module Bio::Alignment::FactoryTemplate::WrapInputTempfile

mix-in module

Private Instance Methods

_query_string(str, opt) click to toggle source

Performs alignment for str. The str should be a string that can be recognized by the program.

     # File lib/bio/alignment.rb
2372 def _query_string(str, opt)
2373   begin
2374     tf_in = _prepare_tempfile(str)
2375     ret = _query_local(tf_in.path, opt, nil)
2376   ensure
2377     tf_in.close(true) if tf_in
2378   end
2379   ret
2380 end