Table of Contents - abstractor-4.4.7 Documentation
Pages
- build.xml
- built-jar.properties
- README
- allclasses-frame.html
- allclasses-noframe.html
- constant-values.html
- deprecated-list.html
- help-doc.html
- index-1.html
- index-10.html
- index-11.html
- index-12.html
- index-13.html
- index-14.html
- index-15.html
- index-16.html
- index-2.html
- index-3.html
- index-4.html
- index-5.html
- index-6.html
- index-7.html
- index-8.html
- index-9.html
- index.html
- AbnerTokenizer.html
- AnnotationComparer.html
- Annotator.html
- BaselineAnnotator.html
- BaselineCueAnnotator.html
- BaselineScopeAnnotator.html
- CrfAnnotator.html
- NegexAnnotator.html
- NegexCueAnnotator.html
- NegexScopeAnnotator.html
- PosTagger.html
- AbnerTokenizer.html
- AnnotationComparer.html
- Annotator.html
- BaselineAnnotator.html
- BaselineCueAnnotator.html
- BaselineScopeAnnotator.html
- CrfAnnotator.html
- NegexAnnotator.html
- NegexCueAnnotator.html
- NegexScopeAnnotator.html
- PosTagger.html
- GenNegEx.html
- Sorter.html
- GenNegEx.html
- Sorter.html
- package-frame.html
- package-summary.html
- package-tree.html
- package-use.html
- package-frame.html
- package-summary.html
- package-tree.html
- package-use.html
- AnnotatedFilesMerger.html
- AnnotationComparerDriver.html
- BaselineDriver.html
- CrfDriver.html
- CueAndPosFilesMerger.html
- ModelTrainer.html
- NegexDriver.html
- PosTaggerDriver.html
- SentencePosTagger.html
- SentenceTagger.html
- AnnotatedFilesMerger.html
- AnnotationComparerDriver.html
- BaselineDriver.html
- CrfDriver.html
- CueAndPosFilesMerger.html
- ModelTrainer.html
- NegexDriver.html
- PosTaggerDriver.html
- SentencePosTagger.html
- SentenceTagger.html
- package-frame.html
- package-summary.html
- package-tree.html
- package-use.html
- AnnotatedSentencesIO.html
- AnnotatedSentencesIO.html
- package-frame.html
- package-summary.html
- package-tree.html
- package-use.html
- AnnotatedSentence.html
- AnnotatedSentence.html
- package-frame.html
- package-summary.html
- package-tree.html
- package-use.html
- overview-frame.html
- overview-summary.html
- overview-tree.html
- package-list
- stylesheet.css
- manifest.mf
- build-impl.xml
- genfiles.properties
- config.properties
- private.properties
- private.xml
- project.properties
- project.xml
- baseline_cue_all_both.model
- baseline_cue_all_clinical.model
- AbnerTokenizer.java
- AnnotationComparer.java
- Annotator.java
- BaselineAnnotator.java
- BaselineCueAnnotator.java
- BaselineScopeAnnotator.java
- CrfAnnotator.java
- NegexAnnotator.java
- NegexCueAnnotator.java
- NegexScopeAnnotator.java
- PosTagger.java
- GenNegEx.java
- Sorter.java
- AnnotatedFilesMerger.java
- AnnotationComparerDriver.java
- BaselineDriver.java
- CrfDriver.java
- CueAndPosFilesMerger.java
- ModelTrainer.java
- NegexDriver.java
- PosTaggerDriver.java
- SentencePosTagger.java
- SentenceTagger.java
- AnnotatedSentencesIO.java
- AnnotatedSentence.java
- Morphenglish.csv
- Morphenglish
- Topoenglish.csv
- Topoenglish
- icd-o3 readme
- custom_site_synonyms.csv
- diagnosis_categorizations.csv
- icdo3_sites_with_laterality
- site_site_categories
- abstractor_tasks.rake
- cucumber.rake
Classes and Modules
- Abstractor
- Abstractor::Abstractable
- Abstractor::Abstractable::ClassMethods
- Abstractor::Abstractable::InstanceMethods
- Abstractor::AbstractionsHelper
- Abstractor::AbstractionsHelperCustomMethods
- Abstractor::AbstractorAbstraction
- Abstractor::AbstractorAbstractionCustomMethods
- Abstractor::AbstractorAbstractionGroup
- Abstractor::AbstractorAbstractionGroupCustomMethods
- Abstractor::AbstractorAbstractionGroupMember
- Abstractor::AbstractorAbstractionGroupMemberCustomMethods
- Abstractor::AbstractorAbstractionGroupsController
- Abstractor::AbstractorAbstractionGroupsControllerCustomMethods
- Abstractor::AbstractorAbstractionSchema
- Abstractor::AbstractorAbstractionSchemaCustomMethods
- Abstractor::AbstractorAbstractionSchemaObjectValue
- Abstractor::AbstractorAbstractionSchemaObjectValueCustomMethods
- Abstractor::AbstractorAbstractionSchemaPredicateVariant
- Abstractor::AbstractorAbstractionSchemaPredicateVariantCustomMethods
- Abstractor::AbstractorAbstractionSchemaRelation
- Abstractor::AbstractorAbstractionSchemaRelationCustomMethods
- Abstractor::AbstractorAbstractionSchemasController
- Abstractor::AbstractorAbstractionSchemasControllerCustomMethods
- Abstractor::AbstractorAbstractionSource
- Abstractor::AbstractorAbstractionSourceCustomMethods
- Abstractor::AbstractorAbstractionsController
- Abstractor::AbstractorAbstractionsControllerCustomMethods
- Abstractor::AbstractorObjectType
- Abstractor::AbstractorObjectTypeCustomMethods
- Abstractor::AbstractorObjectValue
- Abstractor::AbstractorObjectValueCustomMethods
- Abstractor::AbstractorObjectValueVariant
- Abstractor::AbstractorObjectValueVariantCustomMethods
- Abstractor::AbstractorRelationType
- Abstractor::AbstractorRelationTypeCustomMethods
- Abstractor::AbstractorRuleTypeCustomMethods
- Abstractor::AbstractorSubject
- Abstractor::AbstractorSubjectCustomMethods
- Abstractor::AbstractorSubjectGroup
- Abstractor::AbstractorSubjectGroupCustomMethods
- Abstractor::AbstractorSubjectGroupMember
- Abstractor::AbstractorSubjectGroupMemberCustomMethods
- Abstractor::AbstractorSubjectRelation
- Abstractor::AbstractorSubjectRelationCustomMethods
- Abstractor::AbstractorSuggestion
- Abstractor::AbstractorSuggestionCustomMethods
- Abstractor::AbstractorSuggestionObjectValueCustomMethods
- Abstractor::AbstractorSuggestionSource
- Abstractor::AbstractorSuggestionSourceCustomMethods
- Abstractor::AbstractorSuggestionStatus
- Abstractor::AbstractorSuggestionStatusCustomMethods
- Abstractor::AbstractorSuggestionsController
- Abstractor::AbstractorSuggestionsControllerCustomMethods
- Abstractor::CustomNlpProvider
- Abstractor::Engine
- Abstractor::Enum
- Abstractor::InstallGenerator
- Abstractor::Methods
- Abstractor::Methods::Controllers
- Abstractor::Methods::Controllers::AbstractorAbstractionGroupsController
- Abstractor::Methods::Controllers::AbstractorAbstractionSchemasController
- Abstractor::Methods::Controllers::AbstractorAbstractionsController
- Abstractor::Methods::Controllers::AbstractorSuggestionsController
- Abstractor::Methods::Models
- Abstractor::Methods::Models::AbstractorAbstraction
- Abstractor::Methods::Models::AbstractorAbstraction::ClassMethods
- Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- Abstractor::Methods::Models::AbstractorAbstractionGroup
- Abstractor::Methods::Models::AbstractorAbstractionGroup::InstanceMethods
- Abstractor::Methods::Models::AbstractorAbstractionGroupMember
- Abstractor::Methods::Models::AbstractorAbstractionSchema
- Abstractor::Methods::Models::AbstractorAbstractionSchemaObjectValue
- Abstractor::Methods::Models::AbstractorAbstractionSchemaPredicateVariant
- Abstractor::Methods::Models::AbstractorAbstractionSchemaRelation
- Abstractor::Methods::Models::AbstractorAbstractionSource
- Abstractor::Methods::Models::AbstractorAbstractionSourceType
- Abstractor::Methods::Models::AbstractorIndirectSource
- Abstractor::Methods::Models::AbstractorObjectType
- Abstractor::Methods::Models::AbstractorObjectType::InstanceMethods
- Abstractor::Methods::Models::AbstractorObjectValue
- Abstractor::Methods::Models::AbstractorObjectValueVariant
- Abstractor::Methods::Models::AbstractorRelationType
- Abstractor::Methods::Models::AbstractorRuleType
- Abstractor::Methods::Models::AbstractorSection
- Abstractor::Methods::Models::AbstractorSectionNameVariant
- Abstractor::Methods::Models::AbstractorSectionType
- Abstractor::Methods::Models::AbstractorSubject
- Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- Abstractor::Methods::Models::AbstractorSubjectGroup
- Abstractor::Methods::Models::AbstractorSubjectGroup::InstanceMethods
- Abstractor::Methods::Models::AbstractorSubjectGroupMember
- Abstractor::Methods::Models::AbstractorSubjectRelation
- Abstractor::Methods::Models::AbstractorSuggestion
- Abstractor::Methods::Models::AbstractorSuggestionObjectValue
- Abstractor::Methods::Models::AbstractorSuggestionSource
- Abstractor::Methods::Models::AbstractorSuggestionStatus
- Abstractor::Methods::Models::SoftDelete
- Abstractor::NegationDetection
- Abstractor::Parser
- Abstractor::RuleType
- Abstractor::Serializers
- Abstractor::Serializers::AbstractorAbstractionSchemaSerializer
- Abstractor::Setup
- Abstractor::SuggestionObjectValue
- Abstractor::UserInterface
- Abstractor::Utility
- Regexp
- String
Methods
- ::abstractor_relative_path — Abstractor::UserInterface
- ::clear_invalid_utf8_bytes — Abstractor::NegationDetection
- ::dehumanize — Abstractor::Utility
- ::determine_suggestion_endpoint — Abstractor::CustomNlpProvider
- ::format_body_for_suggestion_endpoint — Abstractor::CustomNlpProvider
- ::highlight — Abstractor::UserInterface
- ::included — Abstractor::Abstractable
- ::included — Abstractor::Methods::Controllers::AbstractorAbstractionGroupsController
- ::included — Abstractor::Methods::Controllers::AbstractorAbstractionSchemasController
- ::included — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- ::included — Abstractor::Methods::Controllers::AbstractorSuggestionsController
- ::included — Abstractor::Methods::Models::AbstractorAbstraction
- ::included — Abstractor::Methods::Models::AbstractorAbstractionGroup
- ::included — Abstractor::Methods::Models::AbstractorAbstractionGroupMember
- ::included — Abstractor::Methods::Models::AbstractorAbstractionSchema
- ::included — Abstractor::Methods::Models::AbstractorAbstractionSchemaObjectValue
- ::included — Abstractor::Methods::Models::AbstractorAbstractionSchemaPredicateVariant
- ::included — Abstractor::Methods::Models::AbstractorAbstractionSchemaRelation
- ::included — Abstractor::Methods::Models::AbstractorAbstractionSource
- ::included — Abstractor::Methods::Models::AbstractorAbstractionSourceType
- ::included — Abstractor::Methods::Models::AbstractorIndirectSource
- ::included — Abstractor::Methods::Models::AbstractorObjectType
- ::included — Abstractor::Methods::Models::AbstractorObjectValue
- ::included — Abstractor::Methods::Models::AbstractorObjectValueVariant
- ::included — Abstractor::Methods::Models::AbstractorRelationType
- ::included — Abstractor::Methods::Models::AbstractorRuleType
- ::included — Abstractor::Methods::Models::AbstractorSection
- ::included — Abstractor::Methods::Models::AbstractorSectionNameVariant
- ::included — Abstractor::Methods::Models::AbstractorSectionType
- ::included — Abstractor::Methods::Models::AbstractorSubject
- ::included — Abstractor::Methods::Models::AbstractorSubjectGroup
- ::included — Abstractor::Methods::Models::AbstractorSubjectGroupMember
- ::included — Abstractor::Methods::Models::AbstractorSubjectRelation
- ::included — Abstractor::Methods::Models::AbstractorSuggestion
- ::included — Abstractor::Methods::Models::AbstractorSuggestionObjectValue
- ::included — Abstractor::Methods::Models::AbstractorSuggestionSource
- ::included — Abstractor::Methods::Models::AbstractorSuggestionStatus
- ::included — Abstractor::Methods::Models::SoftDelete
- ::manual_negated_match_value? — Abstractor::NegationDetection
- ::negated_match_value? — Abstractor::NegationDetection
- ::new — Abstractor::Parser
- ::new — Abstractor::Serializers::AbstractorAbstractionSchemaSerializer
- ::parse — Abstractor::NegationDetection
- ::parse_negation_scope — Abstractor::NegationDetection
- ::source_paths — Abstractor::InstallGenerator
- ::system — Abstractor::Setup
- ::table_name_prefix — Abstractor
- #abstract — Abstractor::Abstractable::InstanceMethods
- #abstract — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_canonical_name_value — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_custom_nlp_suggestion — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_custom_suggestion — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_indirect_source — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_name_value — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_nlp_suggestion — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_sentential_name_value — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_sentential_value — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_unknown — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstract_value — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstractor_abstraction_groups_by_namespace — Abstractor::Abstractable::InstanceMethods
- #abstractor_abstraction_params — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #abstractor_abstraction_schemas — Abstractor::Abstractable::ClassMethods
- #abstractor_abstractions_by_abstraction_schemas — Abstractor::Abstractable::InstanceMethods
- #abstractor_abstractions_by_abstractor_abstraction_status — Abstractor::Abstractable::InstanceMethods
- #abstractor_abstractions_by_namespace — Abstractor::Abstractable::InstanceMethods
- #abstractor_object_value? — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #abstractor_subject_group_complete? — Abstractor::Abstractable::InstanceMethods
- #abstractor_subject_groups — Abstractor::Abstractable::ClassMethods
- #abstractor_subjects — Abstractor::Abstractable::ClassMethods
- #abstractor_suggestion_params — Abstractor::Methods::Controllers::AbstractorSuggestionsController
- #accepted? — Abstractor::Methods::Models::AbstractorSuggestionStatus
- #add_abstractor_user_method — Abstractor::InstallGenerator
- #as_json — Abstractor::Serializers::AbstractorAbstractionSchemaSerializer
- #by_abstractor_abstraction_status — Abstractor::Abstractable::ClassMethods
- #by_abstractor_suggestion_type — Abstractor::Abstractable::ClassMethods
- #create — Abstractor::Methods::Controllers::AbstractorAbstractionGroupsController
- #create — Abstractor::Methods::Controllers::AbstractorSuggestionsController
- #create — Abstractor::AbstractorAbstractionGroupsControllerCustomMethods
- #create_unknown_abstractor_suggestion — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #create_unknown_abstractor_suggestion_name_only — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #date? — String
- #deleted? — Abstractor::Methods::Models::SoftDelete
- #destroy — Abstractor::Methods::Controllers::AbstractorAbstractionGroupsController
- #destroy — Abstractor::AbstractorAbstractionGroupsControllerCustomMethods
- #detect_abstractor_abstraction — Abstractor::Abstractable::InstanceMethods
- #detect_abstractor_abstraction_group — Abstractor::Abstractable::InstanceMethods
- #detect_abstractor_indirect_source — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #detect_abstractor_suggestion — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #detect_abstractor_suggestion_source — Abstractor::Methods::Models::AbstractorSuggestion
- #display_value — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #display_value — Abstractor::Methods::Models::AbstractorSuggestion
- #edit — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #edit — Abstractor::AbstractorAbstractionsControllerCustomMethods
- #find_or_create_abstractor_abstraction — Abstractor::Abstractable::InstanceMethods
- #find_or_initialize_abstractor_abstraction_group — Abstractor::Abstractable::InstanceMethods
- #find_sentence — Abstractor::Parser
- #groupable? — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #has_subtype? — Abstractor::Methods::Models::AbstractorAbstractionGroup::InstanceMethods
- #has_subtype? — Abstractor::Methods::Models::AbstractorSubjectGroup::InstanceMethods
- #index — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #index — Abstractor::AbstractorAbstractionsControllerCustomMethods
- #install_migrations — Abstractor::InstallGenerator
- #integer? — String
- #make_customizable — Abstractor::InstallGenerator
- #match — Abstractor::Parser
- #match_position — Abstractor::Parser
- #match_sentence — Abstractor::Parser
- #matching_abstractor_suggestions — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #mount_engine — Abstractor::InstallGenerator
- #must_have_members — Abstractor::Methods::Models::AbstractorAbstractionGroup::InstanceMethods
- #needs_review? — Abstractor::Methods::Models::AbstractorSuggestionStatus
- #normalize_from_method_to_sources — Abstractor::Methods::Models::AbstractorAbstractionSource
- #number? — Abstractor::Methods::Models::AbstractorObjectType::InstanceMethods
- #number_list? — Abstractor::Methods::Models::AbstractorObjectType::InstanceMethods
- #numeric? — String
- #object_variants — Abstractor::Methods::Models::AbstractorObjectValue
- #object_variants — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #pivot_abstractions — Abstractor::Abstractable::ClassMethods
- #pivot_grouped_abstractions — Abstractor::Abstractable::ClassMethods
- #predicate_variants — Abstractor::Methods::Models::AbstractorAbstractionSchema
- #prepare_abstractor_text — Abstractor::Parser
- #prepare_grouped_pivot_joins — Abstractor::Abstractable::ClassMethods
- #prepare_pivot_joins — Abstractor::Abstractable::ClassMethods
- #prepare_pivot_select — Abstractor::Abstractable::ClassMethods
- #prepare_section_name_variants — Abstractor::Methods::Models::AbstractorSection
- #prepare_token — Abstractor::Parser
- #process_soft_delete — Abstractor::Methods::Models::SoftDelete
- #range — String
- #range_all — String
- #range_all — Abstractor::Parser
- #range_of_line — String
- #regroup_sentinental_suggestions — Abstractor::Abstractable::InstanceMethods
- #rejected? — Abstractor::Methods::Models::AbstractorSuggestionStatus
- #removable? — Abstractor::Methods::Models::AbstractorAbstractionGroup::InstanceMethods
- #remove_abstractions — Abstractor::Abstractable::InstanceMethods
- #remove_unreviewed_suggestions_not_matching_suggestions — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #review_suggestions — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #scan — Abstractor::Parser
- #section_name_variants — Abstractor::Methods::Models::AbstractorSection
- #sentence_match_scan — Abstractor::Parser
- #sentence_scan — Abstractor::Parser
- #set_abstractor_abstraction — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #set_abstractor_abstraction — Abstractor::Methods::Controllers::AbstractorSuggestionsController
- #set_abstractor_abstraction — Abstractor::Methods::Models::AbstractorAbstraction::ClassMethods
- #set_abstractor_abstraction_group — Abstractor::Methods::Controllers::AbstractorAbstractionGroupsController
- #set_abstractor_abstraction_schema — Abstractor::Methods::Controllers::AbstractorAbstractionSchemasController
- #set_abstractor_suggestion — Abstractor::Methods::Controllers::AbstractorSuggestionsController
- #setup_stanford_core_nlp — Abstractor::InstallGenerator
- #show — Abstractor::Methods::Controllers::AbstractorAbstractionSchemasController
- #show — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #show — Abstractor::AbstractorAbstractionSchemasControllerCustomMethods
- #show — Abstractor::AbstractorAbstractionsControllerCustomMethods
- #sibling_suggestions — Abstractor::Methods::Models::AbstractorSuggestion
- #soft_delete — Abstractor::Methods::Models::SoftDelete
- #soft_delete! — Abstractor::Methods::Models::SoftDelete
- #soft_delete= — Abstractor::Methods::Models::SoftDelete
- #ssn? — String
- #suggest — Abstractor::Methods::Models::AbstractorSubject::InstanceMethods
- #to_boolean — String
- #unreviewed? — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #unreviewed_abstractor_suggestions — Abstractor::Methods::Models::AbstractorAbstraction::InstanceMethods
- #update — Abstractor::Methods::Controllers::AbstractorAbstractionGroupsController
- #update — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #update — Abstractor::Methods::Controllers::AbstractorSuggestionsController
- #update — Abstractor::AbstractorAbstractionsControllerCustomMethods
- #update — Abstractor::AbstractorSuggestionsControllerCustomMethods
- #update_abstraction_value — Abstractor::Methods::Models::AbstractorSuggestion
- #update_abstractor_abstraction_group_members — Abstractor::Methods::Models::AbstractorAbstractionGroup::InstanceMethods
- #update_abstractor_abstraction_other_value — Abstractor::Methods::Models::AbstractorAbstraction::ClassMethods
- #update_all — Abstractor::Methods::Controllers::AbstractorAbstractionsController
- #update_siblings_status — Abstractor::Methods::Models::AbstractorSuggestion
- #validate_subject_group_cardinality — Abstractor::Methods::Models::AbstractorAbstractionGroup::InstanceMethods