Mock Version: 1.4.13 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/macsio.spec'], chrootPath='/var/lib/mock/801340-epel-7-x86_64-1537557721.889362/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.q15rl7i5:/etc/resolv.conf']unshare_net=TrueprintOutput=True) Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '3d79ad06dd4146e6a13a36244b83ae70', '-D', '/var/lib/mock/801340-epel-7-x86_64-1537557721.889362/root', '-a', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.q15rl7i5:/etc/resolv.conf', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '-u', 'mockbuild', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/macsio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/macsio-1.0-1.el7.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/macsio.spec'], chrootPath='/var/lib/mock/801340-epel-7-x86_64-1537557721.889362/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.q15rl7i5:/etc/resolv.conf']unshare_net=TrueprintOutput=True) Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'd34477025ceb4f15a473323ddaed1518', '-D', '/var/lib/mock/801340-epel-7-x86_64-1537557721.889362/root', '-a', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.q15rl7i5:/etc/resolv.conf', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '-u', 'mockbuild', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/macsio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kuE2rJ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf MACSio-1.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/macsio-1.0.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd MACSio-1.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.OBZg3F + umask 022 + cd /builddir/build/BUILD + cd MACSio-1.0 + . /etc/profile.d/modules.sh BUILDSTDERR: ++++ /bin/ps -p 26 -ocomm= BUILDSTDERR: +++ /bin/basename sh BUILDSTDERR: ++ shell=sh BUILDSTDERR: ++ '[' -f /usr/share/Modules/init/sh ']' BUILDSTDERR: ++ . /usr/share/Modules/init/sh BUILDSTDERR: +++ MODULESHOME=/usr/share/Modules BUILDSTDERR: +++ export MODULESHOME BUILDSTDERR: +++ '[' '' = '' ']' BUILDSTDERR: +++ LOADEDMODULES= BUILDSTDERR: +++ export LOADEDMODULES BUILDSTDERR: +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 BUILDSTDERR: ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib BUILDSTDERR: ++ export LD_LIBRARY_PATH BUILDSTDERR: ++ LOADEDMODULES=mpi/openmpi-x86_64 BUILDSTDERR: ++ export LOADEDMODULES BUILDSTDERR: ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man BUILDSTDERR: ++ export MANPATH BUILDSTDERR: ++ MPI_BIN=/usr/lib64/openmpi/bin BUILDSTDERR: ++ export MPI_BIN BUILDSTDERR: ++ MPI_COMPILER=openmpi-x86_64 BUILDSTDERR: ++ export MPI_COMPILER BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR BUILDSTDERR: ++ MPI_HOME=/usr/lib64/openmpi BUILDSTDERR: ++ export MPI_HOME BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 BUILDSTDERR: ++ export MPI_INCLUDE BUILDSTDERR: ++ MPI_LIB=/usr/lib64/openmpi/lib BUILDSTDERR: ++ export MPI_LIB BUILDSTDERR: ++ MPI_MAN=/usr/share/man/openmpi-x86_64 BUILDSTDERR: ++ export MPI_MAN BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH BUILDSTDERR: ++ MPI_SUFFIX=_openmpi BUILDSTDERR: ++ export MPI_SUFFIX BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 BUILDSTDERR: ++ export MPI_SYSCONFIG BUILDSTDERR: ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin BUILDSTDERR: ++ export PATH BUILDSTDERR: ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi BUILDSTDERR: ++ export PYTHONPATH BUILDSTDERR: ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 BUILDSTDERR: ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro ' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_DOCS=ON -DENABLE_HDF5_PLUGIN=ON -DWITH_HDF5_PREFIX=/usr/lib64/openmpi -DENABLE_SILO_PLUGIN=no -DENABLE_PDB_PLUGIN=no -DHDF5_INCLUDE_DIRS=/usr/include/openmpi-x86_64 -DBUILD_DOCS=no -- The C compiler identification is GNU 4.8.5 -- The CXX compiler identification is GNU 4.8.5 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Found JSON-CWX: /usr/lib64/libjson-cwx.so -- Found MPI_C: /usr/lib64/openmpi/lib/libmpi.so -- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so -- MPI C Compile Flags: -- MPI C Include Path: /usr/include/openmpi-x86_64 -- MPI C Link Flags: -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -- MPI C Libraries: /usr/lib64/openmpi/lib/libmpi.so -- MPI CXX Compile Flags: -- MPI CXX Include Path: /usr/include/openmpi-x86_64 -- MPI CXX Link Flags: -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -- MPI CXX Libraries: /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so -- MPI Executable: /usr/lib64/openmpi/bin/mpiexec -- MPI Num Proc Flag: -np -- Found HDF5: /usr/lib64/openmpi/lib/libhdf5.so -- Configuring done -- Generating done BUILDSTDERR: CMake Warning: BUILDSTDERR: Manually-specified variables were not used by the project: BUILDSTDERR: BUILD_SHARED_LIBS BUILDSTDERR: CMAKE_CXX_FLAGS_RELEASE BUILDSTDERR: CMAKE_C_FLAGS_RELEASE BUILDSTDERR: CMAKE_Fortran_FLAGS_RELEASE BUILDSTDERR: INCLUDE_INSTALL_DIR BUILDSTDERR: LIB_INSTALL_DIR BUILDSTDERR: LIB_SUFFIX BUILDSTDERR: SHARE_INSTALL_PREFIX BUILDSTDERR: SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/MACSio-1.0 + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.rwGC0D + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 + cd MACSio-1.0 + . /etc/profile.d/modules.sh BUILDSTDERR: ++++ /bin/ps -p 106 -ocomm= BUILDSTDERR: +++ /bin/basename sh BUILDSTDERR: ++ shell=sh BUILDSTDERR: ++ '[' -f /usr/share/Modules/init/sh ']' BUILDSTDERR: ++ . /usr/share/Modules/init/sh BUILDSTDERR: +++ MODULESHOME=/usr/share/Modules BUILDSTDERR: +++ export MODULESHOME BUILDSTDERR: +++ '[' '' = '' ']' BUILDSTDERR: +++ LOADEDMODULES= BUILDSTDERR: +++ export LOADEDMODULES BUILDSTDERR: +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 BUILDSTDERR: ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib BUILDSTDERR: ++ export LD_LIBRARY_PATH BUILDSTDERR: ++ LOADEDMODULES=mpi/openmpi-x86_64 BUILDSTDERR: ++ export LOADEDMODULES BUILDSTDERR: ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man BUILDSTDERR: ++ export MANPATH BUILDSTDERR: ++ MPI_BIN=/usr/lib64/openmpi/bin BUILDSTDERR: ++ export MPI_BIN BUILDSTDERR: ++ MPI_COMPILER=openmpi-x86_64 BUILDSTDERR: ++ export MPI_COMPILER BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR BUILDSTDERR: ++ MPI_HOME=/usr/lib64/openmpi BUILDSTDERR: ++ export MPI_HOME BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 BUILDSTDERR: ++ export MPI_INCLUDE BUILDSTDERR: ++ MPI_LIB=/usr/lib64/openmpi/lib BUILDSTDERR: ++ export MPI_LIB BUILDSTDERR: ++ MPI_MAN=/usr/share/man/openmpi-x86_64 BUILDSTDERR: ++ export MPI_MAN BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH BUILDSTDERR: ++ MPI_SUFFIX=_openmpi BUILDSTDERR: ++ export MPI_SUFFIX BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 BUILDSTDERR: ++ export MPI_SYSCONFIG BUILDSTDERR: ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin BUILDSTDERR: ++ export PATH BUILDSTDERR: ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi BUILDSTDERR: ++ export PYTHONPATH BUILDSTDERR: ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 BUILDSTDERR: ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 /usr/bin/cmake -H/builddir/build/BUILD/MACSio-1.0 -B/builddir/build/BUILD/MACSio-1.0 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/MACSio-1.0/CMakeFiles /builddir/build/BUILD/MACSio-1.0/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/MACSio-1.0' /usr/bin/make -f macsio/CMakeFiles/macsio.dir/build.make macsio/CMakeFiles/macsio.dir/depend make[2]: Entering directory `/builddir/build/BUILD/MACSio-1.0' cd /builddir/build/BUILD/MACSio-1.0 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/MACSio-1.0 /builddir/build/BUILD/MACSio-1.0/macsio /builddir/build/BUILD/MACSio-1.0 /builddir/build/BUILD/MACSio-1.0/macsio /builddir/build/BUILD/MACSio-1.0/macsio/CMakeFiles/macsio.dir/DependInfo.cmake --color= Scanning dependencies of target macsio make[2]: Leaving directory `/builddir/build/BUILD/MACSio-1.0' /usr/bin/make -f macsio/CMakeFiles/macsio.dir/build.make macsio/CMakeFiles/macsio.dir/build make[2]: Entering directory `/builddir/build/BUILD/MACSio-1.0' /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 1 [ 9%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_clargs.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_clargs.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_clargs.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_clargs.c: In function 'int MACSIO_CLARGS_ProcessCmdline(void**, MACSIO_CLARGS_ArgvFlags_t, int, int, char**, ...)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_clargs.c:612:9: warning: unused variable 'outFILE' [-Wunused-variable] BUILDSTDERR: FILE *outFILE = (isatty(2) ? stderr : stdout); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_clargs.c:187:8: warning: unused variable 'isgroup' [-Wunused-variable] BUILDSTDERR: int isgroup = 0; BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 2 [ 18%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_mif.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_mif.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_mif.c /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 3 [ 27%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_iface.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_iface.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_iface.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_iface.c: In function 'void MACSIO_IFACE_GetIdsMatchingFileExtension(int*, int**, const char*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_iface.c:85:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: *cnt = n; BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 4 [ 36%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_timing.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_timing.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c: In function 'void MACSIO_TIMING_ReduceTimers(MPI_Comm, int)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:543:9: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0], offsets); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:543:48: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0], offsets); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:546:9: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].total_time, offsets+1); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:546:61: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].total_time, offsets+1); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:549:9: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].gmask, offsets+2); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:549:56: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].gmask, offsets+2); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:552:9: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].__file__[0], offsets+3); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:552:62: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].__file__[0], offsets+3); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:555:9: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].label[0], offsets+4); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:555:59: warning: 'int MPI_Address(void*, MPI_Aint*)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1188): MPI_Address is superseded by MPI_Get_address in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Address(&timerHashTable[0].label[0], offsets+4); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:557:9: warning: 'int MPI_Type_struct(int, int*, MPI_Aint*, ompi_datatype_t**, ompi_datatype_t**)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1797): MPI_Type_struct is superseded by MPI_Type_create_struct in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Type_struct(5, lengths, offsets, types, &timerinfo_mpi_type); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:557:72: warning: 'int MPI_Type_struct(int, int*, MPI_Aint*, ompi_datatype_t**, ompi_datatype_t**)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1797): MPI_Type_struct is superseded by MPI_Type_create_struct in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Type_struct(5, lengths, offsets, types, &timerinfo_mpi_type); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c: In function 'void dump_timers_to_strings(const timerInfo_t*, MACSIO_TIMING_GroupMask_t, char***, int*, int*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_timing.c:603:27: warning: '_strs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: _strs[_nstrs-1] = (char *) malloc(max_str_size); BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 5 [ 45%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_utils.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_utils.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_utils.c /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 6 [ 54%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_log.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_log.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c: In function 'void MACSIO_LOG_LogMsg(const MACSIO_LOG_LogHandle_t*, const char*, ...)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c:207:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] BUILDSTDERR: while (i < strlen(msg) && i < log->log_line_length) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c: In function 'MACSIO_LOG_LogHandle_t* MACSIO_LOG_LogInit(MPI_Comm, const char*, int, int, int)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c:154:100: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] BUILDSTDERR: write(filefd, linbuf, sizeof(char) * line_len * (lines_per_proc+extra_lines_proc0)); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c:156:80: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] BUILDSTDERR: write(filefd, linbuf, sizeof(char) * line_len * lines_per_proc); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c: In function 'void MACSIO_LOG_LogMsg(const MACSIO_LOG_LogHandle_t*, const char*, ...)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c:230:61: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] BUILDSTDERR: write(log->logfile, buf, sizeof(char) * strlen(buf)); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_log.c:237:84: warning: ignoring return value of 'ssize_t pwrite(int, const void*, size_t, __off_t)', declared with attribute warn_unused_result [-Wunused-result] BUILDSTDERR: pwrite(log->logfile, buf, sizeof(char) * log->log_line_length, seek_offset); BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 7 [ 63%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_data.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_data.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: In function 'json_object* MACSIO_DATA_MakeRandomObject(int)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:291:18: warning: unused variable 'first_attempt' [-Wunused-variable] BUILDSTDERR: json_object *first_attempt = make_random_object_recurse(nbytes, 0); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:293:1: warning: no return statement in function returning non-void [-Wreturn-type] BUILDSTDERR: } BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: In function 'json_object* MACSIO_DATA_MakeRandomTable(int)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:299:9: warning: unused variable 'nbytes_per_entry' [-Wunused-variable] BUILDSTDERR: int nbytes_per_entry = random() % (nbytes / divisor) + 4; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:300:1: warning: no return statement in function returning non-void [-Wreturn-type] BUILDSTDERR: } BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: In function 'json_object* make_structured_mesh_topology(int, const int*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:428:9: warning: unused variable 'nz' [-Wunused-variable] BUILDSTDERR: int nz = MACSIO_UTILS_ZDim(dims); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: In function 'int choose_part_count(int, int, int*, int*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:1034:17: warning: value computed is not used [-Wunused-value] BUILDSTDERR: *R--; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:1039:17: warning: value computed is not used [-Wunused-value] BUILDSTDERR: *Q--; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:1046:17: warning: value computed is not used [-Wunused-value] BUILDSTDERR: *Q--; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:1051:17: warning: value computed is not used [-Wunused-value] BUILDSTDERR: *R--; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: In function 'json_object* MACSIO_DATA_GenerateTimeZeroDumpObject(json_object*, int*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:1082:9: warning: unused variable 'K1' [-Wunused-variable] BUILDSTDERR: int K1 = K+1; /* some ranks get K+1 parts */ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: In function 'json_object* make_scalar_var(int, const int*, const double*, const char*, const char*, const char*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:797:54: warning: 'data_obj' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: valip = (int *) json_object_extarr_data(data_obj); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c: At global scope: BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:871:1: warning: 'json_object* make_vector_var(int, const int*, const double*)' defined but not used [-Wunused-function] BUILDSTDERR: make_vector_var(int ndims, int const *dims, double const *bounds) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:877:1: warning: 'json_object* make_tensor_var(int, const int*, const double*)' defined but not used [-Wunused-function] BUILDSTDERR: make_tensor_var(int ndims, int const *dims, double const *bounds) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_data.c:883:1: warning: 'json_object* make_subset_var(int, const int*, const double*)' defined but not used [-Wunused-function] BUILDSTDERR: make_subset_var(int ndims, int const *dims, double const *bounds) BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 8 [ 72%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_work.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_work.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c: In function 'void MACSIO_WORK_LevelThree(double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c:262:12: warning: unused variable 'epsilon' [-Wunused-variable] BUILDSTDERR: double epsilon = 1.0E-03; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c: In function 'void MACSIO_WORK_LevelTwo(double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c:222:135: warning: array subscript is above array bounds [-Warray-bounds] BUILDSTDERR: xx[i1] += ( sin(cell[loc[i1]].ncv1[0][0])+ sin(cell[loc[i1]].ncv1[1][0])+ sin(cell[loc[i1]].ncv1[2][0])+ sin(cell[loc[i1]].ncv1[4][0]) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c:224:135: warning: array subscript is above array bounds [-Warray-bounds] BUILDSTDERR: yy[i1] += ( sin(cell[loc[i1]].ncv1[0][1])+ sin(cell[loc[i1]].ncv1[1][1])+ sin(cell[loc[i1]].ncv1[2][1])+ sin(cell[loc[i1]].ncv1[4][1]) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_work.c:226:135: warning: array subscript is above array bounds [-Warray-bounds] BUILDSTDERR: zz[i1] += ( sin(cell[loc[i1]].ncv1[0][2])+ sin(cell[loc[i1]].ncv1[1][2])+ sin(cell[loc[i1]].ncv1[2][2])+ sin(cell[loc[i1]].ncv1[4][2]) BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 9 [ 81%] Building CXX object macsio/CMakeFiles/macsio.dir/macsio_main.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/macsio_main.c.o -c /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c: In function 'int write_timings_file(const char*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:602:1: warning: no return statement in function returning non-void [-Wreturn-type] BUILDSTDERR: } BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c: In function 'int main_write(int, int, char**, json_object*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:697:21: warning: unused variable 'scr_valid' [-Wunused-variable] BUILDSTDERR: int scr_valid = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:609:62: warning: unused variable 'seconds_str2' [-Wunused-variable] BUILDSTDERR: char nbytes_str[32], seconds_str[32], bandwidth_str[32], seconds_str2[32]; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:790:1: warning: no return statement in function returning non-void [-Wreturn-type] BUILDSTDERR: } BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c: In function 'int main_read(int, int, char**, json_object*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:836:1: warning: no return statement in function returning non-void [-Wreturn-type] BUILDSTDERR: } BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c: In function 'int main(int, char**)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:863:5: warning: 'int MPI_Errhandler_set(MPI_Comm, MPI_Errhandler)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1340): MPI_Errhandler_set is superseded by MPI_Comm_set_errhandler in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Errhandler_set(MACSIO_MAIN_Comm, MPI_ERRORS_RETURN); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:863:59: warning: 'int MPI_Errhandler_set(MPI_Comm, MPI_Errhandler)' is deprecated (declared at /usr/include/openmpi-x86_64/mpi.h:1340): MPI_Errhandler_set is superseded by MPI_Comm_set_errhandler in MPI-2.0 [-Wdeprecated-declarations] BUILDSTDERR: MPI_Errhandler_set(MACSIO_MAIN_Comm, MPI_ERRORS_RETURN); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:843:18: warning: unused variable 'problem_obj' [-Wunused-variable] BUILDSTDERR: json_object *problem_obj = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:848:9: warning: unused variable 'size' [-Wunused-variable] BUILDSTDERR: int size = 1, rank = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/macsio/macsio_main.c:848:19: warning: unused variable 'rank' [-Wunused-variable] BUILDSTDERR: int size = 1, rank = 0; BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 10 [ 90%] Building CXX object macsio/CMakeFiles/macsio.dir/__/plugins/macsio_miftmpl.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/__/plugins/macsio_miftmpl.c.o -c /builddir/build/BUILD/MACSio-1.0/plugins/macsio_miftmpl.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_miftmpl.c: In function 'void main_dump(int, int, char**, json_object*, int, double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_miftmpl.c:339:98: warning: narrowing conversion of '(json_object_apath_get_int(main_obj, json_paste_apath(((const char*)"\"clargs/exercise_scr\""), ((const char*)"clargs/exercise_scr"))) & 1)' from 'int' to 'unsigned int' inside { } is ill-formed in C++11 [-Wnarrowing] BUILDSTDERR: MACSIO_MIF_ioFlags_t ioFlags = {MACSIO_MIF_WRITE, JsonGetInt(main_obj, "clargs/exercise_scr")&0x1}; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_miftmpl.c:336:9: warning: unused variable 'i' [-Wunused-variable] BUILDSTDERR: int i, rank, numFiles; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_miftmpl.c:379:50: warning: 'numFiles' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: CreateMyFile, OpenMyFile, CloseMyFile, 0); BUILDSTDERR: ^ /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 11 [100%] Building CXX object macsio/CMakeFiles/macsio.dir/__/plugins/macsio_hdf5.c.o cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/c++ -DHAVE_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/include/openmpi-x86_64 -I/builddir/build/BUILD/MACSio-1.0/plugins -I/builddir/build/BUILD/MACSio-1.0/macsio -o CMakeFiles/macsio.dir/__/plugins/macsio_hdf5.c.o -c /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c: In function 'void main_dump_sif(json_object*, int, double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1073:13: warning: unused variable 'parts_log_dims_val' [-Wunused-variable] BUILDSTDERR: int parts_log_dims_val = JsonGetInt(global_parts_log_dims_array, "", i); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1127:26: warning: unused variable 'var_obj' [-Wunused-variable] BUILDSTDERR: json_object *var_obj = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1030:17: warning: unused variable 'mesh_type' [-Wunused-variable] BUILDSTDERR: char const *mesh_type = json_object_path_get_string(main_obj, "clargs/part_type"); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1037:11: warning: unused variable 'dcpl_id' [-Wunused-variable] BUILDSTDERR: hid_t dcpl_id = H5Pcreate(H5P_DATASET_CREATE); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c: In function 'void main_dump_mif(json_object*, int, int, double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1284:52: warning: narrowing conversion of '(json_object_apath_get_int(main_obj, json_paste_apath(((const char*)"\"clargs/exercise_scr\""), ((const char*)"clargs/exercise_scr"))) & 1)' from 'int' to 'unsigned int' inside { } is ill-formed in C++11 [-Wnarrowing] BUILDSTDERR: JsonGetInt(main_obj, "clargs/exercise_scr")&0x1}; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1275:9: warning: variable 'size' set but not used [-Wunused-but-set-variable] BUILDSTDERR: int size, rank; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1278:11: warning: variable 'h5Group' set but not used [-Wunused-but-set-variable] BUILDSTDERR: hid_t h5Group; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1280:9: warning: unused variable 'i' [-Wunused-variable] BUILDSTDERR: int i, len; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1280:12: warning: unused variable 'len' [-Wunused-variable] BUILDSTDERR: int i, len; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1281:10: warning: unused variable 'theData' [-Wunused-variable] BUILDSTDERR: int *theData; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c: In function 'void main_dump(int, int, char**, json_object*, int, double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1345:9: warning: variable 'rank' set but not used [-Wunused-but-set-variable] BUILDSTDERR: int rank, size, numFiles; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1345:15: warning: variable 'size' set but not used [-Wunused-but-set-variable] BUILDSTDERR: int rank, size, numFiles; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c: In function 'void* OpenHDF5File(const char*, const char*, MACSIO_MIF_ioFlags_t, void*)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1227:21: warning: 'retval' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: return (void *) retval; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c: In function 'void main_dump(int, int, char**, json_object*, int, double)': BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:1399:56: warning: 'numFiles' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: main_dump_mif(main_obj, numFiles, dumpn, dumpt); BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c: At global scope: BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:679:12: warning: 'silo_block_size' defined but not used [-Wunused-variable] BUILDSTDERR: static int silo_block_size = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:680:12: warning: 'silo_block_count' defined but not used [-Wunused-variable] BUILDSTDERR: static int silo_block_count = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:684:12: warning: 'lbuf_size' defined but not used [-Wunused-variable] BUILDSTDERR: static int lbuf_size = 0; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:685:20: warning: 'filename' defined but not used [-Wunused-variable] BUILDSTDERR: static const char *filename; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:686:14: warning: 'fid' defined but not used [-Wunused-variable] BUILDSTDERR: static hid_t fid; BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/MACSio-1.0/plugins/macsio_hdf5.c:687:14: warning: 'dspc' defined but not used [-Wunused-variable] BUILDSTDERR: static hid_t dspc = -1; BUILDSTDERR: ^ Linking CXX executable macsio cd /builddir/build/BUILD/MACSio-1.0/macsio && /usr/bin/cmake -E cmake_link_script CMakeFiles/macsio.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -Wl,-z,relro CMakeFiles/macsio.dir/macsio_clargs.c.o CMakeFiles/macsio.dir/macsio_mif.c.o CMakeFiles/macsio.dir/macsio_iface.c.o CMakeFiles/macsio.dir/macsio_timing.c.o CMakeFiles/macsio.dir/macsio_utils.c.o CMakeFiles/macsio.dir/macsio_log.c.o CMakeFiles/macsio.dir/macsio_data.c.o CMakeFiles/macsio.dir/macsio_work.c.o CMakeFiles/macsio.dir/macsio_main.c.o CMakeFiles/macsio.dir/__/plugins/macsio_miftmpl.c.o CMakeFiles/macsio.dir/__/plugins/macsio_hdf5.c.o -o macsio -rdynamic -ljson-cwx /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libhdf5.so -Wl,-rpath,/usr/lib64/openmpi/lib: make[2]: Leaving directory `/builddir/build/BUILD/MACSio-1.0' /usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/MACSio-1.0/CMakeFiles 1 2 3 4 5 6 7 8 9 10 11 [100%] Built target macsio make[1]: Leaving directory `/builddir/build/BUILD/MACSio-1.0' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/MACSio-1.0/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory `/builddir/build/BUILD/MACSio-1.0' make[1]: Nothing to be done for `preinstall'. make[1]: Leaving directory `/builddir/build/BUILD/MACSio-1.0' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "" -- Installing: /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/macsio -- Removed runtime path from "/builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/macsio" + mkdir -p /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/lib64/openmpi/bin + mv /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/macsio /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/lib64/openmpi/bin + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 /builddir/build/BUILD/MACSio-1.0 extracting debug info from /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/lib64/openmpi/bin/macsio BUILDSTDERR: dwz: Too few files for multifile optimization /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. BUILDSTDERR: 618 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Processing files: macsio-1.0-1.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.BQDCnX + umask 022 + cd /builddir/build/BUILD + cd MACSio-1.0 + DOCDIR=/builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/doc/macsio-1.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/doc/macsio-1.0 + cp -pr README.md /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/doc/macsio-1.0 + cp -pr INSTALLING /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/doc/macsio-1.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.jLANLg + umask 022 + cd /builddir/build/BUILD + cd MACSio-1.0 + LICENSEDIR=/builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/licenses/macsio-1.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/licenses/macsio-1.0 + cp -pr LICENSE /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64/usr/share/licenses/macsio-1.0 + exit 0 Provides: macsio = 1.0-1.el7 macsio(x86-64) = 1.0-1.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libhdf5.so.8()(64bit) libjson-cwx.so.2()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libmpi.so.12()(64bit) libmpi_cxx.so.1()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) rtld(GNU_HASH) Processing files: macsio-debuginfo-1.0-1.el7.x86_64 Provides: macsio-debuginfo = 1.0-1.el7 macsio-debuginfo(x86-64) = 1.0-1.el7 Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 Wrote: /builddir/build/RPMS/macsio-1.0-1.el7.x86_64.rpm Wrote: /builddir/build/RPMS/macsio-debuginfo-1.0-1.el7.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.7JtOQd + umask 022 + cd /builddir/build/BUILD + cd MACSio-1.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/macsio-1.0-1.el7.x86_64 + exit 0 Child return code was: 0