Warning: Permanently added '44.222.245.170' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8433776-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.2 PID: 21831 Logging PID: 21832 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'bootstrap': 'off', 'build_id': 8433776, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '9798dab954d4e556f86389a42e5096eef07c9c11', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/@python/python3.12/python-neatdend', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-neatdend', 'package_version': '0.9.2-21', 'project_dirname': 'python3.12', 'project_name': 'python3.12', 'project_owner': '@python', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/@python/python3.12/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': '@python/python3.12--https://src.fedoraproject.org/user/gui1ty', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/gui1ty', 'tags': [], 'task_id': '8433776-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/@python/python3.12/python-neatdend /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/@python/python3.12/python-neatdend', '/var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend'... Running: git checkout 9798dab954d4e556f86389a42e5096eef07c9c11 -- cmd: ['git', 'checkout', '9798dab954d4e556f86389a42e5096eef07c9c11', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend rc: 0 stdout: stderr: Note: switching to '9798dab954d4e556f86389a42e5096eef07c9c11'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 9798dab automatic import of python-neatdend Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading python-neatdend-0.9.2.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o python-neatdend-0.9.2.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/@python/python3.12/python-neatdend/python-neatdend-0.9.2.tar.gz/md5/4afcae52ad6827841b9ee89218b4303a/python-neatdend-0.9.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 2381k 100 2381k 0 0 24.3M 0 --:--:-- --:--:-- --:--:-- 24.4M INFO: Reading stdout from command: md5sum python-neatdend-0.9.2.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend/python-neatdend.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734789770.650529 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend/python-neatdend.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734789770.650529 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend/python-neatdend.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.0 INFO: Mock Version: 6.0 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1734789770.650529/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 python3-dnf-4.22.0-1.fc41.noarch python3-dnf-plugins-core-4.10.0-1.fc41.noarch dnf5-5.2.8.1-2.fc41.x86_64 dnf5-plugins-5.2.8.1-2.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 104.4 KiB/s | 27.4 KiB | 00m00s Copr repository 100% | 134.9 KiB/s | 2.2 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 119.7 KiB/s | 3.8 KiB | 00m00s Repositories loaded. 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pkgconf-m4 noarch 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 989.0 B popt x86_64 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline x86_64 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 493.1 KiB rpm x86_64 4.20.0-3.fc42 copr_base 3.1 MiB rpm-build-libs x86_64 4.20.0-3.fc42 copr_base 204.1 KiB rpm-libs x86_64 4.20.0-3.fc42 copr_base 710.4 KiB rpm-sequoia x86_64 1.7.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB rust-srpm-macros noarch 26.3-3.fc42 copr_base 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs x86_64 3.47.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB systemd-libs x86_64 257.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB util-linux-core x86_64 2.40.2-8.fc42 copr_base 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.4 KiB xz-libs x86_64 1:5.6.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-42.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 695.9 KiB zlib-ng-compat x86_64 2.2.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 51 MiB. Need to download 0 B. After this operation, 178 MiB extra will be used (install 178 MiB, remove 0 B). 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Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.x86_64 alternatives-1.31-1.fc42.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc42.x86_64 authselect-1.5.0-8.fc42.x86_64 authselect-libs-1.5.0-8.fc42.x86_64 basesystem-11-21.fc41.noarch bash-5.2.37-1.fc42.x86_64 binutils-2.43.50-9.fc42.x86_64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch coreutils-9.5-11.fc42.x86_64 coreutils-common-9.5-11.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch curl-8.11.1-2.fc42.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.1-2.fc42.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc42.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-13.fc42.noarch elfutils-0.192-7.fc42.x86_64 elfutils-debuginfod-client-0.192-7.fc42.x86_64 elfutils-default-yama-scope-0.192-7.fc42.noarch elfutils-libelf-0.192-7.fc42.x86_64 elfutils-libs-0.192-7.fc42.x86_64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.11.noarch fedora-release-common-42-0.11.noarch fedora-release-identity-basic-42-0.11.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-8.fc42.x86_64 file-libs-5.45-8.fc42.x86_64 filesystem-3.18-29.fc42.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-6.fc42.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-24.fc42.x86_64 glibc-common-2.40.9000-24.fc42.x86_64 glibc-gconv-extra-2.40.9000-24.fc42.x86_64 glibc-minimal-langpack-2.40.9000-24.fc42.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc42.noarch grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1.1-2.fc42.x86_64 jansson-2.14-1.fc42.x86_64 json-c-0.18-1.fc42.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-3.fc42.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.7-1.fc42.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-8.fc42.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.71-1.fc42.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc42.x86_64 libcurl-8.11.1-2.fc42.x86_64 libeconf-0.7.5-1.fc42.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-8.fc42.x86_64 libffi-3.4.6-3.fc42.x86_64 libgcc-14.2.1-6.fc42.x86_64 libgomp-14.2.1-6.fc42.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-8.fc42.x86_64 libnghttp2-1.64.0-1.fc42.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc42.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.8-0.rc3.1.fc42.x86_64 libsemanage-3.8-0.rc3.1.fc42.x86_64 libsepol-3.8-0.rc3.1.fc42.x86_64 libsmartcols-2.40.2-8.fc42.x86_64 libssh-0.11.1-1.fc42.x86_64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-6.fc42.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-1.fc42.x86_64 libtool-ltdl-2.5.4-1.fc42.x86_64 libunistring-1.1-8.fc41.x86_64 libuuid-2.40.2-8.fc42.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-12.fc42.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.7-1.fc42.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc42.x86_64 openssl-libs-3.2.2-8.fc42.x86_64 p11-kit-0.25.5-4.fc42.x86_64 p11-kit-trust-0.25.5-4.fc42.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-3.fc42.x86_64 pam-libs-1.7.0-3.fc42.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.x86_64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.3-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.1-4.fc42.noarch readline-8.2-11.fc42.x86_64 redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-3.fc42.x86_64 rpm-build-4.20.0-3.fc42.x86_64 rpm-build-libs-4.20.0-3.fc42.x86_64 rpm-libs-4.20.0-3.fc42.x86_64 rpm-sequoia-1.7.0-3.fc42.x86_64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.17.0~rc1-1.fc42.x86_64 sqlite-libs-3.47.2-1.fc42.x86_64 systemd-libs-257.1-1.fc42.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-65.fc42.x86_64 util-linux-2.40.2-8.fc42.x86_64 util-linux-core-2.40.2-8.fc42.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc42.x86_64 xz-5.6.3-2.fc42.x86_64 xz-libs-5.6.3-2.fc42.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-42.fc42.x86_64 zlib-ng-compat-2.2.2-1.fc42.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1734652800 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-21.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1734789770.650529/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-yl5y0c9y/python-neatdend/python-neatdend.spec) Config(child) 0 minutes 7 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-neatdend-0.9.2-21.fc42.src.rpm) Config(fedora-rawhide-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1734789770.650529/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 python3-dnf-4.22.0-1.fc41.noarch python3-dnf-plugins-core-4.10.0-1.fc41.noarch dnf5-5.2.8.1-2.fc41.x86_64 dnf5-plugins-5.2.8.1-2.fc41.x86_64 Finish: chroot init Start: build phase for python-neatdend-0.9.2-21.fc42.src.rpm Start: build setup for python-neatdend-0.9.2-21.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1734652800 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-21.fc42.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 212.7 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 196.3 KiB/s | 2.2 KiB | 00m00s fedora 100% | 98.4 KiB/s | 27.4 KiB | 00m00s Repositories loaded. 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.3 KiB perl-podlators noarch 1:6.0.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 317.5 KiB perl-threads x86_64 1:2.40-511.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 115.1 KiB perl-threads-shared x86_64 1.69-511.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83.7 KiB perl-vars noarch 1.05-512.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 KiB pyproject-rpm-macros noarch 1.16.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113.7 KiB python-pip-wheel noarch 24.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.1 KiB python3 x86_64 3.13.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.6 KiB python3-iniconfig noarch 1.1.1-24.fc41 copr_base 20.6 KiB python3-libs x86_64 3.13.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.8 MiB python3-packaging noarch 24.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 555.7 KiB python3-pluggy noarch 1.5.0-1.fc42 copr_base 193.2 KiB python3-rpm-generators noarch 14-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.4 KiB readline-devel x86_64 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 553.0 KiB tzdata noarch 2024b-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB xorg-x11-proto-devel noarch 2024.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Transaction Summary: Installing: 128 packages Total size of inbound packages is 108 MiB. Need to download 98 MiB. After this operation, 360 MiB extra will be used (install 360 MiB, remove 0 B). [1/5] python3-devel-0:3.13.1-2.fc42.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/8] python3-0:3.13.1-2.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [3/9] python3-iniconfig-0:1.1.1-24.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/11] python3-pluggy-0:1.5.0-1.fc42.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/13] python3-libs-0:3.13.1-2.fc42.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/33] expat-0:2.6.4-1.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/65] libb2-0:0.98.1-12.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/66] mpdecimal-0:2.5.1-16.fc41.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/68] tzdata-0:2024b-1.fc42.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 10/122] pyproject-rpm-macros-0:1.16.3 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 11/123] python-rpm-macros-0:3.13-3.fc 100% | 0.0 B/s | 0.0 B 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00m00s [ 24/128] libtool-0:2.5.4-1.fc42.x86_64 100% | 60.2 MiB/s | 616.0 KiB | 00m00s [ 25/128] ncurses-devel-0:6.5-2.2024062 100% | 66.3 MiB/s | 543.2 KiB | 00m00s [ 26/128] readline-devel-0:8.2-11.fc42. 100% | 21.6 MiB/s | 199.2 KiB | 00m00s [ 27/128] iv-0:0.1-0.10.20200818git1489 100% | 77.9 MiB/s | 1.1 MiB | 00m00s [ 28/128] libX11-0:1.8.10-2.fc42.x86_64 100% | 52.9 MiB/s | 649.7 KiB | 00m00s [ 29/128] ncurses-c++-libs-0:6.5-2.2024 100% | 5.3 MiB/s | 37.8 KiB | 00m00s [ 30/128] autoconf-0:2.72-3.fc41.noarch 100% | 61.4 MiB/s | 817.0 KiB | 00m00s [ 31/128] automake-0:1.17-1.fc42.noarch 100% | 45.2 MiB/s | 694.4 KiB | 00m00s [ 32/128] libXext-0:1.3.6-2.fc41.x86_64 100% | 6.4 MiB/s | 39.1 KiB | 00m00s [ 33/128] libX11-xcb-0:1.8.10-2.fc42.x8 100% | 1.3 MiB/s | 11.9 KiB | 00m00s [ 34/128] xorg-x11-proto-devel-0:2024.1 100% | 11.3 MiB/s | 265.9 KiB | 00m00s [ 35/128] libxcb-devel-0:1.17.0-3.fc42. 100% | 76.6 MiB/s | 1.1 MiB | 00m00s [ 36/128] libX11-common-0:1.8.10-2.fc42 100% | 14.1 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| 186.5 MiB/s | 2.2 MiB | 00m00s [ 63/128] m4-0:1.4.19-10.fc41.x86_64 100% | 48.6 MiB/s | 298.8 KiB | 00m00s [ 64/128] perl-Data-Dumper-0:2.189-512. 100% | 7.9 MiB/s | 56.3 KiB | 00m00s [ 65/128] perl-File-Copy-0:2.41-512.fc4 100% | 6.5 MiB/s | 20.1 KiB | 00m00s [ 66/128] perl-File-Compare-0:1.100.800 100% | 3.2 MiB/s | 13.2 KiB | 00m00s [ 67/128] perl-File-Find-0:1.44-512.fc4 100% | 6.2 MiB/s | 25.3 KiB | 00m00s [ 68/128] perl-File-Temp-1:0.231.100-51 100% | 14.4 MiB/s | 59.1 KiB | 00m00s [ 69/128] perl-File-stat-0:1.14-512.fc4 100% | 3.3 MiB/s | 17.0 KiB | 00m00s [ 70/128] perl-Text-ParseWords-0:3.31-5 100% | 4.0 MiB/s | 16.6 KiB | 00m00s [ 71/128] perl-POSIX-0:2.20-512.fc42.x8 100% | 15.8 MiB/s | 97.0 KiB | 00m00s [ 72/128] python-pip-wheel-0:24.3.1-1.f 100% | 109.5 MiB/s | 1.2 MiB | 00m00s [ 73/128] perl-overload-0:1.37-512.fc42 100% | 5.6 MiB/s | 45.5 KiB | 00m00s [ 74/128] perl-Scalar-List-Utils-5:1.68 100% | 9.1 MiB/s | 74.2 KiB | 00m00s [ 75/128] perl-mro-0:1.29-512.fc42.x86_ 100% | 7.3 MiB/s | 29.9 KiB | 00m00s [ 76/128] perl-overloading-0:0.02-512.f 100% | 3.1 MiB/s | 12.9 KiB | 00m00s [ 77/128] perl-DynaLoader-0:1.56-512.fc 100% | 5.1 MiB/s | 26.0 KiB | 00m00s [ 78/128] perl-threads-shared-0:1.69-51 100% | 10.9 MiB/s | 44.7 KiB | 00m00s [ 79/128] perl-Fcntl-0:1.18-512.fc42.x8 100% | 7.3 MiB/s | 29.8 KiB | 00m00s [ 80/128] perl-locale-0:1.12-512.fc42.n 100% | 2.2 MiB/s | 13.6 KiB | 00m00s [ 81/128] perl-SelectSaver-0:1.02-512.f 100% | 1.9 MiB/s | 11.7 KiB | 00m00s [ 82/128] perl-Encode-4:3.21-511.fc41.x 100% | 80.4 MiB/s | 1.0 MiB | 00m00s [ 83/128] perl-Socket-4:2.038-511.fc41. 100% | 7.6 MiB/s | 54.8 KiB | 00m00s [ 84/128] perl-Symbol-0:1.09-512.fc42.n 100% | 2.3 MiB/s | 14.2 KiB | 00m00s [ 85/128] perl-Pod-Usage-4:2.03-511.fc4 100% | 4.9 MiB/s | 40.0 KiB | 00m00s [ 86/128] perl-base-0:2.27-512.fc42.noa 100% | 2.6 MiB/s | 16.2 KiB | 00m00s [ 87/128] perl-parent-1:0.244-1.fc42.no 100% | 1.6 MiB/s | 15.1 KiB | 00m00s [ 88/128] perl-vars-0:1.05-512.fc42.noa 100% | 1.4 MiB/s | 13.0 KiB | 00m00s [ 89/128] perl-Getopt-Std-0:1.14-512.fc 100% | 2.5 MiB/s | 15.6 KiB | 00m00s [ 90/128] perl-MIME-Base64-0:3.16-511.f 100% | 5.8 MiB/s | 29.9 KiB | 00m00s [ 91/128] perl-Storable-1:3.32-511.fc41 100% | 16.0 MiB/s | 98.4 KiB | 00m00s [ 92/128] perl-B-0:1.89-512.fc42.x86_64 100% | 21.5 MiB/s | 176.3 KiB | 00m00s [ 93/128] perl-if-0:0.61.000-512.fc42.n 100% | 2.3 MiB/s | 14.0 KiB | 00m00s [ 94/128] libedit-0:3.1-53.20240808cvs. 100% | 14.7 MiB/s | 105.6 KiB | 00m00s [ 95/128] openssh-0:9.9p1-5.fc42.x86_64 100% | 34.1 MiB/s | 349.2 KiB | 00m00s [ 96/128] libfido2-0:1.15.0-2.fc41.x86_ 100% | 9.6 MiB/s | 98.1 KiB | 00m00s [ 97/128] libXau-devel-0:1.0.12-1.fc42. 100% | 1.9 MiB/s | 13.9 KiB | 00m00s [ 98/128] libXau-0:1.0.12-1.fc42.x86_64 100% | 7.9 MiB/s | 32.2 KiB | 00m00s [ 99/128] libcbor-0:0.11.0-2.fc41.x86_6 100% | 5.4 MiB/s | 33.1 KiB | 00m00s [100/128] libICE-0:1.1.2-1.fc42.x86_64 100% | 14.8 MiB/s | 75.6 KiB | 00m00s 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Finish: build setup for python-neatdend-0.9.2-21.fc42.src.rpm Start: rpmbuild python-neatdend-0.9.2-21.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1734652800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.hQ9QFT + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + test -d /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.nu4EI4 + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + rm -rf NEAT-0.9.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-neatdend-0.9.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd NEAT-0.9.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1734652800 + GIT_AUTHOR_DATE=@1734652800 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-neatdend-0.9.2 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-feat-support-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/neuron/neuronmodel.py... Applied patch neat/tools/simtools/neuron/neuronmodel.py cleanly. + GIT_COMMITTER_DATE=@1734652800 + GIT_AUTHOR_DATE=@1734652800 + /usr/bin/git commit -q -m 0001-feat-support-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/504b39822b9913e5a8c6aff65df840cc2e31167d.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/net/netsim.pyx... Applied patch neat/tools/simtools/net/netsim.pyx cleanly. + GIT_COMMITTER_DATE=@1734652800 + GIT_AUTHOR_DATE=@1734652800 + /usr/bin/git commit -q -m 504b39822b9913e5a8c6aff65df840cc2e31167d.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/plottools/scalebars.py... Applied patch neat/tools/plottools/scalebars.py cleanly. + GIT_COMMITTER_DATE=@1734652800 + GIT_AUTHOR_DATE=@1734652800 + /usr/bin/git commit -q -m 8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch --author 'rpm-build ' + sed -i 's/^numpy~=1.20.2/numpy>=1.20.2/' requirements/requirements.txt + sed -i 's/^matplotlib~=3.4.1/matplotlib>=3.4.1/' requirements/requirements.txt + sed -i 's/^pytest~=5.3.2/pytest>=5.3.2/' requirements/requirements.txt + sed -i 's/^scikit_learn~=0.24.2/scikit_learn>=0.24.2/' requirements/requirements.txt + sed -i 's/^scipy~=1.6.3/scipy>=1.6.3/' requirements/requirements.txt + sed -i 's/^sympy~=1.7.1/sympy>=1.7.1/' requirements/requirements.txt + sed -i 's/^cython~=0.29.4/cython>=3.0.0/' requirements/requirements.txt ++ grep -rl 'np\.NaN' + sed -i 's/np\.NaN/np.nan/g' neat/trees/sovtree.py ++ grep -rl 'np\.infty' + sed -i 's/np\.infty/np.inf/g' neat/trees/greenstree.py tests/test_net.py ++ grep -rl 'np\.product' + sed -i 's/np\.product/np.prod/g' tests/test_ionchannels.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.RzIJGl + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement not satisfied: setuptools Handling wheel from build-system.requires Requirement not satisfied: wheel Handling Cython from build-system.requires Requirement not satisfied: Cython Handling numpy from build-system.requires Requirement not satisfied: numpy Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-21.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 102.8 KiB/s | 27.4 KiB | 00m00s Copr repository 100% | 143.9 KiB/s | 2.2 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 174.0 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "gcc-14.2.1-6.fc42.x86_64" is already installed. Package "gcc-c++-14.2.1-6.fc42.x86_64" is already installed. Package "git-core-2.47.1-1.fc42.x86_64" is already installed. Package "neuron-devel-8.2.2-11.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.x86_64" is already installed. Package "python3-neuron-8.2.2-11.fc41.x86_64" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-cython x86_64 3.0.11-1.fc41 copr_base 18.1 MiB python3-numpy x86_64 1:2.2.0-4.fc42 copr_base 40.8 MiB python3-pip noarch 24.3.1-1.fc42 copr_base 11.3 MiB python3-setuptools noarch 74.1.3-4.fc42 copr_base 8.4 MiB python3-wheel noarch 1:0.45.1-2.fc42 copr_base 541.9 KiB Installing dependencies: flexiblas x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 48.5 KiB flexiblas-netlib x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.7 MiB flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43.3 KiB libgfortran x86_64 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB libquadmath x86_64 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 325.9 KiB openblas x86_64 0.3.28-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.6 KiB openblas-openmp x86_64 0.3.28-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.3 MiB python3-numpy-f2py x86_64 1:2.2.0-4.fc42 copr_base 2.0 MiB Transaction Summary: Installing: 13 packages Total size of inbound packages is 26 MiB. Need to download 4 MiB. After this operation, 135 MiB extra will be used (install 135 MiB, remove 0 B). [1/2] python3-numpy-1:2.2.0-4.fc42.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/3] python3-pip-0:24.3.1-1.fc42.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [3/4] python3-setuptools-0:74.1.3-4.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [4/6] flexiblas-netlib-0:3.4.4-3.fc41.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [5/7] python3-numpy-f2py-1:2.2.0-4.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [6/8] flexiblas-0:3.4.4-3.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [7/9] flexiblas-openblas-openmp-0:3.4.4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/10] libgfortran-0:14.2.1-6.fc42.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/11] libquadmath-0:14.2.1-6.fc42.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [10/12] openblas-openmp-0:0.3.28-2.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [11/13] openblas-0:0.3.28-2.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [12/13] python3-wheel-1:0.45.1-2.fc42.n 100% | 10.4 MiB/s | 159.6 KiB | 00m00s [13/13] python3-cython-0:3.0.11-1.fc41. 100% | 106.0 MiB/s | 3.8 MiB | 00m00s -------------------------------------------------------------------------------- [13/13] Total 100% | 71.0 MiB/s | 4.0 MiB | 00m00s Running transaction [ 1/15] Verify package files 100% | 152.0 B/s | 13.0 B | 00m00s [ 2/15] Prepare transaction 100% | 361.0 B/s | 13.0 B | 00m00s [ 3/15] Installing libgfortran-0:14.2.1 100% | 380.6 MiB/s | 3.0 MiB | 00m00s [ 4/15] Installing openblas-0:0.3.28-2. 100% | 0.0 B/s | 108.3 KiB | 00m00s [ 5/15] Installing openblas-openmp-0:0. 100% | 623.6 MiB/s | 39.3 MiB | 00m00s [ 6/15] Installing libquadmath-0:14.2.1 100% | 319.5 MiB/s | 327.2 KiB | 00m00s [ 7/15] Installing flexiblas-0:3.4.4-3. 100% | 0.0 B/s | 49.7 KiB | 00m00s [ 8/15] Installing flexiblas-openblas-o 100% | 0.0 B/s | 44.1 KiB | 00m00s [ 9/15] Installing flexiblas-netlib-0:3 100% | 444.4 MiB/s | 10.7 MiB | 00m00s [10/15] Installing python3-numpy-f2py-1 100% | 172.3 MiB/s | 2.1 MiB | 00m00s [11/15] Installing python3-numpy-1:2.2. 100% | 406.7 MiB/s | 41.1 MiB | 00m00s [12/15] Installing python3-wheel-1:0.45 100% | 109.8 MiB/s | 562.0 KiB | 00m00s [13/15] Installing python3-setuptools-0 100% | 244.5 MiB/s | 8.6 MiB | 00m00s [14/15] Installing python3-pip-0:24.3.1 100% | 237.1 MiB/s | 11.6 MiB | 00m00s [15/15] Installing python3-cython-0:3.0 100% | 170.9 MiB/s | 18.3 MiB | 00m00s Warning: skipped OpenPGP checks for 13 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1734652800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.h9H7bB + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling Cython from build-system.requires Requirement satisfied: Cython (installed: Cython 3.0.11) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.0) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. Compiling neat/tools/simtools/net/netsim.pyx because it changed. [1/1] Cythonizing neat/tools/simtools/net/netsim.pyx running egg_info creating neatdend.egg-info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt writing manifest file 'neatdend.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/neatdend-0.9.1.dist-info' Handling numpy>=1.20.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: numpy>=1.20.2 (installed: numpy 2.2.0) Handling matplotlib>=3.4.1 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: matplotlib>=3.4.1 Handling cython>=3.0.0 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: cython>=3.0.0 (installed: cython 3.0.11) Handling scipy>=1.6.3 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: scipy>=1.6.3 Handling sympy>=1.7.1 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: sympy>=1.7.1 Handling pytest>=5.3.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: pytest>=5.3.2 (installed: pytest 8.3.4) Handling scikit-learn>=0.24.2 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: scikit-learn>=0.24.2 + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires + rm -rfv neatdend-0.9.1.dist-info/ removed 'neatdend-0.9.1.dist-info/top_level.txt' removed 'neatdend-0.9.1.dist-info/METADATA' removed 'neatdend-0.9.1.dist-info/LICENSE.txt' removed directory 'neatdend-0.9.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-21.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 100.6 KiB/s | 27.4 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 201.5 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 93.9 KiB/s | 2.2 KiB | 00m00s Repositories loaded. Package "gcc-14.2.1-6.fc42.x86_64" is already installed. Package "gcc-c++-14.2.1-6.fc42.x86_64" is already installed. Package "git-core-2.47.1-1.fc42.x86_64" is already installed. Package "neuron-devel-8.2.2-11.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.x86_64" is already installed. Package "python3-neuron-8.2.2-11.fc41.x86_64" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-cython-3.0.11-1.fc41.x86_64" is already installed. Package "python3-cython-3.0.11-1.fc41.x86_64" is already installed. Package "python3-numpy-1:2.2.0-4.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.0-4.fc42.x86_64" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-wheel-1:0.45.1-2.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-matplotlib x86_64 3.9.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.0 MiB python3-scikit-learn x86_64 1.6.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 56.2 MiB python3-scipy x86_64 1.14.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 66.8 MiB python3-sympy x86_64 1.13.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.3 MiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB cairo x86_64 1.18.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB default-fonts-core-sans noarch 4.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 KiB dejavu-sans-fonts noarch 2.37-24.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.5 MiB fontconfig x86_64 2.15.0-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 791.9 KiB fonts-filesystem noarch 1:2.0.5-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B freetype x86_64 2.13.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 850.5 KiB fribidi x86_64 1.0.16-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 194.5 KiB glib2 x86_64 2.83.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.6 MiB gnutls x86_64 3.8.8-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB google-noto-fonts-common noarch 20240901-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.5 KiB google-noto-sans-vf-fonts noarch 20240901-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB graphite2 x86_64 1.3.14-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.0 KiB harfbuzz x86_64 10.1.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB jbigkit-libs x86_64 2.1-30.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 117.6 KiB lcms2 x86_64 2.16-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 424.9 KiB libXft x86_64 2.3.8-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 164.5 KiB libXrender x86_64 0.9.12-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 48.8 KiB libimagequant x86_64 4.0.3-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 666.7 KiB libjpeg-turbo x86_64 3.0.4-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 789.1 KiB liblerc x86_64 4.0.0-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.5 KiB libpng x86_64 2:1.6.44-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 245.8 KiB libqhull_r x86_64 1:8.0.2-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 483.4 KiB libraqm 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 821.5 KiB python3-cycler noarch 0.11.0-14.fc42 copr_base 37.6 KiB python3-dateutil noarch 1:2.8.2-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 879.2 KiB python3-fonttools x86_64 4.55.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18.0 MiB python3-idna noarch 3.10-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 628.0 KiB python3-joblib noarch 1.4.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB python3-kiwisolver x86_64 1.4.7-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 153.9 KiB python3-matplotlib-data noarch 3.9.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 741.5 KiB python3-matplotlib-data-fonts noarch 3.9.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.9 MiB python3-matplotlib-tk x86_64 3.9.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 256.4 KiB python3-mpmath noarch 1.3.0-11.fc42 copr_base 5.2 MiB python3-olefile noarch 0.47-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 340.4 KiB python3-pillow x86_64 11.0.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 MiB python3-pillow-tk x86_64 11.0.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 73.0 KiB python3-platformdirs noarch 4.2.2-3.fc42 copr_base 168.4 KiB python3-pooch noarch 1.8.2-4.fc42 copr_base 625.5 KiB python3-pyparsing noarch 3.1.2-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-requests noarch 2.32.3-3.fc42 copr_base 485.8 KiB python3-six noarch 1.16.0-25.fc42 copr_base 117.9 KiB python3-threadpoolctl noarch 3.5.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.8 KiB python3-tkinter x86_64 3.13.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB python3-urllib3 noarch 2.2.3-5.fc42 copr_base 1.0 MiB tcl x86_64 1:8.6.15-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.2 MiB tk x86_64 1:8.6.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.6 MiB xml-common noarch 0.6.3-65.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB Transaction Summary: Installing: 61 packages Total size of inbound packages is 71 MiB. Need to download 71 MiB. After this operation, 315 MiB extra will be used (install 315 MiB, remove 0 B). [ 1/61] python3-matplotlib-0:3.9.4-2.fc 100% | 89.3 MiB/s | 4.5 MiB | 00m00s [ 2/61] python3-scikit-learn-0:1.6.0-1. 100% | 136.0 MiB/s | 10.5 MiB | 00m00s [ 3/61] python3-scipy-0:1.14.1-2.fc42.x 100% | 118.9 MiB/s | 16.5 MiB | 00m00s [ 4/61] python3-pooch-0:1.8.2-4.fc42.no 100% | 24.8 MiB/s | 126.9 KiB | 00m00s [ 5/61] python3-joblib-0:1.4.2-3.fc41.n 100% | 43.1 MiB/s | 529.1 KiB | 00m00s [ 6/61] python3-threadpoolctl-0:3.5.0-4 100% | 5.4 MiB/s | 44.4 KiB | 00m00s [ 7/61] python3-sympy-0:1.13.3-1.fc42.x 100% | 109.3 MiB/s | 14.7 MiB | 00m00s [ 8/61] dejavu-sans-fonts-0:2.37-24.fc4 100% | 57.6 MiB/s | 1.3 MiB | 00m00s [ 9/61] freetype-0:2.13.3-1.fc42.x86_64 100% | 66.6 MiB/s | 409.2 KiB | 00m00s [10/61] python3-mpmath-0:1.3.0-11.fc42. 100% | 8.8 MiB/s | 1.1 MiB | 00m00s [11/61] python3-cairo-0:1.25.1-5.fc41.x 100% | 13.5 MiB/s | 124.6 KiB | 00m00s [12/61] libqhull_r-1:8.0.2-5.fc41.x86_6 100% | 14.1 MiB/s | 201.8 KiB | 00m00s [13/61] python3-contourpy-0:1.3.1-1.fc4 100% | 26.2 MiB/s | 268.6 KiB | 00m00s [14/61] python3-dateutil-1:2.8.2-16.fc4 100% | 56.8 MiB/s | 349.0 KiB | 00m00s [15/61] python3-kiwisolver-0:1.4.7-1.fc 100% | 10.9 MiB/s | 66.7 KiB | 00m00s [16/61] python3-cycler-0:0.11.0-14.fc42 100% | 1.2 MiB/s | 21.8 KiB | 00m00s [17/61] python3-fonttools-0:4.55.2-1.fc 100% | 143.1 MiB/s | 2.9 MiB | 00m00s [18/61] python3-matplotlib-tk-0:3.9.4-2 100% | 15.0 MiB/s | 107.5 KiB | 00m00s [19/61] python3-matplotlib-data-0:3.9.4 100% | 41.4 MiB/s | 509.3 KiB | 00m00s [20/61] python3-pyparsing-0:3.1.2-7.fc4 100% | 52.8 MiB/s | 270.3 KiB | 00m00s [21/61] python3-six-0:1.16.0-25.fc42.no 100% | 20.5 MiB/s | 42.0 KiB | 00m00s [22/61] python3-cloudpickle-0:3.1.0-2.f 100% | 7.7 MiB/s | 47.2 KiB | 00m00s [23/61] python3-pillow-0:11.0.0-1.fc42. 100% | 93.2 MiB/s | 954.1 KiB | 00m00s [24/61] cairo-0:1.18.2-2.fc42.x86_64 100% | 84.8 MiB/s | 694.5 KiB | 00m00s [25/61] libpng-2:1.6.44-1.fc42.x86_64 100% | 23.6 MiB/s | 120.7 KiB | 00m00s [26/61] harfbuzz-0:10.1.0-2.fc42.x86_64 100% | 109.7 MiB/s | 1.0 MiB | 00m00s [27/61] fonts-filesystem-1:2.0.5-17.fc4 100% | 4.1 MiB/s | 8.5 KiB | 00m00s [28/61] libXrender-0:0.9.12-1.fc42.x86_ 100% | 8.5 MiB/s | 26.1 KiB | 00m00s [29/61] fontconfig-0:2.15.0-8.fc41.x86_ 100% | 41.8 MiB/s | 257.0 KiB | 00m00s [30/61] pixman-0:0.44.2-1.fc42.x86_64 100% | 43.9 MiB/s | 269.5 KiB | 00m00s [31/61] python3-platformdirs-0:4.2.2-3. 100% | 8.1 MiB/s | 41.5 KiB | 00m00s [32/61] lcms2-0:2.16-4.fc41.x86_64 100% | 29.3 MiB/s | 180.3 KiB | 00m00s [33/61] libimagequant-0:4.0.3-5.fc41.x8 100% | 49.0 MiB/s | 301.2 KiB | 00m00s [34/61] libjpeg-turbo-0:3.0.4-1.fc42.x8 100% | 55.9 MiB/s | 228.9 KiB | 00m00s [35/61] libraqm-0:0.10.1-1.fc42.x86_64 100% | 3.1 MiB/s | 22.4 KiB | 00m00s [36/61] libtiff-0:4.7.0-2.fc42.x86_64 100% | 35.3 MiB/s | 217.1 KiB | 00m00s [37/61] libwebp-0:1.4.0-4.fc41.x86_64 100% | 35.6 MiB/s | 292.0 KiB | 00m00s [38/61] openjpeg-0:2.5.2-4.fc42.x86_64 100% | 30.4 MiB/s | 186.6 KiB | 00m00s [39/61] python3-pillow-tk-0:11.0.0-1.fc 100% | 7.5 MiB/s | 30.9 KiB | 00m00s [40/61] python3-olefile-0:0.47-5.fc41.n 100% | 10.4 MiB/s | 74.6 KiB | 00m00s [41/61] python3-tkinter-0:3.13.1-2.fc42 100% | 38.5 MiB/s | 354.9 KiB | 00m00s [42/61] jbigkit-libs-0:2.1-30.fc41.x86_ 100% | 13.0 MiB/s | 53.3 KiB | 00m00s [43/61] python3-matplotlib-data-fonts-0 100% | 122.4 MiB/s | 2.3 MiB | 00m00s [44/61] python3-requests-0:2.32.3-3.fc4 100% | 2.8 MiB/s | 149.6 KiB | 00m00s [45/61] liblerc-0:4.0.0-7.fc41.x86_64 100% | 29.3 MiB/s | 210.3 KiB | 00m00s [46/61] fribidi-0:1.0.16-1.fc42.x86_64 100% | 10.5 MiB/s | 53.7 KiB | 00m00s [47/61] graphite2-0:1.3.14-16.fc41.x86_ 100% | 10.3 MiB/s | 95.1 KiB | 00m00s [48/61] default-fonts-core-sans-0:4.2-2 100% | 6.1 MiB/s | 25.2 KiB | 00m00s [49/61] glib2-0:2.83.0-3.fc42.x86_64 100% | 164.8 MiB/s | 3.0 MiB | 00m00s [50/61] gnutls-0:3.8.8-1.fc42.x86_64 100% | 69.7 MiB/s | 1.1 MiB | 00m00s [51/61] xml-common-0:0.6.3-65.fc41.noar 100% | 5.1 MiB/s | 31.2 KiB | 00m00s [52/61] abattis-cantarell-vf-fonts-0:0. 100% | 23.5 MiB/s | 120.2 KiB | 00m00s [53/61] python3-charset-normalizer-0:3. 100% | 16.5 MiB/s | 101.4 KiB | 00m00s [54/61] google-noto-sans-vf-fonts-0:202 100% | 72.5 MiB/s | 593.9 KiB | 00m00s [55/61] python3-idna-0:3.10-1.fc42.noar 100% | 18.2 MiB/s | 111.7 KiB | 00m00s [56/61] python3-urllib3-0:2.2.3-5.fc42. 100% | 42.3 MiB/s | 259.6 KiB | 00m00s [57/61] google-noto-fonts-common-0:2024 100% | 4.3 MiB/s | 17.8 KiB | 00m00s [58/61] tcl-1:8.6.15-6.fc42.x86_64 100% | 76.8 MiB/s | 1.1 MiB | 00m00s [59/61] tk-1:8.6.15-1.fc42.x86_64 100% | 93.0 MiB/s | 1.6 MiB | 00m00s [60/61] nettle-0:3.10-3.fc41.x86_64 100% | 38.0 MiB/s | 428.5 KiB | 00m00s [61/61] libXft-0:2.3.8-7.fc41.x86_64 100% | 7.1 MiB/s | 72.3 KiB | 00m00s -------------------------------------------------------------------------------- [61/61] Total 100% | 195.5 MiB/s | 71.0 MiB | 00m00s Running transaction [ 1/63] Verify package files 100% | 297.0 B/s | 61.0 B | 00m00s [ 2/63] Prepare 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Installing nettle-0:3.10-3.fc41 100% | 259.2 MiB/s | 796.1 KiB | 00m00s [16/63] Installing gnutls-0:3.8.8-1.fc4 100% | 361.0 MiB/s | 3.2 MiB | 00m00s [17/63] Installing glib2-0:2.83.0-3.fc4 100% | 419.1 MiB/s | 14.7 MiB | 00m00s [18/63] Installing google-noto-fonts-co 100% | 0.0 B/s | 18.3 KiB | 00m00s [19/63] Installing google-noto-sans-vf- 100% | 312.2 MiB/s | 1.2 MiB | 00m00s [20/63] Installing default-fonts-core-s 100% | 17.8 MiB/s | 18.2 KiB | 00m00s [21/63] Installing python3-charset-norm 100% | 161.0 MiB/s | 329.8 KiB | 00m00s [22/63] Installing python3-requests-0:2 100% | 60.8 MiB/s | 497.9 KiB | 00m00s [23/63] Installing xml-common-0:0.6.3-6 100% | 79.2 MiB/s | 81.1 KiB | 00m00s [24/63] Installing graphite2-0:1.3.14-1 100% | 189.6 MiB/s | 194.1 KiB | 00m00s [25/63] Installing harfbuzz-0:10.1.0-2. 100% | 332.1 MiB/s | 2.7 MiB | 00m00s [26/63] Installing freetype-0:2.13.3-1. 100% | 277.4 MiB/s | 852.2 KiB | 00m00s [27/63] Installing fontconfig-0:2.15.0- 100% | 792.1 KiB/s | 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1734652800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.j2sCCJ + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling Cython from build-system.requires Requirement satisfied: Cython (installed: Cython 3.0.11) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.0) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running egg_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/neatdend-0.9.1.dist-info' Handling numpy>=1.20.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: numpy>=1.20.2 (installed: numpy 2.2.0) Handling matplotlib>=3.4.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: matplotlib>=3.4.1 (installed: matplotlib 3.9.4) Handling cython>=3.0.0 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: cython>=3.0.0 (installed: cython 3.0.11) Handling scipy>=1.6.3 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scipy>=1.6.3 (installed: scipy 1.14.1) Handling sympy>=1.7.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: sympy>=1.7.1 (installed: sympy 1.13.3) Handling pytest>=5.3.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: pytest>=5.3.2 (installed: pytest 8.3.4) Handling scikit-learn>=0.24.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scikit-learn>=0.24.2 (installed: scikit-learn 1.6.0) + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires + rm -rfv neatdend-0.9.1.dist-info/ removed 'neatdend-0.9.1.dist-info/top_level.txt' removed 'neatdend-0.9.1.dist-info/METADATA' removed 'neatdend-0.9.1.dist-info/LICENSE.txt' removed directory 'neatdend-0.9.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-21.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 166.1 KiB/s | 2.2 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 182.3 KiB/s | 3.8 KiB | 00m00s fedora 100% | 101.3 KiB/s | 27.4 KiB | 00m00s Repositories loaded. Package "gcc-14.2.1-6.fc42.x86_64" is already installed. Package "gcc-c++-14.2.1-6.fc42.x86_64" is already installed. Package "git-core-2.47.1-1.fc42.x86_64" is already installed. Package "neuron-devel-8.2.2-11.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.x86_64" is already installed. Package "python3-neuron-8.2.2-11.fc41.x86_64" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-cython-3.0.11-1.fc41.x86_64" is already installed. Package "python3-cython-3.0.11-1.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.4-2.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.0-4.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.0-4.fc42.x86_64" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-scikit-learn-1.6.0-1.fc42.x86_64" is already installed. Package "python3-scipy-1.14.1-2.fc42.x86_64" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-sympy-1.13.3-1.fc42.x86_64" is already installed. Package "python3-wheel-1:0.45.1-2.fc42.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1734652800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.3Z6XPZ + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling Cython from build-system.requires Requirement satisfied: Cython (installed: Cython 3.0.11) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.0) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running egg_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/neatdend-0.9.1.dist-info' Handling numpy>=1.20.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: numpy>=1.20.2 (installed: numpy 2.2.0) Handling matplotlib>=3.4.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: matplotlib>=3.4.1 (installed: matplotlib 3.9.4) Handling cython>=3.0.0 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: cython>=3.0.0 (installed: cython 3.0.11) Handling scipy>=1.6.3 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scipy>=1.6.3 (installed: scipy 1.14.1) Handling sympy>=1.7.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: sympy>=1.7.1 (installed: sympy 1.13.3) Handling pytest>=5.3.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: pytest>=5.3.2 (installed: pytest 8.3.4) Handling scikit-learn>=0.24.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scikit-learn>=0.24.2 (installed: scikit-learn 1.6.0) + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-buildrequires + rm -rfv neatdend-0.9.1.dist-info/ removed 'neatdend-0.9.1.dist-info/top_level.txt' removed 'neatdend-0.9.1.dist-info/METADATA' removed 'neatdend-0.9.1.dist-info/LICENSE.txt' removed directory 'neatdend-0.9.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ZBm0uv + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd NEAT-0.9.2 + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir Processing /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info creating /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info writing /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-txu71r2r/neatdend-0.9.1.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: neatdend Building wheel for neatdend (pyproject.toml): started Running command Building wheel for neatdend (pyproject.toml) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-cpython-313 creating build/lib.linux-x86_64-cpython-313/neat copying neat/__init__.py -> build/lib.linux-x86_64-cpython-313/neat copying neat/__version__.py -> build/lib.linux-x86_64-cpython-313/neat creating build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/compartmenttree.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/greenstree.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/morphtree.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/netree.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/phystree.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/sovtree.py -> build/lib.linux-x86_64-cpython-313/neat/trees copying neat/trees/stree.py -> build/lib.linux-x86_64-cpython-313/neat/trees creating build/lib.linux-x86_64-cpython-313/neat/tools copying neat/tools/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/tools copying neat/tools/kernelextraction.py -> build/lib.linux-x86_64-cpython-313/neat/tools creating build/lib.linux-x86_64-cpython-313/neat/tools/fittools copying neat/tools/fittools/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/tools/fittools copying neat/tools/fittools/compartmentfitter.py -> build/lib.linux-x86_64-cpython-313/neat/tools/fittools copying neat/tools/fittools/histogramsegmentation.py -> build/lib.linux-x86_64-cpython-313/neat/tools/fittools copying neat/tools/fittools/iepsolver.py -> build/lib.linux-x86_64-cpython-313/neat/tools/fittools copying neat/tools/fittools/zerofinding.py -> build/lib.linux-x86_64-cpython-313/neat/tools/fittools creating build/lib.linux-x86_64-cpython-313/neat/tools/plottools copying neat/tools/plottools/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/tools/plottools copying neat/tools/plottools/scalebars.py -> build/lib.linux-x86_64-cpython-313/neat/tools/plottools creating build/lib.linux-x86_64-cpython-313/neat/tools/simtools creating build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron copying neat/tools/simtools/neuron/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron copying neat/tools/simtools/neuron/neuronmodel.py -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron creating build/lib.linux-x86_64-cpython-313/neat/channels copying neat/channels/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/channels copying neat/channels/concmechs.py -> build/lib.linux-x86_64-cpython-313/neat/channels copying neat/channels/ionchannels.py -> build/lib.linux-x86_64-cpython-313/neat/channels copying neat/channels/writecppcode.py -> build/lib.linux-x86_64-cpython-313/neat/channels copying neat/channels/writemodfiles.py -> build/lib.linux-x86_64-cpython-313/neat/channels creating build/lib.linux-x86_64-cpython-313/neat/channels/channelcollection copying neat/channels/channelcollection/__init__.py -> build/lib.linux-x86_64-cpython-313/neat/channels/channelcollection copying neat/channels/channelcollection/channelcollection.py -> build/lib.linux-x86_64-cpython-313/neat/channels/channelcollection running egg_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'neat.tools.simtools.net' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'neat.tools.simtools.net' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'neat.tools.simtools.net' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'neat.tools.simtools.net' to be distributed and are already explicitly excluding 'neat.tools.simtools.net' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'neat.tools.simtools.neuron.mech_storage' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'neat.tools.simtools.neuron.mech_storage' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'neat.tools.simtools.neuron.mech_storage' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'neat.tools.simtools.neuron.mech_storage' to be distributed and are already explicitly excluding 'neat.tools.simtools.neuron.mech_storage' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Ionchannels.cc -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Ionchannels.h -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/NETC.cc -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/NETC.h -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Synapses.cc -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Synapses.h -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Tools.cc -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/netsim.cpp -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/netsim.pyx -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net creating build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/CaDyn.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/CaPump.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUClamp.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUClamp2.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUConductance.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUReversal.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/Shunt.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/SinClamp.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/VecStim.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/WNClamp.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/conc_ca.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/conc_ca_.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/conc_ca__.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified2.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled_prox.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_v_from_vector.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/gap.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/rel.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/release_BMK.mod -> build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/channels/compilechannels -> build/lib.linux-x86_64-cpython-313/neat/channels running build_ext building 'netsim' extension creating build/temp.linux-x86_64-cpython-313 creating build/temp.linux-x86_64-cpython-313/neat creating build/temp.linux-x86_64-cpython-313/neat/tools creating build/temp.linux-x86_64-cpython-313/neat/tools/simtools creating build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/_core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/Ionchannels.cc -o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/Ionchannels.o -w -O3 -std=gnu++11 g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/_core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/NETC.cc -o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/NETC.o -w -O3 -std=gnu++11 g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/_core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/Synapses.cc -o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/Synapses.o -w -O3 -std=gnu++11 g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/_core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/Tools.cc -o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/Tools.o -w -O3 -std=gnu++11 g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/_core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/netsim.cpp -o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/netsim.o -w -O3 -std=gnu++11 g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/Ionchannels.o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/NETC.o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/Synapses.o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/Tools.o build/temp.linux-x86_64-cpython-313/neat/tools/simtools/net/netsim.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-313/neat/netsim.cpython-313-x86_64-linux-gnu.so running build_scripts creating build/scripts-3.13 copying and adjusting neat/channels/compilechannels -> build/scripts-3.13 changing mode of build/scripts-3.13/compilechannels from 644 to 755 installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/neat copying build/lib.linux-x86_64-cpython-313/neat/__init__.py -> build/bdist.linux-x86_64/wheel/./neat copying build/lib.linux-x86_64-cpython-313/neat/__version__.py -> build/bdist.linux-x86_64/wheel/./neat creating build/bdist.linux-x86_64/wheel/neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/compartmenttree.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/greenstree.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/morphtree.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/netree.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/phystree.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/sovtree.py -> build/bdist.linux-x86_64/wheel/./neat/trees copying build/lib.linux-x86_64-cpython-313/neat/trees/stree.py -> build/bdist.linux-x86_64/wheel/./neat/trees creating build/bdist.linux-x86_64/wheel/neat/tools copying build/lib.linux-x86_64-cpython-313/neat/tools/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/tools copying build/lib.linux-x86_64-cpython-313/neat/tools/kernelextraction.py -> build/bdist.linux-x86_64/wheel/./neat/tools creating build/bdist.linux-x86_64/wheel/neat/tools/fittools copying build/lib.linux-x86_64-cpython-313/neat/tools/fittools/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/tools/fittools copying build/lib.linux-x86_64-cpython-313/neat/tools/fittools/compartmentfitter.py -> build/bdist.linux-x86_64/wheel/./neat/tools/fittools copying build/lib.linux-x86_64-cpython-313/neat/tools/fittools/histogramsegmentation.py -> build/bdist.linux-x86_64/wheel/./neat/tools/fittools copying build/lib.linux-x86_64-cpython-313/neat/tools/fittools/iepsolver.py -> build/bdist.linux-x86_64/wheel/./neat/tools/fittools copying build/lib.linux-x86_64-cpython-313/neat/tools/fittools/zerofinding.py -> build/bdist.linux-x86_64/wheel/./neat/tools/fittools creating build/bdist.linux-x86_64/wheel/neat/tools/plottools copying build/lib.linux-x86_64-cpython-313/neat/tools/plottools/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/tools/plottools copying build/lib.linux-x86_64-cpython-313/neat/tools/plottools/scalebars.py -> build/bdist.linux-x86_64/wheel/./neat/tools/plottools creating build/bdist.linux-x86_64/wheel/neat/tools/simtools creating build/bdist.linux-x86_64/wheel/neat/tools/simtools/neuron copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/neuronmodel.py -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron creating build/bdist.linux-x86_64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/CaDyn.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/CaPump.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUClamp.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUClamp2.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUConductance.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUReversal.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/Shunt.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/SinClamp.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/VecStim.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/WNClamp.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/conc_ca.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/conc_ca_.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/conc_ca__.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified2.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled_prox.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_v_from_vector.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/gap.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/rel.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/neuron/mech_storage/release_BMK.mod -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/neuron/mech_storage creating build/bdist.linux-x86_64/wheel/neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/Ionchannels.cc -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/Ionchannels.h -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/NETC.cc -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/NETC.h -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/Synapses.cc -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/Synapses.h -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/Tools.cc -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/netsim.cpp -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net copying build/lib.linux-x86_64-cpython-313/neat/tools/simtools/net/netsim.pyx -> build/bdist.linux-x86_64/wheel/./neat/tools/simtools/net creating build/bdist.linux-x86_64/wheel/neat/channels copying build/lib.linux-x86_64-cpython-313/neat/channels/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/channels copying build/lib.linux-x86_64-cpython-313/neat/channels/concmechs.py -> build/bdist.linux-x86_64/wheel/./neat/channels copying build/lib.linux-x86_64-cpython-313/neat/channels/ionchannels.py -> build/bdist.linux-x86_64/wheel/./neat/channels copying build/lib.linux-x86_64-cpython-313/neat/channels/writecppcode.py -> build/bdist.linux-x86_64/wheel/./neat/channels copying build/lib.linux-x86_64-cpython-313/neat/channels/writemodfiles.py -> build/bdist.linux-x86_64/wheel/./neat/channels creating build/bdist.linux-x86_64/wheel/neat/channels/channelcollection copying build/lib.linux-x86_64-cpython-313/neat/channels/channelcollection/__init__.py -> build/bdist.linux-x86_64/wheel/./neat/channels/channelcollection copying build/lib.linux-x86_64-cpython-313/neat/channels/channelcollection/channelcollection.py -> build/bdist.linux-x86_64/wheel/./neat/channels/channelcollection copying build/lib.linux-x86_64-cpython-313/neat/channels/compilechannels -> build/bdist.linux-x86_64/wheel/./neat/channels copying build/lib.linux-x86_64-cpython-313/neat/netsim.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./neat running install_egg_info Copying neatdend.egg-info to build/bdist.linux-x86_64/wheel/./neatdend-0.9.1-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/neatdend-0.9.1.data creating build/bdist.linux-x86_64/wheel/neatdend-0.9.1.data/scripts copying build/scripts-3.13/compilechannels -> build/bdist.linux-x86_64/wheel/neatdend-0.9.1.data/scripts changing mode of build/bdist.linux-x86_64/wheel/neatdend-0.9.1.data/scripts/compilechannels to 755 creating build/bdist.linux-x86_64/wheel/neatdend-0.9.1.dist-info/WHEEL creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-wheel-9v579gm7/.tmp-a3tg51u9/neatdend-0.9.1-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'neat/__init__.py' adding 'neat/__version__.py' adding 'neat/netsim.cpython-313-x86_64-linux-gnu.so' adding 'neat/channels/__init__.py' adding 'neat/channels/compilechannels' adding 'neat/channels/concmechs.py' adding 'neat/channels/ionchannels.py' adding 'neat/channels/writecppcode.py' adding 'neat/channels/writemodfiles.py' adding 'neat/channels/channelcollection/__init__.py' adding 'neat/channels/channelcollection/channelcollection.py' adding 'neat/tools/__init__.py' adding 'neat/tools/kernelextraction.py' adding 'neat/tools/fittools/__init__.py' adding 'neat/tools/fittools/compartmentfitter.py' adding 'neat/tools/fittools/histogramsegmentation.py' adding 'neat/tools/fittools/iepsolver.py' adding 'neat/tools/fittools/zerofinding.py' adding 'neat/tools/plottools/__init__.py' adding 'neat/tools/plottools/scalebars.py' adding 'neat/tools/simtools/net/Ionchannels.cc' adding 'neat/tools/simtools/net/Ionchannels.h' adding 'neat/tools/simtools/net/NETC.cc' adding 'neat/tools/simtools/net/NETC.h' adding 'neat/tools/simtools/net/Synapses.cc' adding 'neat/tools/simtools/net/Synapses.h' adding 'neat/tools/simtools/net/Tools.cc' adding 'neat/tools/simtools/net/netsim.cpp' adding 'neat/tools/simtools/net/netsim.pyx' adding 'neat/tools/simtools/neuron/__init__.py' adding 'neat/tools/simtools/neuron/neuronmodel.py' adding 'neat/tools/simtools/neuron/mech_storage/CaDyn.mod' adding 'neat/tools/simtools/neuron/mech_storage/CaPump.mod' adding 'neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUClamp.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUClamp2.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUConductance.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUReversal.mod' adding 'neat/tools/simtools/neuron/mech_storage/Shunt.mod' adding 'neat/tools/simtools/neuron/mech_storage/SinClamp.mod' adding 'neat/tools/simtools/neuron/mech_storage/VecStim.mod' adding 'neat/tools/simtools/neuron/mech_storage/WNClamp.mod' adding 'neat/tools/simtools/neuron/mech_storage/conc_ca.mod' adding 'neat/tools/simtools/neuron/mech_storage/conc_ca_.mod' adding 'neat/tools/simtools/neuron/mech_storage/conc_ca__.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified2.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled_prox.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_v_from_vector.mod' adding 'neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod' adding 'neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod' adding 'neat/tools/simtools/neuron/mech_storage/gap.mod' adding 'neat/tools/simtools/neuron/mech_storage/rel.mod' adding 'neat/tools/simtools/neuron/mech_storage/release_BMK.mod' adding 'neat/trees/__init__.py' adding 'neat/trees/compartmenttree.py' adding 'neat/trees/greenstree.py' adding 'neat/trees/morphtree.py' adding 'neat/trees/netree.py' adding 'neat/trees/phystree.py' adding 'neat/trees/sovtree.py' adding 'neat/trees/stree.py' adding 'neatdend-0.9.1.data/scripts/compilechannels' adding 'neatdend-0.9.1.dist-info/LICENSE.txt' adding 'neatdend-0.9.1.dist-info/METADATA' adding 'neatdend-0.9.1.dist-info/WHEEL' adding 'neatdend-0.9.1.dist-info/top_level.txt' adding 'neatdend-0.9.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for neatdend (pyproject.toml): finished with status 'done' Created wheel for neatdend: filename=neatdend-0.9.1-cp313-cp313-linux_x86_64.whl size=1663506 sha256=2779fe835f73f869da5d3afd62286c249ee79be7e013020900e365bb6d7bd25e Stored in directory: /builddir/.cache/pip/wheels/4c/52/e5/f12a0b26b7bc958a1b068dd72e437c3fd1e5ec3827dcb974e8 Successfully built neatdend + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gQV8VS + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + '[' /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build + mkdir /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd NEAT-0.9.2 ++ ls /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir/neatdend-0.9.1-cp313-cp313-linux_x86_64.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=neatdend==0.9.1 + '[' -z neatdend==0.9.1 ']' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir neatdend==0.9.1 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir Processing ./pyproject-wheeldir/neatdend-0.9.1-cp313-cp313-linux_x86_64.whl Installing collected packages: neatdend Successfully installed neatdend-0.9.1 + '[' -d /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin/compilechannels /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin/compilechannels: updating + rm -rfv /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT --record /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/RECORD --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/RECORD removed '/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/REQUESTED removed '/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-21.fc42.x86_64-pyproject-record --prefix /usr -l neat + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 0.9.2-21.fc42 --unique-debug-suffix -0.9.2-21.fc42.x86_64 --unique-debug-src-base python-neatdend-0.9.2-21.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/python-neatdend-0.9.2-21.fc42.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/NETC.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/NETC.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/Synapses.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/Synapses.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/Tools.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/netsim.pyx is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/OUClamp.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/OUClamp2.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/OUConductance.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/Shunt.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/VecStim.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/WNClamp.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/conc_ca.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/conc_ca_.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/conc_ca__.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/gap.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/rel.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/release_BMK.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-21.fc42.x86_64/neat/tools/simtools/net/NETC.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-21.fc42.x86_64/neat/tools/simtools/net/NETC.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-21.fc42.x86_64/neat/tools/simtools/net/Synapses.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-21.fc42.x86_64/neat/tools/simtools/net/Synapses.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-21.fc42.x86_64/neat/tools/simtools/net/Tools.cc is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13 using python3.13 /usr/lib64/python3.13/site-packages/neat/channels/ionchannels.py:111: SyntaxWarning: invalid escape sequence '\o' /usr/lib64/python3.13/site-packages/neat/tools/fittools/compartmentfitter.py:962: SyntaxWarning: invalid escape sequence '\l' /usr/lib64/python3.13/site-packages/neat/channels/ionchannels.py:111: SyntaxWarning: invalid escape sequence '\o' /usr/lib64/python3.13/site-packages/neat/tools/fittools/compartmentfitter.py:962: SyntaxWarning: invalid escape sequence '\l' /usr/lib64/python3.13/site-packages/neat/trees/netree.py:21: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/neat/trees/netree.py:21: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2405: SyntaxWarning: invalid escape sequence '\m' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2639: SyntaxWarning: invalid escape sequence '\m' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2405: SyntaxWarning: invalid escape sequence '\m' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2639: SyntaxWarning: invalid escape sequence '\m' Bytecompiling .py files below /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/channelcollection/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/concmechs.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/writemodfiles.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/writecppcode.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/channelcollection/__pycache__/channelcollection.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/histogramsegmentation.cpython-313.pyc: replacing with normalized version 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/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/compartmenttree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/phystree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/stree.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/netree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/sovtree.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/phystree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/__pycache__/__version__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/morphtree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/compartmenttree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/morphtree.cpython-313.opt-1.pyc: replacing with normalized version Scanned 40 directories and 135 files, processed 39 inodes, 39 modified (22 replaced + 17 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-neatdend-0.9.2-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.pLWa5L + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd NEAT-0.9.2 + mkdir testdir + pushd testdir ~/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/testdir ~/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 + PYTHONPATH=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib/python3.13/site-packages:/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages + /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/bin/compilechannels default Warning: no DISPLAY environment variable. --No graphics will be displayed. /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron Mod files: "mech/mech//CaDyn.mod" "mech/mech//CaPump.mod" "mech/mech//IKv3_1.mod" "mech/mech//INa_Ta.mod" "mech/mech//ISK.mod" "mech/mech//ITestChannel.mod" "mech/mech//ITestChannel2.mod" "mech/mech//Ih.mod" "mech/mech//NMDA_Mg_T.mod" "mech/mech//OUClamp.mod" "mech/mech//OUClamp2.mod" "mech/mech//OUConductance.mod" "mech/mech//OUReversal.mod" "mech/mech//Shunt.mod" "mech/mech//SinClamp.mod" "mech/mech//VecStim.mod" "mech/mech//WNClamp.mod" "mech/mech//conc_ca.mod" "mech/mech//conc_ca_.mod" "mech/mech//conc_ca__.mod" "mech/mech//double_exp_AMPA_NMDA.mod" "mech/mech//double_exp_AMPA_NMDA_modified.mod" "mech/mech//double_exp_AMPA_NMDA_modified2.mod" "mech/mech//double_exp_AMPA_NMDA_rescaled.mod" "mech/mech//double_exp_AMPA_NMDA_rescaled_prox.mod" "mech/mech//double_exp_AMPA_NMDA_v_from_vector.mod" "mech/mech//epsc_double_exp.mod" "mech/mech//exp_AMPA_NMDA.mod" "mech/mech//gap.mod" "mech/mech//rel.mod" "mech/mech//release_BMK.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../mech//CaDyn.mod -> NMODL ../mech//CaPump.mod -> NMODL ../mech//IKv3_1.mod Translating CaDyn.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/CaDyn.c Translating CaPump.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/CaPump.c Translating IKv3_1.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/IKv3_1.c Thread Safe Thread Safe Thread Safe -> NMODL ../mech//INa_Ta.mod -> NMODL ../mech//ISK.mod -> NMODL ../mech//ITestChannel.mod Translating INa_Ta.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/INa_Ta.c Translating ISK.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/ISK.c Translating ITestChannel.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/ITestChannel.c Thread Safe Thread Safe Thread Safe -> NMODL ../mech//ITestChannel2.mod -> NMODL ../mech//Ih.mod -> NMODL ../mech//NMDA_Mg_T.mod Translating ITestChannel2.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packageTranslating Ih.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/Ih.c s/neat/tools/simtools/neuron/x86_64/ITestChannel2.c Thread Safe Translating NMDA_Mg_T.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/NMDA_Mg_T.c Notice: Use of POINTER is not thread safe. Thread Safe -> NMODL ../mech//OUClamp.mod -> NMODL ../mech//OUClamp2.mod NEURON's CVode method ignores conservation Notice: Assignment to the GLOBAL variable, "rmd2u", is not thread safe Notice: Assignment to the GLOBAL variable, "rmd2b", is not thread safe Notice: Assignment to the GLOBAL variable, "rmd1u", is not thread safe Notice: Assignment to the GLOBAL variable, "rmd1b", is not thread safe Translating OUClamp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/OUClamp.c -> NMODL ../mech//OUConductance.mod Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: This mechanism cannot be used with CVODE -> NMODL ../mech//OUReversal.mod Translating OUClamp2.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/OUClamp2.c Thread Safe Translating OUConductance.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/OUConductance.c Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: This mechanism cannot be used with CVODE -> NMODL ../mech//Shunt.mod -> NMODL ../mech//SinClamp.mod Translating OUReversal.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/OUReversal.c Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: This mechanism cannot be used with CVODE -> NMODL ../mech//VecStim.mod Translating Shunt.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/Shunt.c Translating SinClamp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/SinClamp.c Thread Safe Thread Safe -> NMODL ../mech//WNClamp.mod -> NMODL ../mech//conc_ca.mod Translating VecStim.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/VecStim.c Notice: VERBATIM blocks are not thread safe -> NMODL ../mech//conc_ca_.mod Translating conc_ca.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/conc_ca.c Translating WNClamp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/WNClamp.c Thread Safe Translating conc_ca_.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neaThread Safe t/tools/simtools/neuron/x86_64/conc_ca_.c -> NMODL ../mech//conc_ca__.mod Thread Safe -> NMODL ../mech//double_exp_AMPA_NMDA.mod -> NMODL ../mech//double_exp_AMPA_NMDA_modified.mod -> NMODL ../mech//double_exp_AMPA_NMDA_modified2.mod Translating conc_ca__.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/conc_ca__.c Thread Safe Translating double_exp_AMPA_NMDA.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/double_exp_AMPA_NMDA.c Translating double_exp_AMPA_NMDA_modified.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/double_exp_AMPA_NMDA_modified.c Translating double_exp_AMPA_NMDA_modified2.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/double_exp_AMPA_NMDA_modified2.c Thread Safe -> NMODL ../mech//double_exp_AMPA_NMDA_rescaled.mod Thread Safe Thread Safe -> NMODL ../mech//double_exp_AMPA_NMDA_rescaled_prox.mod -> NMODL ../mech//double_exp_AMPA_NMDA_v_from_vector.mod -> NMODL ../mech//epsc_double_exp.mod Translating double_exp_AMPA_NMDA_rescaled.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/double_exp_AMPA_NMDA_rescaled.c Thread Safe Translating double_exp_AMPA_NMDA_rescaled_prox.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/double_exp_AMPA_NMDA_rescaled_prox.c Translating epsc_double_exp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packaThread Safe ges/neat/tools/simtools/neuron/x86_64/epsc_double_exp.c -> NMODL ../mech//exp_AMPA_NMDA.mod Translating double_exp_AMPA_NMDA_v_from_vector.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/double_exp_AMPA_NMDA_v_from_vector.c Thread Safe Thread Safe -> NMODL ../mech//gap.mod Translating exp_AMPA_NMDA.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/exp_AMPA_NMDA.c -> NMODL ../mech//release_BMK.mod -> NMODL ../mech//rel.mod Thread Safe Translating gap.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/gap.c Notice: Use of POINTER is not thread safe. Translating rel.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/too -> Compiling CaDyn.c ls/simtools/neuron/x86_64/rel.c Translating release_BMK.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64/release_BMK.c Thread Safe Thread Safe -> Compiling CaPump.c -> Compiling IKv3_1.c -> Compiling INa_Ta.c -> Compiling ISK.c -> Compiling ITestChannel.c -> Compiling ITestChannel2.c -> Compiling Ih.c -> Compiling NMDA_Mg_T.c -> Compiling OUClamp.c -> Compiling OUClamp2.c -> Compiling OUConductance.c -> Compiling OUReversal.c -> Compiling Shunt.c -> Compiling SinClamp.c -> Compiling VecStim.c -> Compiling WNClamp.c -> Compiling conc_ca.c -> Compiling conc_ca_.c -> Compiling conc_ca__.c -> Compiling double_exp_AMPA_NMDA.c -> Compiling double_exp_AMPA_NMDA_modified.c -> Compiling double_exp_AMPA_NMDA_modified2.c -> Compiling double_exp_AMPA_NMDA_rescaled.c -> Compiling double_exp_AMPA_NMDA_rescaled_prox.c -> Compiling double_exp_AMPA_NMDA_v_from_vector.c -> Compiling epsc_double_exp.c -> Compiling exp_AMPA_NMDA.c -> Compiling gap.c -> Compiling rel.c -> Compiling release_BMK.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext Successfully created x86_64/special --- writing channels from /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/channelcollection/ to /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ Reading channels from: __init__ Reading channels from: channelcollection - write .mod file for: Kv3_1 - write .mod file for: Na_Ta - write .mod file for: SK - write .mod file for: TestChannel - write .mod file for: TestChannel2 - write .mod file for: h + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest ../ ============================= test session starts ============================== platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 rootdir: /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 configfile: pyproject.toml collected 80 items ../tests/test_cnet.py ..... [ 6%] ../tests/test_compartmentfitter.py .......... [ 18%] ../tests/test_compartmenttree.py ......... [ 30%] ../tests/test_greenstree.py .. [ 32%] ../tests/test_ionchannels.py .... [ 37%] ../tests/test_morphtree.py .................. [ 60%] ../tests/test_net.py ..... [ 66%] ../tests/test_neurontree.py ....... [ 75%] ../tests/test_phystree.py .... [ 80%] ../tests/test_sovtree.py ... [ 83%] ../tests/test_stree.py ............. [100%] =============================== warnings summary =============================== tests/test_cnet.py: 1 warning tests/test_compartmentfitter.py: 70 warnings tests/test_neurontree.py: 240 warnings /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/neuronmodel.py:763: DeprecationWarning: neuron.run(tstop) is deprecated; use h.stdinit() and h.continuerun(tstop) instead neuron.run(t_max + self.t_calibrate) tests/test_net.py::TestNET::testKernels /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/netree.py:155: RuntimeWarning: invalid value encountered in divide return np.sum(self.c[:,None]*1e3 / (self.a[:,None]*1e3 + s_arr[None,:]), 0) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ====================== 80 passed, 312 warnings in 48.59s ======================= + popd ~/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 + rm -rf find /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/CaDyn.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/CaPump.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/IKv3_1.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/INa_Ta.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ISK.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ITestChannel.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ITestChannel2.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/Ih.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/NMDA_Mg_T.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUClamp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUClamp2.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUConductance.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUReversal.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/Shunt.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/SinClamp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/VecStim.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/WNClamp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/conc_ca.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/conc_ca_.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/conc_ca__.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_modified.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_modified2.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_rescaled.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_rescaled_prox.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_v_from_vector.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/epsc_double_exp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/exp_AMPA_NMDA.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/gap.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/rel.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/release_BMK.mod + rm -rf find /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-neatdend-0.9.2-21.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.gCuOEj + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + DOCDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/README.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/CODE_OF_CONDUCT.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/CONTRIBUTING.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/CONTRIBUTORS.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-neatdend = 0.9.2-21.fc42 python3-neatdend = 0.9.2-21.fc42 python3-neatdend(x86-64) = 0.9.2-21.fc42 python3.13-neatdend = 0.9.2-21.fc42 python3.13dist(neatdend) = 0.9.1 python3dist(neatdend) = 0.9.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(cython) >= 3 python3.13dist(matplotlib) >= 3.4.1 python3.13dist(numpy) >= 1.20.2 python3.13dist(pytest) >= 5.3.2 python3.13dist(scikit-learn) >= 0.24.2 python3.13dist(scipy) >= 1.6.3 python3.13dist(sympy) >= 1.7.1 rtld(GNU_HASH) Processing files: python-neatdend-debugsource-0.9.2-21.fc42.x86_64 Provides: python-neatdend-debugsource = 0.9.2-21.fc42 python-neatdend-debugsource(x86-64) = 0.9.2-21.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-neatdend-debuginfo-0.9.2-21.fc42.x86_64 Provides: debuginfo(build-id) = d72f340696dbc1d8bcffa2561fd2be768e742598 python-neatdend-debuginfo = 0.9.2-21.fc42 python3-neatdend-debuginfo = 0.9.2-21.fc42 python3-neatdend-debuginfo(x86-64) = 0.9.2-21.fc42 python3.13-neatdend-debuginfo = 0.9.2-21.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-neatdend-debugsource(x86-64) = 0.9.2-21.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-21.fc42.src.rpm Wrote: /builddir/build/RPMS/python-neatdend-debugsource-0.9.2-21.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-neatdend-0.9.2-21.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-neatdend-debuginfo-0.9.2-21.fc42.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.WTDSwE + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + test -d /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-neatdend-0.9.2-build + rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-neatdend-0.9.2-21.fc42.src.rpm Finish: build phase for python-neatdend-0.9.2-21.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1734789770.650529/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/python-neatdend-0.9.2-21.fc42.src.rpm) Config(child) 1 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python-neatdend", "epoch": null, "version": "0.9.2", "release": "21.fc42", "arch": "src" }, { "name": "python-neatdend-debugsource", "epoch": null, "version": "0.9.2", "release": "21.fc42", "arch": "x86_64" }, { "name": "python3-neatdend", "epoch": null, "version": "0.9.2", "release": "21.fc42", "arch": "x86_64" }, { "name": "python3-neatdend-debuginfo", "epoch": null, "version": "0.9.2", "release": "21.fc42", "arch": "x86_64" } ] } RPMResults finished