Mock Version: 2.12 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/rubygem-genevalidator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-i686-1632343754.787511/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.rj6z1i9g:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.rj6z1i9g:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '138d993293c34333b2a8475738551e07', '-D', '/var/lib/mock/fedora-rawhide-i686-1632343754.787511/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.rj6z1i9g:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/rubygem-genevalidator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1631491200 Wrote: /builddir/build/SRPMS/rubygem-genevalidator-2.1.5-1.fc36.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/rubygem-genevalidator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-i686-1632343754.787511/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.rj6z1i9g:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.rj6z1i9g:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '46361e803edf4208b516fb0adf0d74c9', '-D', '/var/lib/mock/fedora-rawhide-i686-1632343754.787511/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.rj6z1i9g:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/rubygem-genevalidator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1631491200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ggcPoC + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf genevalidator-2.1.5 + /usr/bin/gem unpack /builddir/build/SOURCES/genevalidator-2.1.5.gem Unpacked gem: '/builddir/build/BUILD/genevalidator-2.1.5' + /usr/bin/gem spec /builddir/build/SOURCES/genevalidator-2.1.5.gem --ruby + STATUS=0 + '[' 0 -ne 0 ']' + cd genevalidator-2.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.axNVCr + umask 022 + cd /builddir/build/BUILD + cd genevalidator-2.1.5 + gem build ../genevalidator-2.1.5.gemspec WARNING: license value 'AGPL' is invalid. Use a license identifier from http://spdx.org/licenses or 'Nonstandard' for a nonstandard license. Did you mean 'NGPL'? WARNING: prerelease dependency on genevalidatorapp (~> 2.1.4s) is not recommended WARNING: See https://guides.rubygems.org/specification-reference/ for help Successfully built RubyGem Name: genevalidator Version: 2.1.5 File: genevalidator-2.1.5.gem + mkdir -p ./usr/share/gems + CONFIGURE_ARGS='--with-cflags='\''-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'\'' --with-cxxflags='\''-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'\'' --with-ldflags='\''-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 '\'' ' + gem install -V --local --build-root . --force --document=ri,rdoc genevalidator-2.1.5.gem WARNING: You build with buildroot. Build root: /builddir/build/BUILD/genevalidator-2.1.5 Bin dir: /builddir/build/BUILD/genevalidator-2.1.5/usr/bin Gem home: /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems Plugins dir: /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/plugins /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/.gitignore /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/.ruby-version /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/.travis.yml /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/Gemfile /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/Gemfile.lock /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/LICENCE.txt /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/README.md /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/Rakefile /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/gv_results.slim /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/css/gv.compiled.min.css /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/fonts/FontAwesome.otf /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/fonts/fontawesome-webfont.eot /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/fonts/fontawesome-webfont.svg /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/fonts/fontawesome-webfont.ttf /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/fonts/fontawesome-webfont.woff /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/img/gene.png /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/js/gv.compiled.min.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/html_files/json/.gitkeep /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/css/bootstrap.min.css /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/css/font-awesome.min.css /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/css/style.css /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/bootstrap.min.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/d3.v3.min.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/jquery-2.1.1.min.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/jquery.tablesorter.min.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/plots.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/script.js /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/bin/genevalidator /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/exemplar_data/README.md /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/exemplar_data/mrna_data.fa /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/exemplar_data/protein_data.fa /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/genevalidator.gemspec /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/install.sh /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/arg_validation.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/blast.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/clusterization.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/exceptions.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/ext/array.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/get_raw_sequences.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/hsp.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/json_to_gv_results.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/output.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/output_files.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/pool.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/query.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/tabular_parser.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_alignment.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_blast_reading_frame.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_duplication.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_gene_merge.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_length_cluster.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_length_rank.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_maker_qi.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_open_reading_frame.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_report.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/validation_test.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/lib/genevalidator/version.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/Readme.md /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/overall.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_all_validations.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_blast.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_clusterization.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_clusterization_2d.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_extended_array_methods.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.blast_tab6 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.blast_tab7 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.blast_xml /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.blast_xml.index /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.fa /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.raw_seq /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_mrna/mrna.raw_seq.idx /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.blast_tab6 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.blast_tab7 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.blast_xml /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.blast_xml.index /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.fa /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.raw_seq /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/all_validations_prot/prot.raw_seq.idx /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/mixed_type.fasta /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/ncbi_mrna.tab.20 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/ncbi_mrna.xml.20 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/output.tab.6 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/output.tab.6.mixed /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/output.tab.7 /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/output.xml /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/test_sequences.fasta /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/test_sequences.fasta.blast_xml /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/test_sequences.fasta.blast_xml.index /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/test_sequences.fasta.blast_xml.raw_seq /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/test_sequences.fasta.blast_xml.raw_seq.idx /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_files/test_validations.fasta /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_helper.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_query.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_validation_open_reading_frame.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5/test/test_validations.rb /builddir/build/BUILD/genevalidator-2.1.5/usr/bin/genevalidator ---------------------------------------------------------------------------- Thank you for validating your gene predictions with GeneValidator! ==> To launch GeneValidator execute 'genevalidator' from command line. genevalidator [OPTIONAL ARGUMENTS] INPUT_FILE See 'genevalidator --help' for more information ==> To launch GeneValidator as a web application execute 'genevalidator' from command line. genevalidator app [OPTIONAL ARGUMENTS] See 'genevalidator app --help' for more information ==> Visit https://wurmlab.github.io/tools/genevalidator/ for more information. ---------------------------------------------------------------------------- Successfully installed genevalidator-2.1.5 Parsing documentation for genevalidator-2.1.5 Parsing sources... 3% [ 1/26] lib/genevalidator.rb 7% [ 2/26] lib/genevalidator/arg_validation.rb 11% [ 3/26] lib/genevalidator/blast.rb 15% [ 4/26] lib/genevalidator/clusterization.rb 19% [ 5/26] lib/genevalidator/exceptions.rb 23% [ 6/26] lib/genevalidator/ext/array.rb 26% [ 7/26] lib/genevalidator/get_raw_sequences.rb 30% [ 8/26] lib/genevalidator/hsp.rb 34% [ 9/26] lib/genevalidator/json_to_gv_results.rb 38% [10/26] lib/genevalidator/output.rb 42% [11/26] lib/genevalidator/output_files.rb 46% [12/26] lib/genevalidator/pool.rb 50% [13/26] lib/genevalidator/query.rb 53% [14/26] lib/genevalidator/tabular_parser.rb 57% [15/26] lib/genevalidator/validation.rb 61% [16/26] lib/genevalidator/validation_alignment.rb 65% [17/26] lib/genevalidator/validation_blast_reading_frame.rb 69% [18/26] lib/genevalidator/validation_duplication.rb 73% [19/26] lib/genevalidator/validation_gene_merge.rb 76% [20/26] lib/genevalidator/validation_length_cluster.rb 80% [21/26] lib/genevalidator/validation_length_rank.rb 84% [22/26] lib/genevalidator/validation_maker_qi.rb 88% [23/26] lib/genevalidator/validation_open_reading_frame.rb 92% [24/26] lib/genevalidator/validation_report.rb 96% [25/26] lib/genevalidator/validation_test.rb 100% [26/26] lib/genevalidator/version.rb Installing ri documentation for genevalidator-2.1.5 Installing darkfish documentation for genevalidator-2.1.5 Done installing documentation for genevalidator after 1 seconds 1 gem installed + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.IzPGms + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386 ++ dirname /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386 + cd genevalidator-2.1.5 + mkdir -p /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386/usr/share/gems + cp -a ./usr/share/gems/build_info ./usr/share/gems/cache ./usr/share/gems/doc ./usr/share/gems/extensions ./usr/share/gems/gems ./usr/share/gems/plugins ./usr/share/gems/specifications /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386/usr/share/gems/ + mkdir -p /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386/usr/bin + cp -a ./usr/bin/genevalidator /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386/usr/bin/ + find /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386/usr/share/gems/gems/genevalidator-2.1.5/bin -type f + xargs chmod a+x + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.1.5-1.fc36 --unique-debug-suffix -2.1.5-1.fc36.i386 --unique-debug-src-base rubygem-genevalidator-2.1.5-1.fc36.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/genevalidator-2.1.5 + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/share/gems/gems/genevalidator-2.1.5/test/overall.rb from /usr/bin/env ruby to #!/usr/bin/ruby mangling shebang in /usr/share/gems/gems/genevalidator-2.1.5/install.sh from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/share/gems/gems/genevalidator-2.1.5/bin/genevalidator from /usr/bin/env ruby to #!/usr/bin/ruby *** WARNING: ./usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/js/jquery.tablesorter.min.js is executable but has no shebang, removing executable bit *** WARNING: ./usr/share/gems/gems/genevalidator-2.1.5/aux/source_assets/css/bootstrap.min.css is executable but has no shebang, removing executable bit + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.BBpO1q + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/genevalidator-2.1.5/usr/share/gems/gems/genevalidator-2.1.5 ~/build/BUILD/genevalidator-2.1.5 ~/build/BUILD/genevalidator-2.1.5 + cd genevalidator-2.1.5 + pushd ./usr/share/gems/gems/genevalidator-2.1.5 + popd + RPM_EC=0 ++ jobs -p + exit 0 Processing files: rubygem-genevalidator-2.1.5-1.fc36.noarch Provides: rubygem(genevalidator) = 2.1.5 rubygem-genevalidator = 2.1.5-1.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (rubygem(bio) >= 1.4 with rubygem(bio) < 2) (rubygem(bio-blastxmlparser) >= 2.0 with rubygem(bio-blastxmlparser) < 3) (rubygem(genevalidatorapp) >= 2.1.4s with rubygem(genevalidatorapp) < 2.2) (rubygem(rack) >= 2.0 with rubygem(rack) < 3) (rubygem(slim) >= 3.0 with rubygem(slim) < 4) /usr/bin/ruby /usr/bin/sh ruby(rubygems) rubygem(mechanize) = 2.7.5 rubygem(statsample) = 2.1.0 Processing files: rubygem-genevalidator-doc-2.1.5-1.fc36.noarch Provides: rubygem-genevalidator-doc = 2.1.5-1.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/ruby Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386 Wrote: /builddir/build/RPMS/rubygem-genevalidator-2.1.5-1.fc36.noarch.rpm Wrote: /builddir/build/RPMS/rubygem-genevalidator-doc-2.1.5-1.fc36.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.IKpWNI + umask 022 + cd /builddir/build/BUILD + cd genevalidator-2.1.5 + /usr/bin/rm -rf /builddir/build/BUILDROOT/rubygem-genevalidator-2.1.5-1.fc36.i386 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0