0.12-9.fc29 fedora 111 k efi-srpm-macros noarch 4-1.fc30 fedora 22 k elfutils ppc64le 0.174-3.fc30 fedora 300 k elfutils-default-yama-scope noarch 0.174-3.fc30 fedora 15 k elfutils-libelf ppc64le 0.174-3.fc30 fedora 183 k elfutils-libs ppc64le 0.174-3.fc30 fedora 289 k expat ppc64le 2.2.6-1.fc30 fedora 102 k fedora-gpg-keys noarch 30-0.1 fedora 97 k fedora-release-common noarch 30-0.12 fedora 16 k fedora-repos noarch 30-0.1 fedora 8.7 k fedora-repos-rawhide noarch 30-0.1 fedora 7.9 k file ppc64le 5.34-3.fc29 fedora 50 k file-libs ppc64le 5.34-3.fc29 fedora 533 k filesystem ppc64le 3.9-2.fc29 fedora 1.1 M fpc-srpm-macros noarch 1.1-5.fc29 fedora 7.5 k gc ppc64le 7.6.4-4.fc29 fedora 107 k gdb-headless ppc64le 8.2.50.20181016-7.fc30 fedora 3.3 M gdbm-libs ppc64le 1:1.18-1.fc30 fedora 53 k ghc-srpm-macros noarch 1.4.2-8.fc29 fedora 7.4 k glib2 ppc64le 2.58.1-2.fc30 fedora 2.6 M glibc ppc64le 2.28.9000-13.fc30 fedora 3.9 M glibc-all-langpacks ppc64le 2.28.9000-13.fc30 fedora 25 M glibc-common ppc64le 2.28.9000-13.fc30 fedora 823 k gmp ppc64le 1:6.1.2-8.fc29 fedora 276 k gnat-srpm-macros noarch 4-4.fc30 fedora 7.9 k go-srpm-macros noarch 2-18.fc29 fedora 11 k guile ppc64le 5:2.0.14-12.fc29 fedora 3.5 M keyutils-libs ppc64le 1.5.11-1.fc30 fedora 26 k krb5-libs ppc64le 1.16.1-25.fc30 fedora 775 k libacl ppc64le 2.2.53-2.fc29 fedora 27 k libarchive ppc64le 3.3.3-1.fc30 fedora 397 k libatomic_ops ppc64le 7.6.6-1.fc29 fedora 34 k libattr ppc64le 2.4.48-4.fc30 fedora 17 k libbabeltrace ppc64le 1.5.6-1.fc29 fedora 217 k libblkid ppc64le 2.33-0.1.fc30 fedora 168 k libcap ppc64le 2.25-12.fc29 fedora 52 k libcap-ng ppc64le 0.7.9-5.fc30 fedora 28 k libcom_err ppc64le 1.44.4-1.fc30 fedora 27 k libcurl ppc64le 7.62.0-1.fc30 fedora 269 k libdb ppc64le 5.3.28-34.fc30 fedora 771 k libdb-utils ppc64le 5.3.28-34.fc30 fedora 138 k libfdisk ppc64le 2.33-0.1.fc30 fedora 214 k libffi ppc64le 3.1-18.fc29 fedora 33 k libgcc ppc64le 8.2.1-4.fc30 fedora 84 k libgcrypt ppc64le 1.8.3-3.fc29 fedora 422 k libgpg-error ppc64le 1.31-2.fc29 fedora 243 k libidn2 ppc64le 2.0.5-2.fc29 fedora 89 k libmetalink ppc64le 0.1.3-7.fc29 fedora 33 k libmount ppc64le 2.33-0.1.fc30 fedora 193 k libnghttp2 ppc64le 1.34.0-1.fc30 fedora 77 k libnsl2 ppc64le 1.2.0-3.20180605git4a062cf.fc30 fedora 59 k libpkgconf ppc64le 1.5.3-2.fc29 fedora 39 k libpsl ppc64le 0.20.2-5.fc29 fedora 60 k libpwquality ppc64le 1.4.0-11.fc30 fedora 98 k libselinux ppc64le 2.8-4.fc30 fedora 92 k libsemanage ppc64le 2.8-5.fc30 fedora 119 k libsepol ppc64le 2.8-2.fc29 fedora 328 k libsigsegv ppc64le 2.11-6.fc29 fedora 26 k libsmartcols ppc64le 2.33-0.1.fc30 fedora 121 k libssh ppc64le 0.8.5-1.fc30 fedora 231 k libstdc++ ppc64le 8.2.1-4.fc30 fedora 499 k libtasn1 ppc64le 4.13-6.fc30 fedora 74 k libtirpc ppc64le 1.1.4-1.rc1.fc30 fedora 111 k libtool-ltdl ppc64le 2.4.6-27.fc30 fedora 38 k libunistring ppc64le 0.9.10-4.fc29 fedora 417 k libutempter ppc64le 1.1.6-15.fc29 fedora 26 k libuuid ppc64le 2.33-0.1.fc30 fedora 28 k libverto ppc64le 0.3.0-6.fc29 fedora 23 k libxcrypt ppc64le 4.2.3-1.fc30 fedora 78 k libxcrypt-common noarch 4.2.3-1.fc30 fedora 33 k libxml2 ppc64le 2.9.8-4.fc29 fedora 707 k libzstd ppc64le 1.3.6-1.fc30 fedora 251 k lua-libs ppc64le 5.3.5-2.fc29 fedora 122 k lz4-libs ppc64le 1.8.2-2.fc29 fedora 68 k mpfr ppc64le 3.1.6-3.fc30 fedora 224 k ncurses ppc64le 6.1-8.20180923.fc30 fedora 366 k ncurses-base noarch 6.1-8.20180923.fc30 fedora 58 k ncurses-libs ppc64le 6.1-8.20180923.fc30 fedora 316 k nim-srpm-macros noarch 1-3.fc29 fedora 8.0 k ocaml-srpm-macros noarch 5-4.fc29 fedora 7.8 k openblas-srpm-macros noarch 2-4.fc29 fedora 7.2 k openldap ppc64le 2.4.46-10.fc30 fedora 307 k openssl-libs ppc64le 1:1.1.1-6.fc30 fedora 1.4 M p11-kit ppc64le 0.23.14-1.fc30 fedora 238 k p11-kit-trust ppc64le 0.23.14-1.fc30 fedora 135 k pam ppc64le 1.3.1-4.fc30 fedora 679 k pcre ppc64le 8.42-5.fc30 fedora 183 k pcre2 ppc64le 10.32-4.fc30 fedora 226 k perl-srpm-macros noarch 1-28.fc29 fedora 8.1 k pkgconf ppc64le 1.5.3-2.fc29 fedora 39 k pkgconf-m4 noarch 1.5.3-2.fc29 fedora 17 k pkgconf-pkg-config ppc64le 1.5.3-2.fc29 fedora 15 k popt ppc64le 1.16-16.fc30 fedora 59 k publicsuffix-list-dafsa noarch 20180723-1.fc29 fedora 54 k python-pip-wheel noarch 18.0-4.fc30 fedora 1.2 M python-setuptools-wheel noarch 40.4.3-1.fc30 fedora 274 k python-srpm-macros noarch 3-39.fc30 fedora 12 k python3-libs ppc64le 3.7.1-2.fc30 fedora 7.4 M qt5-srpm-macros noarch 5.11.2-1.fc30 fedora 9.2 k readline ppc64le 7.0-12.fc29 fedora 200 k rpm ppc64le 4.14.2.1-2.fc30 fedora 487 k rpm-build-libs ppc64le 4.14.2.1-2.fc30 fedora 102 k rpm-libs ppc64le 4.14.2.1-2.fc30 fedora 306 k rust-srpm-macros noarch 6-1.fc30 fedora 8.4 k setup noarch 2.12.3-1.fc30 fedora 148 k sqlite-libs ppc64le 3.25.2-1.fc30 fedora 581 k systemd-libs ppc64le 239-8.git9f3aed1.fc30 fedora 481 k tzdata noarch 2018e-2.fc29 fedora 423 k xz-libs ppc64le 5.2.4-3.fc29 fedora 105 k zip ppc64le 3.0-23.fc29 fedora 265 k zlib ppc64le 1.2.11-14.fc30 fedora 94 k zstd ppc64le 1.3.6-1.fc30 fedora 306 k Transaction Summary ================================================================================ Install 146 Packages Total download size: 88 M Installed size: 492 M Downloading Packages: -------------------------------------------------------------------------------- Total 71 MB/s | 88 MB 00:01 warning: /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659906.234154/root/var/cache/dnf/fedora-1c578a7639193129/packages/gawk-4.2.1-3.fc29.ppc64le.rpm: Header V3 RSA/SHA256 Signature, key ID cfc659b9: NOKEY Importing GPG key 0xCFC659B9: Userid : "Fedora (30) " Fingerprint: F1D8 EC98 F241 AAF2 0DF6 9420 EF3C 111F CFC6 59B9 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-30-primary Key imported successfully Importing GPG key 0x429476B4: Userid : "Fedora 29 (29) " Fingerprint: 5A03 B4DD 8254 ECA0 2FDA 1637 A20A A56B 4294 76B4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-29-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction warning: /etc/hosts created as /etc/hosts.rpmnew Installed: bash.ppc64le 4.4.23-5.fc30 bzip2.ppc64le 1.0.6-28.fc29 coreutils.ppc64le 8.30-7.fc30 cpio.ppc64le 2.12-9.fc29 diffutils.ppc64le 3.6-5.fc29 fedora-release.noarch 30-0.12 findutils.ppc64le 1:4.6.0-21.fc30 gawk.ppc64le 4.2.1-3.fc29 grep.ppc64le 3.1-8.fc29 gzip.ppc64le 1.9-7.fc29 info.ppc64le 6.5-11.fc30 make.ppc64le 1:4.2.1-10.fc29 patch.ppc64le 2.7.6-7.fc30 redhat-rpm-config.noarch 123-1.fc30 rpm-build.ppc64le 4.14.2.1-2.fc30 sed.ppc64le 4.5-2.fc29 shadow-utils.ppc64le 2:4.6-3.fc30 tar.ppc64le 2:1.30-6.fc29 unzip.ppc64le 6.0-40.fc29 util-linux.ppc64le 2.33-0.1.fc30 which.ppc64le 2.21-11.fc29 xz.ppc64le 5.2.4-3.fc29 audit-libs.ppc64le 3.0-0.4.20180831git0047a6c.fc30 basesystem.noarch 11-6.fc29 binutils.ppc64le 2.31.1-15.fc30 brotli.ppc64le 1.0.5-1.fc29 bzip2-libs.ppc64le 1.0.6-28.fc29 ca-certificates.noarch 2018.2.26-2.fc30 chkconfig.ppc64le 1.11-2.fc30 coreutils-common.ppc64le 8.30-7.fc30 cracklib.ppc64le 2.9.6-17.fc30 crypto-policies.noarch 20181026-1.gitd42aaa6.fc30 curl.ppc64le 7.62.0-1.fc30 cyrus-sasl-lib.ppc64le 2.1.27-0.4rc7.fc30 dwz.ppc64le 0.12-9.fc29 efi-srpm-macros.noarch 4-1.fc30 elfutils.ppc64le 0.174-3.fc30 elfutils-default-yama-scope.noarch 0.174-3.fc30 elfutils-libelf.ppc64le 0.174-3.fc30 elfutils-libs.ppc64le 0.174-3.fc30 expat.ppc64le 2.2.6-1.fc30 fedora-gpg-keys.noarch 30-0.1 fedora-release-common.noarch 30-0.12 fedora-repos.noarch 30-0.1 fedora-repos-rawhide.noarch 30-0.1 file.ppc64le 5.34-3.fc29 file-libs.ppc64le 5.34-3.fc29 filesystem.ppc64le 3.9-2.fc29 fpc-srpm-macros.noarch 1.1-5.fc29 gc.ppc64le 7.6.4-4.fc29 gdb-headless.ppc64le 8.2.50.20181016-7.fc30 gdbm-libs.ppc64le 1:1.18-1.fc30 ghc-srpm-macros.noarch 1.4.2-8.fc29 glib2.ppc64le 2.58.1-2.fc30 glibc.ppc64le 2.28.9000-13.fc30 glibc-all-langpacks.ppc64le 2.28.9000-13.fc30 glibc-common.ppc64le 2.28.9000-13.fc30 gmp.ppc64le 1:6.1.2-8.fc29 gnat-srpm-macros.noarch 4-4.fc30 go-srpm-macros.noarch 2-18.fc29 guile.ppc64le 5:2.0.14-12.fc29 keyutils-libs.ppc64le 1.5.11-1.fc30 krb5-libs.ppc64le 1.16.1-25.fc30 libacl.ppc64le 2.2.53-2.fc29 libarchive.ppc64le 3.3.3-1.fc30 libatomic_ops.ppc64le 7.6.6-1.fc29 libattr.ppc64le 2.4.48-4.fc30 libbabeltrace.ppc64le 1.5.6-1.fc29 libblkid.ppc64le 2.33-0.1.fc30 libcap.ppc64le 2.25-12.fc29 libcap-ng.ppc64le 0.7.9-5.fc30 libcom_err.ppc64le 1.44.4-1.fc30 libcurl.ppc64le 7.62.0-1.fc30 libdb.ppc64le 5.3.28-34.fc30 libdb-utils.ppc64le 5.3.28-34.fc30 libfdisk.ppc64le 2.33-0.1.fc30 libffi.ppc64le 3.1-18.fc29 libgcc.ppc64le 8.2.1-4.fc30 libgcrypt.ppc64le 1.8.3-3.fc29 libgpg-error.ppc64le 1.31-2.fc29 libidn2.ppc64le 2.0.5-2.fc29 libmetalink.ppc64le 0.1.3-7.fc29 libmount.ppc64le 2.33-0.1.fc30 libnghttp2.ppc64le 1.34.0-1.fc30 libnsl2.ppc64le 1.2.0-3.20180605git4a062cf.fc30 libpkgconf.ppc64le 1.5.3-2.fc29 libpsl.ppc64le 0.20.2-5.fc29 libpwquality.ppc64le 1.4.0-11.fc30 libselinux.ppc64le 2.8-4.fc30 libsemanage.ppc64le 2.8-5.fc30 libsepol.ppc64le 2.8-2.fc29 libsigsegv.ppc64le 2.11-6.fc29 libsmartcols.ppc64le 2.33-0.1.fc30 libssh.ppc64le 0.8.5-1.fc30 libstdc++.ppc64le 8.2.1-4.fc30 libtasn1.ppc64le 4.13-6.fc30 libtirpc.ppc64le 1.1.4-1.rc1.fc30 libtool-ltdl.ppc64le 2.4.6-27.fc30 libunistring.ppc64le 0.9.10-4.fc29 libutempter.ppc64le 1.1.6-15.fc29 libuuid.ppc64le 2.33-0.1.fc30 libverto.ppc64le 0.3.0-6.fc29 libxcrypt.ppc64le 4.2.3-1.fc30 libxcrypt-common.noarch 4.2.3-1.fc30 libxml2.ppc64le 2.9.8-4.fc29 libzstd.ppc64le 1.3.6-1.fc30 lua-libs.ppc64le 5.3.5-2.fc29 lz4-libs.ppc64le 1.8.2-2.fc29 mpfr.ppc64le 3.1.6-3.fc30 ncurses.ppc64le 6.1-8.20180923.fc30 ncurses-base.noarch 6.1-8.20180923.fc30 ncurses-libs.ppc64le 6.1-8.20180923.fc30 nim-srpm-macros.noarch 1-3.fc29 ocaml-srpm-macros.noarch 5-4.fc29 openblas-srpm-macros.noarch 2-4.fc29 openldap.ppc64le 2.4.46-10.fc30 openssl-libs.ppc64le 1:1.1.1-6.fc30 p11-kit.ppc64le 0.23.14-1.fc30 p11-kit-trust.ppc64le 0.23.14-1.fc30 pam.ppc64le 1.3.1-4.fc30 pcre.ppc64le 8.42-5.fc30 pcre2.ppc64le 10.32-4.fc30 perl-srpm-macros.noarch 1-28.fc29 pkgconf.ppc64le 1.5.3-2.fc29 pkgconf-m4.noarch 1.5.3-2.fc29 pkgconf-pkg-config.ppc64le 1.5.3-2.fc29 popt.ppc64le 1.16-16.fc30 publicsuffix-list-dafsa.noarch 20180723-1.fc29 python-pip-wheel.noarch 18.0-4.fc30 python-setuptools-wheel.noarch 40.4.3-1.fc30 python-srpm-macros.noarch 3-39.fc30 python3-libs.ppc64le 3.7.1-2.fc30 qt5-srpm-macros.noarch 5.11.2-1.fc30 readline.ppc64le 7.0-12.fc29 rpm.ppc64le 4.14.2.1-2.fc30 rpm-build-libs.ppc64le 4.14.2.1-2.fc30 rpm-libs.ppc64le 4.14.2.1-2.fc30 rust-srpm-macros.noarch 6-1.fc30 setup.noarch 2.12.3-1.fc30 sqlite-libs.ppc64le 3.25.2-1.fc30 systemd-libs.ppc64le 239-8.git9f3aed1.fc30 tzdata.noarch 2018e-2.fc29 xz-libs.ppc64le 5.2.4-3.fc29 zip.ppc64le 3.0-23.fc29 zlib.ppc64le 1.2.11-14.fc30 zstd.ppc64le 1.3.6-1.fc30 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: Start: buildsrpm Start: rpmbuild -bs sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory Building target platforms: ppc64le Building for target ppc64le Wrote: /builddir/build/SRPMS/libsbml-5.17.0-11.fc30.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659906.234154/root/var/log/dnf.rpm.log /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659906.234154/root/var/log/dnf.librepo.log /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659906.234154/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/tmpailth1hj/libsbml.spec) Config(child) 1 minutes 12 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running: unbuffer /usr/bin/mock --rebuild /var/lib/copr-rpmbuild/results/libsbml-5.17.0-11.fc30.src.rpm --configdir /var/lib/copr-rpmbuild/results/configs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1541659979.844061 -r child WARNING: Could not find required logging config file: /var/lib/copr-rpmbuild/results/configs/logging.ini. Using default... INFO: mock.py version 1.4.13 starting (python version = 3.6.5)... Start: init plugins INFO: tmpfs initialized INFO: selinux disabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins Start: run INFO: Start(/var/lib/copr-rpmbuild/results/libsbml-5.17.0-11.fc30.src.rpm) Config(820896-fedora-rawhide-ppc64le) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659979.844061/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled HW Info plugin Mock Version: 1.4.13 INFO: Mock Version: 1.4.13 Start: dnf update Last metadata expiration check: 0:00:00 ago on Thu 08 Nov 2018 06:53:05 AM UTC. Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for libsbml-5.17.0-11.fc30.src.rpm Start: build setup for libsbml-5.17.0-11.fc30.src.rpm sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory sh: /usr/bin/perl: No such file or directory Building target platforms: ppc64le Building for target ppc64le Wrote: /builddir/build/SRPMS/libsbml-5.17.0-11.fc30.src.rpm Last metadata expiration check: 0:00:00 ago on Thu 08 Nov 2018 06:53:33 AM UTC. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: R-core-devel ppc64le 3.5.1-1.fc30 fedora 89 k R-devel ppc64le 3.5.1-1.fc30 fedora 10 k bzip2-devel ppc64le 1.0.6-28.fc29 fedora 215 k check-devel ppc64le 0.12.0-3.fc29 fedora 30 k cmake ppc64le 3.12.2-1.fc30 fedora 7.9 M expat-devel ppc64le 2.2.6-1.fc30 fedora 49 k hostname ppc64le 3.20-6.fc29 fedora 28 k libxml2-devel ppc64le 2.9.8-4.fc29 fedora 1.0 M mono-core ppc64le 4.8.0-12.fc28 fedora 16 M perl-ExtUtils-Embed noarch 1.35-425.fc30 fedora 27 k perl-ExtUtils-MakeMaker noarch 1:7.34-418.fc29 fedora 296 k perl-Test noarch 1.31-425.fc30 fedora 38 k perl-Test-Simple noarch 2:1.302140-1.fc29 fedora 509 k perl-devel ppc64le 4:5.28.0-425.fc30 fedora 769 k perl-generators noarch 1.10-10.fc29 fedora 15 k python3-devel ppc64le 3.7.1-2.fc30 fedora 843 k ruby-devel ppc64le 2.5.3-101.fc30 fedora 81 k swig ppc64le 3.0.12-21.fc29 fedora 1.5 M texlive-collection-latexrecommended noarch 8:svn45955-21.fc30 fedora 16 k xerces-c-devel ppc64le 3.2.2-1.fc30 fedora 502 k zlib-devel ppc64le 1.2.11-14.fc30 fedora 46 k Installing dependencies: R-core ppc64le 3.5.1-1.fc30 fedora 55 M R-java-devel ppc64le 3.5.1-1.fc30 fedora 11 k acl ppc64le 2.2.53-2.fc29 fedora 74 k adobe-mappings-cmap noarch 20171205-4.fc29 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20171205-4.fc29 fedora 118 k adobe-mappings-pdf noarch 20180407-2.fc29 fedora 706 k alsa-lib ppc64le 1.1.7-2.fc30 fedora 457 k annobin ppc64le 8.59-1.fc30 fedora 196 k avahi-glib ppc64le 0.7-16.fc29 fedora 14 k avahi-libs ppc64le 0.7-16.fc29 fedora 64 k bc ppc64le 1.07.1-6.fc29 fedora 124 k cairo ppc64le 1.16.0-1.fc30 fedora 731 k check ppc64le 0.12.0-3.fc29 fedora 86 k cmake-data noarch 3.12.2-1.fc30 fedora 1.3 M cmake-filesystem ppc64le 3.12.2-1.fc30 fedora 16 k cmake-rpm-macros noarch 3.12.2-1.fc30 fedora 16 k copy-jdk-configs noarch 3.7-2.fc29 fedora 25 k cpp ppc64le 8.2.1-4.fc30 fedora 10 M cryptsetup-libs ppc64le 2.0.5-1.fc30 fedora 329 k cups ppc64le 1:2.2.8-5.fc30 fedora 1.3 M cups-client ppc64le 1:2.2.8-5.fc30 fedora 71 k cups-filesystem noarch 1:2.2.8-5.fc30 fedora 12 k cups-filters ppc64le 1.21.2-3.fc30 fedora 750 k cups-filters-libs ppc64le 1.21.2-3.fc30 fedora 131 k cups-libs ppc64le 1:2.2.8-5.fc30 fedora 387 k dbus ppc64le 1:1.12.10-6.fc30 fedora 11 k dbus-common noarch 1:1.12.10-6.fc30 fedora 17 k dbus-daemon ppc64le 1:1.12.10-6.fc30 fedora 216 k dbus-libs ppc64le 1:1.12.10-6.fc30 fedora 160 k dbus-tools ppc64le 1:1.12.10-6.fc30 fedora 53 k desktop-file-utils ppc64le 0.23-9.fc29 fedora 77 k device-mapper ppc64le 1.02.152-1.fc30 fedora 153 k device-mapper-libs ppc64le 1.02.152-1.fc30 fedora 188 k emacs-filesystem noarch 1:26.1-7.fc30 fedora 10 k fontconfig ppc64le 2.13.1-1.fc30 fedora 256 k fontconfig-devel ppc64le 2.13.1-1.fc30 fedora 127 k fontpackages-filesystem noarch 1.44-22.fc29 fedora 7.7 k freetype ppc64le 2.9.1-6.fc30 fedora 394 k freetype-devel ppc64le 2.9.1-6.fc30 fedora 441 k fribidi ppc64le 1.0.5-1.fc29 fedora 85 k gcc ppc64le 8.2.1-4.fc30 fedora 21 M gcc-c++ ppc64le 8.2.1-4.fc30 fedora 12 M gcc-gfortran ppc64le 8.2.1-4.fc30 fedora 12 M gettext ppc64le 0.19.8.1-17.fc29 fedora 1.0 M gettext-libs ppc64le 0.19.8.1-17.fc29 fedora 296 k ghostscript ppc64le 9.25-1.fc30 fedora 41 k giflib ppc64le 5.1.4-2.fc29 fedora 50 k glibc-devel ppc64le 2.28.9000-13.fc30 fedora 1.0 M glibc-headers ppc64le 2.28.9000-13.fc30 fedora 463 k gnutls ppc64le 3.6.4-5.fc30 fedora 845 k google-droid-sans-fonts noarch 20120715-14.fc29 fedora 2.5 M graphite2 ppc64le 1.3.10-6.fc30 fedora 116 k groff-base ppc64le 1.22.3-17.fc29 fedora 1.0 M harfbuzz ppc64le 2.1.0-1.fc30 fedora 429 k iptables-libs ppc64le 1.8.0-3.fc29 fedora 60 k isl ppc64le 0.16.1-7.fc29 fedora 1.2 M java-1.8.0-openjdk ppc64le 1:1.8.0.191.b12-8.fc30 fedora 263 k java-1.8.0-openjdk-devel ppc64le 1:1.8.0.191.b12-8.fc30 fedora 7.9 M java-1.8.0-openjdk-headless ppc64le 1:1.8.0.191.b12-8.fc30 fedora 32 M javapackages-filesystem noarch 5.3.0-2.fc30 fedora 12 k jbig2dec-libs ppc64le 0.14-3.fc29 fedora 68 k jbigkit-libs ppc64le 2.1-15.fc30 fedora 52 k json-c ppc64le 0.13.1-3.fc29 fedora 40 k jsoncpp ppc64le 1.8.4-5.fc29 fedora 89 k kernel-headers ppc64le 4.20.0-0.rc1.git0.1.fc30 fedora 1.2 M kmod-libs ppc64le 25-4.fc30 fedora 65 k lcms2 ppc64le 2.9-4.fc30 fedora 167 k less ppc64le 530-2.fc29 fedora 159 k libICE ppc64le 1.0.9-14.fc29 fedora 72 k libRmath ppc64le 3.5.1-1.fc30 fedora 112 k libSM ppc64le 1.2.3-1.fc30 fedora 40 k libX11 ppc64le 1.6.7-1.fc30 fedora 634 k libX11-common noarch 1.6.7-1.fc30 fedora 155 k libX11-devel ppc64le 1.6.7-1.fc30 fedora 974 k libX11-xcb ppc64le 1.6.7-1.fc30 fedora 11 k libXau ppc64le 1.0.8-14.fc29 fedora 30 k libXau-devel ppc64le 1.0.8-14.fc29 fedora 14 k libXaw ppc64le 1.0.13-11.fc29 fedora 191 k libXcomposite ppc64le 0.4.4-15.fc29 fedora 23 k libXcursor ppc64le 1.1.15-4.fc29 fedora 32 k libXext ppc64le 1.3.3-10.fc29 fedora 39 k libXfixes ppc64le 5.0.3-8.fc29 fedora 19 k libXft ppc64le 2.3.2-11.fc29 fedora 63 k libXft-devel ppc64le 2.3.2-11.fc29 fedora 18 k libXi ppc64le 1.7.9-8.fc29 fedora 40 k libXinerama ppc64le 1.1.4-2.fc29 fedora 14 k libXmu ppc64le 1.1.2-12.fc29 fedora 74 k libXpm ppc64le 3.5.12-8.fc29 fedora 61 k libXrandr ppc64le 1.5.1-8.fc29 fedora 27 k libXrender ppc64le 0.9.10-8.fc29 fedora 28 k libXrender-devel ppc64le 0.9.10-8.fc29 fedora 16 k libXt ppc64le 1.1.5-9.fc29 fedora 185 k libXtst ppc64le 1.2.3-8.fc29 fedora 22 k libXxf86misc ppc64le 1.0.4-2.fc29 fedora 21 k libXxf86vm ppc64le 1.1.4-10.fc29 fedora 18 k libargon2 ppc64le 20161029-6.fc29 fedora 31 k libasan ppc64le 8.2.1-4.fc30 fedora 429 k libatomic ppc64le 8.2.1-4.fc30 fedora 40 k libcroco ppc64le 0.6.12-5.fc29 fedora 119 k libdatrie ppc64le 0.2.9-8.fc29 fedora 33 k liberation-fonts-common noarch 1:2.00.3-1.fc29 fedora 14 k liberation-mono-fonts noarch 1:2.00.3-1.fc29 fedora 492 k libexif ppc64le 0.6.21-17.fc29 fedora 353 k libfontenc ppc64le 1.1.3-9.fc29 fedora 30 k libgdiplus ppc64le 5.6-2.fc29 fedora 194 k libgfortran ppc64le 8.2.1-4.fc30 fedora 417 k libgomp ppc64le 8.2.1-4.fc30 fedora 209 k libgs ppc64le 9.25-1.fc30 fedora 3.1 M libicu ppc64le 62.1-2.fc29 fedora 9.0 M libicu-devel ppc64le 62.1-2.fc29 fedora 917 k libidn ppc64le 1.35-3.fc29 fedora 233 k libijs ppc64le 0.35-8.fc29 fedora 29 k libjpeg-turbo ppc64le 2.0.0-1.fc29 fedora 164 k libmcpp ppc64le 2.7.2-21.fc29 fedora 85 k libmpc ppc64le 1.1.0-2.fc29 fedora 62 k libpaper ppc64le 1.1.24-22.fc29 fedora 41 k libpcap ppc64le 14:1.9.0-2.fc29 fedora 158 k libpng ppc64le 2:1.6.35-1.fc30 fedora 120 k libpng-devel ppc64le 2:1.6.35-1.fc30 fedora 312 k libquadmath ppc64le 8.2.1-4.fc30 fedora 190 k libquadmath-devel ppc64le 8.2.1-4.fc30 fedora 42 k libseccomp ppc64le 2.3.3-3.fc29 fedora 66 k libstdc++-devel ppc64le 8.2.1-4.fc30 fedora 2.1 M libthai ppc64le 0.1.28-1.fc29 fedora 200 k libtiff ppc64le 4.0.9-13.fc30 fedora 176 k libubsan ppc64le 8.2.1-4.fc30 fedora 168 k libusbx ppc64le 1.0.22-1.fc29 fedora 68 k libuuid-devel ppc64le 2.33-0.1.fc30 fedora 28 k libuv ppc64le 1:1.23.2-1.fc30 fedora 128 k libxcb ppc64le 1.13.1-1.fc30 fedora 211 k libxcb-devel ppc64le 1.13.1-1.fc30 fedora 1.1 M libxcrypt-devel ppc64le 4.2.3-1.fc30 fedora 26 k libyaml ppc64le 0.2.1-2.fc29 fedora 63 k lksctp-tools ppc64le 1.0.16-10.fc29 fedora 94 k lua ppc64le 5.3.5-2.fc29 fedora 195 k lua-posix ppc64le 33.3.1-11.fc29 fedora 174 k mcpp ppc64le 2.7.2-21.fc29 fedora 27 k mono-data ppc64le 4.8.0-12.fc28 fedora 4.4 M mono-data-sqlite ppc64le 4.8.0-12.fc28 fedora 103 k mono-extras ppc64le 4.8.0-12.fc28 fedora 465 k mono-mvc ppc64le 4.8.0-12.fc28 fedora 484 k mono-wcf ppc64le 4.8.0-12.fc28 fedora 946 k mono-web ppc64le 4.8.0-12.fc28 fedora 2.5 M mono-winforms ppc64le 4.8.0-12.fc28 fedora 1.6 M nettle ppc64le 3.4-7.fc30 fedora 314 k nspr ppc64le 4.20.0-1.fc30 fedora 131 k nss ppc64le 3.39.0-3.fc30 fedora 659 k nss-softokn ppc64le 3.39.0-3.fc30 fedora 373 k nss-softokn-freebl ppc64le 3.39.0-3.fc30 fedora 213 k nss-sysinit ppc64le 3.39.0-3.fc30 fedora 20 k nss-util ppc64le 3.39.0-2.fc30 fedora 86 k openblas-Rblas ppc64le 0.3.3-2.fc30 fedora 2.6 M openjpeg2 ppc64le 2.3.0-9.fc30 fedora 161 k pango ppc64le 1.42.4-1.fc30 fedora 276 k pcre-cpp ppc64le 8.42-5.fc30 fedora 28 k pcre-devel ppc64le 8.42-5.fc30 fedora 532 k pcre-utf16 ppc64le 8.42-5.fc30 fedora 167 k pcre-utf32 ppc64le 8.42-5.fc30 fedora 161 k perl-Carp noarch 1.50-417.fc29 fedora 29 k perl-Data-Dumper ppc64le 2.172-1.fc30 fedora 54 k perl-Devel-PPPort ppc64le 3.43-1.fc30 fedora 113 k perl-Digest noarch 1.17-417.fc29 fedora 24 k perl-Digest-MD5 ppc64le 2.55-417.fc29 fedora 36 k perl-Encode ppc64le 4:2.98-6.fc29 fedora 1.5 M perl-Errno ppc64le 1.29-425.fc30 fedora 24 k perl-Exporter noarch 5.73-418.fc29 fedora 31 k perl-ExtUtils-Command noarch 1:7.34-418.fc29 fedora 14 k perl-ExtUtils-Install noarch 2.14-418.fc29 fedora 45 k 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8:svn20180.0-21.fc30 fedora 29 k texlive-seminar noarch 8:svn34011.1.62-21.fc30 fedora 54 k texlive-sepnum noarch 8:svn20186.2.0-21.fc30 fedora 22 k texlive-setspace noarch 8:svn24881.6.7a-21.fc30 fedora 23 k texlive-showexpl noarch 8:svn42677-21.fc30 fedora 23 k texlive-soul noarch 8:svn15878.2.4-21.fc30 fedora 25 k texlive-subfig noarch 8:svn15878.1.3-21.fc30 fedora 26 k texlive-symbol noarch 8:svn31835.0-21.fc30 fedora 59 k texlive-tetex noarch 7:20180414-25.fc30 fedora 393 k texlive-tex ppc64le 7:20180414-25.fc30 fedora 188 k texlive-tex-gyre noarch 8:svn48058-21.fc30 fedora 8.3 M texlive-tex-gyre-math noarch 8:svn41264-21.fc30 fedora 1.4 M texlive-tex-ini-files noarch 8:svn40533-21.fc30 fedora 20 k texlive-texconfig noarch 7:20180414-25.fc30 fedora 31 k texlive-texlive-common-doc noarch 8:svn44191-21.fc30 fedora 165 k texlive-texlive-docindex noarch 8:svn45575-21.fc30 fedora 149 k texlive-texlive-en noarch 7:20180414-25.fc30 fedora 1.6 M texlive-texlive-msg-translations noarch 8:svn48373-21.fc30 fedora 141 k texlive-texlive-scripts noarch 7:20180414-25.fc30 fedora 33 k texlive-texlive.infra noarch 7:20180414-25.fc30 fedora 161 k texlive-textcase noarch 8:svn15878.0-21.fc30 fedora 20 k texlive-thumbpdf noarch 7:20180414-25.fc30 fedora 43 k texlive-times noarch 8:svn35058.0-21.fc30 fedora 345 k texlive-tipa noarch 8:svn29349.1.3-21.fc30 fedora 2.8 M texlive-titlesec noarch 8:svn40129-21.fc30 fedora 42 k texlive-tools noarch 8:svn47671-21.fc30 fedora 69 k texlive-translator noarch 8:svn46231-21.fc30 fedora 275 k texlive-trimspaces noarch 8:svn15878.1.1-21.fc30 fedora 20 k texlive-txfonts noarch 8:svn15878.0-21.fc30 fedora 774 k texlive-type1cm noarch 8:svn21820.0-21.fc30 fedora 21 k texlive-typehtml noarch 8:svn17134.0-21.fc30 fedora 26 k texlive-ucharcat noarch 8:svn38907-21.fc30 fedora 20 k texlive-ucs noarch 8:svn35853.2.2-21.fc30 fedora 366 k texlive-underscore noarch 8:svn18261.0-21.fc30 fedora 24 k texlive-unicode-data noarch 8:svn48003-21.fc30 fedora 293 k texlive-unicode-math noarch 8:svn48309-21.fc30 fedora 70 k texlive-updmap-map noarch 8:svn48150-21.fc30 fedora 1.4 M texlive-url noarch 8:svn32528.3.4-21.fc30 fedora 25 k texlive-utopia noarch 8:svn15878.0-21.fc30 fedora 233 k texlive-varwidth noarch 8:svn24104.0.92-21.fc30 fedora 23 k texlive-wasy noarch 8:svn35831.0-21.fc30 fedora 41 k texlive-wasy2-ps noarch 8:svn35830.0-21.fc30 fedora 231 k texlive-wasysym noarch 8:svn15878.2.0-21.fc30 fedora 23 k texlive-xcolor noarch 8:svn41044-21.fc30 fedora 38 k texlive-xdvi ppc64le 7:20180414-25.fc30 fedora 354 k texlive-xifthen noarch 8:svn38929-21.fc30 fedora 21 k texlive-xkeyval noarch 8:svn35741.2.7a-21.fc30 fedora 38 k texlive-xltxtra noarch 8:svn39453-21.fc30 fedora 22 k texlive-xunicode noarch 8:svn30466.0.981-21.fc30 fedora 49 k texlive-zapfchan noarch 8:svn31835.0-21.fc30 fedora 107 k texlive-zapfding noarch 8:svn31835.0-21.fc30 fedora 69 k tk ppc64le 1:8.6.8-1.fc29 fedora 1.6 M tk-devel ppc64le 1:8.6.8-1.fc29 fedora 497 k tre ppc64le 0.8.0-23.20140228gitc2f5d13.fc29 fedora 41 k tre-common noarch 0.8.0-23.20140228gitc2f5d13.fc29 fedora 32 k tre-devel ppc64le 0.8.0-23.20140228gitc2f5d13.fc29 fedora 12 k ttmkfdir ppc64le 3.0.9-55.fc29 fedora 54 k tzdata-java noarch 2018e-2.fc29 fedora 151 k urw-base35-bookman-fonts noarch 20170801-11.fc29 fedora 856 k urw-base35-c059-fonts noarch 20170801-11.fc29 fedora 883 k urw-base35-d050000l-fonts noarch 20170801-11.fc29 fedora 78 k urw-base35-fonts noarch 20170801-11.fc29 fedora 11 k urw-base35-fonts-common noarch 20170801-11.fc29 fedora 22 k urw-base35-gothic-fonts noarch 20170801-11.fc29 fedora 653 k urw-base35-nimbus-mono-ps-fonts noarch 20170801-11.fc29 fedora 800 k urw-base35-nimbus-roman-fonts noarch 20170801-11.fc29 fedora 864 k urw-base35-nimbus-sans-fonts noarch 20170801-11.fc29 fedora 1.3 M urw-base35-p052-fonts noarch 20170801-11.fc29 fedora 981 k urw-base35-standard-symbols-ps-fonts noarch 20170801-11.fc29 fedora 43 k urw-base35-z003-fonts noarch 20170801-11.fc29 fedora 279 k vim-minimal ppc64le 2:8.1.511-1.fc30 fedora 592 k xdg-utils noarch 1.1.3-3.fc29 fedora 74 k xerces-c ppc64le 3.2.2-1.fc30 fedora 956 k xorg-x11-font-utils ppc64le 1:7.5-40.fc29 fedora 105 k xorg-x11-fonts-Type1 noarch 7.5-20.fc29 fedora 517 k xorg-x11-proto-devel noarch 2018.4-2.fc29 fedora 280 k xorg-x11-server-utils ppc64le 7.7-27.fc30 fedora 191 k xz-devel ppc64le 5.2.4-3.fc29 fedora 56 k zziplib ppc64le 0.13.69-1.fc29 fedora 89 k Transaction Summary ================================================================================ Install 523 Packages Total download size: 454 M Installed size: 1.2 G Downloading Packages: -------------------------------------------------------------------------------- Total 63 MB/s | 454 MB 00:07 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Setting system policy to DEFAULT updmap [WARNING]: resetting $HOME value (was /builddir) to root's actual home (/root). Installed: R-core-devel.ppc64le 3.5.1-1.fc30 R-devel.ppc64le 3.5.1-1.fc30 bzip2-devel.ppc64le 1.0.6-28.fc29 check-devel.ppc64le 0.12.0-3.fc29 cmake.ppc64le 3.12.2-1.fc30 expat-devel.ppc64le 2.2.6-1.fc30 hostname.ppc64le 3.20-6.fc29 libxml2-devel.ppc64le 2.9.8-4.fc29 mono-core.ppc64le 4.8.0-12.fc28 perl-ExtUtils-Embed.noarch 1.35-425.fc30 perl-ExtUtils-MakeMaker.noarch 1:7.34-418.fc29 perl-Test.noarch 1.31-425.fc30 perl-Test-Simple.noarch 2:1.302140-1.fc29 perl-devel.ppc64le 4:5.28.0-425.fc30 perl-generators.noarch 1.10-10.fc29 python3-devel.ppc64le 3.7.1-2.fc30 ruby-devel.ppc64le 2.5.3-101.fc30 swig.ppc64le 3.0.12-21.fc29 texlive-collection-latexrecommended.noarch 8:svn45955-21.fc30 xerces-c-devel.ppc64le 3.2.2-1.fc30 zlib-devel.ppc64le 1.2.11-14.fc30 R-core.ppc64le 3.5.1-1.fc30 R-java-devel.ppc64le 3.5.1-1.fc30 acl.ppc64le 2.2.53-2.fc29 adobe-mappings-cmap.noarch 20171205-4.fc29 adobe-mappings-cmap-deprecated.noarch 20171205-4.fc29 adobe-mappings-pdf.noarch 20180407-2.fc29 alsa-lib.ppc64le 1.1.7-2.fc30 annobin.ppc64le 8.59-1.fc30 avahi-glib.ppc64le 0.7-16.fc29 avahi-libs.ppc64le 0.7-16.fc29 bc.ppc64le 1.07.1-6.fc29 cairo.ppc64le 1.16.0-1.fc30 check.ppc64le 0.12.0-3.fc29 cmake-data.noarch 3.12.2-1.fc30 cmake-filesystem.ppc64le 3.12.2-1.fc30 cmake-rpm-macros.noarch 3.12.2-1.fc30 copy-jdk-configs.noarch 3.7-2.fc29 cpp.ppc64le 8.2.1-4.fc30 cryptsetup-libs.ppc64le 2.0.5-1.fc30 cups.ppc64le 1:2.2.8-5.fc30 cups-client.ppc64le 1:2.2.8-5.fc30 cups-filesystem.noarch 1:2.2.8-5.fc30 cups-filters.ppc64le 1.21.2-3.fc30 cups-filters-libs.ppc64le 1.21.2-3.fc30 cups-libs.ppc64le 1:2.2.8-5.fc30 dbus.ppc64le 1:1.12.10-6.fc30 dbus-common.noarch 1:1.12.10-6.fc30 dbus-daemon.ppc64le 1:1.12.10-6.fc30 dbus-libs.ppc64le 1:1.12.10-6.fc30 dbus-tools.ppc64le 1:1.12.10-6.fc30 desktop-file-utils.ppc64le 0.23-9.fc29 device-mapper.ppc64le 1.02.152-1.fc30 device-mapper-libs.ppc64le 1.02.152-1.fc30 emacs-filesystem.noarch 1:26.1-7.fc30 fontconfig.ppc64le 2.13.1-1.fc30 fontconfig-devel.ppc64le 2.13.1-1.fc30 fontpackages-filesystem.noarch 1.44-22.fc29 freetype.ppc64le 2.9.1-6.fc30 freetype-devel.ppc64le 2.9.1-6.fc30 fribidi.ppc64le 1.0.5-1.fc29 gcc.ppc64le 8.2.1-4.fc30 gcc-c++.ppc64le 8.2.1-4.fc30 gcc-gfortran.ppc64le 8.2.1-4.fc30 gettext.ppc64le 0.19.8.1-17.fc29 gettext-libs.ppc64le 0.19.8.1-17.fc29 ghostscript.ppc64le 9.25-1.fc30 giflib.ppc64le 5.1.4-2.fc29 glibc-devel.ppc64le 2.28.9000-13.fc30 glibc-headers.ppc64le 2.28.9000-13.fc30 gnutls.ppc64le 3.6.4-5.fc30 google-droid-sans-fonts.noarch 20120715-14.fc29 graphite2.ppc64le 1.3.10-6.fc30 groff-base.ppc64le 1.22.3-17.fc29 harfbuzz.ppc64le 2.1.0-1.fc30 iptables-libs.ppc64le 1.8.0-3.fc29 isl.ppc64le 0.16.1-7.fc29 java-1.8.0-openjdk.ppc64le 1:1.8.0.191.b12-8.fc30 java-1.8.0-openjdk-devel.ppc64le 1:1.8.0.191.b12-8.fc30 java-1.8.0-openjdk-headless.ppc64le 1:1.8.0.191.b12-8.fc30 javapackages-filesystem.noarch 5.3.0-2.fc30 jbig2dec-libs.ppc64le 0.14-3.fc29 jbigkit-libs.ppc64le 2.1-15.fc30 json-c.ppc64le 0.13.1-3.fc29 jsoncpp.ppc64le 1.8.4-5.fc29 kernel-headers.ppc64le 4.20.0-0.rc1.git0.1.fc30 kmod-libs.ppc64le 25-4.fc30 lcms2.ppc64le 2.9-4.fc30 less.ppc64le 530-2.fc29 libICE.ppc64le 1.0.9-14.fc29 libRmath.ppc64le 3.5.1-1.fc30 libSM.ppc64le 1.2.3-1.fc30 libX11.ppc64le 1.6.7-1.fc30 libX11-common.noarch 1.6.7-1.fc30 libX11-devel.ppc64le 1.6.7-1.fc30 libX11-xcb.ppc64le 1.6.7-1.fc30 libXau.ppc64le 1.0.8-14.fc29 libXau-devel.ppc64le 1.0.8-14.fc29 libXaw.ppc64le 1.0.13-11.fc29 libXcomposite.ppc64le 0.4.4-15.fc29 libXcursor.ppc64le 1.1.15-4.fc29 libXext.ppc64le 1.3.3-10.fc29 libXfixes.ppc64le 5.0.3-8.fc29 libXft.ppc64le 2.3.2-11.fc29 libXft-devel.ppc64le 2.3.2-11.fc29 libXi.ppc64le 1.7.9-8.fc29 libXinerama.ppc64le 1.1.4-2.fc29 libXmu.ppc64le 1.1.2-12.fc29 libXpm.ppc64le 3.5.12-8.fc29 libXrandr.ppc64le 1.5.1-8.fc29 libXrender.ppc64le 0.9.10-8.fc29 libXrender-devel.ppc64le 0.9.10-8.fc29 libXt.ppc64le 1.1.5-9.fc29 libXtst.ppc64le 1.2.3-8.fc29 libXxf86misc.ppc64le 1.0.4-2.fc29 libXxf86vm.ppc64le 1.1.4-10.fc29 libargon2.ppc64le 20161029-6.fc29 libasan.ppc64le 8.2.1-4.fc30 libatomic.ppc64le 8.2.1-4.fc30 libcroco.ppc64le 0.6.12-5.fc29 libdatrie.ppc64le 0.2.9-8.fc29 liberation-fonts-common.noarch 1:2.00.3-1.fc29 liberation-mono-fonts.noarch 1:2.00.3-1.fc29 libexif.ppc64le 0.6.21-17.fc29 libfontenc.ppc64le 1.1.3-9.fc29 libgdiplus.ppc64le 5.6-2.fc29 libgfortran.ppc64le 8.2.1-4.fc30 libgomp.ppc64le 8.2.1-4.fc30 libgs.ppc64le 9.25-1.fc30 libicu.ppc64le 62.1-2.fc29 libicu-devel.ppc64le 62.1-2.fc29 libidn.ppc64le 1.35-3.fc29 libijs.ppc64le 0.35-8.fc29 libjpeg-turbo.ppc64le 2.0.0-1.fc29 libmcpp.ppc64le 2.7.2-21.fc29 libmpc.ppc64le 1.1.0-2.fc29 libpaper.ppc64le 1.1.24-22.fc29 libpcap.ppc64le 14:1.9.0-2.fc29 libpng.ppc64le 2:1.6.35-1.fc30 libpng-devel.ppc64le 2:1.6.35-1.fc30 libquadmath.ppc64le 8.2.1-4.fc30 libquadmath-devel.ppc64le 8.2.1-4.fc30 libseccomp.ppc64le 2.3.3-3.fc29 libstdc++-devel.ppc64le 8.2.1-4.fc30 libthai.ppc64le 0.1.28-1.fc29 libtiff.ppc64le 4.0.9-13.fc30 libubsan.ppc64le 8.2.1-4.fc30 libusbx.ppc64le 1.0.22-1.fc29 libuuid-devel.ppc64le 2.33-0.1.fc30 libuv.ppc64le 1:1.23.2-1.fc30 libxcb.ppc64le 1.13.1-1.fc30 libxcb-devel.ppc64le 1.13.1-1.fc30 libxcrypt-devel.ppc64le 4.2.3-1.fc30 libyaml.ppc64le 0.2.1-2.fc29 lksctp-tools.ppc64le 1.0.16-10.fc29 lua.ppc64le 5.3.5-2.fc29 lua-posix.ppc64le 33.3.1-11.fc29 mcpp.ppc64le 2.7.2-21.fc29 mono-data.ppc64le 4.8.0-12.fc28 mono-data-sqlite.ppc64le 4.8.0-12.fc28 mono-extras.ppc64le 4.8.0-12.fc28 mono-mvc.ppc64le 4.8.0-12.fc28 mono-wcf.ppc64le 4.8.0-12.fc28 mono-web.ppc64le 4.8.0-12.fc28 mono-winforms.ppc64le 4.8.0-12.fc28 nettle.ppc64le 3.4-7.fc30 nspr.ppc64le 4.20.0-1.fc30 nss.ppc64le 3.39.0-3.fc30 nss-softokn.ppc64le 3.39.0-3.fc30 nss-softokn-freebl.ppc64le 3.39.0-3.fc30 nss-sysinit.ppc64le 3.39.0-3.fc30 nss-util.ppc64le 3.39.0-2.fc30 openblas-Rblas.ppc64le 0.3.3-2.fc30 openjpeg2.ppc64le 2.3.0-9.fc30 pango.ppc64le 1.42.4-1.fc30 pcre-cpp.ppc64le 8.42-5.fc30 pcre-devel.ppc64le 8.42-5.fc30 pcre-utf16.ppc64le 8.42-5.fc30 pcre-utf32.ppc64le 8.42-5.fc30 perl-Carp.noarch 1.50-417.fc29 perl-Data-Dumper.ppc64le 2.172-1.fc30 perl-Devel-PPPort.ppc64le 3.43-1.fc30 perl-Digest.noarch 1.17-417.fc29 perl-Digest-MD5.ppc64le 2.55-417.fc29 perl-Encode.ppc64le 4:2.98-6.fc29 perl-Errno.ppc64le 1.29-425.fc30 perl-Exporter.noarch 5.73-418.fc29 perl-ExtUtils-Command.noarch 1:7.34-418.fc29 perl-ExtUtils-Install.noarch 2.14-418.fc29 perl-ExtUtils-Manifest.noarch 1:1.71-3.fc29 perl-ExtUtils-ParseXS.noarch 1:3.39-417.fc29 perl-Fedora-VSP.noarch 0.001-12.fc29 perl-File-Path.noarch 2.16-1.fc30 perl-File-Temp.noarch 1:0.230.800-2.fc29 perl-Filter.ppc64le 2:1.59-1.fc29 perl-Getopt-Long.noarch 1:2.50-417.fc29 perl-HTTP-Tiny.noarch 0.076-1.fc29 perl-IO.ppc64le 1.39-425.fc30 perl-MIME-Base64.ppc64le 3.15-417.fc29 perl-PathTools.ppc64le 3.75-1.fc30 perl-Pod-Escapes.noarch 1:1.07-417.fc29 perl-Pod-Perldoc.noarch 3.28.01-418.fc29 perl-Pod-Simple.noarch 1:3.35-417.fc29 perl-Pod-Usage.noarch 4:1.69-417.fc29 perl-Scalar-List-Utils.ppc64le 3:1.50-417.fc29 perl-Socket.ppc64le 4:2.027-417.fc29 perl-Storable.ppc64le 1:3.11-5.fc30 perl-Term-ANSIColor.noarch 4.06-418.fc29 perl-Term-Cap.noarch 1.17-417.fc29 perl-Test-Harness.noarch 1:3.42-418.fc29 perl-Text-ParseWords.noarch 3.30-417.fc29 perl-Text-Tabs+Wrap.noarch 2013.0523-417.fc29 perl-Text-Unidecode.noarch 1.30-7.fc29 perl-Time-Local.noarch 2:1.280-3.fc29 perl-Unicode-EastAsianWidth.noarch 1.33-14.fc29 perl-Unicode-Normalize.ppc64le 1.26-417.fc29 perl-XML-Parser.ppc64le 2.44-13.fc29 perl-XML-XPath.noarch 1.44-1.fc30 perl-constant.noarch 1.33-418.fc29 perl-encoding.ppc64le 4:2.22-6.fc29 perl-interpreter.ppc64le 4:5.28.0-425.fc30 perl-libintl-perl.ppc64le 1.29-5.fc29 perl-libs.ppc64le 4:5.28.0-425.fc30 perl-macros.ppc64le 4:5.28.0-425.fc30 perl-open.noarch 1.11-425.fc30 perl-parent.noarch 1:0.237-2.fc29 perl-podlators.noarch 1:4.11-3.fc29 perl-threads.ppc64le 1:2.22-417.fc29 perl-threads-shared.ppc64le 1.58-417.fc29 perl-version.ppc64le 7:0.99.24-5.fc29 pixman.ppc64le 0.34.0-10.fc29 poppler.ppc64le 0.67.0-2.fc30 poppler-data.noarch 0.4.9-2.fc29 poppler-utils.ppc64le 0.67.0-2.fc30 python-rpm-macros.noarch 3-39.fc30 python3.ppc64le 3.7.1-2.fc30 python3-pyparsing.noarch 2.2.0-3.fc29 python3-rpm-generators.noarch 6-1.fc30 python3-rpm-macros.noarch 3-39.fc30 python3-setuptools.noarch 40.4.3-1.fc30 qpdf.ppc64le 8.2.1-1.fc30 qpdf-libs.ppc64le 8.2.1-1.fc30 qrencode-libs.ppc64le 3.4.4-6.fc29 rhash.ppc64le 1.3.5-3.fc29 ruby.ppc64le 2.5.3-101.fc30 ruby-libs.ppc64le 2.5.3-101.fc30 rubygem-openssl.ppc64le 2.1.2-101.fc30 rubygem-psych.ppc64le 3.0.2-101.fc30 rubygems.noarch 2.7.6-101.fc30 rubypick.noarch 1.1.1-9.fc29 sqlite.ppc64le 3.25.2-1.fc30 subunit.ppc64le 1.3.0-2.fc29 subunit-devel.ppc64le 1.3.0-2.fc29 systemd.ppc64le 239-8.git9f3aed1.fc30 systemd-pam.ppc64le 239-8.git9f3aed1.fc30 systemd-rpm-macros.noarch 239-8.git9f3aed1.fc30 systemtap-sdt-devel.ppc64le 4.0-2.fc30 tcl.ppc64le 1:8.6.8-2.fc29 tcl-devel.ppc64le 1:8.6.8-2.fc29 texinfo.ppc64le 6.5-11.fc30 texinfo-tex.ppc64le 6.5-11.fc30 texlive-ae.noarch 8:svn15878.1.4-21.fc30 texlive-algorithms.noarch 8:svn42428-21.fc30 texlive-amscls.noarch 8:svn46099-21.fc30 texlive-amsfonts.noarch 8:svn29208.3.04-21.fc30 texlive-amsmath.noarch 8:svn47349-21.fc30 texlive-anysize.noarch 8:svn15878.0-21.fc30 texlive-attachfile.noarch 8:svn42099-21.fc30 texlive-auto-pst-pdf.noarch 8:svn23723.0.6-21.fc30 texlive-avantgar.noarch 8:svn31835.0-21.fc30 texlive-babel.noarch 8:svn47932-21.fc30 texlive-babel-english.noarch 8:svn44495-21.fc30 texlive-babelbib.noarch 8:svn25245.1.31-21.fc30 texlive-base.ppc64le 7:20180414-25.fc30 texlive-beamer.noarch 8:svn46705-21.fc30 texlive-bera.noarch 8:svn20031.0-21.fc30 texlive-beton.noarch 8:svn15878.0-21.fc30 texlive-bibtex.ppc64le 7:20180414-25.fc30 texlive-bidi.noarch 8:svn48397-21.fc30 texlive-bookman.noarch 8:svn31835.0-21.fc30 texlive-booktabs.noarch 8:svn40846-21.fc30 texlive-breakurl.noarch 8:svn29901.1.40-21.fc30 texlive-breqn.noarch 8:svn43071-21.fc30 texlive-caption.noarch 8:svn47968-21.fc30 texlive-carlisle.noarch 8:svn47876-21.fc30 texlive-changepage.noarch 8:svn15878.1.0c-21.fc30 texlive-charter.noarch 8:svn15878.0-21.fc30 texlive-chngcntr.noarch 8:svn47577-21.fc30 texlive-cite.noarch 8:svn36428.5.5-21.fc30 texlive-cm.noarch 8:svn45811-21.fc30 texlive-cm-super.noarch 8:svn15878.0-21.fc30 texlive-cmap.noarch 8:svn42428-21.fc30 texlive-cmextra.noarch 8:svn42428-21.fc30 texlive-collection-basic.noarch 8:svn45851-21.fc30 texlive-collection-fontsrecommended.noarch 8:svn35830.0-21.fc30 texlive-collection-latex.noarch 8:svn41614-21.fc30 texlive-colortbl.noarch 8:svn47614-21.fc30 texlive-courier.noarch 8:svn35058.0-21.fc30 texlive-crop.noarch 8:svn15878.1.5-21.fc30 texlive-csquotes.noarch 8:svn47564-21.fc30 texlive-ctable.noarch 8:svn38672-21.fc30 texlive-currfile.noarch 8:svn40725-21.fc30 texlive-dvipdfmx.ppc64le 7:20180414-25.fc30 texlive-dvips.ppc64le 7:20180414-25.fc30 texlive-ec.noarch 8:svn25033.1.0-21.fc30 texlive-enctex.noarch 8:svn34957.0-21.fc30 texlive-enumitem.noarch 8:svn24146.3.5.2-21.fc30 texlive-environ.noarch 8:svn33821.0.3-21.fc30 texlive-epsf.noarch 8:svn21461.2.7.4-21.fc30 texlive-eso-pic.noarch 8:svn47694-21.fc30 texlive-etex.noarch 8:svn37057.0-21.fc30 texlive-etex-pkg.noarch 8:svn41784-21.fc30 texlive-etoolbox.noarch 8:svn46602-21.fc30 texlive-euenc.noarch 8:svn19795.0.1h-21.fc30 texlive-euler.noarch 8:svn42428-21.fc30 texlive-euro.noarch 8:svn22191.1.1-21.fc30 texlive-euro-ce.noarch 8:svn25714-21.fc30 texlive-eurosym.noarch 8:svn17265.1.4_subrfix-21.fc30 texlive-extsizes.noarch 8:svn17263.1.4a-21.fc30 texlive-fancybox.noarch 8:svn18304.1.4-21.fc30 texlive-fancyhdr.noarch 8:svn44730-21.fc30 texlive-fancyref.noarch 8:svn15878.0.9c-21.fc30 texlive-fancyvrb.noarch 8:svn18492.2.8-21.fc30 texlive-filecontents.noarch 8:svn47890-21.fc30 texlive-filehook.noarch 8:svn24280.0.5d-21.fc30 texlive-finstrut.noarch 8:svn21719.0.5-21.fc30 texlive-fix2col.noarch 8:svn38770-21.fc30 texlive-float.noarch 8:svn15878.1.3d-21.fc30 texlive-fontspec.noarch 8:svn48320-21.fc30 texlive-footmisc.noarch 8:svn23330.5.5b-21.fc30 texlive-fp.noarch 8:svn15878.0-21.fc30 texlive-fpl.noarch 8:svn15878.1.002-21.fc30 texlive-geometry.noarch 8:svn47638-21.fc30 texlive-glyphlist.noarch 7:20180414-25.fc30 texlive-graphics.noarch 8:svn47350-21.fc30 texlive-graphics-cfg.noarch 8:svn40269-21.fc30 texlive-graphics-def.noarch 8:svn46267-21.fc30 texlive-gsftopk.ppc64le 7:20180414-25.fc30 texlive-helvetic.noarch 8:svn31835.0-21.fc30 texlive-hyperref.noarch 8:svn46583-21.fc30 texlive-hyph-utf8.noarch 8:svn48290-21.fc30 texlive-hyphen-base.noarch 8:svn48303-21.fc30 texlive-ifetex.noarch 8:svn47231-21.fc30 texlive-ifluatex.noarch 8:svn47293-21.fc30 texlive-ifmtarg.noarch 8:svn47544-21.fc30 texlive-ifplatform.noarch 8:svn45533-21.fc30 texlive-iftex.noarch 8:svn29654.0.2-21.fc30 texlive-ifxetex.noarch 8:svn19685.0.5-21.fc30 texlive-inconsolata.noarch 8:svn46319-21.fc30 texlive-index.noarch 8:svn24099.4.1beta-21.fc30 texlive-jknapltx.noarch 8:svn19440.0-21.fc30 texlive-kastrup.noarch 8:svn15878.0-21.fc30 texlive-knuth-lib.noarch 8:svn35820.0-21.fc30 texlive-knuth-local.noarch 8:svn38627-21.fc30 texlive-koma-script.noarch 8:svn47249-21.fc30 texlive-kpathsea.ppc64le 7:20180414-25.fc30 texlive-l3experimental.noarch 8:svn47705-21.fc30 texlive-l3kernel.noarch 8:svn48022-21.fc30 texlive-l3packages.noarch 8:svn47705-21.fc30 texlive-latex.noarch 7:20180414-25.fc30 texlive-latex-fonts.noarch 8:svn28888.0-21.fc30 texlive-latexbug.noarch 8:svn45559-21.fc30 texlive-latexconfig.noarch 8:svn45777-21.fc30 texlive-lib.ppc64le 7:20180414-25.fc30 texlive-lineno.noarch 8:svn21442.4.41-21.fc30 texlive-listings.noarch 8:svn37534.1.6-21.fc30 texlive-lm.noarch 8:svn48145-21.fc30 texlive-lm-math.noarch 8:svn36915.1.959-21.fc30 texlive-ltabptch.noarch 8:svn17533.1.74d-21.fc30 texlive-ltxmisc.noarch 8:svn21927.0-21.fc30 texlive-lua-alt-getopt.noarch 8:svn29349.0.7.0-21.fc30 texlive-luabidi.noarch 8:svn30790.0.2-21.fc30 texlive-lualatex-math.noarch 8:svn44621-21.fc30 texlive-lualibs.noarch 8:svn43153-21.fc30 texlive-luaotfload.noarch 7:20180414-25.fc30 texlive-luatex.ppc64le 7:20180414-25.fc30 texlive-luatexbase.noarch 8:svn38550-21.fc30 texlive-lwarp.noarch 7:20180414-25.fc30 texlive-makecmds.noarch 8:svn15878.0-21.fc30 texlive-makeindex.ppc64le 7:20180414-25.fc30 texlive-manfnt-font.noarch 8:svn45777-21.fc30 texlive-marginnote.noarch 8:svn48383-21.fc30 texlive-marvosym.noarch 8:svn29349.2.2a-21.fc30 texlive-mathpazo.noarch 8:svn15878.1.003-21.fc30 texlive-mathspec.noarch 8:svn42773-21.fc30 texlive-mathtools.noarch 8:svn46250-21.fc30 texlive-mdwtools.noarch 8:svn15878.1.05.4-21.fc30 texlive-memoir.noarch 8:svn47305-21.fc30 texlive-metafont.ppc64le 7:20180414-25.fc30 texlive-metalogo.noarch 8:svn18611.0.12-21.fc30 texlive-mflogo.noarch 8:svn42428-21.fc30 texlive-mflogo-font.noarch 8:svn36898.1.002-21.fc30 texlive-mfnfss.noarch 8:svn46036-21.fc30 texlive-mfware.ppc64le 7:20180414-25.fc30 texlive-microtype.noarch 8:svn46323-21.fc30 texlive-mnsymbol.noarch 8:svn18651.1.4-21.fc30 texlive-mparhack.noarch 8:svn15878.1.4-21.fc30 texlive-mptopdf.noarch 7:20180414-25.fc30 texlive-ms.noarch 8:svn42428-21.fc30 texlive-multido.noarch 8:svn18302.1.42-21.fc30 texlive-natbib.noarch 8:svn20668.8.31b-21.fc30 texlive-ncntrsbk.noarch 8:svn31835.0-21.fc30 texlive-ntgclass.noarch 8:svn15878.2.1a-21.fc30 texlive-oberdiek.noarch 7:20180414-25.fc30 texlive-palatino.noarch 8:svn31835.0-21.fc30 texlive-paralist.noarch 8:svn43021-21.fc30 texlive-parallel.noarch 8:svn15878.0-21.fc30 texlive-parskip.noarch 8:svn19963.2.0-21.fc30 texlive-pdfpages.noarch 8:svn45659-21.fc30 texlive-pdftex.ppc64le 7:20180414-25.fc30 texlive-pgf.noarch 8:svn44231-21.fc30 texlive-placeins.noarch 8:svn19848.2.2-21.fc30 texlive-plain.noarch 8:svn43076-21.fc30 texlive-polyglossia.noarch 8:svn47392-21.fc30 texlive-powerdot.noarch 8:svn45165-21.fc30 texlive-psfrag.noarch 8:svn15878.3.04-21.fc30 texlive-pslatex.noarch 8:svn16416.0-21.fc30 texlive-psnfss.noarch 8:svn33946.9.2a-21.fc30 texlive-pspicture.noarch 8:svn15878.0-21.fc30 texlive-pst-3d.noarch 8:svn17257.1.10-21.fc30 texlive-pst-blur.noarch 8:svn15878.2.0-21.fc30 texlive-pst-coil.noarch 8:svn37377.1.07-21.fc30 texlive-pst-eps.noarch 8:svn15878.1.0-21.fc30 texlive-pst-fill.noarch 8:svn15878.1.01-21.fc30 texlive-pst-grad.noarch 8:svn15878.1.06-21.fc30 texlive-pst-math.noarch 8:svn34786.0.63-21.fc30 texlive-pst-node.noarch 8:svn46170-21.fc30 texlive-pst-ovl.noarch 8:svn45506-21.fc30 texlive-pst-pdf.noarch 7:20180414-25.fc30 texlive-pst-plot.noarch 8:svn47163-21.fc30 texlive-pst-slpe.noarch 8:svn24391.1.31-21.fc30 texlive-pst-text.noarch 8:svn15878.1.00-21.fc30 texlive-pst-tools.noarch 8:svn45978-21.fc30 texlive-pst-tree.noarch 8:svn43272-21.fc30 texlive-pstricks.noarch 8:svn48256-21.fc30 texlive-pstricks-add.noarch 8:svn46541-21.fc30 texlive-pxfonts.noarch 8:svn15878.0-21.fc30 texlive-qstest.noarch 8:svn15878.0-21.fc30 texlive-rcs.noarch 8:svn15878.0-21.fc30 texlive-realscripts.noarch 8:svn39706-21.fc30 texlive-rsfs.noarch 8:svn15878.0-21.fc30 texlive-sansmath.noarch 8:svn17997.1.1-21.fc30 texlive-sansmathaccent.noarch 8:svn30187.0-21.fc30 texlive-sauerj.noarch 8:svn15878.0-21.fc30 texlive-section.noarch 8:svn20180.0-21.fc30 texlive-seminar.noarch 8:svn34011.1.62-21.fc30 texlive-sepnum.noarch 8:svn20186.2.0-21.fc30 texlive-setspace.noarch 8:svn24881.6.7a-21.fc30 texlive-showexpl.noarch 8:svn42677-21.fc30 texlive-soul.noarch 8:svn15878.2.4-21.fc30 texlive-subfig.noarch 8:svn15878.1.3-21.fc30 texlive-symbol.noarch 8:svn31835.0-21.fc30 texlive-tetex.noarch 7:20180414-25.fc30 texlive-tex.ppc64le 7:20180414-25.fc30 texlive-tex-gyre.noarch 8:svn48058-21.fc30 texlive-tex-gyre-math.noarch 8:svn41264-21.fc30 texlive-tex-ini-files.noarch 8:svn40533-21.fc30 texlive-texconfig.noarch 7:20180414-25.fc30 texlive-texlive-common-doc.noarch 8:svn44191-21.fc30 texlive-texlive-docindex.noarch 8:svn45575-21.fc30 texlive-texlive-en.noarch 7:20180414-25.fc30 texlive-texlive-msg-translations.noarch 8:svn48373-21.fc30 texlive-texlive-scripts.noarch 7:20180414-25.fc30 texlive-texlive.infra.noarch 7:20180414-25.fc30 texlive-textcase.noarch 8:svn15878.0-21.fc30 texlive-thumbpdf.noarch 7:20180414-25.fc30 texlive-times.noarch 8:svn35058.0-21.fc30 texlive-tipa.noarch 8:svn29349.1.3-21.fc30 texlive-titlesec.noarch 8:svn40129-21.fc30 texlive-tools.noarch 8:svn47671-21.fc30 texlive-translator.noarch 8:svn46231-21.fc30 texlive-trimspaces.noarch 8:svn15878.1.1-21.fc30 texlive-txfonts.noarch 8:svn15878.0-21.fc30 texlive-type1cm.noarch 8:svn21820.0-21.fc30 texlive-typehtml.noarch 8:svn17134.0-21.fc30 texlive-ucharcat.noarch 8:svn38907-21.fc30 texlive-ucs.noarch 8:svn35853.2.2-21.fc30 texlive-underscore.noarch 8:svn18261.0-21.fc30 texlive-unicode-data.noarch 8:svn48003-21.fc30 texlive-unicode-math.noarch 8:svn48309-21.fc30 texlive-updmap-map.noarch 8:svn48150-21.fc30 texlive-url.noarch 8:svn32528.3.4-21.fc30 texlive-utopia.noarch 8:svn15878.0-21.fc30 texlive-varwidth.noarch 8:svn24104.0.92-21.fc30 texlive-wasy.noarch 8:svn35831.0-21.fc30 texlive-wasy2-ps.noarch 8:svn35830.0-21.fc30 texlive-wasysym.noarch 8:svn15878.2.0-21.fc30 texlive-xcolor.noarch 8:svn41044-21.fc30 texlive-xdvi.ppc64le 7:20180414-25.fc30 texlive-xifthen.noarch 8:svn38929-21.fc30 texlive-xkeyval.noarch 8:svn35741.2.7a-21.fc30 texlive-xltxtra.noarch 8:svn39453-21.fc30 texlive-xunicode.noarch 8:svn30466.0.981-21.fc30 texlive-zapfchan.noarch 8:svn31835.0-21.fc30 texlive-zapfding.noarch 8:svn31835.0-21.fc30 tk.ppc64le 1:8.6.8-1.fc29 tk-devel.ppc64le 1:8.6.8-1.fc29 tre.ppc64le 0.8.0-23.20140228gitc2f5d13.fc29 tre-common.noarch 0.8.0-23.20140228gitc2f5d13.fc29 tre-devel.ppc64le 0.8.0-23.20140228gitc2f5d13.fc29 ttmkfdir.ppc64le 3.0.9-55.fc29 tzdata-java.noarch 2018e-2.fc29 urw-base35-bookman-fonts.noarch 20170801-11.fc29 urw-base35-c059-fonts.noarch 20170801-11.fc29 urw-base35-d050000l-fonts.noarch 20170801-11.fc29 urw-base35-fonts.noarch 20170801-11.fc29 urw-base35-fonts-common.noarch 20170801-11.fc29 urw-base35-gothic-fonts.noarch 20170801-11.fc29 urw-base35-nimbus-mono-ps-fonts.noarch 20170801-11.fc29 urw-base35-nimbus-roman-fonts.noarch 20170801-11.fc29 urw-base35-nimbus-sans-fonts.noarch 20170801-11.fc29 urw-base35-p052-fonts.noarch 20170801-11.fc29 urw-base35-standard-symbols-ps-fonts.noarch 20170801-11.fc29 urw-base35-z003-fonts.noarch 20170801-11.fc29 vim-minimal.ppc64le 2:8.1.511-1.fc30 xdg-utils.noarch 1.1.3-3.fc29 xerces-c.ppc64le 3.2.2-1.fc30 xorg-x11-font-utils.ppc64le 1:7.5-40.fc29 xorg-x11-fonts-Type1.noarch 7.5-20.fc29 xorg-x11-proto-devel.noarch 2018.4-2.fc29 xorg-x11-server-utils.ppc64le 7.7-27.fc30 xz-devel.ppc64le 5.2.4-3.fc29 zziplib.ppc64le 0.13.69-1.fc29 Complete! Finish: build setup for libsbml-5.17.0-11.fc30.src.rpm Start: rpmbuild libsbml-5.17.0-11.fc30.src.rpm Building target platforms: ppc64le Building for target ppc64le Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.GTIIgl + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSBML-5.17.0-Source + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/libSBML-5.17.0-core-plus-packages-src.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd libSBML-5.17.0-Source + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #1 (libsbml-fix_install_libpaths.patch):' Patch #1 (libsbml-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/bindings/ruby/CMakeLists.txt patching file src/bindings/csharp/CMakeLists.txt patching file src/bindings/octave/CMakeLists.txt patching file src/bindings/perl/CMakeLists.txt + echo 'Patch #3 (libsbml-5.17.0-fix_bug463.patch):' Patch #3 (libsbml-5.17.0-fix_bug463.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/sbml/Compartment.cpp + echo 'Patch #2 (libsbml-5.17.0-swigdoc_fix.patch):' Patch #2 (libsbml-5.17.0-swigdoc_fix.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/bindings/swig/swigdoc.py Hunk #3 succeeded at 458 (offset -1 lines). Hunk #4 succeeded at 814 (offset -1 lines). Hunk #5 succeeded at 955 (offset -1 lines). Hunk #6 succeeded at 1576 (offset -1 lines). Hunk #7 succeeded at 1847 (offset -1 lines). Hunk #8 succeeded at 1908 (offset -1 lines). Hunk #9 succeeded at 1930 (offset -1 lines). + unzip -n /builddir/build/SOURCES/libSBML-5.17.0-render-src.zip Archive: /builddir/build/SOURCES/libSBML-5.17.0-render-src.zip + iconv -f latin1 -t utf8 NEWS.txt + touch -r NEWS.txt t + mv t NEWS.txt ++ find docs/src/filters -type f '(' -name '*.py' ')' + for i in `find docs/src/filters -type f $ -name "*.py" $` + sed -i -r 's|(#!/usr/bin/env python) +#.*|#!/usr/bin/python2|' docs/src/filters/doc-filter-csharp.py + for i in `find docs/src/filters -type f $ -name "*.py" $` + sed -i -r 's|(#!/usr/bin/env python) +#.*|#!/usr/bin/python2|' docs/src/filters/doc-filter-c.py + for i in `find docs/src/filters -type f $ -name "*.py" $` + sed -i -r 's|(#!/usr/bin/env python) +#.*|#!/usr/bin/python2|' docs/src/filters/doc-filter-python.py + grep -e 'This file was automatically generated by SWIG' -r . -l + xargs rm + mkdir build-docs ++ /bin/ls -1 ++ grep -v build-docs + cp -a AUTHORS.txt CMakeLists.txt COPYING.html COPYING.txt FUNDING.txt LICENSE.html LICENSE.txt Makefile.in NEWS.txt OLD_NEWS.txt README-extension.txt README.txt VERSION.txt VERSION_PACKAGES.ac acinclude.m4 aclocal.m4 cmake_uninstall.cmake.in common.cmake comp-package.cmake config configure configure.ac docs examples fbc-package.cmake groups-package.cmake layout-package.cmake libsbml.spec.in macosx multi-package.cmake qual-package.cmake render-package.cmake src build-docs/ + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.pCJHXb + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.17.0-Source + mkdir -p build2 build + pushd build2 ~/build/BUILD/libSBML-5.17.0-Source/build2 ~/build/BUILD/libSBML-5.17.0-Source + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS ~/build/BUILD/libSBML-5.17.0-Source/build ~/build/BUILD/libSBML-5.17.0-Source/build2 ~/build/BUILD/libSBML-5.17.0-Source + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + pushd ../build + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DENABLE_LAYOUT=ON -DENABLE_QUAL=ON -DENABLE_COMP=ON -DENABLE_FBC=ON -DENABLE_RENDER=ON -DENABLE_GROUPS=ON -DENABLE_MULTI=ON -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_PYTHON:BOOL=ON -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.7m -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.7m.so -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DWITH_PERL:BOOL=ON -DPERL_EXECUTABLE:FILEPATH=/usr/bin/perl -DPERL_INCLUDE_PATH:PATH=/usr/lib64/perl5/CORE -DPERL_LIBRARY:FILEPATH=/usr/lib64/libperl.so -DWITH_RUBY:BOOL=ON -DRUBY_SITEARCH_DIR:PATH=/usr/local/lib64/ruby/site_ruby -DRUBY_SITELIB_DIR:PATH=/usr/local/share/ruby/site_ruby -DRUBY_VENDORARCH_DIR:PATH=/usr/lib64/ruby/vendor_ruby -DRUBY_VENDORLIB_DIR:PATH=/usr/share/ruby/vendor_ruby -DRUBY_HAS_VENDOR_RUBY:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DWITH_CSHARP:BOOL=ON -DWITH_XERCES:BOOL=OFF -DWITH_LIBXML:BOOL=ON -DWITH_EXPAT:BOOL=OFF -DWITH_SWIG:BOOL=ON -DWITH_CHECK=ON -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -DWITH_MATLAB:BOOL=OFF -Wno-dev -DEXIT_ON_ERROR:BOOL=ON .. -- The C compiler identification is GNU 8.2.1 -- The CXX compiler identification is GNU 8.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so - found -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found PythonInterp: /usr/bin/python3 (found version "3.7.1") -- Found Perl: /usr/bin/perl (found version "5.28.0") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.28.0") -- Found PythonLibs: /usr/lib64/libpython3.7m.so (found version "3.7.1") -- Found Ruby: /usr/bin/ruby (found version "2.5.3") -- ---------------------------------------------------------------------- libSBML version 5.17.0 ---------------------------------------------------------------------- More information and the latest version are available online at http://sbml.org/Software/libSBML Please report problems using the issue tracker at http://sbml.org/Software/libsbml/issue-tracker To contact the developers directly, email libsbml-team@googlegroups.com Configured on host 'bdd23dafe2f64b25a758830c7f0761d7' host type = Linux host operating system = Linux 4.16.13-300.fc28.ppc64le host CPU architecture = ppc64le General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX CFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LIBS for XML = /usr/lib64/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig (Version 3.0.12) -- Using C# = /usr/bin/mcs -- Using Python = /usr/bin/python3 -- Using Perl = /usr/bin/perl -- Using Ruby = /usr/bin/ruby -- Using R = /usr/bin/R -- Using libcheck = /usr/lib64/libcheck.so -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- Use Legacy Math = no -- -- Support for SBML Level 3 Packages: -- SBML 'comp' package = ON -- SBML 'fbc' package = ON -- SBML 'groups' package = ON -- SBML 'layout' package = ON -- SBML 'multi' package = ON -- SBML 'qual' package = ON -- SBML 'render' package = ON -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_SKIP_INSTALL_RPATH INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSBML-5.17.0-Source/build + /usr/bin/make -O -j2 /usr/bin/cmake -H/builddir/build/BUILD/libSBML-5.17.0-Source -B/builddir/build/BUILD/libSBML-5.17.0-Source/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/CMakeFiles/sbml.dir/DependInfo.cmake --color= Scanning dependencies of target sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/CMakeFiles/sbml-static.dir/DependInfo.cmake --color= Scanning dependencies of target sbml-static make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:309:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:450:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:309:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:450:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:66, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:396:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:537:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:66, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:396:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:537:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:32: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:164:7: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:367:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:441:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:32: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:164:7: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:367:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:441:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Deletion.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:158:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:158:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:114:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:114:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedBy.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:658:7: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:669:7: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:658:7: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:669:7: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:39: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:493:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:39: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:493:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLUri.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:31: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:281:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, m.getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:31: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:281:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, m.getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:31: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:320:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, m.getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:31: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:320:3: note: in expansion of macro 'COMP_CREATE_NS' COMP_CREATE_NS(compns, m.getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common 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src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:141, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:193:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:829:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1274:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1481:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:141, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:193:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:829:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1274:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1481:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:144:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:442:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:144:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:442:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Association.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Association.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:296:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:333:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:296:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:333:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:101, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:939:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:976:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1013:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1109:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1117:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1125:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1133:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:101, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:939:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:976:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1013:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1109:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1117:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1125:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1133:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:308:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:345:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:382:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:308:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:345:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:382:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:122, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1174:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:122, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1174:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:89, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1096:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1192:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:89, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1096:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1192:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:346:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:695:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:346:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:695:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:85, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1190:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:85, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1190:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:92, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:208:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:223:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:238:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:923:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:92, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:208:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:223:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:238:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:923:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.h:130, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:468:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1489:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.h:130, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:37: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:468:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1489:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:48, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:229:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:48, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:229:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.h:160, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:461:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.h:160, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:461:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:68, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:243:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:303:3: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:68, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:243:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:303:3: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:96, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:343:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:454:3: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:96, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:343:5: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:454:3: note: in expansion of macro 'GROUPS_CREATE_NS' GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Member.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Member.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:53, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:476:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:53, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:476:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:357:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:372:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:640:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:357:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:372:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:640:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:32: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:647:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1174:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:32: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:647:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1174:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:48, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:36, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1198:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:48, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:60, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:36, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1198:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1378:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1394:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1410:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1425:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1441:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1458:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2039:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2211:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2363:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2512:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2661:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:36: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1378:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1394:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1410:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1425:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1441:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1458:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2039:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2211:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2363:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2512:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2661:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:32: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:494:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:966:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:32: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:494:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:966:5: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI 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/usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:135:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:580:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:135:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:580:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:46, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:131:8: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:46, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:131:8: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:49, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:127:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:320:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:347:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:403:4: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:49, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:127:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:320:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:347:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:403:4: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:124:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:124:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:53, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:132:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:479:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:632:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:734:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:53, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:132:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:479:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:632:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:734:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:123:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:294:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:123:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:294:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:738:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:738:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:71, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:71, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:77, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:449:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:606:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:763:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:920:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1177:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1623:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:77, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:449:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:606:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:763:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:920:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1177:7: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1623:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:138, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:138, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:738:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:738:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:79, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:544:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:757:3: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1377:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1384:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:79, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:544:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:757:3: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1377:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1384:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:72, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:427:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:618:3: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:999:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:72, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:427:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:618:3: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:999:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:586:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:586:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:70, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:860:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:70, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:860:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:70, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:929:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:70, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:929:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:74, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:854:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:74, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:854:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:113, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:270:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:482:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:113, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:30: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:270:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:482:5: note: in expansion of macro 'MULTI_CREATE_NS' MULTI_CREATE_NS(multins, getSBMLNamespaces()); ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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/builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common 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src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:830:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1012:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:54, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:830:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1012:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:68, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1063:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1120:3: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:68, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1063:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1120:3: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.h:98, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1333:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.h:98, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1333:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.h:89, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1236:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.h:89, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1236:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:80, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1329:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:80, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1329:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.h:82, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:451:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:635:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:793:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1762:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.h:82, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:451:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:635:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:793:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1762:5: note: in expansion of macro 'QUAL_CREATE_NS' QUAL_CREATE_NS(qualns, getSBMLNamespaces()); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:28: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:441:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:28: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:441:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:28: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:704:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:28: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:704:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:50: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h: In copy constructor 'ColorDefinition::ColorDefinition(const ColorDefinition&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:95:15: warning: 'ColorDefinition::mValue' will be initialized after [-Wreorder] std::string mValue; ^~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:90:17: warning: 'unsigned char ColorDefinition::mRed' [-Wreorder] unsigned char mRed; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:272:1: warning: when initialized here [-Wreorder] ColorDefinition::ColorDefinition(const ColorDefinition& orig) ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:50: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h: In copy constructor 'ColorDefinition::ColorDefinition(const ColorDefinition&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:95:15: warning: 'ColorDefinition::mValue' will be initialized after [-Wreorder] std::string mValue; ^~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:90:17: warning: 'unsigned char ColorDefinition::mRed' [-Wreorder] unsigned char mRed; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:272:1: warning: when initialized here [-Wreorder] ColorDefinition::ColorDefinition(const ColorDefinition& orig) ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:360:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'virtual void GlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:837:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:360:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'virtual void GlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:837:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp: In member function 'virtual void GlobalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp:218:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp: In member function 'virtual void GlobalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp:218:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:93, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:561:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'virtual SBase* GradientBase::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:1251:22: warning: unused variable 'name' [-Wunused-variable] const std::string& name = stream.peek().getName(); ^~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:93, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:561:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'virtual SBase* GradientBase::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:1251:22: warning: unused variable 'name' [-Wunused-variable] const std::string& name = stream.peek().getName(); ^~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'virtual void GraphicalPrimitive1D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1158:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (log && log->getNumErrors() == numErrs + 1 && ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'virtual void GraphicalPrimitive1D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1158:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (log && log->getNumErrors() == numErrs + 1 && ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h: In constructor 'GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces*, const string&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:92:7: warning: 'GraphicalPrimitive2D::mFillRule' will be initialized after [-Wreorder] int mFillRule; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:91:15: warning: 'std::__cxx11::string GraphicalPrimitive2D::mFill' [-Wreorder] std::string mFill; ^~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:135:1: warning: when initialized here [-Wreorder] GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces* renderns, const std::string& id) ^~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h: In constructor 'GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces*, const string&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:92:7: warning: 'GraphicalPrimitive2D::mFillRule' will be initialized after [-Wreorder] int mFillRule; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:91:15: warning: 'std::__cxx11::string GraphicalPrimitive2D::mFill' [-Wreorder] std::string mFill; ^~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:135:1: warning: when initialized here [-Wreorder] GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces* renderns, const std::string& id) ^~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Image.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Image.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h: In constructor 'LineEnding::LineEnding(const XMLNode&, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:88:16: warning: 'LineEnding::mBoundingBox' will be initialized after [-Wreorder] BoundingBox* mBoundingBox; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:87:16: warning: 'RenderGroup* LineEnding::mGroup' [-Wreorder] RenderGroup* mGroup; ^~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:107:1: warning: when initialized here [-Wreorder] LineEnding::LineEnding(const XMLNode& node, unsigned int l2version) ^~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:68, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:524:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:550:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1304:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1306:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1478:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (log && log->getNumErrors() == numErrs + 1 && ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h: In constructor 'LineEnding::LineEnding(const XMLNode&, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:88:16: warning: 'LineEnding::mBoundingBox' will be initialized after [-Wreorder] BoundingBox* mBoundingBox; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:87:16: warning: 'RenderGroup* LineEnding::mGroup' [-Wreorder] RenderGroup* mGroup; ^~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:107:1: warning: when initialized here [-Wreorder] LineEnding::LineEnding(const XMLNode& node, unsigned int l2version) ^~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:68, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:524:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:550:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1304:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1306:3: note: in expansion of macro 'LAYOUT_CREATE_NS' LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1478:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (log && log->getNumErrors() == numErrs + 1 && ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:366:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:366:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:319:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:406:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:319:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:406:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:66, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:256:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:284:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:312:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:340:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:368:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:396:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:424:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' .17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:452:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:512:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:66, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:256:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:284:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:312:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:340:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:368:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:396:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:424:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:452:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:512:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:420:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:600:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:835:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:892:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:420:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:600:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:835:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:892:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:278:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:343:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:278:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:343:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:305:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:394:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:61, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:305:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:394:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:75, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:75, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:581:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:785:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:842:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:63, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:581:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:785:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:842:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:33: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:358:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'virtual void LocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:830:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:358:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'virtual void LocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:830:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp: In member function 'virtual void LocalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp:321:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp: In member function 'virtual void LocalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp:321:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:115:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:416:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:444:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'virtual void Polygon::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:829:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:115:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:416:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:444:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'virtual void Polygon::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:829:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RelAbsVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RelAbsVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:40, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:468:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:496:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:40, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:468:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:496:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(unsigned int, unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] std::string mEndHead; ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] std::string mFontFamily; ^~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(unsigned int level, ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(unsigned int level, ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(RenderPkgNamespaces*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] std::string mEndHead; ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] std::string mFontFamily; ^~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In copy constructor 'RenderGroup::RenderGroup(const RenderGroup&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] std::string mEndHead; ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] std::string mFontFamily; ^~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(const RenderGroup& orig) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(const RenderGroup& orig) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:67, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1109:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1137:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddmake[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' ir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1165:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1193:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1221:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1249:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1277:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1305:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2622:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(unsigned int, unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] std::string mEndHead; ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] std::string mFontFamily; ^~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(unsigned int level, ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(unsigned int level, ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(RenderPkgNamespaces*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] std::string mEndHead; ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] std::string mFontFamily; ^~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In copy constructor 'RenderGroup::RenderGroup(const RenderGroup&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] std::string mEndHead; ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] std::string mFontFamily; ^~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(const RenderGroup& orig) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] RenderGroup::RenderGroup(const RenderGroup& orig) ^~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:67, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1109:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1137:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddmake[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' ir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1165:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1193:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1221:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1249:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1277:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1305:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2622:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:729:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:891:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:919:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1081:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:729:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:891:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:919:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1081:5: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:588:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:1260:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.h:64, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:588:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] catch (SBMLExtensionException e)\ ^ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:1260:3: note: in expansion of macro 'RENDER_CREATE_NS' RENDER_CREATE_NS(renderns, getSBMLNamespaces()); ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h: In copy constructor 'Text::Text(const Text&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:116:7: warning: 'Text::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:112:16: warning: 'RelAbsVector Text::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:198:1: warning: when initialized here [-Wreorder] Text::Text(const Text& orig) ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:34: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h: In copy constructor 'Text::Text(const Text&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:116:7: warning: 'Text::mVTextAnchor' will be initialized after [-Wreorder] int mVTextAnchor; ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:112:16: warning: 'RelAbsVector Text::mFontSize' [-Wreorder] RelAbsVector mFontSize; ^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:198:1: warning: when initialized here [-Wreorder] Text::Text(const Text& orig) ^~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:500:1: warning: "/*" within comment [-Wcomment] /* /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp: In member function 'virtual void Transformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:798:16: warning: unused variable 'pkgVersion' [-Wunused-variable] unsigned int pkgVersion = getPackageVersion(); ^~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:500:1: warning: "/*" within comment [-Wcomment] /* /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp: In member function 'virtual void Transformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:798:16: warning: unused variable 'pkgVersion' [-Wunused-variable] unsigned int pkgVersion = getPackageVersion(); ^~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp: In member function 'virtual void Transformation2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp:714:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp: In member function 'virtual void Transformation2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp:714:8: warning: unused variable 'assigned' [-Wunused-variable] bool assigned = false; ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 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src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/CVTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/CVTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator 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CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp: In member function 'void Date::parseDateNumbersToString()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u-%u-", mYear, mMonth); ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: note: directive argument in the range [10, 4294967295] In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 23 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:465:25: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%uT", mDay); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:471:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u:", mHour); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:477:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u:", mMinute); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:483:25: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] snprintf(cdate, 10, "%u", mSecond); ^~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:502:27: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u:", mHoursOffset); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:508:27: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] snprintf(cdate, 10, "%u", mMinutesOffset); ^~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp: In member function 'void Date::parseDateNumbersToString()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u-%u-", mYear, mMonth); ^~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: note: directive argument in the range [10, 4294967295] In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 23 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:465:25: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%uT", mDay); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:471:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u:", mHour); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:477:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u:", mMinute); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:483:25: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] snprintf(cdate, 10, "%u", mSecond); ^~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:502:27: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] snprintf(cdate, 10, "%u:", mHoursOffset); ^~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/smake[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' rc/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:508:27: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] snprintf(cdate, 10, "%u", mMinutesOffset); ^~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionOption.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionOption.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionProperties.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT 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src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLReactionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLStripPackageConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLUnitsConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common 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/builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:350:56: warning: suggest parentheses around assignment used as truth value [-Wparentheses] return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; ^~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:350:56: warning: suggest parentheses around assignment used as truth value [-Wparentheses] return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; ^~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:401:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:417:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:401:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:417:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:525:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:541:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:525:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:541:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2101:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2117:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2101:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2117:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:876:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:892:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:876:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:892:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1136:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1152:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1136:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1152:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:884:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:900:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:884:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:900:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1289:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1305:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1289:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1305:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ExpectedAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ExpectedAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1361:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1377:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1361:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1377:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1271:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1287:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1271:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1287:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2063:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2079:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2063:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2079:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:828:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:844:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:828:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:844:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7422:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7422:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:431:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:447:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:431:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:447:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:1990:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:2006:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:1990:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:2006:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:732:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:748:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:732:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:748:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:523:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:539:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:523:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:539:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2675:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2691:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2675:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2691:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1908:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1924:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1940:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1956:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1972:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1988:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1908:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1924:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1940:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1956:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1972:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1988:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConvert.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConvert.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2252:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2268:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2284:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2252:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2268:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2284:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBO.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBO.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp:5895:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] unsigned int pkgCoreVersion = getPackageCoreVersion(); ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp:5895:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] unsigned int pkgCoreVersion = getPackageCoreVersion(); ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SimpleSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SimpleSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2657:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2673:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2657:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2673:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1969:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1985:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2001:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1969:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1985:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2001:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:874:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:890:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:874:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:890:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:638:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:654:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:638:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:654:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SyntaxChecker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SyntaxChecker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2420:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2436:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building C object src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator 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CMakeFiles/sbml.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitKind.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2420:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2436:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] catch (SBMLConstructorException) ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 46%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitKind.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/ElementFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdList.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdentifierTransformer.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/List.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/List.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdentifierTransformer.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/List.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/MetaIdFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/MetaIdFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/PrefixTransformer.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building C object src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/Stack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/Stack.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building C object src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/StringBuffer.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building C object src/CMakeFiles/sbml.dir/sbml/util/memory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/PrefixTransformer.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 47%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/Stack.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 48%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/StringBuffer.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 48%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/InternalConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML 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-DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v1CompatibilityValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/MathMLConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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/builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBOConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBOConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/StrictUnitConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/StrictUnitConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/VConstraint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/UnitConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/VConstraint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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[ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementNot0DComp.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT 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&& /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdNameNewOnSBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawVars.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML 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directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericArgsMathCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumberArgsMathCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PowerUnitsCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI 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/builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints 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[ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueMetaId.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ValidCnUnitsValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnExponentialNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnIntegerNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3FormulaFormatter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaTokenizer.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/OutputCompressor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/MathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/CompressCommon.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/bzfstream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/InputDecompressor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/zip.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/OutputCompressor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/unzip.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/unzip.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/unzip.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/bzfstream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/ioapi.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 66%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/ioapi_mem.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 65%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zip.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zfstream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/unzip.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/ioapi.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zipfstream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/ioapi_mem.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zfstream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'void XMLOutputStream::writeComment(const string&, const string&, bool)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: warning: '%02d' directive writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-overflow=] sprintf(formattedDateAndTime, "%d-%02d-%02d %02d:%02d", ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: note: directive argument in the range [-2147483647, 2147483647] In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /usr/include/c++/8/bits/locale_classes.h:40, from /usr/include/c++/8/bits/ios_base.h:41, from /usr/include/c++/8/ios:42, from /usr/include/c++/8/ostream:38, from /usr/include/c++/8/iostream:39, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:35: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 14 and 60 bytes into a destination of size 17 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLParser.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'void XMLOutputStream::writeComment(const string&, const string&, bool)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: warning: '%02d' directive writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-overflow=] sprintf(formattedDateAndTime, "%d-%02d-%02d %02d:%02d", ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: note: directive argument in the range [-2147483647, 2147483647] In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6391, from /usr/include/c++/8/string:52, from /usr/include/c++/8/bits/locale_classes.h:40, from /usr/include/c++/8/bits/ios_base.h:41, from /usr/include/c++/8/ios:42, from /usr/include/c++/8/ostream:38, from /usr/include/c++/8/iostream:39, from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:35: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 14 and 60 bytes into a destination of size 17 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLParser.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -lbz2 -lz -lxml2 cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cmake -E cmake_symlink_library libsbml.so.5.17.0 libsbml.so.5 libsbml.so make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Built target sbml make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Swig Perl bindings source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig/swigdoc.py --language perl --top /builddir/build/BUILD/libSBML-5.17.0-Source --master /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/LibSBML.pod --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -perl5 -proxy -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/LibSBML_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/LibSBML.i make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.h:127: Warning 509: Overloaded method ASTBase::setType(int) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.h:125: Warning 509: as it is shadowed by ASTBase::setType(ASTNodeType_t). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:327: Warning 509: Overloaded method GraphicalPrimitive2D::setFillRule(FillRule_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:311: Warning 509: as it is shadowed by GraphicalPrimitive2D::setFillRule(GraphicalPrimitive2D::FILL_RULE). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:378: Warning 509: Overloaded method GradientBase::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:362: Warning 509: as it is shadowed by GradientBase::setSpreadMethod(GradientBase::SPREADMETHOD). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:440: Warning 509: Overloaded method Text::setFontWeight(Text::FONT_WEIGHT) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:436: Warning 509: as it is shadowed by Text::setFontWeight(FontWeight_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:478: Warning 509: Overloaded method Text::setFontStyle(Text::FONT_STYLE) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:473: Warning 509: as it is shadowed by Text::setFontStyle(FontStyle_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:514: Warning 509: Overloaded method Text::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:509: Warning 509: as it is shadowed by Text::setTextAnchor(HTextAnchor_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:551: Warning 509: Overloaded method Text::setVTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:546: Warning 509: as it is shadowed by Text::setVTextAnchor(VTextAnchor_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:528: Warning 509: Overloaded method RenderGroup::setFontWeight(Text::FONT_WEIGHT) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:524: Warning 509: as it is shadowed by RenderGroup::setFontWeight(FontWeight_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:566: Warning 509: Overloaded method RenderGroup::setFontStyle(Text::FONT_STYLE) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:561: Warning 509: as it is shadowed by RenderGroup::setFontStyle(FontStyle_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:603: Warning 509: Overloaded method RenderGroup::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:598: Warning 509: as it is shadowed by RenderGroup::setTextAnchor(HTextAnchor_t const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:675: Warning 509: Overloaded method RenderGroup::setVTextAnchor(VTextAnchor_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:635: Warning 509: as it is shadowed by RenderGroup::setVTextAnchor(Text::TEXT_ANCHOR). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:678: Warning 509: Overloaded method RenderGroup::setVtextAnchor(VTextAnchor_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:639: Warning 509: as it is shadowed by RenderGroup::setVtextAnchor(Text::TEXT_ANCHOR). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:906: Warning 509: Overloaded method DefaultValues::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:891: Warning 509: as it is shadowed by DefaultValues::setSpreadMethod(GradientBase::SPREADMETHOD const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1138: Warning 509: Overloaded method DefaultValues::setFillRule(FillRule_t) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1122: Warning 509: as it is shadowed by DefaultValues::setFillRule(GraphicalPrimitive2D::FILL_RULE const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1258: Warning 509: Overloaded method DefaultValues::setFontWeight(FontWeight_t) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1242: Warning 509: as it is shadowed by DefaultValues::setFontWeight(Text::FONT_WEIGHT const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1306: Warning 509: Overloaded method DefaultValues::setFontStyle(FontStyle_t) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1290: Warning 509: as it is shadowed by DefaultValues::setFontStyle(Text::FONT_STYLE const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1354: Warning 509: Overloaded method DefaultValues::setTextAnchor(HTextAnchor_t) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1338: Warning 509: as it is shadowed by DefaultValues::setTextAnchor(Text::TEXT_ANCHOR const). /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1402: Warning 509: Overloaded method DefaultValues::setVTextAnchor(VTextAnchor_t) effectively ignored, /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1386: Warning 509: as it is shadowed by DefaultValues::setVTextAnchor(Text::TEXT_ANCHOR const). make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target binding_perl_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Swig Ruby source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -ruby -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/libsbml.i /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:98: Warning 801: Wrong class name (corrected to `Double_array') /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:98: Warning 801: Wrong class name (corrected to `Double_array') /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:99: Warning 801: Wrong class name (corrected to `Int_array') /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:99: Warning 801: Wrong class name (corrected to `Int_array') make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target binding_ruby_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Swig: R Bindings cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build" -DCUR_SRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source" -DCMAKE_COMMAND="/usr/bin/cmake" -DPYTHON_EXECUTABLE="/usr/bin/python3" -DSWIG_SWIGDOCDEFINES="" -DSWIG_ARGS="-DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER" -DSWIG_EXECUTABLE="/usr/bin/swig" -DLIBSBML_REMOVE_WRAPPERS=OFF -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/swig-binding.cmake cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML.R" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/patch-swig-file.cmake -- Patched libSBML.R cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/patch-swig-file.cmake -- Patched libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a R keyword, renaming to '_next' make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target binding_r_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_extensions make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestCheckConsistency.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestExtensionObjects.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Linking CXX executable test_comp_extensions cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_extensions.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -o test_comp_extensions ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target test_comp_extensions make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_sbase make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReadWriteSBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseObjects.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestPort.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Linking CXX executable test_comp_sbase cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_sbase.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestPort.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -o test_comp_sbase ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Built target test_comp_sbase make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverterStripPackage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningErrorMessages.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningNewFlags.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningUnknownPackageRefs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestExternalModelResolving.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestURIResolvers.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Linking CXX executable test_comp_util cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_util.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o CMakeFiles/test_comp_util.dir/TestRunner.c.o -o test_comp_util ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Built target test_comp_util make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestCompConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Linking CXX executable test_comp_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -o test_comp_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Built target test_comp_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_fbc make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestReadFbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Linking CXX executable test_sbml_package_fbc cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_fbc.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -o test_sbml_package_fbc ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Built target test_sbml_package_fbc make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_fbc_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestFbcConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Linking CXX executable test_fbc_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fbc_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -o test_fbc_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Built target test_fbc_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake --color= Scanning dependencies of target test_extension_package_groups make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestGroupsModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestReadGroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Linking CXX executable test_extension_package_groups cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_groups.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -o test_extension_package_groups ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Built target test_extension_package_groups make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_groups_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 76%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestGroupsConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 76%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 76%] Linking CXX executable test_groups_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_groups_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_groups_validator.dir/TestFile.cpp.o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -o test_groups_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 76%] Built target test_groups_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_layout make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Swig Python source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/swigdoc.py --language python --top /builddir/build/BUILD/libSBML-5.17.0-Source --master /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/pydoc-doxygen.i --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/generate-class-name-list.py /builddir/build/BUILD/libSBML-5.17.0-Source/src > /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/class-list.txt cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/generate-converters-list.py /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/class-list.txt > /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml-converters.txt cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/doc-converter/rewrite_pydoc.py -f /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/pydoc-doxygen.i -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/pydoc-normal.i -i /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../../../docs/src/common-text -g /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../../../docs/src/common-graphics cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc-doxygen.i pydoc.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -DGENERATING_DOCS -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/libsbml.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-doxygen.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename libsbml.py libsbml-doxygen.py cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc-normal.i pydoc.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/libsbml.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-normal.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python" -DVERSION="5.17.0" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/add_version.cmake cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/patch-python.cmake -- Patching Python wrapper make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/doc-converter/rewrite_pydoc.py:121: DeprecationWarning: the formatter module is deprecated from formatter import NullWriter, AbstractFormatter /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' Python: Add Version to generated file make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target binding_python_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_layout_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestLayoutConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Linking CXX executable test_layout_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_layout_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_layout_validator.dir/TestFile.cpp.o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -o test_layout_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target test_layout_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_multi make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestCheckConsistency.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestMultiAST.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Linking CXX executable test_sbml_package_multi cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_multi.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -o test_sbml_package_multi ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_sbml_package_multi make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_multi_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestMultiConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Linking CXX executable test_multi_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_multi_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_multi_validator.dir/TestFile.cpp.o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -o test_multi_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_multi_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/DependInfo.cmake --color= Scanning dependencies of target test_extension_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestGetAllElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension 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CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestReadQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o cd 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Linking CXX executable test_extension_package_qual cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -o test_extension_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Built target test_extension_package_qual make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/utility.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Linking CXX executable test_sbml_package_layout cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_layout.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -o test_sbml_package_layout ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Built target test_sbml_package_layout make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_qual_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestQualConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Linking CXX executable test_sbml_package_qual cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -o test_sbml_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Built target test_sbml_package_qual make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_render make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Linking CXX executable test_qual_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_qual_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_qual_validator.dir/TestFile.cpp.o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -o test_qual_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Built target test_qual_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_render_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestRenderConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Linking CXX executable test_render_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_render_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_render_validator.dir/TestFile.cpp.o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -o test_render_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Built target test_render_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_annotation make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestL3ModelHistory.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationMetaid.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationNestedCVTerms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestSyncAnnotation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestValidation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCVTerms.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCVTerms_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestDate_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelCreator_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelHistory.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelHistory_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Linking CXX executable test_sbml_annotation cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_annotation.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -o test_sbml_annotation ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Built target test_sbml_annotation make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_conversion make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestConversionOption.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestConversionProperties.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestInferUnitsConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestRateOfConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestSBMLConverterRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestSBMLRuleConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestStripPackageConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverter2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverterL2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Linking CXX executable test_sbml_conversion cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_conversion.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -o test_sbml_conversion ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Built target test_sbml_conversion make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_extension make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestPackage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building C object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtensionNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtensionRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBaseExtensionPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePluginCreator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePluginCreatorBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestUnknownPackage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Linking CXX executable test_sbml_extension cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_extension.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -o test_sbml_extension ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Built target test_sbml_extension make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_math make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestChildFunctions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaParser.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewASTNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewReadMathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewWriteMathMLFromAST.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadFromFile1.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadFromFile2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:35: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1529:13: warning: 'void test_element_implies(int)' defined but not used [-Wunused-function] START_TEST (test_element_implies) ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1510:13: warning: 'void test_element_rem(int)' defined but not used [-Wunused-function] START_TEST (test_element_rem) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1491:13: warning: 'void test_element_quotient(int)' defined but not used [-Wunused-function] START_TEST (test_element_quotient) ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1472:13: warning: 'void test_element_min(int)' defined but not used [-Wunused-function] START_TEST (test_element_min) ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1453:13: warning: 'void test_element_max(int)' defined but not used [-Wunused-function] START_TEST (test_element_max) ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestValidASTNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestWriteMathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestWriteMathMLFromAST.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestASTNode.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaFormatter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaParser.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaTokenizer.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaFormatter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Linking CXX executable test_sbml_math cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_math.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT 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-fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common 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-fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator 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CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension 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CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension 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CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderReading.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAncestor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:40: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:1344:13: warning: 'void test_Attributes_Trigger_Id(int)' defined but not used [-Wunused-function] START_TEST (test_Attributes_Trigger_Id) ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConsistencyChecks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:76: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp: In function 'void test_RenderWriting_write_L3_model_1(int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:3159:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without START_TEST (test_RenderWriting_write_L3_model_1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp: In function 'void test_RenderWriting_write_model_1(int)': /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:137:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without START_TEST (test_RenderWriting_write_model_1) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestGetMultipleObjects.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common 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test_sbml_package_render cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_render.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -o test_sbml_package_render ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Built target test_sbml_package_render make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestLevelCompatibility.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_units make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension 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CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile6.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestCalculatedUnitDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile7.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile8.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions_undefined.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile9.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestFormulaUnitsData.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestFormulaUnitsData_map.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter1.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 90%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common 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'/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUtilsUnitDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRemoveFromParent.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRenameIDs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Linking CXX executable test_sbml_units cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_units.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -o test_sbml_units ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Built target test_sbml_units make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRequiredAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestList.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestList.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestMemory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestMemory.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRequiredElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestStack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestStack.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestStringBuffer.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestUtil.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Linking CXX executable test_sbml_util cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_util.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_util.dir/TestList.c.o CMakeFiles/test_sbml_util.dir/TestMemory.c.o CMakeFiles/test_sbml_util.dir/TestRunner.c.o CMakeFiles/test_sbml_util.dir/TestStack.c.o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -o test_sbml_util ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Built target test_sbml_util make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvertFromL3V2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvertStrict.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Linking CXX executable test_sbml_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -o test_sbml_validator ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Built target test_sbml_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_xml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLParentObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp:41: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp:787:12: warning: 'void test_SBMLTransforms_replaceIAWithFD(int)' defined but not used [-Wunused-function] START_TEST(test_SBMLTransforms_replaceIAWithFD) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLExceptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLValidators.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLAttributesC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLErrorC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBaseIdName.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLErrorLog.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLInputStream.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension 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directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNode_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBase_newSetters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLOutputStream.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteL3SBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLToken.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteL3V2SBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLToken_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLTriple.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteSBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAlgebraicRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Linking CXX executable test_sbml_xml cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_xml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -o test_sbml_xml ../../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Built target test_sbml_xml make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAssignmentRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentType.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentType_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentVolumeRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartment_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConstraint.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConstraint_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestDelay.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEvent.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEventAssignment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints 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/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEventAssignment_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEvent_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestFunctionDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInitialAssignment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestKineticLaw.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestKineticLaw_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Compartment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Event.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3KineticLaw.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3LocalParameter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Model.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Swig C# source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build" -DCUR_SRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source" -DCMAKE_COMMAND="/usr/bin/cmake" -DPYTHON_EXECUTABLE="/usr/bin/python3" -DSWIG_SWIGDOCDEFINES="--define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER" -DSWIG_ARGS="-DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER" -DSWIG_EXECUTABLE="/usr/bin/swig" -DWITH_DOXYGEN="OFF" -DLIB_NAME="libsbmlcs" -P /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/swig-binding.cmake Swig: C# Bindings Creating /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/csharp-files make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Parameter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_csharp_native_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Reaction.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Species.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3SpeciesReference.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Trigger.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Unit.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestListOf.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModel.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModel_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModifierSpeciesReference.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameterRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameter_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestPriority.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRateRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReaction.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReaction_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile1.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile2.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile3.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile4.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRule_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvert.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLDocument.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpecies.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesReference.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesType.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesType_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpecies_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestStoichiometryMath.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common 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-fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSyntaxChecker.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestTrigger.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnit.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitKind.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension 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-m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnit_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Building CXX object src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_csharp_native_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp/../swig -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_csharp_native_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Linking CXX executable test_sbml_sbml cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_sbml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o 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CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -o test_sbml_sbml ../../libsbml-static.a -lcheck -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target test_sbml_sbml make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp 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-fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libsbmlcs.so -o libsbmlcs.so CMakeFiles/binding_csharp_native_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_csharp_native_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Build csharp files cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp && /usr/bin/cmake -DCSHARP_EXTRA_ARGS="" -DCSHARP_COMPILER="/usr/bin/mcs" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp/compile-native-files.cmake Creating: libsbmlcsP.dll Creating: TestRunner.exe Creating: TestRW.exe make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_csharp_managed_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source 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-I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/usr/include/python3.7m -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Linking CXX shared library _libsbml.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,_libsbml.so -o _libsbml.so CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lpython3.7m -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__slice(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5001:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__delete_at(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5047:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch (std::out_of_range) ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__at(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5057:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_0(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5079:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_1(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5088:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] catch( std::out_of_range ) { ^~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLConverter* SwigDirector_SBMLConverter::clone() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5656:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("clone"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLDocument* SwigDirector_SBMLConverter::getDocument()': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5674:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual const SBMLDocument* SwigDirector_SBMLConverter::getDocument() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5692:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual ConversionProperties SwigDirector_SBMLConverter::getDefaultProperties() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5709:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getDefaultProperties"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLNamespaces* SwigDirector_SBMLConverter::getTargetNamespaces()': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5726:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getTargetNamespaces"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual ConversionProperties* SwigDirector_SBMLConverter::getProperties() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5800:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getProperties"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual int SwigDirector_SBMLConverter::convert()': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5815:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("convert"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLValidator* SwigDirector_SBMLValidator::clone() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5848:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("clone"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLDocument* SwigDirector_SBMLValidator::getDocument()': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5866:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual const SBMLDocument* SwigDirector_SBMLValidator::getDocument() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5884:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual unsigned int SwigDirector_SBMLValidator::validate()': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5916:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("validate"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual void SwigDirector_SBMLValidator::clearFailures()': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5930:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("clearFailures"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLResolver* SwigDirector_SBMLResolver::clone() const': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5956:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] result = rb_funcall(swig_get_self(), rb_intern("clone"), 0, NULL); ^~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = long int]': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4999:127: required from here /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5122:131: required from here /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLErrorLog_add(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:102522:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesRequiredSBMLNamespacesForAddition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:21842:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesSBMLNamespaces(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) ^ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:21729:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTBase_setType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:116735:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Iterator___sub__(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:3415:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] res = SWIG_AsVal_long (obj, val ? &v : 0); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:8310:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ConstIterator___sub__(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:3415:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] res = SWIG_AsVal_long (obj, val ? &v : 0); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:7727:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ReactionGlyph_getSpeciesReferenceGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:197886:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_getReferenceGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:195286:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReplacedElements_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:140878:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBasePlugin_getReplacedElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:128235:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getNestedCVTerm(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107938:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBMLErrorLog_getNumFailsWithSeverity(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:103172:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfConstraints_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:59446:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_UnitDefinition_getUnit(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:43310:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfUnits_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:41691:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getConstraint(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30022:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Compartment_setSpatialDimensions(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:47630:36: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_double(argv[1], NULL); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Unit_setExponent(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:40867:36: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_double(argv[1], NULL); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getDisabledPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:20865:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_getSubGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:195405:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Curve_getCurveSegment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:190458:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLineSegments_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:189757:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOf_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:22875:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getResourceURI(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107322:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalStyles_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:324200:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalStyles_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:324020:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalRenderInformation_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:323115:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalRenderInformation_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:322935:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLineEndings_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:321587:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLineEndings_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:321407:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientStops_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:320565:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientStops_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:320385:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalStyles_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:318485:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalStyles_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:318305:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalRenderInformation_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:317336:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalRenderInformation_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:317156:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDrawables_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:315664:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDrawables_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:315484:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfColorDefinitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:313690:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfColorDefinitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:313510:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setVTextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311874:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setTextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311706:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setFontStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311538:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setFontWeight(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311370:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setFillRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311022:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setSpreadMethod(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:310360:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_removeStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:304126:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_removeLocalStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:304038:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_getStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:303651:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_getLocalStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:303533:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_removeElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:298097:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_getElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:297637:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setVtextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:297092:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setVTextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296995:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setTextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296756:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setFontStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296588:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setFontWeight(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296420:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setVTextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:283146:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setTextAnchor(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:282981:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setFontStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:282816:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setFontWeight(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:282651:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GlobalRenderInformation_removeGlobalStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:277296:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GlobalRenderInformation_getStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:276941:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GlobalRenderInformation_getGlobalStyle(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:276823:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GradientBase_removeGradientStop(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:268754:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GradientBase_getGradientStop(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:268508:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GradientBase_setSpreadMethod(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:268181:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_removeLineEnding(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:267439:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_getLineEnding(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:267179:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_removeColorDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266387:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_getColorDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266127:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GraphicalPrimitive2D_setFillRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_long (obj, &v); ~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:264401:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderLayoutPlugin_removeLocalRenderInformation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:261009:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderLayoutPlugin_getRenderInformation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:260776:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderListOfLayoutsPlugin_removeGlobalRenderInformation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:260209:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderListOfLayoutsPlugin_getRenderInformation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:259976:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTransitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:257471:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTransitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:257291:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_removeFunctionTerm(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:256333:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getFunctionTerm(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:256073:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_removeOutput(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255825:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getOutputBySpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255625:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getOutput(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255440:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_removeInput(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255192:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getInputBySpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:254992:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getInput(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:254807:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfQualitativeSpecies_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:253809:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfQualitativeSpecies_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:253629:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutputs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:251861:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutputs_getBySpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:251741:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutputs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:251556:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInputs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:249892:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInputs_getBySpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:249772:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInputs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:249587:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionTerms_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:247033:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionTerms_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:246853:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_removeTransition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:245281:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_getTransition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:245045:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_removeQualitativeSpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:244773:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_getQualitativeSpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:244537:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeInSpeciesTypeBond(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:240076:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getInSpeciesTypeBond(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239816:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeSpeciesTypeComponentIndex(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239568:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getSpeciesTypeComponentIndex(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239308:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeSpeciesTypeInstance(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239060:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getSpeciesTypeInstance(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:238800:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeSpeciesFeatureType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:238552:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getSpeciesFeatureType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:238292:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SubListOfSpeciesFeatures_setRelation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:237126:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SubListOfSpeciesFeatures_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:236958:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SubListOfSpeciesFeatures_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:236778:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentMapInProducts_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:235862:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentMapInProducts_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:235682:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_removeSubListOfSpeciesFeatures(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233910:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_getSubListOfSpeciesFeatures(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233730:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233512:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233332:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeature_removeSpeciesFeatureValue(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:232553:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeature_getSpeciesFeatureValue(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:232293:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentIndexes_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:231027:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentIndexes_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:230847:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureTypes_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:229256:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureTypes_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:229076:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeatureType_removePossibleSpeciesFeatureValue(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:228405:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeatureType_getPossibleSpeciesFeatureValue(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:228145:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutwardBindingSites_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:227050:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutwardBindingSites_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:226870:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_OutwardBindingSite_setBindingStatus(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:226058:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInSpeciesTypeBonds_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:225198:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInSpeciesTypeBonds_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:225018:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeInstances_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:223427:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeInstances_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:223247:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentReferences_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:221656:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentReferences_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:221476:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureValues_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:219996:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureValues_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:219816:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPossibleSpeciesFeatureValues_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:218558:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPossibleSpeciesFeatureValues_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:218378:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesReferencePlugin_removeSpeciesTypeComponentMapInProduct(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:216610:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesReferencePlugin_getSpeciesTypeComponentMapInProduct(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:216374:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_removeSpeciesFeature(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:215276:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_getSubListOfSpeciesFeatures(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:215040:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_getSpeciesFeature(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:214763:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_removeOutwardBindingSite(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:214491:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_getOutwardBindingSite(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:214255:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiCompartmentPlugin_removeCompartmentReference(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:213537:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiCompartmentPlugin_getCompartmentReference(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:213301:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LayoutModelPlugin_getLayout(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:209216:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLayouts_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:207988:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLayouts_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:207808:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeAdditionalGraphicalObject(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:207080:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeTextGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206995:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeReactionGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206878:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeSpeciesGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206795:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeCompartmentGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206712:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getGeneralGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205851:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getAdditionalGraphicalObject(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205733:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getTextGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205613:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getReactionGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205495:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getSpeciesGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205377:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getCompartmentGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205259:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTextGlyphs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:203555:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTextGlyphs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:203375:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactionGlyphs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:202801:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactionGlyphs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:202621:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesGlyphs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:202047:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesGlyphs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:201867:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentGlyphs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:201317:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentGlyphs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:201137:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ReactionGlyph_removeSpeciesReferenceGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:198404:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferenceGlyphs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:197038:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferenceGlyphs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:196858:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_removeSubGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:196052:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_removeReferenceGlyph(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:195962:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReferenceGlyphs_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:194237:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReferenceGlyphs_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:194057:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesReferenceGlyph_setRole(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:191653:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGraphicalObjects_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:185202:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGraphicalObjects_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:185018:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMembers_getByIdRef(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:178429:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMembers_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:178224:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMembers_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:178044:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGroups_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:177118:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGroups_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:176938:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_removeMember(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:175109:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_getMemberByIdRef(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:174909:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_getMember(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:174724:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_setKind(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:174404:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GroupsModelPlugin_removeGroup(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:173403:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GroupsModelPlugin_getGroup(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:173143:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneProducts_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:167962:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneProducts_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:167702:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfObjectives_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:161952:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfObjectives_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:161692:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Objective_removeFluxObjective(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:160947:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Objective_getFluxObjective(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:160687:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Objective_setType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:160367:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneAssociations_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:159555:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneAssociations_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:159375:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxObjectives_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:157862:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxObjectives_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:157602:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxBounds_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:156042:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxBounds_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:155862:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FluxBound_setOperation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:155048:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeGeneAssociation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:151030:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getGeneAssociation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:150794:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeGeneProduct(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:150546:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getGeneProduct(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:150286:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeObjective(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149825:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getObjective(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149565:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeFluxBound(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149293:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getFluxBound(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149018:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Submodel_removeDeletion(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:146001:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Submodel_getDeletion(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:145741:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSubmodels_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:141672:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSubmodels_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:141492:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPorts_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:140365:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPorts_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:140185:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfModelDefinitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:139635:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfModelDefinitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:139455:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfExternalModelDefinitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:138905:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfExternalModelDefinitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:138725:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDeletions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:138175:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDeletions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:137995:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_removeExternalModelDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131666:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_getModel(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131439:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_getExternalModelDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131250:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_removeModelDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131002:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_getModelDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:130747:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompModelPlugin_getPort(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:129704:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompModelPlugin_getSubmodel(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:129294:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTNode_getPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:123317:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTBase_getPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:118773:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTBase_addPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:118604:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setBiologicalQualifierType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107626:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setModelQualifierType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107538:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLNode_getChild(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:95379:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLToken_getNamespacePrefix(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:93151:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLToken_removeNamespace(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:92905:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_getPrefix(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:89739:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:89436:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ConversionProperties_getOption(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:80798:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEventAssignments_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:72565:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEventAssignments_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:72385:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEvents_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:71039:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEvents_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:70859:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Event_removeEventAssignment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:70245:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Event_getEventAssignment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:70041:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferences_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:68103:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferences_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:67919:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesReference_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:67453:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesReference_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:67334:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_removeLocalParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:65602:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:65514:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_getLocalParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:65080:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:64923:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:63700:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:63516:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_removeModifier(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62918:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_removeProduct(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62798:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_removeReactant(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62678:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_getModifier(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62426:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_getProduct(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62205:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_getReactant(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:61984:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfRules_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:57591:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfRules_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:57366:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInitialAssignments_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:55672:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInitialAssignments_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:55492:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalParameters_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:54146:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalParameters_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:53925:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfParameters_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:52985:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfParameters_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:52805:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpecies_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:51401:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpecies_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:51221:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartments_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:48824:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartments_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:48644:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypes_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:46681:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypes_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:46501:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentTypes_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:45604:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentTypes_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:45424:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfUnitDefinitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:44527:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfUnitDefinitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:44306:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionDefinitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:39253:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionDefinitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:39073:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FunctionDefinition_getArgument(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:38405:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeEvent(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:34310:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeReaction(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:34190:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33993:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeInitialAssignment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33869:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33749:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33629:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33509:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpeciesType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33389:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartmentType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33269:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeUnitDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33149:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeFunctionDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33029:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getEvent(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30694:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getModifierSpeciesReference(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30533:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesReference(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30408:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getReaction(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30223:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRuleByVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29939:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRuleByVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29814:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29689:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29564:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRuleByVariable(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29439:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRule(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29250:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignmentBySymbol(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29081:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28935:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getParameter(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28675:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getSpecies(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28454:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartment(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28233:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28012:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartmentType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:27791:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getUnitDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:27570:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getFunctionDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:27349:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:26144:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:26025:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getPlugin(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:20718:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_setSBOTerm(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:19680:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_appendNotes(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:19478:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:19173:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_appendAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:18849:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_setAnnotation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:18730:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementByMetaId(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:16696:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementBySId(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:16567:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderCurve_getElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:293130:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderCurve_getCurveElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:293249:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Polygon_getElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:294499:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiModelPlugin_removeMultiSpeciesType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:212455:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_removeGradientDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266931:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcAnd_removeAssociation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:170108:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcOr_removeAssociation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:171344:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Polygon_removeElement(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:294761:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFbcAssociations_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:164844:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMultiSpeciesTypes_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:240990:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCurveElements_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:314724:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientDefinitions_remove(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:319519:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcAnd_getAssociation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:169695:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiModelPlugin_getMultiSpeciesType(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:212189:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_getGradientDefinition(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266643:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcOr_getAssociation(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:170931:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMultiSpeciesTypes_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:240806:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCurveElements_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:314540:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientDefinitions_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:319335:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFbcAssociations_get(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsVal_unsigned_SS_long (obj, &v); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:164532:9: note: 'argv[1]' was declared here VALUE argv[3]; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTNode_setDefinitionURL(int, VALUE*, VALUE)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:122396:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Linking CXX shared library libSBML.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_ruby_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libSBML.so -o libSBML.so CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lruby -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_ruby_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/bindings/r/CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_r_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/usr/include/R -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'int _p_f_p_q_const__ASTNode__int(const ASTNode_t*)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp:90348:14: warning: unused variable 'arg1' [-Wunused-variable] ASTNode_t *arg1 = (ASTNode_t *) 0 ; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp:90354:7: warning: unused variable 'ecode' [-Wunused-variable] int ecode = 0; ^~~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'int _p_f_p_Model_p_SBMLErrorLog_p_void__int(Model*, SBMLErrorLog*, void*)': /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp:111757:10: warning: unused variable 'arg1' [-Wunused-variable] Model *arg1 = (Model *) 0 ; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp:111758:17: warning: unused variable 'arg2' [-Wunused-variable] SBMLErrorLog *arg2 = (SBMLErrorLog *) 0 ; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp:111759:9: warning: unused variable 'arg3' [-Wunused-variable] void *arg3 = (void *) 0 ; ^~~~ /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp:111765:7: warning: unused variable 'ecode' [-Wunused-variable] int ecode = 0; ^~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Linking CXX shared library libSBML.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_r_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libSBML.so -o libSBML.so CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o -L/usr/lib64/R/lib ../../libsbml-static.a -lR -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_r_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_package make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Create R Package (64bit) cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML.so /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML/inst/libs cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML.R /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML/R cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DR_INTERPRETER="/usr/bin/R" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/create-r-package.cmake -- Created package: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML_5.17.0_R_powerpc64le-redhat-linux-gnu.tar.gz make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_r_package make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Building CXX object src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/LibSBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Linking CXX shared module LibSBML.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o LibSBML.so CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o ../../libsbml-static.a -lperl -lbz2 -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_perl_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles 0 + pushd ../build-docs ~/build/BUILD/libSBML-5.17.0-Source/build-docs ~/build/BUILD/libSBML-5.17.0-Source/build ~/build/BUILD/libSBML-5.17.0-Source/build2 ~/build/BUILD/libSBML-5.17.0-Source + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config/config.sub ++ basename ./config/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config/config.sub '/usr/lib/rpm/redhat/config.sub' -> './config/config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config/config.guess ++ basename ./config/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config/config.guess '/usr/lib/rpm/redhat/config.guess' -> './config/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./config/ltmain.sh + ./configure --build=powerpc64le-redhat-linux-gnu --host=powerpc64le-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-static --with-expat=no --with-libxml=yes --enable-layout --enable-comp --enable-fbc --enable-qual configure: WARNING: unrecognized options: --disable-dependency-tracking checking build system type... powerpc64le-redhat-linux-gnu checking host system type... powerpc64le-redhat-linux-gnu checking for powerpc64le-redhat-linux-gnu-g++... no checking for powerpc64le-redhat-linux-gnu-c++... no checking for powerpc64le-redhat-linux-gnu-gpp... no checking for powerpc64le-redhat-linux-gnu-aCC... no checking for powerpc64le-redhat-linux-gnu-CC... no checking for powerpc64le-redhat-linux-gnu-cxx... no checking for powerpc64le-redhat-linux-gnu-cc++... no checking for powerpc64le-redhat-linux-gnu-cl.exe... no checking for powerpc64le-redhat-linux-gnu-FCC... no checking for powerpc64le-redhat-linux-gnu-KCC... no checking for powerpc64le-redhat-linux-gnu-RCC... no checking for powerpc64le-redhat-linux-gnu-xlC_r... no checking for powerpc64le-redhat-linux-gnu-xlC... no checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for powerpc64le-redhat-linux-gnu-gcc... no checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for a BSD-compatible install... /usr/bin/install -c checking whether make sets $(MAKE)... yes checking for autoconf... autoconf checking for aclocal... aclocal checking whether -Wno-long-double is supported... yes checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking whether ln -s works... yes checking how to recognize dependent libraries... pass_all checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... g++ -E checking for powerpc64le-redhat-linux-gnu-g77... no checking for powerpc64le-redhat-linux-gnu-xlf... no checking for powerpc64le-redhat-linux-gnu-f77... no checking for powerpc64le-redhat-linux-gnu-frt... no checking for powerpc64le-redhat-linux-gnu-pgf77... no checking for powerpc64le-redhat-linux-gnu-cf77... no checking for powerpc64le-redhat-linux-gnu-fort77... no checking for powerpc64le-redhat-linux-gnu-fl32... no checking for powerpc64le-redhat-linux-gnu-af77... no checking for powerpc64le-redhat-linux-gnu-xlf90... no checking for powerpc64le-redhat-linux-gnu-f90... no checking for powerpc64le-redhat-linux-gnu-pgf90... no checking for powerpc64le-redhat-linux-gnu-pghpf... no checking for powerpc64le-redhat-linux-gnu-epcf90... no checking for powerpc64le-redhat-linux-gnu-gfortran... no checking for powerpc64le-redhat-linux-gnu-g95... no checking for powerpc64le-redhat-linux-gnu-xlf95... no checking for powerpc64le-redhat-linux-gnu-f95... no checking for powerpc64le-redhat-linux-gnu-fort... no checking for powerpc64le-redhat-linux-gnu-ifort... no checking for powerpc64le-redhat-linux-gnu-ifc... no checking for powerpc64le-redhat-linux-gnu-efc... no checking for powerpc64le-redhat-linux-gnu-pgfortran... no checking for powerpc64le-redhat-linux-gnu-pgf95... no checking for powerpc64le-redhat-linux-gnu-lf95... no checking for powerpc64le-redhat-linux-gnu-ftn... no checking for powerpc64le-redhat-linux-gnu-nagfor... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking the maximum length of command line arguments... 1572864 checking command to parse /usr/bin/nm -B output from gcc object... ok checking for objdir... .libs checking for powerpc64le-redhat-linux-gnu-ar... no checking for ar... ar checking for powerpc64le-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking for powerpc64le-redhat-linux-gnu-strip... no checking for strip... strip checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC checking if gcc PIC flag -fPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking whether the gcc linker (/usr/bin/ld -m elf64ppc) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /usr/bin/ld -m elf64ppc checking if the linker (/usr/bin/ld -m elf64ppc) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf64ppc) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC checking if g++ PIC flag -fPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/bin/ld -m elf64ppc) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so (cached) (cached) checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking whether the gfortran linker (/usr/bin/ld -m elf64ppc) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so (cached) (cached) checking how to hardcode library paths into programs... immediate checking for bash... /usr/bin/bash checking if dolt supports this host... no, falling back to libtool checking for isnan in -lm... yes checking for xml2-config... /usr/bin/xml2-config checking for libxml2 - version >= 2.6.16... yes (version 2.9.8) checking for zlib library... yes checking for deflate in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for possibly buggy zlib... no checking for bzip2 library... yes checking for BZ2_bzopen in -lbz2... yes checking bzlib.h usability... yes checking bzlib.h presence... yes checking for bzlib.h... yes checking for ANSI C header files... (cached) yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking whether byte ordering is bigendian... no checking for an ANSI C-conforming const... yes checking for size_t... yes configure: creating ./config.status config.status: creating config/makefile-common-vars.mk config.status: creating config/lt_link_helper.sh config.status: creating config/mkoctfile_wrapper.sh config.status: creating config/chk_swig_version.sh config.status: creating ./Makefile config.status: creating libsbml.spec config.status: creating src/Makefile config.status: creating src/sbml/common/Makefile config.status: creating src/sbml/common/libsbml-version.h config.status: creating src/bindings/Makefile config.status: creating src/bindings/python/Makefile config.status: creating src/bindings/python/setup.py config.status: creating src/bindings/perl/Makefile config.status: creating src/bindings/perl/Makefile.PL config.status: creating src/bindings/matlab/Makefile config.status: creating src/bindings/matlab/test/Makefile config.status: creating src/bindings/octave/Makefile config.status: creating src/bindings/octave/test/Makefile config.status: creating src/bindings/java/Makefile config.status: creating src/bindings/java/Manifest.txt config.status: creating src/bindings/ruby/Makefile config.status: creating src/bindings/csharp/Makefile config.status: creating src/sbml/annotation/Makefile config.status: creating src/sbml/annotation/test/Makefile config.status: creating src/sbml/math/Makefile config.status: creating src/sbml/math/test/Makefile config.status: creating src/sbml/math-legacy/Makefile config.status: creating src/sbml/math-legacy/test/Makefile config.status: creating src/sbml/units/Makefile config.status: creating src/sbml/units/test/Makefile config.status: creating src/sbml/Makefile config.status: creating src/sbml/test/Makefile config.status: creating src/sbml/util/Makefile config.status: creating src/sbml/util/test/Makefile config.status: creating src/sbml/validator/Makefile config.status: creating src/sbml/validator/constraints/Makefile config.status: creating src/sbml/validator/test/Makefile config.status: creating src/sbml/validator/test/test-data/Makefile config.status: creating src/sbml/validator/test/test-data/sbml-general-consistency-constraints/Makefile config.status: creating src/sbml/xml/Makefile config.status: creating src/sbml/xml/test/Makefile config.status: creating src/sbml/compress/Makefile config.status: creating src/sbml/extension/Makefile config.status: creating src/sbml/extension/test/Makefile config.status: creating src/sbml/extension/RegisterExtensions.h config.status: creating src/sbml/extension/RegisterExtensions.cxx config.status: creating src/sbml/conversion/Makefile config.status: creating src/sbml/conversion/test/Makefile config.status: creating src/sbml/packages/Makefile config.status: creating src/sbml/packages/comp/Makefile config.status: creating src/sbml/packages/comp/common/Makefile config.status: creating src/sbml/packages/comp/extension/Makefile config.status: creating src/sbml/packages/comp/extension/test/Makefile config.status: creating src/sbml/packages/comp/sbml/Makefile config.status: creating src/sbml/packages/comp/sbml/test/Makefile config.status: creating src/sbml/packages/comp/util/Makefile config.status: creating src/sbml/packages/comp/util/test/Makefile config.status: creating src/sbml/packages/comp/validator/Makefile config.status: creating src/sbml/packages/comp/validator/constraints/Makefile config.status: creating src/sbml/packages/comp/validator/test/Makefile config.status: creating src/sbml/packages/comp/validator/test/test-data/Makefile config.status: creating examples/c++/comp/Makefile config.status: creating examples/c/comp/Makefile config.status: creating src/sbml/packages/fbc/common/Makefile config.status: creating src/sbml/packages/fbc/extension/Makefile config.status: creating src/sbml/packages/fbc/extension/test/Makefile config.status: creating src/sbml/packages/fbc/Makefile config.status: creating src/sbml/packages/fbc/sbml/Makefile config.status: creating src/sbml/packages/fbc/util/Makefile config.status: creating src/sbml/packages/fbc/validator/constraints/Makefile config.status: creating src/sbml/packages/fbc/validator/Makefile config.status: creating src/sbml/packages/fbc/validator/test/Makefile config.status: creating src/sbml/packages/fbc/validator/test/test-data/Makefile config.status: creating examples/c++/fbc/Makefile config.status: creating src/sbml/packages/layout/Makefile config.status: creating src/sbml/packages/layout/common/Makefile config.status: creating src/sbml/packages/layout/extension/Makefile config.status: creating src/sbml/packages/layout/sbml/Makefile config.status: creating src/sbml/packages/layout/sbml/test/Makefile config.status: creating src/sbml/packages/layout/util/Makefile config.status: creating src/sbml/packages/layout/validator/Makefile config.status: creating src/sbml/packages/layout/validator/constraints/Makefile config.status: creating src/sbml/packages/layout/validator/test/Makefile config.status: creating src/sbml/packages/layout/validator/test/test-data/Makefile config.status: creating src/sbml/packages/qual/Makefile config.status: creating src/sbml/packages/qual/common/Makefile config.status: creating src/sbml/packages/qual/extension/Makefile config.status: creating src/sbml/packages/qual/sbml/Makefile config.status: creating src/sbml/packages/qual/sbml/test/Makefile config.status: creating src/sbml/packages/qual/validator/Makefile config.status: creating src/sbml/packages/qual/validator/constraints/Makefile config.status: creating src/sbml/packages/qual/validator/test/Makefile config.status: creating src/sbml/packages/qual/validator/test/test-data/Makefile config.status: creating examples/c++/qual/Makefile config.status: creating docs/Makefile config.status: creating docs/index.html config.status: creating docs/src/Makefile config.status: creating docs/src/doxygen-config-c.txt config.status: creating docs/src/doxygen-config-cpp.txt config.status: creating docs/src/doxygen-config-csharp.txt config.status: creating docs/src/doxygen-config-octave.txt config.status: creating docs/src/doxygen-config-python.txt config.status: creating docs/src/doxygen-config-perl.txt config.status: creating docs/src/doxygen-config-matlab.txt config.status: creating docs/src/common-text/libsbml-downloading.html config.status: creating docs/src/common-text/libsbml-group-comp-intro.html config.status: creating docs/src/common-text/libsbml-group-fbc-intro.html config.status: creating docs/src/common-text/libsbml-group-groups-intro.html config.status: creating docs/src/common-text/libsbml-group-layout-intro.html config.status: creating docs/src/common-text/libsbml-group-multi-intro.html config.status: creating docs/src/common-text/libsbml-group-qual-intro.html config.status: creating docs/src/common-text/libsbml-group-render-intro.html config.status: creating docs/src/common-text/libsbml-installation.html config.status: creating docs/src/common-text/libsbml-version.html config.status: creating docs/src/common-text/sbml-specifications-table.html config.status: creating docs/src/java-substitutions/libsbmlConstants.java config.status: creating examples/c/Makefile config.status: creating examples/c++/Makefile config.status: creating examples/java/Makefile config.status: creating examples/csharp/Makefile config.status: creating examples/c++/layout/Makefile config.status: creating src/bindings/csharp/local-downcast-astplugins.i config.status: creating src/bindings/csharp/local-downcast-extension.i config.status: creating src/bindings/csharp/local-downcast-namespaces.i config.status: creating src/bindings/csharp/local-downcast-converters.i config.status: creating src/bindings/csharp/local-packages.i config.status: creating src/bindings/java/local-downcast-astplugins.i config.status: creating src/bindings/java/local-downcast-extension.i config.status: creating src/bindings/java/local-downcast-namespaces.i config.status: creating src/bindings/java/local-downcast-converters.i config.status: creating src/bindings/java/local-packages.i config.status: creating src/bindings/perl/local-downcast.cpp config.status: creating src/bindings/perl/local-downcast-astplugins.cpp config.status: creating src/bindings/perl/local-downcast-extension.cpp config.status: creating src/bindings/perl/local-downcast-namespaces.cpp config.status: creating src/bindings/perl/local-downcast-converters.cpp config.status: creating src/bindings/perl/local-downcast-plugins.cpp config.status: creating src/bindings/perl/local-packages.i config.status: creating src/bindings/python/local-downcast.cpp config.status: creating src/bindings/python/local-downcast-astplugins.cpp config.status: creating src/bindings/python/local-downcast-extension.cpp config.status: creating src/bindings/python/local-downcast-namespaces.cpp config.status: creating src/bindings/python/local-downcast-converters.cpp config.status: creating src/bindings/python/local-downcast-plugins.cpp config.status: creating src/bindings/python/local-packages.i config.status: creating src/bindings/ruby/local-downcast.cpp config.status: creating src/bindings/ruby/local-downcast-astplugins.cpp config.status: creating src/bindings/ruby/local-downcast-extension.cpp config.status: creating src/bindings/ruby/local-downcast-namespaces.cpp config.status: creating src/bindings/ruby/local-downcast-converters.cpp config.status: creating src/bindings/ruby/local-downcast-plugins.cpp config.status: creating src/bindings/ruby/local-packages.i config.status: creating src/bindings/swig/libsbml-packages.h config.status: creating src/bindings/swig/libsbml-packages.i config.status: creating macosx/Makefile config.status: creating macosx/build.sh config.status: creating macosx/resources/package-intro.txt config.status: creating macosx/resources/package-readme.txt config.status: creating macosx/libsbml-package.pmdoc/01local-contents.xml config.status: creating macosx/libsbml-package.pmdoc/01local.xml config.status: creating macosx/libsbml-package.pmdoc/index.xml config.status: creating src/sbml/common/libsbml-config-common.h config.status: creating src/sbml/common/libsbml-package.h config.status: src/sbml/common/libsbml-package.h is unchanged config.status: creating src/sbml/common/libsbml-namespace.h config.status: src/sbml/common/libsbml-namespace.h is unchanged configure: WARNING: unrecognized options: --disable-dependency-tracking ---------------------------------------------------------------------- libSBML version 5.17.0 ---------------------------------------------------------------------- More information and the latest version are available online at http://sbml.org/Software/libSBML Please report problems using the issue tracker at http://sbml.org/software/libsbml/issue-tracker To contact the developers directly, email libsbml-team@googlegroups.com Configured on host "bdd23dafe2f64b25a758830c7f0761d7" host type = linux host vendor = redhat host operating system = linux-gnu host CPU architecture = powerpc64le General build flags: CC = gcc CXX = g++ CPPFLAGS = -DLINUX CFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection CFLAGS_ARCH = CXXFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection CXXFLAGS_ARCH = LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld LDFLAGS_ARCH = LIBS = -lm -lz -lbz2 XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LDFLAGS for XML = LIBS for XML = -lxml2 -lz -llzma -lm -ldl XML2_CONFIG = /usr/bin/xml2-config Other libSBML configuration settings: Installation $prefix = /usr Using zlib with path = autodetect Using bzip2 with path = autodetect Support for SBML packages: SBML 'comp' = yes SBML 'fbc' = yes SBML 'layout' = yes SBML 'qual' = yes Other potentially important settings: Compression support is enabled for .zip, .gz and .bz2 files Value of $LD_LIBRARY_PATH = ---------------------------------------------------------------------- + /usr/bin/make -O -j2 libsbml.pc + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.DK9v2d + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le ++ dirname /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le + cd libSBML-5.17.0-Source + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/cmake -H/builddir/build/BUILD/libSBML-5.17.0-Source -B/builddir/build/BUILD/libSBML-5.17.0-Source/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/CMakeFiles/sbml-static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/CMakeFiles/sbml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 35%] Built target sbml-static /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/CMakeFiles/sbml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/CMakeFiles/sbml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Built target sbml /usr/bin/make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Built target test_comp_extensions /usr/bin/make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target test_comp_sbase /usr/bin/make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Built target test_comp_util /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Built target test_comp_validator /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Built target test_sbml_package_fbc /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 73%] Built target test_fbc_validator /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Built target test_extension_package_groups /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Built target test_groups_validator /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target test_sbml_package_layout /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target test_layout_validator /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_sbml_package_multi /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_multi_validator /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_extension_package_qual /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_sbml_package_qual /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Built target test_qual_validator /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Built target test_sbml_package_render /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 82%] Built target test_render_validator /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 83%] Built target test_sbml_annotation /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Built target test_sbml_conversion /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 85%] Built target test_sbml_extension /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Built target test_sbml_math /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Built target test_sbml_sbml /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 96%] Built target test_sbml_units /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Built target test_sbml_util /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Built target test_sbml_validator /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target test_sbml_xml /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/csharp/CMakeFiles/binding_csharp_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target binding_csharp_swig /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/csharp/CMakeFiles/binding_csharp_native_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target binding_csharp_native_lib /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build.make src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/csharp/CMakeFiles/binding_csharp_managed_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target binding_csharp_managed_lib /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target binding_perl_swig /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target binding_perl_lib /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_python_swig /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_python_lib /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_ruby_swig /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_ruby_lib /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/r/CMakeFiles/binding_r_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_r_swig /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Nothing to be done for 'src/bindings/r/CMakeFiles/binding_r_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_r_lib /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Create R Package (64bit) cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML.so /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML/inst/libs cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML.R /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML/R cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DR_INTERPRETER="/usr/bin/R" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/create-r-package.cmake -- Created package: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML_5.17.0_R_powerpc64le-redhat-linux-gnu.tar.gz make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [100%] Built target binding_r_package make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/COPYING.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/FUNDING.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/LICENSE.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/NEWS.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/OLD_NEWS.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/README.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/VERSION.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/pkgconfig/libsbml.pc -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/common/CompExtensionTypes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/common/compfwd.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/extension/CompExtension.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/extension/CompModelPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/extension/CompSBasePlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/CompBase.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/Deletion.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ExternalModelDefinition.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ListOfDeletions.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ListOfModelDefinitions.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ListOfPorts.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ListOfReplacedElements.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ListOfSubmodels.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ModelDefinition.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/Port.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ReplacedBy.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/ReplacedElement.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/Replacing.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/SBaseRef.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/sbml/Submodel.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/util/CompFlatteningConverter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/util/SBMLFileResolver.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/util/SBMLResolver.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/util/SBMLResolverRegistry.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/util/SBMLUri.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/CompConsistencyValidator.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/CompSBMLError.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/CompSBMLErrorTable.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/CompUnitConsistencyValidator.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/CompValidator.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/constraints/ClassReplacements.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/constraints/CompIdBase.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.h -- Installing: 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/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/FormulaFormatter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/FormulaParser.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/FormulaTokenizer.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/L3FormulaFormatter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/L3Parser.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/L3ParserSettings.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/include/sbml/math/MathML.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/libsbml.so.5.17.0 -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/libsbml.so.5 -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/libsbml.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/cmake/sbml-config.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/cmake/sbml-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/cmake/sbml-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/libsbml-static.a -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/cmake/sbml-static-config.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/cmake/sbml-static-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/cmake/sbml-static-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib/mono/libsbmlcsP/libsbmlcs.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib/mono/libsbmlcsP/libsbmlcsP.dll -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/perl5/vendor_perl/LibSBML.pod -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/perl5/vendor_perl/LibSBML.pm -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/perl5/vendor_perl/auto/libSBML/LibSBML.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/python3.7/site-packages/libsbml/_libsbml.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/python3.7/site-packages/libsbml.pth -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/python3.7/site-packages/libsbml/libsbml.py -- Installing: /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/ruby/vendor_ruby/libSBML.so make: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' Notice: the libSBML R interface must be installed separately. To install it, please execute the following shell command: R CMD INSTALL /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML_5.17.0_R_powerpc64le-redhat-linux-gnu.tar.gz + rm -f /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/FUNDING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/NEWS.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/OLD_NEWS.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/README.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/libsbml/VERSION.txt + mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/R/library + R CMD INSTALL -l /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/R/library build/src/bindings/r/libSBML_5.17.0_R_powerpc64le-redhat-linux-gnu.tar.gz * installing *binary* package 'libSBML' ... * DONE (libSBML) + rm -rf /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/R/library/libSBML/R.css + make -C build-docs install-pc DESTDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le make: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build-docs' /builddir/build/BUILD/libSBML-5.17.0-Source/build-docs/config/install-sh -c libsbml.pc -m 0644 "/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/pkgconfig/libsbml.pc" make: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build-docs' + install -Dm0644 src/bindings/ruby/README.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml/README-ruby.txt + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 5.17.0-11.fc30 --unique-debug-suffix -5.17.0-11.fc30.ppc64le --unique-debug-src-base libsbml-5.17.0-11.fc30.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libSBML-5.17.0-Source explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/R/library/libSBML/libs/libSBML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib/mono/libsbmlcsP/libsbmlcs.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib/mono/libsbmlcsP/libsbmlcs.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/R/library/libSBML/libs/libSBML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/ruby/vendor_ruby/libSBML.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/ruby/vendor_ruby/libSBML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/python3.7/site-packages/libsbml/_libsbml.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/python3.7/site-packages/libsbml/_libsbml.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/perl5/vendor_perl/auto/libSBML/LibSBML.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/perl5/vendor_perl/auto/libSBML/LibSBML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/libsbml.so.5.17.0 extracting debug info from /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/libsbml.so.5.17.0 /usr/lib/rpm/sepdebugcrcfix: Updated 6 CRC32s, 0 CRC32s did match. cpio: build/src/L3Parser.cpp: Cannot stat: No such file or directory cpio: build/src/L3Parser.ypp: Cannot stat: No such file or directory 141249 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 Bytecompiling .py files below /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib/debug/usr/lib64/python3.7 using /usr/bin/python3.7 Bytecompiling .py files below /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/lib64/python3.7 using /usr/bin/python3.7 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.JV4pBg + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/libSBML-5.17.0-Source/build ~/build/BUILD/libSBML-5.17.0-Source + cd libSBML-5.17.0-Source + pushd build + ctest --force-new-ctest-process -VV -E test_ruby_binding UpdateCTestConfiguration from :/builddir/build/BUILD/libSBML-5.17.0-Source/build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/libSBML-5.17.0-Source/build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/libSBML-5.17.0-Source/build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/libSBML-5.17.0-Source/build/DartConfiguration.tcl Test project /builddir/build/BUILD/libSBML-5.17.0-Source/build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_comp_extensions_run 1: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test/test_comp_extensions 1: Environment variables: 1: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test 1: Test timeout computed to be: 3000 1: Running suite(s): SBMLCompExtensionObjects 1: TestMultipleNamespaces 1: SBMLCompCheckConsistency 1: 100%: Checks: 14, Failures: 0, Errors: 0 1/69 Test #1: test_comp_extensions_run ............... Passed 1.13 sec test 2 Start 2: test_comp_sbase_run 2: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test/test_comp_sbase 2: Environment variables: 2: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test 2: Test timeout computed to be: 3000 2: Running suite(s): SBMLCompSBaseObjects 2: SBMLCompSBaseObjects 2: comp_deletion 2: comp_externalModelDefinition 2: comp_modelDefinition 2: comp_port 2: comp_replacedBy 2: comp_replacedElement 2: comp_sBaseRef 2: comp_submodel 2: 100%: Checks: 69, Failures: 0, Errors: 0 2/69 Test #2: test_comp_sbase_run .................... Passed 0.63 sec test 3 Start 3: test_comp_util_run 3: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test/test_comp_util 3: Environment variables: 3: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test 3: Test timeout computed to be: 3000 3: Running suite(s): SBMLCompURIResolvers 3: SBMLCompLevelVersionConversion 3: SBMLCompFlatteningUnknownPackageRefs 3: SBMLCompFlatteningErrorMessages 3: SBMLCompFlatteningConverter 3: ExternalModelResolving 3: SBMLCompFlatteningNewFlags 3: SBMLCompFlatteningConverterStripPackage 3: 100%: Checks: 354, Failures: 0, Errors: 0 3/69 Test #3: test_comp_util_run ..................... Passed 6.97 sec test 4 Start 4: test_comp_validator_run 4: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test/test_comp_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test" 4: Environment variables: 4: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test 4: Test timeout computed to be: 3000 4: 4: Validator testrunner 4: ==================== 4: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/test-data 4: 4: Testing General XML Consistency Constraints (20000 - 29999). 4: 100%: Checks: 279, Failures: 0 4: Testing Id Consistency Constraints (10300 - 10399). 4: 100%: Checks: 14, Failures: 0 4: Testing Unit Consistency Constraints (10500 - 10599). 4: 100%: Checks: 20, Failures: 0 4/69 Test #4: test_comp_validator_run ................ Passed 2.32 sec test 5 Start 5: test_sbml_package_fbc_run 5: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test/test_sbml_package_fbc 5: Environment variables: 5: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test 5: Test timeout computed to be: 3000 5: Running suite(s): FbcExtension 5: WriteFbcExtension 5: ReadFbcExtension 5: FbcAssociation 5: 100%: Checks: 36, Failures: 0, Errors: 0 5/69 Test #5: test_sbml_package_fbc_run .............. Passed 0.91 sec test 6 Start 6: test_fbc_validator_run 6: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test/test_fbc_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test" 6: Environment variables: 6: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test 6: Test timeout computed to be: 3000 6: 6: Validator testrunner 6: ==================== 6: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/test-data 6: 6: Testing General XML Consistency Constraints (20000 - 29999). 6: 100%: Checks: 170, Failures: 0 6: Testing Id Consistency Constraints (10300 - 10399). 6: 100%: Checks: 11, Failures: 0 6/69 Test #6: test_fbc_validator_run ................. Passed 1.50 sec test 7 Start 7: test_extension_package_groups_run 7: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test/test_extension_package_groups 7: Environment variables: 7: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test 7: Test timeout computed to be: 3000 7: Running suite(s): GroupsExtension 7: WriteGroupsExtension 7: ReadGroupsExtension 7: GroupsModelPlugin 7: 100%: Checks: 25, Failures: 0, Errors: 0 7/69 Test #7: test_extension_package_groups_run ...... Passed 0.52 sec test 8 Start 8: test_groups_validator_run 8: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test/test_groups_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test" 8: Environment variables: 8: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test 8: Test timeout computed to be: 3000 8: 8: Validator testrunner 8: ==================== 8: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/test-data 8: 8: Testing General XML Consistency Constraints (20000 - 29999). 8: 100%: Checks: 95, Failures: 0 8: Testing Id Consistency Constraints (10300 - 10399). 8: 100%: Checks: 11, Failures: 0 8/69 Test #8: test_groups_validator_run .............. Passed 1.00 sec test 9 Start 9: test_sbml_package_layout_run 9: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test/test_sbml_package_layout 9: Environment variables: 9: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test 9: Test timeout computed to be: 3000 9: Running suite(s): Point 9: Dimensions 9: BoundingBox 9: LineSegment 9: CubicBezier 9: Curve 9: GraphicalObject 9: CompartmentGlyph 9: SpeciesGlyph 9: ReactionGlyph 9: GeneralGlyph 9: ReferenceGlyph 9: SpeciesReferenceGlyph 9: TextGlyph 9: Layout 9: LayoutCreation 9: LayoutFormatter 9: SBMLHandler 9: LayoutWriting 9: 100%: Checks: 288, Failures: 0, Errors: 0 9/69 Test #9: test_sbml_package_layout_run ........... Passed 1.42 sec test 10 Start 10: test_layout_validator_run 10: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test/test_layout_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test" 10: Environment variables: 10: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test 10: Test timeout computed to be: 3000 10: 10: Validator testrunner 10: ==================== 10: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/test-data 10: 10: Testing General XML Consistency Constraints (20000 - 29999). 10: 100%: Checks: 223, Failures: 0 10: Testing Id Consistency Constraints (10300 - 10399). 10: 100%: Checks: 18, Failures: 0 10/69 Test #10: test_layout_validator_run .............. Passed 1.98 sec test 11 Start 11: test_sbml_package_multi_run 11: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test/test_sbml_package_multi 11: Environment variables: 11: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test 11: Test timeout computed to be: 3000 11: Running suite(s): MultiExtension 11: MultiCheckConsistency 11: MultiAST 11: 100%: Checks: 16, Failures: 0, Errors: 0 11/69 Test #11: test_sbml_package_multi_run ............ Passed 0.58 sec test 12 Start 12: test_multi_validator_run 12: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test/test_multi_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test" 12: Environment variables: 12: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test 12: Test timeout computed to be: 3000 12: 12: Validator testrunner 12: ==================== 12: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/test-data 12: 12: Testing MathML Consistency Constraints (10200 - 10299). 12: 100%: Checks: 5, Failures: 0 12: Testing General XML Consistency Constraints (20000 - 29999). 12: 100%: Checks: 123, Failures: 0 12: Testing Id Consistency Constraints (10300 - 10999). 12: 100%: Checks: 16, Failures: 0 12/69 Test #12: test_multi_validator_run ............... Passed 1.05 sec test 13 Start 13: test_extension_package_qual_run 13: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test/test_extension_package_qual 13: Environment variables: 13: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test 13: Test timeout computed to be: 3000 13: Running suite(s): QualExtension 13: WriteQualExtension 13: ReadQualExtension 13: GetAllElements 13: 100%: Checks: 20, Failures: 0, Errors: 0 13/69 Test #13: test_extension_package_qual_run ........ Passed 0.58 sec test 14 Start 14: test_sbml_package_qual_run 14: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test/test_sbml_package_qual 14: Environment variables: 14: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test 14: Test timeout computed to be: 3000 14: Running suite(s): Input 14: Output 14: FunctionTerm 14: Transition 14: QualitativeSpecies 14: DefaultTerm 14: ListOfFunctionTerms 14: CopyAndClone 14: 100%: Checks: 73, Failures: 0, Errors: 0 14/69 Test #14: test_sbml_package_qual_run ............. Passed 0.68 sec test 15 Start 15: test_qual_validator_run 15: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test/test_qual_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test" 15: Environment variables: 15: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test 15: Test timeout computed to be: 3000 15: 15: Validator testrunner 15: ==================== 15: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/test-data 15: 15: Testing General XML Consistency Constraints (20000 - 29999). 15: 100%: Checks: 81, Failures: 0 15: Testing Id Consistency Constraints (10300 - 10399). 15: 100%: Checks: 4, Failures: 0 15: Testing Math Consistency Constraints (10200 - 10299). 15: 100%: Checks: 3, Failures: 0 15/69 Test #15: test_qual_validator_run ................ Passed 1.20 sec test 16 Start 16: test_sbml_package_render_run 16: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test/test_sbml_package_render 16: Environment variables: 16: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test 16: Test timeout computed to be: 3000 16: Running suite(s): RenderExtension 16: RelAbsVector 16: ColorDefinition 16: GradientStop 16: RenderPoint 16: RenderCubicBezier 16: GradientBaseTest 16: LinearGradient 16: RadialGradient 16: Transformation 16: Transformation2D 16: Image 16: GraphicalPrimitive1D 16: RenderCurve 16: Text 16: GraphicalPrimitive2D 16: Rectangle 16: Ellipse 16: Polygon 16: Group 16: LineEnding 16: Style 16: GlobalStyle 16: LocalStyle 16: RenderInformationBase 16: GlobalRenderInformation 16: LocalRenderInformation 16: RenderReading 16: RenderWriting 16: 100%: Checks: 136, Failures: 0, Errors: 0 16/69 Test #16: test_sbml_package_render_run ........... Passed 1.68 sec test 17 Start 17: test_render_validator_run 17: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test/test_render_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test" 17: Environment variables: 17: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test 17: Test timeout computed to be: 3000 17: 17: Validator testrunner 17: ==================== 17: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/test-data 17: 17: Testing General XML Consistency Constraints (20000 - 29999). 17: 100%: Checks: 111, Failures: 0 17/69 Test #17: test_render_validator_run .............. Passed 2.10 sec test 18 Start 18: test_sbml_annotation_run 18: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test/test_sbml_annotation 18: Environment variables: 18: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test 18: Test timeout computed to be: 3000 18: Running suite(s): CVTerms 18: CVTerms_newSetters 18: ModelHistory 18: Date_newSetters 18: ModelCreator_newSetters 18: ModelHistory_newSetters 18: CopyAndClone 18: RDFAnnotation 18: RDFAnnotation2 18: Validation 18: RDFAnnotation_C 18: L3ModelHistory 18: SyncAnnotation 18: RDFAnnotationMetaid 18: RDFAnnotationNestedCVTerm 18: RDFAnnotationV4 18: 100%: Checks: 180, Failures: 0, Errors: 0 18/69 Test #18: test_sbml_annotation_run ............... Passed 1.33 sec test 19 Start 19: test_sbml_conversion_run 19: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test/test_sbml_conversion 19: Environment variables: 19: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test 19: Test timeout computed to be: 3000 19: Running suite(s): ConversionOption 19: SBMLRuleConverter 19: ConversionProperties 19: SBMLConverterRegistry 19: UnitsConverter 19: UnitsConverter2 19: UnitsConverterL2 19: InferUnitsConverter 19: StripPackageConverter 19: LevelVersionConverter 19: RateOfConverter 19: 100%: Checks: 170, Failures: 0, Errors: 0 19/69 Test #19: test_sbml_conversion_run ............... Passed 1.29 sec test 20 Start 20: test_sbml_extension_run 20: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test/test_sbml_extension 20: Environment variables: 20: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test 20: Test timeout computed to be: 3000 20: Running suite(s): SBaseExtensionPoint 20: SBasePlugin 20: SBasePluginCreator 20: SBasePluginCreatorBase 20: SBMLDocumentPlugin 20: SBMLExtension 20: SBMLExtensionNamespaces 20: SBMLExtensionRegistry 20: TestUnknownPackages 20: 100%: Checks: 30, Failures: 0, Errors: 0 20/69 Test #20: test_sbml_extension_run ................ Passed 0.46 sec test 21 Start 21: test_sbml_math_run 21: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test/test_sbml_math 21: Environment variables: 21: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test 21: Test timeout computed to be: 3000 21: Running suite(s): ASTNode 21: FormulaFormatter 21: FormulaParser 21: L3FormulaFormatter 21: L3FormulaParser 21: L3FormulaParserC 21: FormulaTokenizer 21: ReadMathML 21: NewReadMathML 21: WriteMathML 21: WriteMathMLFromAST 21: NewWriteMathMLFromAST 21: test-data/mathML_1.xml 21: test-data/mathML_2.xml 21: TestValidASTNode 21: NewASTNode 21: TestChildFunctions 21: TestGetValue 21: 100%: Checks: 1035, Failures: 0, Errors: 0 21/69 Test #21: test_sbml_math_run ..................... Passed 1.98 sec test 22 Start 22: test_sbml_sbml_run 22: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test/test_sbml_sbml 22: Environment variables: 22: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test 22: Test timeout computed to be: 3000 22: Running suite(s): ReadSBML 22: SBMLValidator API 22: RenameIDs 22: RemoveFromParent 22: GetMultipleObjects 22: WriteSBML 22: WriteL3SBML 22: WriteL3V2SBML 22: AlgebraicRule 22: AssignmentRule 22: Compartment 22: L3_Compartment 22: Compartment_newSetters 22: CompartmentType 22: CompartmentType_newSetters 22: CompartmentVolumeRule 22: Constraint 22: Constraint_newSetters 22: Delay 22: Event 22: L3_Event 22: Event_newSetters 22: EventAssignment 22: EventAssignment_newSetters 22: FunctionDefinition 22: FunctionDefinition_newSetters 22: InitialAssignment 22: InitialAssignment_newSetters 22: KineticLaw 22: KineticLaw_newSetters 22: L3_KineticLaw 22: ListOf 22: Model 22: L3_Model 22: Model_newSetters 22: ModifierSpeciesReference 22: Parameter 22: L3_Parameter 22: L3_LocalParameter 22: Parameter_newSetters 22: ParameterRule 22: Priority 22: RateRule 22: Reaction 22: L3_Reaction 22: Reaction_newSetters 22: Rule 22: Rule_newSetters 22: SBase 22: SBase_newSetters 22: Species 22: L3_Species 22: Species_newSetters 22: SpeciesReference 22: L3_SpeciesReference 22: SpeciesReference_newSetters 22: SpeciesConcentrationRule 22: SpeciesType 22: SpeciesType_newSetters 22: StoichiometryMath 22: Trigger 22: L3Trigger 22: Unit 22: L3_Unit 22: Unit_newSetters 22: UnitDefinition 22: UnitDefinition_newSetters 22: UnitKind 22: CopyAndClone 22: SBMLConvert 22: SBMLConvertStrict 22: SBMLConvertFromL3V2 22: SBMLDocument 22: SBMLError 22: test-data/l1v1-branch.xml 22: test-data/l1v1-units.xml 22: test-data/l1v1-rules.xml 22: test-data/l1v1-minimal.xml 22: test-data/l2v1-assignment.xml 22: test-data/l2v2-newComponents.xml 22: test-data/l2v3-all.xml 22: test-data/l2v4-new.xml 22: test-data/l3v1-new.xml 22: test-data/l2v5-all.xml 22: test-data/l3v2-all.xml 22: test-data/l3v2-no-model.xml 22: test-data/l3v2-empty-lo-1.xml 22: test-data/l3v2-empty-lo-2.xml 22: test-data/l3v2-empty-math.xml 22: test-data/l3v2-empty-event.xml 22: test-data/l3v2-empty-event2.xml 22: ConsistencyChecks 22: ParentObject 22: AncestorObject 22: InternalConsistencyChecks 22: HasReqdAtt 22: HasReqdElements 22: SBMLNamespaces 22: SyntaxChecker 22: SBMLConstructorException 22: SBMLTransforms 22: GetMultipleObjects 22: LevelCompatibility 22: SBaseIdName 22: Generic Attribute Functions 22: 100%: Checks: 1730, Failures: 0, Errors: 0 22/69 Test #22: test_sbml_sbml_run ..................... Passed 3.91 sec test 23 Start 23: test_sbml_units_run 23: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test/test_sbml_units 23: Environment variables: 23: srcdir=/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test 23: Test timeout computed to be: 3000 23: Running suite(s): UtilsUnit 23: UtilsUnitDefinition 23: UnitFormulaFormatter 23: UnitFormulaFormatter1 23: FormulaUnitData 23: FormulaUnitDataMap 23: DerivedUnitDefinition 23: UnitFormulaFormatter2 23: CalcUnitDefinition 23: UnitFormulaFormatter3 23: DerivedUnitDefinitionUndefined 23: 100%: Checks: 173, Failures: 0, Errors: 0 23/69 Test #23: test_sbml_units_run .................... Passed 1.61 sec test 24 Start 24: test_sbml_util_run 24: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test/test_sbml_util 24: Test timeout computed to be: 3000 24: Running suite(s): memory 24: util 24: List 24: Stack 24: StringBuffer 24: 100%: Checks: 57, Failures: 0, Errors: 0 24/69 Test #24: test_sbml_util_run ..................... Passed 0.05 sec test 25 Start 25: test_sbml_validator_run 25: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test/test_sbml_validator "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test" 25: Test timeout computed to be: 3000 25: 25: Validator testrunner 25: ==================== 25: using test data from : /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/test-data 25: using conversion test data from: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/test-data-conversion 25: 25: Testing Bad XML Constraints (0000 - 10000). 25: 100%: Checks: 55, Failures: 0 25: Testing General XML Consistency Constraints (10000 - 10199). 25: 100%: Checks: 195, Failures: 0 25: Testing General MathML Consistency Constraints (10200 - 10299). 25: 100%: Checks: 508, Failures: 0 25: Testing Id Consistency Constraints (10300 - 10399). 25: 100%: Checks: 509, Failures: 0 25: Testing General Annotation Consistency Constraints (10400 - 10499). 25: 100%: Checks: 65, Failures: 0 25: Testing Unit Consistency Constraints (10500 - 10599). 25: 100%: Checks: 1177, Failures: 0 25: Testing Unit Consistency Constraints (20000 - 29999). 25: 100%: Checks: 362, Failures: 0 25: Testing Overdetermined Constraints (10600 - 10699). 25: 100%: Checks: 31, Failures: 0 25: Testing SBO Consistency Constraints (10700 - 10799). 25: 100%: Checks: 206, Failures: 0 25: Testing General Notes Consistency Constraints (10800 - 19999). 25: 100%: Checks: 92, Failures: 0 25: Testing Model Consistency Constraints (20000 - 29999). 25: 100%: Checks: 2290, Failures: 0 25: Testing L1 Compatibility Constraints (91000 - 91999). 25: 100%: Checks: 91, Failures: 0 25: Testing L2v1 Compatibility Constraints (92000 - 92999). 25: 100%: Checks: 38, Failures: 0 25: Testing L2v2 Compatibility Constraints (93000 - 93999). 25: 100%: Checks: 23, Failures: 0 25: Testing L2v3 Compatibility Constraints (94000 - 94999). 25: 100%: Checks: 22, Failures: 0 25: Testing L2v4 Compatibility Constraints (95000 - 95999). 25: 100%: Checks: 21, Failures: 0 25: Testing L3v1 Compatibility Constraints (96000 - 96999). 25: 100%: Checks: 31, Failures: 0 25: Testing L1 for New Compatibility Constraints (98000 - 98999). 25: 100%: Checks: 39, Failures: 0 25: Testing L2v1 for New Compatibility Constraints (98000 - 98999). 25: 100%: Checks: 39, Failures: 0 25: Testing L2v2 for New Compatibility Constraints (98000 - 98999). 25: 100%: Checks: 39, Failures: 0 25: Testing L2v3 for New Compatibility Constraints (98000 - 98999). 25: 100%: Checks: 39, Failures: 0 25: Testing L3v1 for New Compatibility Constraints (98000 - 98999). 25: 100%: Checks: 39, Failures: 0 25: Testing New Compatibility Constraints (98000 - 98999). 25: 100%: Checks: 39, Failures: 0 25: Testing Additional SBML Constraints (99100 - 99108). 25: 100%: Checks: 31, Failures: 0 25: Testing Additional SBML Constraints (99129 - 99199). 25: 100%: Checks: 56, Failures: 0 25: Testing Additional Math Constraints (99200 - 99299). 25: 100%: Checks: 144, Failures: 0 25: Testing Additional SBML Constraints (99300 - 99399). 25: 100%: Checks: 10, Failures: 0 25: Testing Additional Annotation Constraints (99400 - 99499). 25: 100%: Checks: 28, Failures: 0 25: Testing Additional Unit Constraints (99127 - 99128). 25: 100%: Checks: 36, Failures: 0 25: Testing Additional Unit Constraints (99500 - 99599). 25: 100%: Checks: 174, Failures: 0 25: Testing Additional SBO Constraints (99700 - 99799). 25: 100%: Checks: 30, Failures: 0 25: Testing Modeling Practice Constraints (80000 - 89999). 25: 100%: Checks: 56, Failures: 0 25/69 Test #25: test_sbml_validator_run ................ Passed 34.64 sec test 26 Start 26: test_sbml_xml_run 26: Test command: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test/test_sbml_xml 26: Test timeout computed to be: 3000 26: Running suite(s): XMLAttributes 26: CopyAndClone 26: XMLNamespaces 26: XMLTriple 26: XMLToken 26: XMLToken_newSetters 26: XMLNode 26: XMLNode_newSetters 26: XMLError 26: XMLErrorC 26: XMLErrorLog 26: XMLInputStream 26: XMLOutputStream 26: 26: XMLAttributesC 26: XMLExceptions 26: 100%: Checks: 129, Failures: 0, Errors: 0 26/69 Test #26: test_sbml_xml_run ...................... Passed 0.38 sec test 27 Start 27: test_csharp_bindings 27: Test command: /usr/bin/mono "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/TestRW.exe" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-2/" "-p" "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp" 27: Environment variables: 27: LD_LIBRARY_PATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp: 27: Test timeout computed to be: 3000 27: Testing LibSBML: 5.17.0 27: 27: ........................................................................................................................................................................................................................... 27: All tests passed. 27: 27/69 Test #27: test_csharp_bindings ................... Passed 0.39 sec test 28 Start 28: test_csharp_bindings_full 28: Test command: /usr/bin/mono "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/TestRunner.exe" "-d" "/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/test-data" "-l" "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp/libsbmlcsP.dll" "-w" "/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/csharp" "-p" "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp" 28: Environment variables: 28: LD_LIBRARY_PATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/csharp: 28: Test timeout computed to be: 3000 28: LibSBML C# Testrunner 28: ===================== 28: Running the tests with: 28: Data Directory: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/test-data 28: 28: ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28: ..................................... 28: 28: Total Number of Tests 1830, failures 0 28: 28: All tests passed. 28: 28/69 Test #28: test_csharp_bindings_full .............. Passed 0.09 sec test 29 Start 29: test_perl_binding 29: Test command: /usr/bin/perl "-I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl" "-I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl" "-MExtUtils::Command::MM" "-e" "test_harness(0)" "/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/*.t" 29: Environment variables: 29: LD_LIBRARY_PATH=/usr/lib/:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/../..: 29: Test timeout computed to be: 3000 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/01__LoadModule.t ................ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/02__CreateDocument.t ............ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/02__ReadFromFile.t .............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/02__ReadFromFileL3.t ............ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/02__WriteToFile.t ............... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/02__WriteToFileL3.t ............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/03__ChangeValues.t .............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/03__DowncastRule.t .............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/03__DowncastSBase.t ............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/03__DowncastSBaseL3.t ........... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/04__ListOf.t .................... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/04__ListOfL3.t .................. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__AlgebraicRule.t ............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__AssignmentRule.t ............ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__AssignmentRuleL3.t .......... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__Compartment.t ............... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__CompartmentL3.t ............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__CompartmentVolumeRule.t ..... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__Event.t ..................... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__EventAssignment.t ........... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__EventL3.t ................... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__Formula.t ................... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__FunctionDefinition.t ........ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__KineticLaw.t ................ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__KineticLawL3.t .............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__Model.t ..................... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__ModelL3.t ................... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__ModifierSpeciesReference.t .. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__Parameter.t ................. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__ParameterL3.t ............... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__ParameterRule.t ............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__RateRule.t .................. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__SBMLDocument.t .............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/05__SBMLDocumentVerbose.t ....... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/06__TestReadSBML.t .............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/06__TestReadSBMLL3.t ............ ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/06__TestWriteSBML.t ............. ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/06__TestWriteSBMLL3.t ........... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/07__TestCVTerms.t ............... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/07__TestModelHistory.t .......... ok 29: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/t/07__TestRDFAnnotation2.t ........ ok 29: All tests successful. 29: Files=41, Tests=3364, 8 wallclock secs ( 0.26 usr 0.05 sys + 6.54 cusr 0.36 csys = 7.21 CPU) 29: Result: PASS 29/69 Test #29: test_perl_binding ...................... Passed 8.37 sec test 30 Start 30: test_python_binding 30: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/test.py" "-p" "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python" "-b" "/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/test" 30: Test timeout computed to be: 3000 30: ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 30: ............................................................................................................................................................................................................................................................................................................................................................................................................... 30: ---------------------------------------------------------------------- 30: Ran 1819 tests in 0.588s 30: 30: OK 30/69 Test #30: test_python_binding .................... Passed 2.18 sec test 31 Start 31: test_python_printversion 31: Test command: /usr/bin/python3 "-c" "import libsbml; assert libsbml.getLibSBMLDottedVersion() == '5.17.0'" "-p" "/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python" "-b" "/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/test" 31: Environment variables: 31: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 31: Test timeout computed to be: 3000 31/69 Test #31: test_python_printversion ............... Passed 0.07 sec test 32 Start 32: test_python_addCVTerms 32: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/addCVTerms.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addCVTerms.out.xml" 32: Environment variables: 32: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 32: Test timeout computed to be: 3000 32/69 Test #32: test_python_addCVTerms ................. Passed 0.09 sec test 33 Start 33: test_python_addingEvidenceCodes_1 33: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/addingEvidenceCodes_1.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addingEvidenceCodes_1.out.xml" 33: Environment variables: 33: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 33: Test timeout computed to be: 3000 33/69 Test #33: test_python_addingEvidenceCodes_1 ...... Passed 0.08 sec test 34 Start 34: test_python_addingEvidenceCodes_2 34: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/addingEvidenceCodes_2.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addingEvidenceCodes_2.out.xml" 34: Environment variables: 34: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 34: Test timeout computed to be: 3000 34/69 Test #34: test_python_addingEvidenceCodes_2 ...... Passed 0.08 sec test 35 Start 35: test_python_addModelHistory 35: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/addModelHistory.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addModelHistory.out.xml" 35: Environment variables: 35: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 35: Test timeout computed to be: 3000 35: Status for addCreator: succeeded 35: Set created date: succeeded 35: Set modified date: succeeded 35: Set model history: unknown 35/69 Test #35: test_python_addModelHistory ............ Passed 0.09 sec test 36 Start 36: test_python_append_to_note 36: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/append_to_note.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekineticext.xml" "veq" "a new note" "append_to_note.out.xml" 36: Environment variables: 36: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 36: Test timeout computed to be: 3000 36: Body before change: 36: 36:

Some notes

36: 36: 36: Body after change: 36: 36:

Some notes

a new note 36/69 Test #36: test_python_append_to_note ............. Passed 0.10 sec test 37 Start 37: test_python_appendAnnotation 37: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/appendAnnotation.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "appendAnnotation.out.xml" 37: Environment variables: 37: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 37: Test timeout computed to be: 3000 37/69 Test #37: test_python_appendAnnotation ........... Passed 0.08 sec test 38 Start 38: test_python_convertSBML 38: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/convertSBML.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "convertSBML.out.xml" 38: Environment variables: 38: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 38: Test timeout computed to be: 3000 38: Attempting to convert Level 3 Version 1 model to Level 3 Version 2. 38: 38: Conversion completed. 38: 38/69 Test #38: test_python_convertSBML ................ Passed 0.10 sec test 39 Start 39: test_python_createExampleSBML 39: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/createExampleSBML.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "createExampleSBMLy.out.xml" 39: Environment variables: 39: PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python: 39: Test timeout computed to be: 3000 39: line 1: (99505 [Warning]) In situations where a mathematical expression contains literal numbers or parameters whose units have not been declared, it is not possible to verify accurately the consistency of the units in the expression. 39: The units of the

expression 'f(S1) * compartmentOne / t' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate.
39: 
39: Wrote file 'enzymaticreaction.xml'
39: Wrote file 'units.xml'
39: 
39: Notice: encountered 1 validation warning in model 'functionExample'.
39: 
39: Wrote file 'functiondef.xml'
39/69 Test #39: test_python_createExampleSBML ..........   Passed    0.11 sec
test 40
      Start 40: test_python_createSimpleModel

40: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/createSimpleModel.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "createSimpleModel.out.xml"
40: Environment variables: 
40:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
40: Test timeout computed to be: 3000
40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: k 40: s1 40: c1 40: 40: 40: 40: 40: 40: 40: 40: 
40/69 Test #40: test_python_createSimpleModel ..........   Passed    0.12 sec
test 41
      Start 41: test_python_echoSBML

41: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/echoSBML.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "echoSBML.out.xml"
41: Environment variables: 
41:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
41: Test timeout computed to be: 3000
41: [OK] Echoed /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml to echoSBML.out.xml
41/69 Test #41: test_python_echoSBML ...................   Passed    0.08 sec
test 42
      Start 42: test_python_evaluateCustomMath

42: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/evaluateCustomMath.py" "2*3+4" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
42: Environment variables: 
42:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
42: Test timeout computed to be: 3000
42: 2*3+4 = 10.0
42/69 Test #42: test_python_evaluateCustomMath .........   Passed    0.07 sec
test 43
      Start 43: test_python_getAllElementsWithNotes

43: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/getAllElementsWithNotes.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
43: Environment variables: 
43:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
43: Test timeout computed to be: 3000
43: 
43:             filename: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml
43:       read time (ms): 1.55419921875
43:     searching ......:
43:     search time (ms): 0.2626953125
43:  elements with notes: 0
43/69 Test #43: test_python_getAllElementsWithNotes ....   Passed    0.08 sec
test 44
      Start 44: test_python_inlineInitialAssignments

44: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/inlineInitialAssignments.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "inlineInitialAssignments.out.xml"
44: Environment variables: 
44:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
44: Test timeout computed to be: 3000
44/69 Test #44: test_python_inlineInitialAssignments ...   Passed    0.08 sec
test 45
      Start 45: test_python_printAnnotation

45: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/printAnnotation.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
45: Environment variables: 
45:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
45: Test timeout computed to be: 3000
45: filename: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml
45: 
45/69 Test #45: test_python_printAnnotation ............   Passed    0.08 sec
test 46
      Start 46: test_python_printMath

46: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/printMath.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
46: Environment variables: 
46:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
46: Test timeout computed to be: 3000
46: 
46: Reaction 1, formula: comp * (kon * E * S - koff * ES)
46: 
46: Reaction 2, formula: comp * kcat * ES
46: 
46: 
46: 
46/69 Test #46: test_python_printMath ..................   Passed    0.11 sec
test 47
      Start 47: test_python_printRegisteredPackages

47: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/printRegisteredPackages.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "printRegisteredPackages.out.xml"
47: Environment variables: 
47:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
47: Test timeout computed to be: 3000
47: This version of LibSBML: 5.17.0 includes: 
47: 
47: 	comp
47: 	fbc
47: 	groups
47: 	layout
47: 	render
47: 	multi
47: 	qual
47: 
47: 
47/69 Test #47: test_python_printRegisteredPackages ....   Passed    0.08 sec
test 48
      Start 48: test_python_printSBML

48: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/printSBML.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
48: Environment variables: 
48:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
48: Test timeout computed to be: 3000
48: 
48: File: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml (Level 3, version 1)
48:                  id: (empty)
48: functionDefinitions: 0
48:     unitDefinitions: 2
48:    compartmentTypes: 0
48:         specieTypes: 0
48:        compartments: 1
48:             species: 4
48:          parameters: 0
48:  initialAssignments: 0
48:               rules: 0
48:         constraints: 0
48:           reactions: 2
48:              events: 0
48: 
48: 
48/69 Test #48: test_python_printSBML ..................   Passed    0.08 sec
test 49
      Start 49: test_python_printsupported

49: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/printsupported.py"
49: Environment variables: 
49:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
49: Test timeout computed to be: 3000
49: Supported by LibSBML 5.17.0
49: 
49: 	SBML Level: 1 Version: 1
49: 	SBML Level: 1 Version: 2
49: 	SBML Level: 2 Version: 1
49: 	SBML Level: 2 Version: 2
49: 	SBML Level: 2 Version: 3
49: 	SBML Level: 2 Version: 4
49: 	SBML Level: 2 Version: 5
49: 	SBML Level: 3 Version: 1
49: 	SBML Level: 3 Version: 2
49: 
49/69 Test #49: test_python_printsupported .............   Passed    0.10 sec
test 50
      Start 50: test_python_printUnits

50: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/printUnits.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
50: Environment variables: 
50:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
50: Test timeout computed to be: 3000
50: Species 0: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0)
50: Species 1: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0)
50: Species 2: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0)
50: Species 3: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0)
50: Compartment 0: litre (exponent = 1, multiplier = 1, scale = 0)
50: Reaction 0: 
50: Kinetic Law: second (exponent = -1, multiplier = 1, scale = 0), mole (exponent = 1, multiplier = 1, scale = 0)
50:         undeclared units: no
50: Reaction 1: 
50: Kinetic Law: second (exponent = -1, multiplier = 1, scale = 0), mole (exponent = 1, multiplier = 1, scale = 0)
50:         undeclared units: no
50/69 Test #50: test_python_printUnits .................   Passed    0.08 sec
test 51
      Start 51: test_python_promoteParameters

51: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/promoteParameters.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "promoteParameters.out.xml"
51: Environment variables: 
51:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
51: Test timeout computed to be: 3000
51: [OK] wrote promoteParameters.out.xml
51/69 Test #51: test_python_promoteParameters ..........   Passed    0.08 sec
test 52
      Start 52: test_python_readSBML

52: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/readSBML.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
52: Environment variables: 
52:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
52: Test timeout computed to be: 3000
52: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/readSBML.py:57: DeprecationWarning: time.clock has been deprecated in Python 3.3 and will be removed from Python 3.8: use time.perf_counter or time.process_time instead
52:   current = time.clock()
52: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/readSBML.py:65: DeprecationWarning: time.clock has been deprecated in Python 3.3 and will be removed from Python 3.8: use time.perf_counter or time.process_time instead
52:   print("      read time (ms): " + str(time.clock() - current))
52: 
52:             filename: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml
52:            file size: 3930
52:       read time (ms): 0.001694000000000001
52:  validation error(s): 0
52: 
52/69 Test #52: test_python_readSBML ...................   Passed    0.10 sec
test 53
      Start 53: test_python_replaceOneFD

53: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/replaceOneFD.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/functiondef.xml" "f" "reaction_1" "replaceOneFD.out.xml"
53: Environment variables: 
53:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
53: Test timeout computed to be: 3000
53/69 Test #53: test_python_replaceOneFD ...............   Passed    0.07 sec
test 54
      Start 54: test_python_setIdFromNames

54: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/setIdFromNames.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "setIdFromNames.out.xml"
54: Environment variables: 
54:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
54: Test timeout computed to be: 3000
54: 
54:             filename: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml
54:       read time (ms): 1.57763671875
54:     rename time (ms): 0.3095703125
54:      write time (ms): 0.652587890625
54: 
54/69 Test #54: test_python_setIdFromNames .............   Passed    0.09 sec
test 55
      Start 55: test_python_unsetAnnotation

55: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/unsetAnnotation.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "unsetAnnotation.out.xml"
55: Environment variables: 
55:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
55: Test timeout computed to be: 3000
55/69 Test #55: test_python_unsetAnnotation ............   Passed    0.08 sec
test 56
      Start 56: test_python_unsetNotes

56: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/unsetNotes.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "unsetNotes.out.xml"
56: Environment variables: 
56:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
56: Test timeout computed to be: 3000
56/69 Test #56: test_python_unsetNotes .................   Passed    0.08 sec
test 57
      Start 57: test_python_validateSBML

57: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/validateSBML.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
57: Environment variables: 
57:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
57: Test timeout computed to be: 3000
57: ---------------------------------------------------------------------------
57:                  filename : /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml
57:          file size (byte) : 3930
57:            read time (ms) : 1.664639
57:         c-check time (ms) : 4.959106
57:       validation error(s) : 0
57:     (consistency error(s)): 0
57:     validation warning(s) : 0
57:   (consistency warning(s)): 0
57: ---------------------------------------------------------------------------
57: Validated 1 files, 1 valid files, 0 invalid files
57/69 Test #57: test_python_validateSBML ...............   Passed    0.09 sec
test 58
      Start 58: test_python_stringInput

58: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/stringInput.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml"
58: Environment variables: 
58:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
58: Test timeout computed to be: 3000
58: filename: /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml
58: 
58: 58: 58/69 Test #58: test_python_stringInput ................   Passed    0.08 sec
test 59
      Start 59: test_python_stripPackage

59: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/stripPackage.py" "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/fbc/fbc_example1.xml" "fbc" "stripPackage.out.xml"
59: Environment variables: 
59:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
59: Test timeout computed to be: 3000
59: [OK] stripped package 'fbc' from /builddir/build/BUILD/libSBML-5.17.0-Source/examples/sample-models/fbc/fbc_example1.xml to stripPackage.out.xml
59/69 Test #59: test_python_stripPackage ...............   Passed    0.09 sec
test 60
      Start 60: test_python_fbc_fbc_example1

60: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/fbc/fbc_example1.py"
60: Environment variables: 
60:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
60: Test timeout computed to be: 3000
60/69 Test #60: test_python_fbc_fbc_example1 ...........   Passed    0.08 sec
test 61
      Start 61: test_python_groups_groups_example1

61: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/groups/groups_example1.py"
61: Environment variables: 
61:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
61: Test timeout computed to be: 3000
61/69 Test #61: test_python_groups_groups_example1 .....   Passed    0.08 sec
test 62
      Start 62: test_python_layout_example1_L3

62: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/layout/example1-L3.py"
62: Environment variables: 
62:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
62: Test timeout computed to be: 3000
62/69 Test #62: test_python_layout_example1_L3 .........   Passed    0.09 sec
test 63
      Start 63: test_python_layout_example1

63: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/layout/example1.py"
63: Environment variables: 
63:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
63: Test timeout computed to be: 3000
63/69 Test #63: test_python_layout_example1 ............   Passed    0.08 sec
test 64
      Start 64: test_python_multi_multi_example1

64: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/multi/multi_example1.py"
64: Environment variables: 
64:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
64: Test timeout computed to be: 3000
64/69 Test #64: test_python_multi_multi_example1 .......   Passed    0.07 sec
test 65
      Start 65: test_python_multi_multi_example2

65: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/multi/multi_example2.py"
65: Environment variables: 
65:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
65: Test timeout computed to be: 3000
65/69 Test #65: test_python_multi_multi_example2 .......   Passed    0.07 sec
test 66
      Start 66: test_python_multi_multi_example3

66: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/multi/multi_example3.py"
66: Environment variables: 
66:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
66: Test timeout computed to be: 3000
66/69 Test #66: test_python_multi_multi_example3 .......   Passed    0.07 sec
test 67
      Start 67: test_python_multi_printMulti

67: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/multi/printMulti.py"
67: Environment variables: 
67:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
67: Test timeout computed to be: 3000
67: usage: printMulti sbml-file
67/69 Test #67: test_python_multi_printMulti ...........   Passed    0.07 sec
test 68
      Start 68: test_python_qual_qual_example1

68: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.17.0-Source/examples/python/qual/qual_example1.py"
68: Environment variables: 
68:  PYTHONPATH=/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python:
68: Test timeout computed to be: 3000
68/69 Test #68: test_python_qual_qual_example1 .........   Passed    0.07 sec
test 69
      Start 69: test_r_binding

69: Test command: /usr/bin/R "--slave" "-e" ".libPaths('temp');library(libSBML);cat(getLibSBMLDottedVersion() == '5.17.0')"
69: Test timeout computed to be: 3000
69: 
69: Attaching package: 'libSBML'
69: 
69: The following object is masked from 'package:base':
69: 
69:     flush
69: 
69: TRUE
69/69 Test #69: test_r_binding .........................   Passed    1.04 sec

The following tests passed:
	test_comp_extensions_run
	test_comp_sbase_run
	test_comp_util_run
	test_comp_validator_run
	test_sbml_package_fbc_run
	test_fbc_validator_run
	test_extension_package_groups_run
	test_groups_validator_run
	test_sbml_package_layout_run
	test_layout_validator_run
	test_sbml_package_multi_run
	test_multi_validator_run
	test_extension_package_qual_run
	test_sbml_package_qual_run
	test_qual_validator_run
	test_sbml_package_render_run
	test_render_validator_run
	test_sbml_annotation_run
	test_sbml_conversion_run
	test_sbml_extension_run
	test_sbml_math_run
	test_sbml_sbml_run
	test_sbml_units_run
	test_sbml_util_run
	test_sbml_validator_run
	test_sbml_xml_run
	test_csharp_bindings
	test_csharp_bindings_full
	test_perl_binding
	test_python_binding
	test_python_printversion
	test_python_addCVTerms
	test_python_addingEvidenceCodes_1
	test_python_addingEvidenceCodes_2
	test_python_addModelHistory
	test_python_append_to_note
	test_python_appendAnnotation
	test_python_convertSBML
	test_python_createExampleSBML
	test_python_createSimpleModel
	test_python_echoSBML
	test_python_evaluateCustomMath
	test_python_getAllElementsWithNotes
	test_python_inlineInitialAssignments
	test_python_printAnnotation
	test_python_printMath
	test_python_printRegisteredPackages
	test_python_printSBML
	test_python_printsupported
	test_python_printUnits
	test_python_promoteParameters
	test_python_readSBML
	test_python_replaceOneFD
	test_python_setIdFromNames
	test_python_unsetAnnotation
	test_python_unsetNotes
	test_python_validateSBML
	test_python_stringInput
	test_python_stripPackage
	test_python_fbc_fbc_example1
	test_python_groups_groups_example1
	test_python_layout_example1_L3
	test_python_layout_example1
	test_python_multi_multi_example1
	test_python_multi_multi_example2
	test_python_multi_multi_example3
	test_python_multi_printMulti
	test_python_qual_qual_example1
	test_r_binding

100% tests passed, 0 tests failed out of 69

Total Test time (real) =  88.74 sec
~/build/BUILD/libSBML-5.17.0-Source
+ popd
+ exit 0
Processing files: libsbml-5.17.0-11.fc30.ppc64le
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.BIFT06
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ DOCDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml
+ cp -pr AUTHORS.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml
+ cp -pr README-extension.txt README.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml
+ cp -pr NEWS.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml
+ cp -pr OLD_NEWS.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/doc/libsbml
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ZmALqX
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ exit 0
Provides: libsbml = 5.17.0-11.fc30 libsbml(ppc-64) = 5.17.0-11.fc30 libsbml.so.5()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: libsbml-devel-5.17.0-11.fc30.ppc64le
Provides: libsbml-devel = 5.17.0-11.fc30 libsbml-devel(ppc-64) = 5.17.0-11.fc30 libsbml-static = 5.17.0-11.fc30 pkgconfig(libsbml) = 5.17.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config libsbml.so.5()(64bit) pkgconfig(libxml-2.0) >= 2.6.22
Processing files: python3-libsbml-5.17.0-11.fc30.ppc64le
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.fy5MJO
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ exit 0
Provides: python3-libsbml = 5.17.0-11.fc30 python3-libsbml(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libpython3.7m.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) python(abi) = 3.7 rtld(GNU_HASH)
Processing files: perl-LibSBML-5.17.0-11.fc30.ppc64le
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ASFEbG
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ exit 0
Provides: perl(LibSBML) perl(LibSBML::ASTBase) perl(LibSBML::ASTBasePlugin) perl(LibSBML::ASTNode) perl(LibSBML::ASTNodeList) perl(LibSBML::AlgebraicRule) perl(LibSBML::AssignmentRule) perl(LibSBML::Association) perl(LibSBML::BindingSiteSpeciesType) perl(LibSBML::BoundingBox) perl(LibSBML::CVTerm) perl(LibSBML::CVTermList) perl(LibSBML::CobraToFbcConverter) perl(LibSBML::ColorDefinition) perl(LibSBML::CompBase) perl(LibSBML::CompExtension) perl(LibSBML::CompFlatteningConverter) perl(LibSBML::CompModelPlugin) perl(LibSBML::CompPkgNamespaces) perl(LibSBML::CompSBMLDocumentPlugin) perl(LibSBML::CompSBasePlugin) perl(LibSBML::Compartment) perl(LibSBML::CompartmentGlyph) perl(LibSBML::CompartmentReference) perl(LibSBML::CompartmentType) perl(LibSBML::Constraint) perl(LibSBML::ConversionOption) perl(LibSBML::ConversionProperties) perl(LibSBML::CubicBezier) perl(LibSBML::Curve) perl(LibSBML::Date) perl(LibSBML::DateList) perl(LibSBML::DefaultTerm) perl(LibSBML::DefaultValues) perl(LibSBML::Delay) perl(LibSBML::Deletion) perl(LibSBML::Dimensions) perl(LibSBML::ElementFilter) perl(LibSBML::Ellipse) perl(LibSBML::Event) perl(LibSBML::EventAssignment) perl(LibSBML::ExternalModelDefinition) perl(LibSBML::FbcAnd) perl(LibSBML::FbcAssociation) perl(LibSBML::FbcExtension) perl(LibSBML::FbcModelPlugin) perl(LibSBML::FbcOr) perl(LibSBML::FbcPkgNamespaces) perl(LibSBML::FbcReactionPlugin) perl(LibSBML::FbcSBMLDocumentPlugin) perl(LibSBML::FbcSpeciesPlugin) perl(LibSBML::FbcToCobraConverter) perl(LibSBML::FbcV1ToV2Converter) perl(LibSBML::FbcV2ToV1Converter) perl(LibSBML::FluxBound) perl(LibSBML::FluxObjective) perl(LibSBML::FunctionDefinition) perl(LibSBML::FunctionTerm) perl(LibSBML::GeneAssociation) perl(LibSBML::GeneProduct) perl(LibSBML::GeneProductAssociation) perl(LibSBML::GeneProductRef) perl(LibSBML::GeneralGlyph) perl(LibSBML::GlobalRenderInformation) perl(LibSBML::GlobalStyle) perl(LibSBML::GradientBase) perl(LibSBML::GradientStop) perl(LibSBML::GraphicalObject) perl(LibSBML::GraphicalPrimitive1D) perl(LibSBML::GraphicalPrimitive2D) perl(LibSBML::Group) perl(LibSBML::GroupsExtension) perl(LibSBML::GroupsModelPlugin) perl(LibSBML::GroupsPkgNamespaces) perl(LibSBML::ISBMLExtensionNamespaces) perl(LibSBML::IdList) perl(LibSBML::IdentifierTransformer) perl(LibSBML::Image) perl(LibSBML::InSpeciesTypeBond) perl(LibSBML::InitialAssignment) perl(LibSBML::Input) perl(LibSBML::IntraSpeciesReaction) perl(LibSBML::KineticLaw) perl(LibSBML::L3ParserSettings) perl(LibSBML::Layout) perl(LibSBML::LayoutExtension) perl(LibSBML::LayoutModelPlugin) perl(LibSBML::LayoutPkgNamespaces) perl(LibSBML::LayoutSpeciesReferencePlugin) perl(LibSBML::LineEnding) perl(LibSBML::LineSegment) perl(LibSBML::LinearGradient) perl(LibSBML::ListOf) perl(LibSBML::ListOfColorDefinitions) perl(LibSBML::ListOfCompartmentGlyphs) perl(LibSBML::ListOfCompartmentReferences) perl(LibSBML::ListOfCompartmentTypes) perl(LibSBML::ListOfCompartments) perl(LibSBML::ListOfConstraints) perl(LibSBML::ListOfCurveElements) perl(LibSBML::ListOfDeletions) perl(LibSBML::ListOfDrawables) perl(LibSBML::ListOfEventAssignments) perl(LibSBML::ListOfEvents) perl(LibSBML::ListOfExternalModelDefinitions) perl(LibSBML::ListOfFbcAssociations) perl(LibSBML::ListOfFluxBounds) perl(LibSBML::ListOfFluxObjectives) perl(LibSBML::ListOfFunctionDefinitions) perl(LibSBML::ListOfFunctionTerms) perl(LibSBML::ListOfGeneAssociations) perl(LibSBML::ListOfGeneProducts) perl(LibSBML::ListOfGlobalRenderInformation) perl(LibSBML::ListOfGlobalStyles) perl(LibSBML::ListOfGradientDefinitions) perl(LibSBML::ListOfGradientStops) perl(LibSBML::ListOfGraphicalObjects) perl(LibSBML::ListOfGroups) perl(LibSBML::ListOfInSpeciesTypeBonds) perl(LibSBML::ListOfInitialAssignments) perl(LibSBML::ListOfInputs) perl(LibSBML::ListOfLayouts) perl(LibSBML::ListOfLineEndings) perl(LibSBML::ListOfLineSegments) perl(LibSBML::ListOfLocalParameters) perl(LibSBML::ListOfLocalRenderInformation) perl(LibSBML::ListOfLocalStyles) perl(LibSBML::ListOfMembers) perl(LibSBML::ListOfModelDefinitions) perl(LibSBML::ListOfMultiSpeciesTypes) perl(LibSBML::ListOfObjectives) perl(LibSBML::ListOfOutputs) perl(LibSBML::ListOfOutwardBindingSites) perl(LibSBML::ListOfParameters) perl(LibSBML::ListOfPorts) perl(LibSBML::ListOfPossibleSpeciesFeatureValues) perl(LibSBML::ListOfQualitativeSpecies) perl(LibSBML::ListOfReactionGlyphs) perl(LibSBML::ListOfReactions) perl(LibSBML::ListOfReferenceGlyphs) perl(LibSBML::ListOfReplacedElements) perl(LibSBML::ListOfRules) perl(LibSBML::ListOfSpecies) perl(LibSBML::ListOfSpeciesFeatureTypes) perl(LibSBML::ListOfSpeciesFeatureValues) perl(LibSBML::ListOfSpeciesFeatures) perl(LibSBML::ListOfSpeciesGlyphs) perl(LibSBML::ListOfSpeciesReferenceGlyphs) perl(LibSBML::ListOfSpeciesReferences) perl(LibSBML::ListOfSpeciesTypeComponentIndexes) perl(LibSBML::ListOfSpeciesTypeComponentMapInProducts) perl(LibSBML::ListOfSpeciesTypeInstances) perl(LibSBML::ListOfSpeciesTypes) perl(LibSBML::ListOfSubmodels) perl(LibSBML::ListOfTextGlyphs) perl(LibSBML::ListOfTransitions) perl(LibSBML::ListOfUnitDefinitions) perl(LibSBML::ListOfUnits) perl(LibSBML::LocalParameter) perl(LibSBML::LocalRenderInformation) perl(LibSBML::LocalStyle) perl(LibSBML::MathFilter) perl(LibSBML::MathML) perl(LibSBML::Member) perl(LibSBML::Model) perl(LibSBML::ModelCreator) perl(LibSBML::ModelCreatorList) perl(LibSBML::ModelDefinition) perl(LibSBML::ModelHistory) perl(LibSBML::ModifierSpeciesReference) perl(LibSBML::MultiASTPlugin) perl(LibSBML::MultiCompartmentPlugin) perl(LibSBML::MultiExtension) perl(LibSBML::MultiListOfReactionsPlugin) perl(LibSBML::MultiModelPlugin) perl(LibSBML::MultiPkgNamespaces) perl(LibSBML::MultiSBMLDocumentPlugin) perl(LibSBML::MultiSimpleSpeciesReferencePlugin) perl(LibSBML::MultiSpeciesPlugin) perl(LibSBML::MultiSpeciesReferencePlugin) perl(LibSBML::MultiSpeciesType) perl(LibSBML::OFStream) perl(LibSBML::OStream) perl(LibSBML::OStringStream) perl(LibSBML::Objective) perl(LibSBML::Output) perl(LibSBML::OutwardBindingSite) perl(LibSBML::Parameter) perl(LibSBML::Point) perl(LibSBML::Polygon) perl(LibSBML::Port) perl(LibSBML::PossibleSpeciesFeatureValue) perl(LibSBML::Priority) perl(LibSBML::QualExtension) perl(LibSBML::QualModelPlugin) perl(LibSBML::QualPkgNamespaces) perl(LibSBML::QualitativeSpecies) perl(LibSBML::RDFAnnotationParser) perl(LibSBML::RadialGradient) perl(LibSBML::RateRule) perl(LibSBML::Reaction) perl(LibSBML::ReactionGlyph) perl(LibSBML::Rectangle) perl(LibSBML::ReferenceGlyph) perl(LibSBML::RelAbsVector) perl(LibSBML::RenderCubicBezier) perl(LibSBML::RenderCurve) perl(LibSBML::RenderExtension) perl(LibSBML::RenderGraphicalObjectPlugin) perl(LibSBML::RenderGroup) perl(LibSBML::RenderInformationBase) perl(LibSBML::RenderLayoutPlugin) perl(LibSBML::RenderListOfLayoutsPlugin) perl(LibSBML::RenderPkgNamespaces) perl(LibSBML::RenderPoint) perl(LibSBML::ReplacedBy) perl(LibSBML::ReplacedElement) perl(LibSBML::Replacing) perl(LibSBML::Rule) perl(LibSBML::SBMLConstructorException) perl(LibSBML::SBMLConverter) perl(LibSBML::SBMLConverterRegistry) perl(LibSBML::SBMLDocument) perl(LibSBML::SBMLDocumentPlugin) perl(LibSBML::SBMLError) perl(LibSBML::SBMLErrorLog) perl(LibSBML::SBMLExtension) perl(LibSBML::SBMLExtensionException) perl(LibSBML::SBMLExtensionRegistry) perl(LibSBML::SBMLExternalValidator) perl(LibSBML::SBMLFileResolver) perl(LibSBML::SBMLFunctionDefinitionConverter) perl(LibSBML::SBMLIdConverter) perl(LibSBML::SBMLInferUnitsConverter) perl(LibSBML::SBMLInitialAssignmentConverter) perl(LibSBML::SBMLLevel1Version1Converter) perl(LibSBML::SBMLLevelVersionConverter) perl(LibSBML::SBMLLocalParameterConverter) perl(LibSBML::SBMLNamespaces) perl(LibSBML::SBMLNamespacesList) perl(LibSBML::SBMLReactionConverter) perl(LibSBML::SBMLReader) perl(LibSBML::SBMLResolver) perl(LibSBML::SBMLResolverRegistry) perl(LibSBML::SBMLRuleConverter) perl(LibSBML::SBMLStripPackageConverter) perl(LibSBML::SBMLTransforms) perl(LibSBML::SBMLUnitsConverter) perl(LibSBML::SBMLUri) perl(LibSBML::SBMLValidator) perl(LibSBML::SBMLWriter) perl(LibSBML::SBO) perl(LibSBML::SBase) perl(LibSBML::SBaseExtensionPoint) perl(LibSBML::SBaseList) perl(LibSBML::SBasePlugin) perl(LibSBML::SBaseRef) perl(LibSBML::SimpleSpeciesReference) perl(LibSBML::Species) perl(LibSBML::SpeciesFeature) perl(LibSBML::SpeciesFeatureType) perl(LibSBML::SpeciesFeatureValue) perl(LibSBML::SpeciesGlyph) perl(LibSBML::SpeciesReference) perl(LibSBML::SpeciesReferenceGlyph) perl(LibSBML::SpeciesType) perl(LibSBML::SpeciesTypeComponentIndex) perl(LibSBML::SpeciesTypeComponentMapInProduct) perl(LibSBML::SpeciesTypeInstance) perl(LibSBML::StoichiometryMath) perl(LibSBML::StringSet) perl(LibSBML::Style) perl(LibSBML::SubListOfSpeciesFeatures) perl(LibSBML::Submodel) perl(LibSBML::SyntaxChecker) perl(LibSBML::Text) perl(LibSBML::TextGlyph) perl(LibSBML::Transformation) perl(LibSBML::Transformation2D) perl(LibSBML::Transition) perl(LibSBML::Trigger) perl(LibSBML::Unit) perl(LibSBML::UnitDefinition) perl(LibSBML::XMLAttributes) perl(LibSBML::XMLConstructorException) perl(LibSBML::XMLError) perl(LibSBML::XMLErrorLog) perl(LibSBML::XMLInputStream) perl(LibSBML::XMLNamespaces) perl(LibSBML::XMLNode) perl(LibSBML::XMLOutputStream) perl(LibSBML::XMLOwningOutputFileStream) perl(LibSBML::XMLOwningOutputStringStream) perl(LibSBML::XMLToken) perl(LibSBML::XMLTriple) perl(LibSBML::double_array) perl(LibSBML::int_array) perl(LibSBMLc) perl-LibSBML = 5.17.0-11.fc30 perl-LibSBML(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libperl.so.5.28()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) perl(DynaLoader) perl(Exporter) perl(base) perl(overload) perl(vars) rtld(GNU_HASH)
Processing files: ruby-SBML-5.17.0-11.fc30.ppc64le
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.wlcmSx
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ exit 0
Provides: libSBML.so()(64bit) ruby(SBML) = 5.17.0 ruby-SBML = 5.17.0-11.fc30 ruby-SBML(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libruby.so.2.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: R-libSBML-5.17.0-11.fc30.ppc64le
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Uc0PCp
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ exit 0
Provides: R-libSBML = 5.17.0-11.fc30 R-libSBML(ppc-64) = 5.17.0-11.fc30 libSBML.so()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libR.so()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: libsbml-sharp-5.17.0-11.fc30.ppc64le
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.A8A3th
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le/usr/share/licenses/libsbml
+ exit 0
Provides: libsbml-sharp = 5.17.0-11.fc30 libsbml-sharp(ppc-64) = 5.17.0-11.fc30 libsbmlcs.so()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: libsbml-debugsource-5.17.0-11.fc30.ppc64le
Provides: libsbml-debugsource = 5.17.0-11.fc30 libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: libsbml-debuginfo-5.17.0-11.fc30.ppc64le
Provides: debuginfo(build-id) = 294bf95f9bef8c49c13fd743f77c5d85980f47af libsbml-debuginfo = 5.17.0-11.fc30 libsbml-debuginfo(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Processing files: python3-libsbml-debuginfo-5.17.0-11.fc30.ppc64le
Provides: debuginfo(build-id) = 57e321a303096078e0b78241cd9b6ddfb9bedd2c python3-libsbml-debuginfo = 5.17.0-11.fc30 python3-libsbml-debuginfo(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Processing files: perl-LibSBML-debuginfo-5.17.0-11.fc30.ppc64le
Provides: debuginfo(build-id) = 2b8dd218f220c96659e8a54d56b3bec8fa3275c5 perl-LibSBML-debuginfo = 5.17.0-11.fc30 perl-LibSBML-debuginfo(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Processing files: ruby-SBML-debuginfo-5.17.0-11.fc30.ppc64le
Provides: debuginfo(build-id) = b80c73f72d4ad4d2214c66d3074cc855ca72f4fa ruby-SBML-debuginfo = 5.17.0-11.fc30 ruby-SBML-debuginfo(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Processing files: R-libSBML-debuginfo-5.17.0-11.fc30.ppc64le
Provides: R-libSBML-debuginfo = 5.17.0-11.fc30 R-libSBML-debuginfo(ppc-64) = 5.17.0-11.fc30 debuginfo(build-id) = ffac6eb393eff826a4def82cbcba117f21cf326f
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Processing files: libsbml-sharp-debuginfo-5.17.0-11.fc30.ppc64le
Provides: debuginfo(build-id) = 50c6e087eeab8c5de16d36290fe8f9248f86fa64 libsbml-sharp-debuginfo = 5.17.0-11.fc30 libsbml-sharp-debuginfo(ppc-64) = 5.17.0-11.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsbml-debugsource(ppc-64) = 5.17.0-11.fc30
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le
Wrote: /builddir/build/RPMS/libsbml-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/libsbml-devel-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/python3-libsbml-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/perl-LibSBML-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/ruby-SBML-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/R-libSBML-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/libsbml-sharp-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/libsbml-debugsource-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/libsbml-debuginfo-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/python3-libsbml-debuginfo-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/perl-LibSBML-debuginfo-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/ruby-SBML-debuginfo-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/R-libSBML-debuginfo-5.17.0-11.fc30.ppc64le.rpm
Wrote: /builddir/build/RPMS/libsbml-sharp-debuginfo-5.17.0-11.fc30.ppc64le.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.qahMBO
+ umask 022
+ cd /builddir/build/BUILD
+ cd libSBML-5.17.0-Source
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/libsbml-5.17.0-11.fc30.ppc64le
+ exit 0
Finish: rpmbuild libsbml-5.17.0-11.fc30.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/820896-fedora-rawhide-ppc64le-1541659979.844061/root/var/log/dnf.log
/var/lib/mock/820896-fedora-rawhide-ppc64le-1541659979.844061/root/var/log/dnf.librepo.log
/var/lib/mock/820896-fedora-rawhide-ppc64le-1541659979.844061/root/var/log/dnf.rpm.log
Finish: build phase for libsbml-5.17.0-11.fc30.src.rpm
INFO: Done(/var/lib/copr-rpmbuild/results/libsbml-5.17.0-11.fc30.src.rpm) Config(child) 45 minutes 24 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run