Mock Version: 1.4.13
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/bionetgen.spec'], chrootPath='/var/lib/mock/856965-fedora-rawhide-x86_64-1549838648.963038/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fe9f09485f8>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.e1k_ndcy:/etc/resolv.conf']unshare_net=TrueprintOutput=True)
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '3105296bdd0247c8bca59a9df08957b9', '-D', '/var/lib/mock/856965-fedora-rawhide-x86_64-1549838648.963038/root', '-a', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.e1k_ndcy:/etc/resolv.conf', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '-u', 'mockbuild', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/bionetgen.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
BUILDSTDERR: sh: /usr/bin/perl: No such file or directory
BUILDSTDERR: sh: /usr/bin/perl: No such file or directory
BUILDSTDERR: sh: /usr/bin/perl: No such file or directory
BUILDSTDERR: sh: /usr/bin/perl: No such file or directory
BUILDSTDERR: sh: /usr/bin/perl: No such file or directory
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/bionetgen-2.4.0-4.fc30.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/bionetgen.spec'], chrootPath='/var/lib/mock/856965-fedora-rawhide-x86_64-1549838648.963038/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fe9f09485f8>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.e1k_ndcy:/etc/resolv.conf']unshare_net=TrueprintOutput=True)
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b0e6fa14d9824117b68b3a48cf45d363', '-D', '/var/lib/mock/856965-fedora-rawhide-x86_64-1549838648.963038/root', '-a', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.e1k_ndcy:/etc/resolv.conf', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '-u', 'mockbuild', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/bionetgen.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.lpbGks
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf bionetgen-BioNetGen-2.4.0
+ /usr/bin/gzip -dc /builddir/build/SOURCES/bionetgen-BioNetGen-2.4.0.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd bionetgen-BioNetGen-2.4.0
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/bin/cat /builddir/build/SOURCES/bionetgen-network-solver.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch
+ rm bng2/libsource/Mathutils.tar.gz bng2/libsource/cvode-2.6.0.tar.gz bng2/libsource/gsl-1.9.tar.gz bng2/libsource/muparser_v2_2_4.tar.gz bng2/libsource/muparser_v2_2_4.zip
+ pushd bng2/Network3
~/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3 ~/build/BUILD/bionetgen-BioNetGen-2.4.0
+ sed -i 's/AC_PROG_LIBTOOL/AM_PROG_AR\nLT_INIT/' configure.ac
+ sed -i 's/cvode-.*//; s/muparser_.*//' configure.ac Makefile.am
+ sed -i -r 's/(run_network_LDADD =).*/\1 libmathutils.la -lmuparser -lsundials_nvecserial -lsundials_cvode/' src/Makefile.am
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PGFsWm
+ umask 022
+ cd /builddir/build/BUILD
+ cd bionetgen-BioNetGen-2.4.0
+ pushd bng2/Network3
~/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3 ~/build/BUILD/bionetgen-BioNetGen-2.4.0
+ autoreconf -iv
BUILDSTDERR: autoreconf: Entering directory `.'
BUILDSTDERR: autoreconf: configure.ac: not using Gettext
BUILDSTDERR: autoreconf: running: aclocal -I m4
BUILDSTDERR: aclocal: warning: couldn't open directory 'm4': No such file or directory
BUILDSTDERR: autoreconf: configure.ac: tracing
BUILDSTDERR: autoreconf: running: libtoolize --copy
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
BUILDSTDERR: autoreconf: running: /usr/bin/autoconf
BUILDSTDERR: autoreconf: running: /usr/bin/autoheader
BUILDSTDERR: autoreconf: running: automake --add-missing --copy --no-force
BUILDSTDERR: configure.ac:12: installing './ar-lib'
BUILDSTDERR: configure.ac:12: installing './compile'
BUILDSTDERR: configure.ac:16: installing './config.guess'
BUILDSTDERR: configure.ac:16: installing './config.sub'
BUILDSTDERR: configure.ac:6: installing './install-sh'
BUILDSTDERR: configure.ac:6: installing './missing'
BUILDSTDERR: src/Makefile.am: installing './depcomp'
BUILDSTDERR: autoreconf: Leaving directory `.'
+ . /etc/profile.d/modules.sh
BUILDSTDERR: ++ '[' -z '' ']'
BUILDSTDERR: ++ '[' -z /usr/share/modulefiles ']'
BUILDSTDERR: ++ PS_CMD=/usr/bin/ps
BUILDSTDERR: ++ '[' '!' -x /usr/bin/ps ']'
BUILDSTDERR: ++ EXPR_CMD=/usr/bin/expr
BUILDSTDERR: ++ '[' '!' -x /usr/bin/expr ']'
BUILDSTDERR: ++ BASENAME_CMD=/usr/bin/basename
BUILDSTDERR: ++ '[' '!' -x /usr/bin/basename ']'
BUILDSTDERR: +++ /usr/bin/ps -p 66 -ocomm=
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/expr sh : '-*\(.*\)'
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/basename sh
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: ++ '[' -f /usr/share/lmod/lmod/init/sh ']'
BUILDSTDERR: ++ . /usr/share/lmod/lmod/init/sh
BUILDSTDERR: +++ LMOD_PKG=/usr/share/lmod/lmod
BUILDSTDERR: +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
BUILDSTDERR: +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
BUILDSTDERR: +++ MODULESHOME=/usr/share/lmod/lmod
BUILDSTDERR: +++ export LMOD_CMD
BUILDSTDERR: +++ export LMOD_PKG
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: +++ export MODULESHOME
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ module load mpi/openmpi-x86_64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man::;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
BUILDSTDERR: ++ export LD_LIBRARY_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ LOADEDMODULES=mpi/openmpi-x86_64
BUILDSTDERR: ++ export LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man::
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MODULEPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ MPI_BIN=/usr/lib64/openmpi/bin
BUILDSTDERR: ++ export MPI_BIN
BUILDSTDERR: ++ MPI_COMPILER=openmpi-x86_64
BUILDSTDERR: ++ export MPI_COMPILER
BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ MPI_HOME=/usr/lib64/openmpi
BUILDSTDERR: ++ export MPI_HOME
BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/openmpi-x86_64
BUILDSTDERR: ++ export MPI_INCLUDE
BUILDSTDERR: ++ MPI_LIB=/usr/lib64/openmpi/lib
BUILDSTDERR: ++ export MPI_LIB
BUILDSTDERR: ++ MPI_MAN=/usr/share/man/openmpi-x86_64
BUILDSTDERR: ++ export MPI_MAN
BUILDSTDERR: ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ MPI_SUFFIX=_openmpi
BUILDSTDERR: ++ export MPI_SUFFIX
BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/openmpi-x86_64
BUILDSTDERR: ++ export MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
BUILDSTDERR: ++ export _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ warnings='-Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized'
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized'
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ '[' 1 = 1 ']'
BUILDSTDERR: +++ dirname ./configure
BUILDSTDERR: ++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
BUILDSTDERR: ++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
BUILDSTDERR: ++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
BUILDSTDERR: ++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
BUILDSTDERR: ++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
BUILDSTDERR: ++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports the include directive... yes (GNU style)
checking for x86_64-redhat-linux-gnu-gcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking for x86_64-redhat-linux-gnu-ar... no
checking for x86_64-redhat-linux-gnu-lib... no
checking for x86_64-redhat-linux-gnu-link... no
checking for ar... ar
checking the archiver (ar) interface... ar
checking for x86_64-redhat-linux-gnu-ar... ar
checking the archiver (ar) interface... (cached) ar
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for x86_64-redhat-linux-gnu-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-redhat-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-redhat-linux-gnu-ar... (cached) ar
checking for archiver @FILE support... @
checking for x86_64-redhat-linux-gnu-strip... no
checking for strip... strip
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for x86_64-redhat-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for x86_64-redhat-linux-gnu-g++... no
checking for x86_64-redhat-linux-gnu-c++... no
checking for x86_64-redhat-linux-gnu-gpp... no
checking for x86_64-redhat-linux-gnu-aCC... no
checking for x86_64-redhat-linux-gnu-CC... no
checking for x86_64-redhat-linux-gnu-cxx... no
checking for x86_64-redhat-linux-gnu-cc++... no
checking for x86_64-redhat-linux-gnu-cl.exe... no
checking for x86_64-redhat-linux-gnu-FCC... no
checking for x86_64-redhat-linux-gnu-KCC... no
checking for x86_64-redhat-linux-gnu-RCC... no
checking for x86_64-redhat-linux-gnu-xlC_r... no
checking for x86_64-redhat-linux-gnu-xlC... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for gawk... (cached) gawk
checking for x86_64-redhat-linux-gnu-gcc... gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking dependency style of gcc... (cached) none
checking how to run the C preprocessor... gcc -E
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for inline... inline
checking for size_t... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for floor... no
checking for pow... no
checking for rint... no
checking for sqrt... no
checking for strchr... yes
checking for strdup... yes
checking for strpbrk... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
+ /usr/bin/make -O -j2 -C src
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o run_network-network.o `test -f 'network.cpp' || echo './'`network.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o run_network-network3.o `test -f 'network3.cpp' || echo './'`network3.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o util/run_network-misc.o `test -f 'util/misc.cpp' || echo './'`util/misc.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/run_network-function.o `test -f 'model/function.cpp' || echo './'`model/function.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/run_network-observable.o `test -f 'model/observable.cpp' || echo './'`model/observable.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/run_network-rateExpression.o `test -f 'model/rateExpression.cpp' || echo './'`model/rateExpression.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o run_network-run_network.o `test -f 'run_network.cpp' || echo './'`run_network.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/run_network-simpleSpecies.o `test -f 'model/simpleSpecies.cpp' || echo './'`model/simpleSpecies.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/run_network-reaction.o `test -f 'model/reaction.cpp' || echo './'`model/reaction.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/rateExpressions/run_network-rateElementary.o `test -f 'model/rateExpressions/rateElementary.cpp' || echo './'`model/rateExpressions/rateElementary.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/rateExpressions/run_network-rateMM.o `test -f 'model/rateExpressions/rateMM.cpp' || echo './'`model/rateExpressions/rateMM.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/rateExpressions/run_network-rateHill.o `test -f 'model/rateExpressions/rateHill.cpp' || echo './'`model/rateExpressions/rateHill.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/rateExpressions/run_network-rateMuParser.o `test -f 'model/rateExpressions/rateMuParser.cpp' || echo './'`model/rateExpressions/rateMuParser.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/rateExpressions/run_network-rateSaturation.o `test -f 'model/rateExpressions/rateSaturation.cpp' || echo './'`model/rateExpressions/rateSaturation.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/reactions/run_network-elementaryRxn.o `test -f 'model/reactions/elementaryRxn.cpp' || echo './'`model/reactions/elementaryRxn.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/reactions/run_network-bioNetGenRxn.o `test -f 'model/reactions/bioNetGenRxn.cpp' || echo './'`model/reactions/bioNetGenRxn.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/reactions/run_network-functionalRxn.o `test -f 'model/reactions/functionalRxn.cpp' || echo './'`model/reactions/functionalRxn.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/reactions/run_network-hillRxn.o `test -f 'model/reactions/hillRxn.cpp' || echo './'`model/reactions/hillRxn.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/reactions/run_network-michaelisMentenRxn.o `test -f 'model/reactions/michaelisMentenRxn.cpp' || echo './'`model/reactions/michaelisMentenRxn.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o model/reactions/run_network-saturationRxn.o `test -f 'model/reactions/saturationRxn.cpp' || echo './'`model/reactions/saturationRxn.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/base/run_network-firingGenerator.o `test -f 'pla/base/firingGenerator.cpp' || echo './'`pla/base/firingGenerator.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/run_network-PLA.o `test -f 'pla/PLA.cpp' || echo './'`pla/PLA.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/base/run_network-postleapChecker.o `test -f 'pla/base/postleapChecker.cpp' || echo './'`pla/base/postleapChecker.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/base/run_network-rxnClassifier.o `test -f 'pla/base/rxnClassifier.cpp' || echo './'`pla/base/rxnClassifier.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/base/run_network-tauCalculator.o `test -f 'pla/base/tauCalculator.cpp' || echo './'`pla/base/tauCalculator.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/run_network-eRungeKutta_postTC_RC_FG_rbPL.o `test -f 'pla/eRungeKutta/eRungeKutta_postTC_RC_FG_rbPL.cpp' || echo './'`pla/eRungeKutta/eRungeKutta_postTC_RC_FG_rbPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/run_network-eRungeKutta_postTC_RC_FG_sbPL.o `test -f 'pla/eRungeKutta/eRungeKutta_postTC_RC_FG_sbPL.cpp' || echo './'`pla/eRungeKutta/eRungeKutta_postTC_RC_FG_sbPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_negPL.o `test -f 'pla/eRungeKutta/eRungeKutta_preTC_RC_FG_negPL.cpp' || echo './'`pla/eRungeKutta/eRungeKutta_preTC_RC_FG_negPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_rbPL.o `test -f 'pla/eRungeKutta/eRungeKutta_preTC_RC_FG_rbPL.cpp' || echo './'`pla/eRungeKutta/eRungeKutta_preTC_RC_FG_rbPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_sbPL.o `test -f 'pla/eRungeKutta/eRungeKutta_preTC_RC_FG_sbPL.cpp' || echo './'`pla/eRungeKutta/eRungeKutta_preTC_RC_FG_sbPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_PL.o `test -f 'pla/eRungeKutta/base/eRungeKutta_TC_RC_FG_PL.cpp' || echo './'`pla/eRungeKutta/base/eRungeKutta_TC_RC_FG_PL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_rbPL.o `test -f 'pla/eRungeKutta/base/eRungeKutta_TC_RC_FG_rbPL.cpp' || echo './'`pla/eRungeKutta/base/eRungeKutta_TC_RC_FG_rbPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_sbPL.o `test -f 'pla/eRungeKutta/base/eRungeKutta_TC_RC_FG_sbPL.cpp' || echo './'`pla/eRungeKutta/base/eRungeKutta_TC_RC_FG_sbPL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/util/run_network-binomialCorrector_RK.o `test -f 'pla/eRungeKutta/util/binomialCorrector_RK.cpp' || echo './'`pla/eRungeKutta/util/binomialCorrector_RK.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/util/run_network-aEff_Calculator.o `test -f 'pla/eRungeKutta/util/aEff_Calculator.cpp' || echo './'`pla/eRungeKutta/util/aEff_Calculator.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/eRungeKutta/util/run_network-butcherTableau.o `test -f 'pla/eRungeKutta/util/butcherTableau.cpp' || echo './'`pla/eRungeKutta/util/butcherTableau.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEuler_FG.o `test -f 'pla/fEuler/fEuler_FG.cpp' || echo './'`pla/fEuler/fEuler_FG.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEulerPreleapRB_TC.o `test -f 'pla/fEuler/fEulerPreleapRB_TC.cpp' || echo './'`pla/fEuler/fEulerPreleapRB_TC.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEulerPreleapSB_TC.o `test -f 'pla/fEuler/fEulerPreleapSB_TC.cpp' || echo './'`pla/fEuler/fEulerPreleapSB_TC.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEulerRB_TC_PL.o `test -f 'pla/fEuler/fEulerRB_TC_PL.cpp' || echo './'`pla/fEuler/fEulerRB_TC_PL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEulerRB_PL.o `test -f 'pla/fEuler/fEulerRB_PL.cpp' || echo './'`pla/fEuler/fEulerRB_PL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEuler_RC.o `test -f 'pla/fEuler/fEuler_RC.cpp' || echo './'`pla/fEuler/fEuler_RC.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEulerSB_PL.o `test -f 'pla/fEuler/fEulerSB_PL.cpp' || echo './'`pla/fEuler/fEulerSB_PL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/fEuler/run_network-fEulerSB_TC_PL.o `test -f 'pla/fEuler/fEulerSB_TC_PL.cpp' || echo './'`pla/fEuler/fEulerSB_TC_PL.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/util/run_network-negPopChecker.o `test -f 'pla/util/negPopChecker.cpp' || echo './'`pla/util/negPopChecker.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/util/run_network-g_Getter.o `test -f 'pla/util/g_Getter.cpp' || echo './'`pla/util/g_Getter.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/util/run_network-preleap_TC.o `test -f 'pla/util/preleap_TC.cpp' || echo './'`pla/util/preleap_TC.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/util/run_network-rbChecker.o `test -f 'pla/util/rbChecker.cpp' || echo './'`pla/util/rbChecker.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/util/run_network-sbChecker.o `test -f 'pla/util/sbChecker.cpp' || echo './'`pla/util/sbChecker.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o pla/util/run_network-fixed_TC.o `test -f 'pla/util/fixed_TC.cpp' || echo './'`pla/util/fixed_TC.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o util/run_network-rand.o `test -f 'util/rand.cpp' || echo './'`util/rand.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o util/MTrand/run_network-mtrand.o `test -f 'util/MTrand/mtrand.cpp' || echo './'`util/MTrand/mtrand.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o util/rand2/run_network-rand2.o `test -f 'util/rand2/rand2.cpp' || echo './'`util/rand2/rand2.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
g++ -DHAVE_CONFIG_H -I. -I..  -I/usr/include -I../muparser_v2_2_4/include -I../cvode-2.6.0/include -Iutil/mathutils   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -c -o util/run_network-conversion.o `test -f 'util/conversion.cpp' || echo './'`util/conversion.cpp
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/cabs.lo util/mathutils/cabs.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cabs.c  -fPIC -DPIC -o util/mathutils/.libs/cabs.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cabs.c -o util/mathutils/cabs.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/cabs.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/allocate.lo util/mathutils/allocate.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/allocate.c  -fPIC -DPIC -o util/mathutils/.libs/allocate.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/allocate.c -o util/mathutils/allocate.o >/dev/null 2>&1
BUILDSTDERR: util/mathutils/allocate.c: In function 'ALLOC_MATRIX':
BUILDSTDERR: util/mathutils/allocate.c:9:20: warning: unused variable 'j' [-Wunused-variable]
BUILDSTDERR:     9 |     register int i,j;
BUILDSTDERR:       |                    ^
BUILDSTDERR: util/mathutils/allocate.c: In function 'IALLOC_MATRIX':
BUILDSTDERR: util/mathutils/allocate.c:100:20: warning: unused variable 'j' [-Wunused-variable]
BUILDSTDERR:   100 |     register int i,j;
BUILDSTDERR:       |                    ^
BUILDSTDERR: util/mathutils/allocate.c: In function 'ZALLOC_MATRIX':
BUILDSTDERR: util/mathutils/allocate.c:191:20: warning: unused variable 'j' [-Wunused-variable]
BUILDSTDERR:   191 |     register int i,j;
BUILDSTDERR:       |                    ^
BUILDSTDERR: In file included from util/mathutils/allocate.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/cadd.lo util/mathutils/cadd.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cadd.c  -fPIC -DPIC -o util/mathutils/.libs/cadd.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cadd.c -o util/mathutils/cadd.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/cadd.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/cconj.lo util/mathutils/cconj.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cconj.c  -fPIC -DPIC -o util/mathutils/.libs/cconj.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cconj.c -o util/mathutils/cconj.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/cconj.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/cmult.lo util/mathutils/cmult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cmult.c  -fPIC -DPIC -o util/mathutils/.libs/cmult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cmult.c -o util/mathutils/cmult.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/cmult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/complex_zero.lo util/mathutils/complex_zero.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/complex_zero.c  -fPIC -DPIC -o util/mathutils/.libs/complex_zero.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/complex_zero.c -o util/mathutils/complex_zero.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/complex_zero.c:2:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/copy_vector.lo util/mathutils/copy_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/copy_vector.c  -fPIC -DPIC -o util/mathutils/.libs/copy_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/copy_vector.c -o util/mathutils/copy_vector.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/copy_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/cprob.lo util/mathutils/cprob.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cprob.c  -fPIC -DPIC -o util/mathutils/.libs/cprob.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/cprob.c -o util/mathutils/cprob.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/cprob.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/csub.lo util/mathutils/csub.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/csub.c  -fPIC -DPIC -o util/mathutils/.libs/csub.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/csub.c -o util/mathutils/csub.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/csub.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/dotp.lo util/mathutils/dotp.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/dotp.c  -fPIC -DPIC -o util/mathutils/.libs/dotp.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/dotp.c -o util/mathutils/dotp.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/dotp.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/eigensystem.lo util/mathutils/eigensystem.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/eigensystem.c  -fPIC -DPIC -o util/mathutils/.libs/eigensystem.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/eigensystem.c -o util/mathutils/eigensystem.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/eigensystem.c:1:
BUILDSTDERR: util/mathutils/eigensystem.c: In function 'SYM_EIGENSYSTEM':
BUILDSTDERR: util/mathutils/eigensystem.c:27:11: warning: implicit declaration of function 'dsyev' [-Wimplicit-function-declaration]
BUILDSTDERR:    27 |     FNAME(dsyev)(&jobz, &uplo, &N, A[0], &N, evals, work, &lwork, &info);
BUILDSTDERR:       |           ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:18:20: note: in definition of macro 'FNAME'
BUILDSTDERR:    18 | #define FNAME(fun) fun
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: util/mathutils/eigensystem.c: In function 'GEN_SYM_EIGENSYSTEM':
BUILDSTDERR: util/mathutils/eigensystem.c:58:11: warning: implicit declaration of function 'dsygv' [-Wimplicit-function-declaration]
BUILDSTDERR:    58 |     FNAME(dsygv)(&itype, &jobz, &uplo, &N, A[0], &N, B[0], &N, evals, work,
BUILDSTDERR:       |           ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:18:20: note: in definition of macro 'FNAME'
BUILDSTDERR:    18 | #define FNAME(fun) fun
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/expi.lo util/mathutils/expi.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/expi.c  -fPIC -DPIC -o util/mathutils/.libs/expi.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/expi.c -o util/mathutils/expi.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/expi.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/gram_schmidt.lo util/mathutils/gram_schmidt.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/gram_schmidt.c  -fPIC -DPIC -o util/mathutils/.libs/gram_schmidt.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/gram_schmidt.c -o util/mathutils/gram_schmidt.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/gram_schmidt.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/herm_matrix_mult.lo util/mathutils/herm_matrix_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/herm_matrix_mult.c  -fPIC -DPIC -o util/mathutils/.libs/herm_matrix_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/herm_matrix_mult.c -o util/mathutils/herm_matrix_mult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/herm_matrix_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/herm_matrix_vector_mult.lo util/mathutils/herm_matrix_vector_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/herm_matrix_vector_mult.c  -fPIC -DPIC -o util/mathutils/.libs/herm_matrix_vector_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/herm_matrix_vector_mult.c -o util/mathutils/herm_matrix_vector_mult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/herm_matrix_vector_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/icmult.lo util/mathutils/icmult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/icmult.c  -fPIC -DPIC -o util/mathutils/.libs/icmult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/icmult.c -o util/mathutils/icmult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/icmult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/init.lo util/mathutils/init.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/init.c  -fPIC -DPIC -o util/mathutils/.libs/init.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/init.c -o util/mathutils/init.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/init.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/integration.lo util/mathutils/integration.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/integration.c  -fPIC -DPIC -o util/mathutils/.libs/integration.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/integration.c -o util/mathutils/integration.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/integration.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/linsolve.lo util/mathutils/linsolve.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/linsolve.c  -fPIC -DPIC -o util/mathutils/.libs/linsolve.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/linsolve.c -o util/mathutils/linsolve.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: util/mathutils/linsolve.c: In function 'LINSOLVE':
BUILDSTDERR: util/mathutils/linsolve.c:16:20: warning: unused variable 'j' [-Wunused-variable]
BUILDSTDERR:    16 |     register int i,j;
BUILDSTDERR:       |                    ^
BUILDSTDERR: util/mathutils/linsolve.c:16:18: warning: unused variable 'i' [-Wunused-variable]
BUILDSTDERR:    16 |     register int i,j;
BUILDSTDERR:       |                  ^
BUILDSTDERR: In file included from util/mathutils/linsolve.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matherr.lo util/mathutils/matherr.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matherr.c  -fPIC -DPIC -o util/mathutils/.libs/matherr.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matherr.c -o util/mathutils/matherr.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matherr.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrix_add.lo util/mathutils/matrix_add.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_add.c  -fPIC -DPIC -o util/mathutils/.libs/matrix_add.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_add.c -o util/mathutils/matrix_add.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matrix_add.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrix_elt.lo util/mathutils/matrix_elt.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_elt.c  -fPIC -DPIC -o util/mathutils/.libs/matrix_elt.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_elt.c -o util/mathutils/matrix_elt.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matrix_elt.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrix_mult.lo util/mathutils/matrix_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_mult.c  -fPIC -DPIC -o util/mathutils/.libs/matrix_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_mult.c -o util/mathutils/matrix_mult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matrix_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrix_sub.lo util/mathutils/matrix_sub.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_sub.c  -fPIC -DPIC -o util/mathutils/.libs/matrix_sub.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_sub.c -o util/mathutils/matrix_sub.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matrix_sub.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrix_transpose.lo util/mathutils/matrix_transpose.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_transpose.c  -fPIC -DPIC -o util/mathutils/.libs/matrix_transpose.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_transpose.c -o util/mathutils/matrix_transpose.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matrix_transpose.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrix_vector_mult.lo util/mathutils/matrix_vector_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_vector_mult.c  -fPIC -DPIC -o util/mathutils/.libs/matrix_vector_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrix_vector_mult.c -o util/mathutils/matrix_vector_mult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/matrix_vector_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/matrixexp.lo util/mathutils/matrixexp.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrixexp.c  -fPIC -DPIC -o util/mathutils/.libs/matrixexp.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/matrixexp.c -o util/mathutils/matrixexp.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/matrixexp.c:5:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/minimum.lo util/mathutils/minimum.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/minimum.c  -fPIC -DPIC -o util/mathutils/.libs/minimum.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/minimum.c -o util/mathutils/minimum.o >/dev/null 2>&1
BUILDSTDERR: util/mathutils/minimum.c: In function 'MIN_BRACKET':
BUILDSTDERR: util/mathutils/minimum.c:17:26: warning: unused variable 'dum' [-Wunused-variable]
BUILDSTDERR:    17 |     double ulim,u,r,q,fu,dum;
BUILDSTDERR:       |                          ^~~
BUILDSTDERR: In file included from util/mathutils/minimum.c:3:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
BUILDSTDERR: util/mathutils/minimum.c: In function 'MIN_FIND':
BUILDSTDERR: util/mathutils/minimum.c:117:31: warning: 'e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   117 |      if (fabs(p) >= fabs(0.5*q*etemp) || p <= q*(a-x) || p >= q*(b-x))
BUILDSTDERR:       |                          ~~~~~^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/norm.lo util/mathutils/norm.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/norm.c  -fPIC -DPIC -o util/mathutils/.libs/norm.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/norm.c -o util/mathutils/norm.o >/dev/null 2>&1
BUILDSTDERR: util/mathutils/norm.c: In function 'NORM':
BUILDSTDERR: util/mathutils/norm.c:14:12: warning: unused variable 'norm' [-Wunused-variable]
BUILDSTDERR:    14 |     double norm;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: In file included from util/mathutils/norm.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/normsq.lo util/mathutils/normsq.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/normsq.c  -fPIC -DPIC -o util/mathutils/.libs/normsq.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/normsq.c -o util/mathutils/normsq.o >/dev/null 2>&1
BUILDSTDERR: util/mathutils/normsq.c: In function 'NORMSQ':
BUILDSTDERR: util/mathutils/normsq.c:13:12: warning: unused variable 'norm' [-Wunused-variable]
BUILDSTDERR:    13 |     double norm;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: In file included from util/mathutils/normsq.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/project.lo util/mathutils/project.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/project.c  -fPIC -DPIC -o util/mathutils/.libs/project.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/project.c -o util/mathutils/project.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/project.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/random.lo util/mathutils/random.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/random.c  -fPIC -DPIC -o util/mathutils/.libs/random.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/random.c -o util/mathutils/random.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/random.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/rcmult.lo util/mathutils/rcmult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/rcmult.c  -fPIC -DPIC -o util/mathutils/.libs/rcmult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/rcmult.c -o util/mathutils/rcmult.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/rcmult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/rect_transpose.lo util/mathutils/rect_transpose.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/rect_transpose.c  -fPIC -DPIC -o util/mathutils/.libs/rect_transpose.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/rect_transpose.c -o util/mathutils/rect_transpose.o >/dev/null 2>&1
BUILDSTDERR: util/mathutils/rect_transpose.c: In function 'RECT_TRANSPOSE':
BUILDSTDERR: util/mathutils/rect_transpose.c:5:26: warning: unused variable 'Atptr' [-Wunused-variable]
BUILDSTDERR:     5 |     double **At, *Aptr, *Atptr;
BUILDSTDERR:       |                          ^~~~~
BUILDSTDERR: util/mathutils/rect_transpose.c:5:19: warning: unused variable 'Aptr' [-Wunused-variable]
BUILDSTDERR:     5 |     double **At, *Aptr, *Atptr;
BUILDSTDERR:       |                   ^~~~
BUILDSTDERR: In file included from util/mathutils/rect_transpose.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/roots.lo util/mathutils/roots.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/roots.c  -fPIC -DPIC -o util/mathutils/.libs/roots.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/roots.c -o util/mathutils/roots.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/roots.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
BUILDSTDERR: util/mathutils/roots.c: In function 'ROOT_FIND':
BUILDSTDERR: util/mathutils/roots.c:69:17: warning: 'e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    69 |      min2=fabs(e*q);
BUILDSTDERR:       |                ~^~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/scale_vector.lo util/mathutils/scale_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/scale_vector.c  -fPIC -DPIC -o util/mathutils/.libs/scale_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/scale_vector.c -o util/mathutils/scale_vector.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/scale_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/runge-kutta.lo util/mathutils/runge-kutta.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/runge-kutta.c  -fPIC -DPIC -o util/mathutils/.libs/runge-kutta.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/runge-kutta.c -o util/mathutils/runge-kutta.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/runge-kutta.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/splines.lo util/mathutils/splines.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/splines.c  -fPIC -DPIC -o util/mathutils/.libs/splines.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/splines.c -o util/mathutils/splines.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/splines.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/sum_vector.lo util/mathutils/sum_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sum_vector.c  -fPIC -DPIC -o util/mathutils/.libs/sum_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sum_vector.c -o util/mathutils/sum_vector.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/sum_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/sym_linsolve.lo util/mathutils/sym_linsolve.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sym_linsolve.c  -fPIC -DPIC -o util/mathutils/.libs/sym_linsolve.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sym_linsolve.c -o util/mathutils/sym_linsolve.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/sym_linsolve.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/sym_matrix_mult.lo util/mathutils/sym_matrix_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sym_matrix_mult.c  -fPIC -DPIC -o util/mathutils/.libs/sym_matrix_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sym_matrix_mult.c -o util/mathutils/sym_matrix_mult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/sym_matrix_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/sym_matrix_vector_mult.lo util/mathutils/sym_matrix_vector_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sym_matrix_vector_mult.c  -fPIC -DPIC -o util/mathutils/.libs/sym_matrix_vector_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sym_matrix_vector_mult.c -o util/mathutils/sym_matrix_vector_mult.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/sym_matrix_vector_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/svd.lo util/mathutils/svd.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/svd.c  -fPIC -DPIC -o util/mathutils/.libs/svd.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/svd.c -o util/mathutils/svd.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/svd.c:2:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/sympos_linsolve.lo util/mathutils/sympos_linsolve.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sympos_linsolve.c  -fPIC -DPIC -o util/mathutils/.libs/sympos_linsolve.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/sympos_linsolve.c -o util/mathutils/sympos_linsolve.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/sympos_linsolve.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/test_transpose.lo util/mathutils/test_transpose.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/test_transpose.c  -fPIC -DPIC -o util/mathutils/.libs/test_transpose.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/test_transpose.c -o util/mathutils/test_transpose.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: util/mathutils/test_transpose.c:3:1: warning: return type defaults to 'int' [-Wimplicit-int]
BUILDSTDERR:     3 | main()
BUILDSTDERR:       | ^~~~
BUILDSTDERR: In file included from util/mathutils/test_transpose.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/testdummy.lo util/mathutils/testdummy.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testdummy.c  -fPIC -DPIC -o util/mathutils/.libs/testdummy.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testdummy.c -o util/mathutils/testdummy.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: util/mathutils/testdummy.c:3:1: warning: return type defaults to 'int' [-Wimplicit-int]
BUILDSTDERR:     3 | main(){
BUILDSTDERR:       | ^~~~
BUILDSTDERR: util/mathutils/testdummy.c: In function 'main':
BUILDSTDERR: util/mathutils/testdummy.c:5:9: warning: unused variable 'incx' [-Wunused-variable]
BUILDSTDERR:     5 |     int incx=1;
BUILDSTDERR:       |         ^~~~
BUILDSTDERR: util/mathutils/testdummy.c:9:5: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:     9 |     scanf("%d", &n);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~
BUILDSTDERR: util/mathutils/testdummy.c:15:2: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    15 |  scanf("%lf", x+i);
BUILDSTDERR:       |  ^~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from util/mathutils/testdummy.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/testspline.lo util/mathutils/testspline.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testspline.c  -fPIC -DPIC -o util/mathutils/.libs/testspline.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testspline.c -o util/mathutils/testspline.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: util/mathutils/testspline.c:7:1: warning: return type defaults to 'int' [-Wimplicit-int]
BUILDSTDERR:     7 | main()
BUILDSTDERR:       | ^~~~
BUILDSTDERR: In file included from util/mathutils/testspline.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/testgram.lo util/mathutils/testgram.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testgram.c  -fPIC -DPIC -o util/mathutils/.libs/testgram.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testgram.c -o util/mathutils/testgram.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: util/mathutils/testgram.c:3:1: warning: return type defaults to 'int' [-Wimplicit-int]
BUILDSTDERR:     3 | main(int argc, char *argv[]){
BUILDSTDERR:       | ^~~~
BUILDSTDERR: util/mathutils/testgram.c: In function 'main':
BUILDSTDERR: util/mathutils/testgram.c:7:63: warning: unused variable 'V' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **At, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                                                               ^
BUILDSTDERR: util/mathutils/testgram.c:7:58: warning: unused variable 'w' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **At, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                                                          ^
BUILDSTDERR: util/mathutils/testgram.c:7:52: warning: unused variable 'UtU' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **At, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                                                    ^~~
BUILDSTDERR: util/mathutils/testgram.c:7:46: warning: unused variable 'Ut' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **At, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                                              ^~
BUILDSTDERR: util/mathutils/testgram.c:5:7: warning: unused variable 'nr' [-Wunused-variable]
BUILDSTDERR:     5 |   int nr, n_run;
BUILDSTDERR:       |       ^~
BUILDSTDERR: In file included from util/mathutils/testgram.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/testsvd.lo util/mathutils/testsvd.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testsvd.c  -fPIC -DPIC -o util/mathutils/.libs/testsvd.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testsvd.c -o util/mathutils/testsvd.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: util/mathutils/testsvd.c:3:1: warning: return type defaults to 'int' [-Wimplicit-int]
BUILDSTDERR:     3 | main(int argc, char *argv[]){
BUILDSTDERR:       | ^~~~
BUILDSTDERR: util/mathutils/testsvd.c: In function 'main':
BUILDSTDERR: util/mathutils/testsvd.c:7:28: warning: unused variable 'GtG' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                            ^~~
BUILDSTDERR: util/mathutils/testsvd.c:7:22: warning: unused variable 'Gt' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                      ^~
BUILDSTDERR: util/mathutils/testsvd.c:7:17: warning: unused variable 'G' [-Wunused-variable]
BUILDSTDERR:     7 |   double **A, **G, **Gt, **GtG, **U, **Ut, **UtU, *w, **V, norm;
BUILDSTDERR:       |                 ^
BUILDSTDERR: In file included from util/mathutils/testsvd.c:1:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/vector_add.lo util/mathutils/vector_add.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/vector_add.c  -fPIC -DPIC -o util/mathutils/.libs/vector_add.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/vector_add.c -o util/mathutils/vector_add.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/vector_add.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/vector_dist.lo util/mathutils/vector_dist.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/vector_dist.c  -fPIC -DPIC -o util/mathutils/.libs/vector_dist.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/vector_dist.c -o util/mathutils/vector_dist.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/vector_dist.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zcopy_vector.lo util/mathutils/zcopy_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zcopy_vector.c  -fPIC -DPIC -o util/mathutils/.libs/zcopy_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zcopy_vector.c -o util/mathutils/zcopy_vector.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/zcopy_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zdotc.lo util/mathutils/zdotc.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zdotc.c  -fPIC -DPIC -o util/mathutils/.libs/zdotc.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zdotc.c -o util/mathutils/zdotc.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/zdotc.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/testutils.lo util/mathutils/testutils.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testutils.c  -fPIC -DPIC -o util/mathutils/.libs/testutils.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/testutils.c -o util/mathutils/testutils.o >/dev/null 2>&1
BUILDSTDERR: util/mathutils/testutils.c:6:1: warning: return type defaults to 'int' [-Wimplicit-int]
BUILDSTDERR:     6 | main (int argc, char *argv[])
BUILDSTDERR:       | ^~~~
BUILDSTDERR: util/mathutils/testutils.c: In function 'main':
BUILDSTDERR: util/mathutils/testutils.c:15:12: warning: unused variable 'z1' [-Wunused-variable]
BUILDSTDERR:    15 |   dcomplex z1;
BUILDSTDERR:       |            ^~
BUILDSTDERR: util/mathutils/testutils.c:10:7: warning: unused variable 'seed' [-Wunused-variable]
BUILDSTDERR:    10 |   int seed;
BUILDSTDERR:       |       ^~~~
BUILDSTDERR: util/mathutils/testutils.c:8:11: warning: unused variable 'k' [-Wunused-variable]
BUILDSTDERR:     8 |   int i,j,k;
BUILDSTDERR:       |           ^
BUILDSTDERR: In file included from util/mathutils/testutils.c:2:
BUILDSTDERR: At top level:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zdotu.lo util/mathutils/zdotu.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zdotu.c  -fPIC -DPIC -o util/mathutils/.libs/zdotu.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zdotu.c -o util/mathutils/zdotu.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zdotu.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zmatrix_add.lo util/mathutils/zmatrix_add.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_add.c  -fPIC -DPIC -o util/mathutils/.libs/zmatrix_add.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_add.c -o util/mathutils/zmatrix_add.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zmatrix_add.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zmatrix_mult.lo util/mathutils/zmatrix_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_mult.c  -fPIC -DPIC -o util/mathutils/.libs/zmatrix_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_mult.c -o util/mathutils/zmatrix_mult.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zmatrix_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zmatrix_sub.lo util/mathutils/zmatrix_sub.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_sub.c  -fPIC -DPIC -o util/mathutils/.libs/zmatrix_sub.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_sub.c -o util/mathutils/zmatrix_sub.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zmatrix_sub.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zmatrix_transpose.lo util/mathutils/zmatrix_transpose.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_transpose.c  -fPIC -DPIC -o util/mathutils/.libs/zmatrix_transpose.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_transpose.c -o util/mathutils/zmatrix_transpose.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zmatrix_transpose.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zmatrix_vector_mult.lo util/mathutils/zmatrix_vector_mult.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_vector_mult.c  -fPIC -DPIC -o util/mathutils/.libs/zmatrix_vector_mult.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zmatrix_vector_mult.c -o util/mathutils/zmatrix_vector_mult.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zmatrix_vector_mult.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/znorm.lo util/mathutils/znorm.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/znorm.c  -fPIC -DPIC -o util/mathutils/.libs/znorm.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/znorm.c -o util/mathutils/znorm.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/znorm.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/znormsq.lo util/mathutils/znormsq.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/znormsq.c  -fPIC -DPIC -o util/mathutils/.libs/znormsq.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/znormsq.c -o util/mathutils/znormsq.o >/dev/null 2>&1
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
BUILDSTDERR: In file included from util/mathutils/znormsq.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zrscale_vector.lo util/mathutils/zrscale_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zrscale_vector.c  -fPIC -DPIC -o util/mathutils/.libs/zrscale_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zrscale_vector.c -o util/mathutils/zrscale_vector.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zrscale_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zscale_vector.lo util/mathutils/zscale_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zscale_vector.c  -fPIC -DPIC -o util/mathutils/.libs/zscale_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zscale_vector.c -o util/mathutils/zscale_vector.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zscale_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zsum_vector.lo util/mathutils/zsum_vector.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zsum_vector.c  -fPIC -DPIC -o util/mathutils/.libs/zsum_vector.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zsum_vector.c -o util/mathutils/zsum_vector.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zsum_vector.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..     -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o util/mathutils/zsym_linsolve.lo util/mathutils/zsym_linsolve.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zsym_linsolve.c  -fPIC -DPIC -o util/mathutils/.libs/zsym_linsolve.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util/mathutils/zsym_linsolve.c -o util/mathutils/zsym_linsolve.o >/dev/null 2>&1
BUILDSTDERR: In file included from util/mathutils/zsym_linsolve.c:1:
BUILDSTDERR: util/mathutils/mathutils.h:364:15: warning: 'dswap' defined but not used [-Wunused-variable]
BUILDSTDERR:   364 | static double dswap;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:20: warning: 'imarg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |                    ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:359:12: warning: 'imarg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   359 | static int imarg1, imarg2;
BUILDSTDERR:       |            ^~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:22: warning: 'marg2' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |                      ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:356:15: warning: 'marg1' defined but not used [-Wunused-variable]
BUILDSTDERR:   356 | static double marg1, marg2;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: util/mathutils/mathutils.h:354:12: warning: 'isqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   354 | static int isqrarg;
BUILDSTDERR:       |            ^~~~~~~
BUILDSTDERR: util/mathutils/mathutils.h:352:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
BUILDSTDERR:   352 | static double sqrarg;
BUILDSTDERR:       |               ^~~~~~
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CC   --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libmathutils.la  util/mathutils/allocate.lo util/mathutils/cabs.lo util/mathutils/cadd.lo util/mathutils/cconj.lo util/mathutils/cmult.lo util/mathutils/complex_zero.lo util/mathutils/copy_vector.lo util/mathutils/cprob.lo util/mathutils/csub.lo util/mathutils/dotp.lo util/mathutils/eigensystem.lo util/mathutils/expi.lo util/mathutils/gram_schmidt.lo util/mathutils/herm_matrix_mult.lo util/mathutils/herm_matrix_vector_mult.lo util/mathutils/icmult.lo util/mathutils/init.lo util/mathutils/integration.lo util/mathutils/linsolve.lo util/mathutils/matherr.lo util/mathutils/matrix_add.lo util/mathutils/matrix_elt.lo util/mathutils/matrix_mult.lo util/mathutils/matrix_sub.lo util/mathutils/matrix_transpose.lo util/mathutils/matrix_vector_mult.lo util/mathutils/matrixexp.lo util/mathutils/minimum.lo util/mathutils/norm.lo util/mathutils/normsq.lo util/mathutils/project.lo util/mathutils/random.lo util/mathutils/rcmult.lo util/mathutils/rect_transpose.lo util/mathutils/roots.lo util/mathutils/runge-kutta.lo util/mathutils/scale_vector.lo util/mathutils/splines.lo util/mathutils/sum_vector.lo util/mathutils/svd.lo util/mathutils/sym_linsolve.lo util/mathutils/sym_matrix_mult.lo util/mathutils/sym_matrix_vector_mult.lo util/mathutils/sympos_linsolve.lo util/mathutils/test_transpose.lo util/mathutils/testdummy.lo util/mathutils/testgram.lo util/mathutils/testspline.lo util/mathutils/testsvd.lo util/mathutils/testutils.lo util/mathutils/vector_add.lo util/mathutils/vector_dist.lo util/mathutils/zcopy_vector.lo util/mathutils/zdotc.lo util/mathutils/zdotu.lo util/mathutils/zmatrix_add.lo util/mathutils/zmatrix_mult.lo util/mathutils/zmatrix_sub.lo util/mathutils/zmatrix_transpose.lo util/mathutils/zmatrix_vector_mult.lo util/mathutils/znorm.lo util/mathutils/znormsq.lo util/mathutils/zrscale_vector.lo util/mathutils/zscale_vector.lo util/mathutils/zsum_vector.lo util/mathutils/zsym_linsolve.lo  
libtool: link: ar cru .libs/libmathutils.a util/mathutils/.libs/allocate.o util/mathutils/.libs/cabs.o util/mathutils/.libs/cadd.o util/mathutils/.libs/cconj.o util/mathutils/.libs/cmult.o util/mathutils/.libs/complex_zero.o util/mathutils/.libs/copy_vector.o util/mathutils/.libs/cprob.o util/mathutils/.libs/csub.o util/mathutils/.libs/dotp.o util/mathutils/.libs/eigensystem.o util/mathutils/.libs/expi.o util/mathutils/.libs/gram_schmidt.o util/mathutils/.libs/herm_matrix_mult.o util/mathutils/.libs/herm_matrix_vector_mult.o util/mathutils/.libs/icmult.o util/mathutils/.libs/init.o util/mathutils/.libs/integration.o util/mathutils/.libs/linsolve.o util/mathutils/.libs/matherr.o util/mathutils/.libs/matrix_add.o util/mathutils/.libs/matrix_elt.o util/mathutils/.libs/matrix_mult.o util/mathutils/.libs/matrix_sub.o util/mathutils/.libs/matrix_transpose.o util/mathutils/.libs/matrix_vector_mult.o util/mathutils/.libs/matrixexp.o util/mathutils/.libs/minimum.o util/mathutils/.libs/norm.o util/mathutils/.libs/normsq.o util/mathutils/.libs/project.o util/mathutils/.libs/random.o util/mathutils/.libs/rcmult.o util/mathutils/.libs/rect_transpose.o util/mathutils/.libs/roots.o util/mathutils/.libs/runge-kutta.o util/mathutils/.libs/scale_vector.o util/mathutils/.libs/splines.o util/mathutils/.libs/sum_vector.o util/mathutils/.libs/svd.o util/mathutils/.libs/sym_linsolve.o util/mathutils/.libs/sym_matrix_mult.o util/mathutils/.libs/sym_matrix_vector_mult.o util/mathutils/.libs/sympos_linsolve.o util/mathutils/.libs/test_transpose.o util/mathutils/.libs/testdummy.o util/mathutils/.libs/testgram.o util/mathutils/.libs/testspline.o util/mathutils/.libs/testsvd.o util/mathutils/.libs/testutils.o util/mathutils/.libs/vector_add.o util/mathutils/.libs/vector_dist.o util/mathutils/.libs/zcopy_vector.o util/mathutils/.libs/zdotc.o util/mathutils/.libs/zdotu.o util/mathutils/.libs/zmatrix_add.o util/mathutils/.libs/zmatrix_mult.o util/mathutils/.libs/zmatrix_sub.o util/mathutils/.libs/zmatrix_transpose.o util/mathutils/.libs/zmatrix_vector_mult.o util/mathutils/.libs/znorm.o util/mathutils/.libs/znormsq.o util/mathutils/.libs/zrscale_vector.o util/mathutils/.libs/zscale_vector.o util/mathutils/.libs/zsum_vector.o util/mathutils/.libs/zsym_linsolve.o 
libtool: link: ranlib .libs/libmathutils.a
libtool: link: ( cd ".libs" && rm -f "libmathutils.la" && ln -s "../libmathutils.la" "libmathutils.la" )
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o run_network run_network-network3.o run_network-network.o run_network-run_network.o model/run_network-function.o model/run_network-observable.o model/run_network-rateExpression.o model/run_network-reaction.o model/run_network-simpleSpecies.o model/rateExpressions/run_network-rateElementary.o model/rateExpressions/run_network-rateHill.o model/rateExpressions/run_network-rateMM.o model/rateExpressions/run_network-rateMuParser.o model/rateExpressions/run_network-rateSaturation.o model/reactions/run_network-bioNetGenRxn.o model/reactions/run_network-elementaryRxn.o model/reactions/run_network-functionalRxn.o model/reactions/run_network-hillRxn.o model/reactions/run_network-michaelisMentenRxn.o model/reactions/run_network-saturationRxn.o pla/run_network-PLA.o pla/base/run_network-firingGenerator.o pla/base/run_network-postleapChecker.o pla/base/run_network-rxnClassifier.o pla/base/run_network-tauCalculator.o pla/eRungeKutta/run_network-eRungeKutta_postTC_RC_FG_rbPL.o pla/eRungeKutta/run_network-eRungeKutta_postTC_RC_FG_sbPL.o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_negPL.o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_rbPL.o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_sbPL.o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_PL.o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_rbPL.o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_sbPL.o pla/eRungeKutta/util/run_network-aEff_Calculator.o pla/eRungeKutta/util/run_network-binomialCorrector_RK.o pla/eRungeKutta/util/run_network-butcherTableau.o pla/fEuler/run_network-fEuler_FG.o pla/fEuler/run_network-fEulerPreleapRB_TC.o pla/fEuler/run_network-fEulerPreleapSB_TC.o pla/fEuler/run_network-fEulerRB_PL.o pla/fEuler/run_network-fEulerRB_TC_PL.o pla/fEuler/run_network-fEuler_RC.o pla/fEuler/run_network-fEulerSB_PL.o pla/fEuler/run_network-fEulerSB_TC_PL.o pla/util/run_network-g_Getter.o pla/util/run_network-negPopChecker.o pla/util/run_network-preleap_TC.o pla/util/run_network-rbChecker.o pla/util/run_network-sbChecker.o pla/util/run_network-fixed_TC.o util/run_network-conversion.o util/run_network-rand.o util/MTrand/run_network-mtrand.o util/rand2/run_network-rand2.o util/run_network-misc.o libmathutils.la -lmuparser -lsundials_nvecserial -lsundials_cvode 
libtool: link: g++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -Wno-unused-function -Wno-unused-but-set-variable -Wno-maybe-uninitialized -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o run_network run_network-network3.o run_network-network.o run_network-run_network.o model/run_network-function.o model/run_network-observable.o model/run_network-rateExpression.o model/run_network-reaction.o model/run_network-simpleSpecies.o model/rateExpressions/run_network-rateElementary.o model/rateExpressions/run_network-rateHill.o model/rateExpressions/run_network-rateMM.o model/rateExpressions/run_network-rateMuParser.o model/rateExpressions/run_network-rateSaturation.o model/reactions/run_network-bioNetGenRxn.o model/reactions/run_network-elementaryRxn.o model/reactions/run_network-functionalRxn.o model/reactions/run_network-hillRxn.o model/reactions/run_network-michaelisMentenRxn.o model/reactions/run_network-saturationRxn.o pla/run_network-PLA.o pla/base/run_network-firingGenerator.o pla/base/run_network-postleapChecker.o pla/base/run_network-rxnClassifier.o pla/base/run_network-tauCalculator.o pla/eRungeKutta/run_network-eRungeKutta_postTC_RC_FG_rbPL.o pla/eRungeKutta/run_network-eRungeKutta_postTC_RC_FG_sbPL.o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_negPL.o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_rbPL.o pla/eRungeKutta/run_network-eRungeKutta_preTC_RC_FG_sbPL.o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_PL.o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_rbPL.o pla/eRungeKutta/base/run_network-eRungeKutta_TC_RC_FG_sbPL.o pla/eRungeKutta/util/run_network-aEff_Calculator.o pla/eRungeKutta/util/run_network-binomialCorrector_RK.o pla/eRungeKutta/util/run_network-butcherTableau.o pla/fEuler/run_network-fEuler_FG.o pla/fEuler/run_network-fEulerPreleapRB_TC.o pla/fEuler/run_network-fEulerPreleapSB_TC.o pla/fEuler/run_network-fEulerRB_PL.o pla/fEuler/run_network-fEulerRB_TC_PL.o pla/fEuler/run_network-fEuler_RC.o pla/fEuler/run_network-fEulerSB_PL.o pla/fEuler/run_network-fEulerSB_TC_PL.o pla/util/run_network-g_Getter.o pla/util/run_network-negPopChecker.o pla/util/run_network-preleap_TC.o pla/util/run_network-rbChecker.o pla/util/run_network-sbChecker.o pla/util/run_network-fixed_TC.o util/run_network-conversion.o util/run_network-rand.o util/MTrand/run_network-mtrand.o util/rand2/run_network-rand2.o util/run_network-misc.o  ./.libs/libmathutils.a -lmuparser -lsundials_nvecserial -lsundials_cvode
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
+ . /etc/profile.d/modules.sh
BUILDSTDERR: ++ '[' -z '' ']'
BUILDSTDERR: ++ '[' -z /usr/share/modulefiles ']'
BUILDSTDERR: ++ PS_CMD=/usr/bin/ps
BUILDSTDERR: ++ '[' '!' -x /usr/bin/ps ']'
BUILDSTDERR: ++ EXPR_CMD=/usr/bin/expr
BUILDSTDERR: ++ '[' '!' -x /usr/bin/expr ']'
BUILDSTDERR: ++ BASENAME_CMD=/usr/bin/basename
BUILDSTDERR: ++ '[' '!' -x /usr/bin/basename ']'
BUILDSTDERR: +++ /usr/bin/ps -p 66 -ocomm=
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/expr sh : '-*\(.*\)'
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/basename sh
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: ++ '[' -f /usr/share/lmod/lmod/init/sh ']'
BUILDSTDERR: ++ . /usr/share/lmod/lmod/init/sh
BUILDSTDERR: +++ LMOD_PKG=/usr/share/lmod/lmod
BUILDSTDERR: +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
BUILDSTDERR: +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
BUILDSTDERR: +++ MODULESHOME=/usr/share/lmod/lmod
BUILDSTDERR: +++ export LMOD_CMD
BUILDSTDERR: +++ export LMOD_PKG
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: +++ export MODULESHOME
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ module unload mpi/openmpi-x86_64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man::;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ unset LD_LIBRARY_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ unset LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/lmod/lmod/share/man::
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ unset MPI_BIN
BUILDSTDERR: ++ unset MPI_COMPILER
BUILDSTDERR: ++ unset MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ unset MPI_HOME
BUILDSTDERR: ++ unset MPI_INCLUDE
BUILDSTDERR: ++ unset MPI_LIB
BUILDSTDERR: ++ unset MPI_MAN
BUILDSTDERR: ++ unset MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ unset MPI_SUFFIX
BUILDSTDERR: ++ unset MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ unset _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
~/build/BUILD/bionetgen-BioNetGen-2.4.0
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ popd
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.McbVtg
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64
BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64
+ cd bionetgen-BioNetGen-2.4.0
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64 'INSTALL=/usr/bin/install -p' -C bng2/Network3/src
make: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make[1]: Entering directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/bin'
  /bin/sh ../libtool   --mode=install /usr/bin/install -p run_network '/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/bin'
libtool: install: /usr/bin/install -p run_network /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/bin/run_network
make[1]: Nothing to be done for 'install-data-am'.
make[1]: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
make: Leaving directory '/builddir/build/BUILD/bionetgen-BioNetGen-2.4.0/bng2/Network3/src'
+ mkdir -vp /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/perl5/vendor_perl/BioNetGen
mkdir: created directory '/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share'
mkdir: created directory '/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/perl5'
mkdir: created directory '/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/perl5/vendor_perl'
mkdir: created directory '/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/perl5/vendor_perl/BioNetGen'
+ cp -r bng2/Perl2 /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/perl5/vendor_perl/BioNetGen/
+ cp bng2/BNG2.pl /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/perl5/vendor_perl/BioNetGen/
+ /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 2.4.0-4.fc30 --unique-debug-suffix -2.4.0-4.fc30.x86_64 --unique-debug-src-base bionetgen-2.4.0-4.fc30.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/bionetgen-BioNetGen-2.4.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/bin/run_network
extracting debug info from /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/bin/run_network
/usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
BUILDSTDERR: 967 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 0
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Processing files: bionetgen-2.4.0-4.fc30.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.OTRiAf
+ umask 022
+ cd /builddir/build/BUILD
+ cd bionetgen-BioNetGen-2.4.0
+ DOCDIR=/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/doc/bionetgen
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/doc/bionetgen
+ cp -pr README.md /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/doc/bionetgen
+ cp -pr bng2/CREDITS.txt /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/doc/bionetgen
+ cp -pr bng2/CHANGES.txt /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/doc/bionetgen
+ cp -pr bng2/VERSION /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/doc/bionetgen
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.rLrCIe
+ umask 022
+ cd /builddir/build/BUILD
+ cd bionetgen-BioNetGen-2.4.0
+ LICENSEDIR=/builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/licenses/bionetgen
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/licenses/bionetgen
+ cp -pr LICENSE /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64/usr/share/licenses/bionetgen
+ exit 0
Provides: bionetgen = 2.4.0-4.fc30 bionetgen(x86-64) = 2.4.0-4.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmuparser.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_cvode.so.3()(64bit) libsundials_nvecserial.so.3()(64bit) rtld(GNU_HASH)
Processing files: bionetgen-perl-2.4.0-4.fc30.noarch
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
BUILDSTDERR: perl: warning: Setting locale failed.
BUILDSTDERR: perl: warning: Please check that your locale settings:
BUILDSTDERR: 	LANGUAGE = (unset),
BUILDSTDERR: 	LC_ALL = (unset),
BUILDSTDERR: 	LANG = "en_US.UTF-8"
BUILDSTDERR:     are supported and installed on your system.
BUILDSTDERR: perl: warning: Falling back to the standard locale ("C").
Provides: bionetgen-perl = 2.4.0-4.fc30 perl(Viz)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/perl perl(Carp) perl(Class::Struct) perl(Config) perl(Cwd) perl(Data::Dumper) perl(Exporter) perl(File::Basename) perl(File::Path) perl(File::Spec) perl(File::Spec::Win32) perl(FindBin) perl(Getopt::Long) perl(IO::Handle) perl(IO::Select) perl(IPC::Open3) perl(List::Util) perl(Math::Trig) perl(POSIX) perl(Scalar::Util) perl(Storable) perl(Symbol) perl(constant) perl(lib) perl(strict) perl(vars) perl(warnings)
Processing files: bionetgen-debugsource-2.4.0-4.fc30.x86_64
Provides: bionetgen-debugsource = 2.4.0-4.fc30 bionetgen-debugsource(x86-64) = 2.4.0-4.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bionetgen-debuginfo-2.4.0-4.fc30.x86_64
Provides: bionetgen-debuginfo = 2.4.0-4.fc30 bionetgen-debuginfo(x86-64) = 2.4.0-4.fc30 debuginfo(build-id) = 0e82f3b594453e6a232f852e0a9f53de262b53fa
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bionetgen-debugsource(x86-64) = 2.4.0-4.fc30
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64
Wrote: /builddir/build/RPMS/bionetgen-2.4.0-4.fc30.x86_64.rpm
Wrote: /builddir/build/RPMS/bionetgen-perl-2.4.0-4.fc30.noarch.rpm
Wrote: /builddir/build/RPMS/bionetgen-debugsource-2.4.0-4.fc30.x86_64.rpm
Wrote: /builddir/build/RPMS/bionetgen-debuginfo-2.4.0-4.fc30.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.MdMuMk
+ umask 022
+ cd /builddir/build/BUILD
+ cd bionetgen-BioNetGen-2.4.0
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/bionetgen-2.4.0-4.fc30.x86_64
+ exit 0
Child return code was: 0