Mock Version: 2.3 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/sionlib.spec'], chrootPath='/var/lib/mock/epel-7-x86_64-1593125995.249006/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.0mjvzirt:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.0mjvzirt:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '3c8caff31edb4a39a888d4ce8a764f88', '-D', '/var/lib/mock/epel-7-x86_64-1593125995.249006/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.0mjvzirt:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/sionlib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/sionlib-1.7.6-3.el7.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/sionlib.spec'], chrootPath='/var/lib/mock/epel-7-x86_64-1593125995.249006/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.0mjvzirt:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.0mjvzirt:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '819fe75a760047629ac2bd0ea692edb4', '-D', '/var/lib/mock/epel-7-x86_64-1593125995.249006/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.0mjvzirt:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/sionlib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.UBBsnQ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf sionlib + /usr/bin/gzip -dc /builddir/build/SOURCES/sionlib-1.7.6.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd sionlib + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #1 (sionlib-shared.patch):' Patch #1 (sionlib-shared.patch): + /usr/bin/patch -p1 -b --suffix .shared --fuzz=0 + /usr/bin/cat /builddir/build/SOURCES/sionlib-shared.patch patching file mf/Makefile.defs.linux-gomp patching file src/cppinterface/Makefile patching file src/fortraninterface/Makefile patching file src/lib/Makefile Hunk #1 succeeded at 63 (offset 2 lines). Hunk #2 succeeded at 84 (offset 2 lines). patching file src/parlib/Makefile Hunk #1 succeeded at 28 (offset 2 lines). Hunk #2 succeeded at 45 (offset 2 lines). Hunk #3 succeeded at 57 (offset 2 lines). Hunk #4 succeeded at 66 (offset 2 lines). Hunk #5 succeeded at 102 (offset 2 lines). patching file src/parutils/Makefile Hunk #1 succeeded at 70 (offset 1 line). Hunk #2 succeeded at 109 (offset 1 line). patching file src/utils/Makefile Hunk #1 succeeded at 40 (offset 3 lines). patching file test/parallel/Makefile Hunk #2 succeeded at 350 (offset 4 lines). patching file test/serial/Makefile Hunk #1 succeeded at 121 (offset 3 lines). + ln -sf /usr/bin/install config/install-sh + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.MMDPY2 + umask 022 + cd /builddir/build/BUILD + cd sionlib + . /etc/profile.d/modules.sh ++++ /bin/ps -p 41 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi3-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi3-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi3/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi3-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi3-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi3/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi3-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi3' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi3' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi3-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi3/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi3-x86_64' ';export' 'MPI_MAN;MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON2_SITEARCH;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi3' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi3-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/openmpi3/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi3' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi3-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi3/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi3-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi3-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi3/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi3-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi3 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi3 ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi3-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi3/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi3-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3 ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3 ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi3 ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi3-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi3/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi3 ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi3-x86_64 ++ export _LMFILES_ + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3 ompi3 ~/build/BUILD/sionlib/ompi3 ~/build/BUILD/sionlib + pushd ompi3 + cp -a ../config ../src ../mf ../examples ../test . + ../configure --prefix=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3 --compiler=gnu --mpi=openmpi WARNING: Installation directory /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3 exists. Existing content will be overwritten when installing. Configuration for Linux cluster with GNU compilers and openmpi MPI - Setting up build configuration (build-linux-gomp-openmpi) - Generating GNUmakefile (using Makefile.basic) - Generating Makefile.defs (using Makefile.defs.linux-gomp + optional.defs + lock.defs) dirname: missing operand Try 'dirname --help' for more information. dirname: missing operand Try 'dirname --help' for more information. Configuring Makefile.defs - Setting PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3 - Configuring for gnu v4.8.5 compilers - Using gfortran instead of g77 - Configuring openmpi MPI library - Using default 64-bit compilation mode NOTE: Configured for PTHREADS support (using mutex_lock/unlock) #################################################################### CONFIGURATION COMPLETE Next steps: - cd build-linux-gomp-openmpi - [optional] Edit Makefile.defs for further configuration - make - make install #################################################################### + /usr/bin/make -j2 -C build-linux-gomp-openmpi 'OPTFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC' PFLAG= 'F77=gfortran ' 'F90=gfortran ' 'MPIF77=mpif77 ' 'OMPIF77=mpif90 ' make: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi' make[1]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi' ++++++++++ SETUP ++++++++++++++++++++++++++++++ mkdir build gcc ../config/lndir.c -o build/lndir cd build; ./lndir ../../src ../../src/cppinterface: ../../src/parlib: ../../src/utils: ../../src/fortraninterface: ../../src/parutils: ../../src/lib: mkdir build/mf cd build/mf; ../lndir ../../../mf cd build; rm -f RealMakefile; ln -s ../../mf/RealMakefile . cd build; rm -f GNUmakefile; ln -s RealMakefile GNUmakefile cd build; rm -f Makefile; \ ln -s ../../mf/Makefile.redirect Makefile cd build; rm -f Makefile.defs; ln -s ../Makefile.defs Makefile.defs mkdir build/examples cd build/examples; ../lndir ../../../examples ../../../examples/par_mandel_fortran: ../../../examples/simple: ../../../examples/mp2c: ../../../examples/pepc: ../../../examples/par_mandel: mkdir build/test cd build/test; ../lndir ../../../test ../../../test/parallel: ../../../test/serial: cd build/test; rm -f RealMakefile; ln -s ../../../mf/RealMakefile . make[1]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/lib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_serial.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_common.o sion_common.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_fd.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_filedesc.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_file.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_metadata.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_tools.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_debug.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_error_handler.o sion_error_handler.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_printts.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_seek.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_collstat.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_startptr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_convert.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buffer.o sion_buffer.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_linux.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_gpfs.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_cache.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_dup.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_inline.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_table.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_keymngr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buddy_common.o sion_buddy_common.c sion_buddy_common.c: In function 'sion_get_io_info_buddy': sion_buddy_common.c:170:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p->sizes[c]=0; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_flags.o sion_flags.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -DSION_USE_PTHREADS -c sion_lock.c -o sion_lock_pthreads.o gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_lock.c -o sion_lock_none.o ar -rcs libsionser_64.a sion_serial.o *** libsionser_64.a built ar -rcs libsioncom_64_lock_pthreads.a sion_lock_pthreads.o *** libsioncom_64_lock_pthreads.a built ar -rcs libsioncom_64_lock_none.a sion_lock_none.o *** libsioncom_64_lock_none.a built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_64.so.1 -o libsionser_64.so.1 sion_serial.o *** libsionser_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_pthreads.so.1 -o libsioncom_64_lock_pthreads.so.1 sion_lock_pthreads.o gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_none.so.1 -o libsioncom_64_lock_none.so.1 sion_lock_none.o *** libsioncom_64_lock_pthreads.so.1 built ar -rcs libsioncom_64.a sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64_lock_none.so.1 built ln -s libsionser_64.so.1 libsionser_64.so *** libsioncom_64.a built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64.so.1 -o libsioncom_64.so.1 sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o ln -s libsioncom_64_lock_pthreads.so.1 libsioncom_64_lock_pthreads.so ln -s libsioncom_64_lock_none.so.1 libsioncom_64_lock_none.so *** libsioncom_64.so.1 built ln -s libsioncom_64.so.1 libsioncom_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parlib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_internal.c sion_generic.c: In function '_sion_generic_get_and_distribute_info_from_file': sion_generic.c:858:27: warning: 'tasksinfile' may be used uninitialized in this function [-Wmaybe-uninitialized] if(tasksinfile) free(tasksinfile); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_mapped.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective_merge.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_buddy.c sion_generic_buddy.c: In function '_sion_coll_fread_buddy': sion_generic_buddy.c:951:94: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(b_sion_filedesc->fileptr,ownnewposition);b_sion_filedesc->currentpos=ownnewposition; ^ sion_generic_buddy.c: In function '_sion_coll_fwrite_buddy': sion_generic_buddy.c:791:102: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(sion_filedesc_coll->fileptr,ownnewposition);sion_filedesc_coll->currentpos=ownnewposition; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_apidesc.c sion_generic_buddy.c: In function '_sion_paropen_generic_buddy': sion_generic_buddy.c:427:24: warning: 'step' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[0]=step-1; /* step number */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_noreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:432:74: warning: 'stepcount_reader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:432:53: warning: 'stepcount_collreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_coll' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:327:43: warning: 'file_lgroup' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sion_gendata->grank == 0) helpint32=file_lgroup; ^ OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_lock.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_gen.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_cb_gen.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_internal_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_deprecated.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_cb_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_coll_cb_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_internal_gen.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c -o sion_mpi_util.o sion_mpi_util.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_file_check.c sion_mpi_internal_gen.c: In function '_sion_get_filenumber_from_files_mpi': sion_mpi_internal_gen.c:276:32: warning: 'sid' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sid>=0) _sion_close_sid(sid); ^ OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_gen.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_cb_gen.c sion_ompi_gen.c: In function 'sion_paropen_ompi': sion_ompi_gen.c:302:5: warning: 'rc' may be used uninitialized in this function [-Wmaybe-uninitialized] return(_sion_errorprint_ompi(SION_ID_NOT_VALID,_SION_ERROR_RETURN,"sion_paropen_mpi: invalid return code from internal open %d", rc)); ^ sion_ompi_gen.c:251:66: warning: 'num_threads' may be used uninitialized in this function [-Wmaybe-uninitialized] thread_sync->lrank_master_ompi = _sion_map_rank_mpi_to_ompi(lRank,num_threads,thread_num); ^ OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_coll_cb_gen.c sion_ompi_cb_gen.c: In function '_sion_ompi_gatherr_cb': sion_ompi_cb_gen.c:319:7: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] help=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_scatterr_cb': sion_ompi_cb_gen.c:397:7: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] help=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_gathervr_cb': sion_ompi_cb_gen.c:620:35: warning: 'mcount' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_opmi_grc = MPI_Gatherv((sion_int64 *) help, mcount, SION_MPI_INT64, (sion_int64 *) outdata, mcounts, mdispls, SION_MPI_INT64, mroot, commgroup); ^ sion_ompi_cb_gen.c:492:10: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] tcounts=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_coll_cb_gen.c: In function '_sion_ompi_gather_process_cb': sion_ompi_coll_cb_gen.c:97:9: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] specs = (sion_int64 **)__sion_ompicol_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_scattervr_cb': sion_ompi_cb_gen.c:686:10: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] tcounts=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_coll_cb_gen.c: In function '_sion_ompi_process_scatter_cb': sion_ompi_coll_cb_gen.c:316:9: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] specs = (sion_int64 **)__sion_ompicol_share_ptr((void *) helpdata); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c -o sion_ompi_util.o sion_ompi_util.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_internal_gen.c gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsiongen_64.so.1 -o libsiongen_64.so.1 sion_generic.o sion_generic_internal.o sion_generic_mapped.o sion_generic_collective.o sion_generic_collective_merge.o sion_generic_buddy.o sion_generic_apidesc.o sion_lock.o *** libsiongen_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionomp_64.so.1 -o libsionomp_64.so.1 sion_omp_gen.o sion_omp_cb_gen.o sion_omp_internal_gen.o sion_lock.o *** libsionomp_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionmpi_64.so.1 -o libsionmpi_64.so.1 sion_mpi_gen.o sion_mpi_deprecated.o sion_mpi_cb_gen.o sion_mpi_coll_cb_gen.o sion_mpi_internal_gen.o sion_mpi_util.o sion_mpi_file_check.o sion_lock.o ln -s libsiongen_64.so.1 libsiongen_64.so ln -s libsionomp_64.so.1 libsionomp_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionompi_64.so.1 -o libsionompi_64.so.1 sion_ompi_gen.o sion_ompi_cb_gen.o sion_ompi_coll_cb_gen.o sion_ompi_util.o sion_ompi_internal_gen.o sion_lock.o *** libsionmpi_64.so.1 built ln -s libsionmpi_64.so.1 libsionmpi_64.so *** libsionompi_64.so.1 built ln -s libsionompi_64.so.1 libsionompi_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"Unknown"' -c siondump.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"Unknown"' -c siondefrag.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"Unknown"' -c sionsplit.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"Unknown"' -c sioncat.c sioncat.c: In function 'main': sioncat.c:229:21: warning: 'outfp' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_close(outfp); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"Unknown"' -c sionversion.c gcc -o siondump siondump.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o siondefrag siondefrag.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none cp siondump ../.. gcc -o sionsplit sionsplit.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sioncat sioncat.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sionversion sionversion.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/cppinterface' g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_base.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_serial.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_common.cpp OMPI_CXX="g++" mpicxx -DSION_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_mpi.cpp gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_cxx_64.so.1 -o libsionser_cxx_64.so.1 sion_cxx_base.o sion_cxx_serial.o sion_cxx_common.o *** libsionser_cxx_64.so.1 built ln -s libsionser_cxx_64.so.1 libsionser_cxx_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_cxx_64.so.1 -o libsionmpi_cxx_64.so.1 sion_cxx_mpi.o ar -rcs libsionmpi_cxx_64.a sion_cxx_mpi.o *** libsionmpi_cxx_64.a built *** libsionmpi_cxx_64.so.1 built ln -s libsionmpi_cxx_64.so.1 libsionmpi_cxx_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/fortraninterface' gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f77.H > sion_f77.h gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f77.c gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_omp.f gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_omp.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90.F90 > sion_f90.f90 gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f90.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_omp.F90 > sion_f90_omp.f90 mpif77 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_mpi.f OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_mpi.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_mpi_f77.c mpif77 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_ompi.f OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_ompi.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_mpi.F90 > sion_f90_mpi.f90 OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_mpi_f90.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_ompi.F90 > sion_f90_ompi.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77.f gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_f77_64.so.1 -o libsionmpi_f77_64.so.1 sion_f77_mpi.o sion_fortran_mpi.o sion_fortran_writeread_mpi_f77.o sion_f77_ompi.o sion_fortran_ompi.o gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f77_64.so.1 -o libsionser_f77_64.so.1 sion_f77.o sion_fortran.o sion_fortran_writeread_f77.o sion_f77_omp.o sion_fortran_omp.o *** libsionmpi_f77_64.so.1 built gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_omp.f90 *** libsionser_f77_64.so.1 built OMPI_FC="gfortran " mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_mpi.f90 OMPI_FC="gfortran " mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_ompi.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f90_64.so.1 -o libsionser_f90_64.so.1 sion_f90.o sion_fortran.o sion_fortran_writeread_f90.o sion_f90_omp.o sion_fortran_omp.o ln -s libsionser_f77_64.so.1 libsionser_f77_64.so gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_f90_64.so.1 -o libsionmpi_f90_64.so.1 sion_f90_mpi.o sion_fortran_mpi.o sion_fortran_writeread_mpi_f90.o sion_f90_ompi.o sion_fortran_ompi.o *** libsionser_f90_64.so.1 built ln -s libsionser_f90_64.so.1 libsionser_f90_64.so *** libsionmpi_f90_64.so.1 built make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parutils' OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest_split_comm.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest_sionfile.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest_mpiio.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest_tasklocalfile.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest_util.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c partest_opts.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c ompi_partest.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c ompi_partest_sionfile.c OMPI_CC="gcc" mpicc -DSION_OMP -fopenmp -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"Unknown"' -c omp_partest_sionfile.c ompi_partest_sionfile.c: In function 'test_paropen_multi_ompi': ompi_partest_sionfile.c:150:20: warning: 'fd' may be used uninitialized in this function [-Wmaybe-uninitialized] bwrote = write(fd, localbuffer, 1*bwrite); ^ omp_partest_sionfile.c: In function 'test_paropen_omp': omp_partest_sionfile.c:120:19: warning: 'fd' may be used uninitialized in this function [-Wmaybe-uninitialized] bwrote = write(fd, localbuffer, 1*bwrite); ^ OMPI_FC="gfortran " mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c fpartest.F90 ln -s ../fortraninterface/libsionmpi_f77_64.so.1 ../fortraninterface/libsionmpi_f77_64.so OMPI_CC="gcc" mpicc -o partest partest.o partest_split_comm.o partest_sionfile.o partest_mpiio.o partest_tasklocalfile.o partest_util.o partest_opts.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionmpi_64 -L../lib -lsiongen_64 -L../lib -lsioncom_64 -lsioncom_64_lock_pthreads -L../lib -lsionser_64 -lsionomp_64 OMPI_CC="gcc" mpicc -o ompi_partest ompi_partest.o ompi_partest_sionfile.o omp_partest_sionfile.o partest_opts.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionompi_64 -L../lib -lsiongen_64 -L../lib -lsioncom_64 -lsioncom_64_lock_pthreads -fopenmp -L../parlib -lsionser_64 -lsionompi_64 -lsionomp_64 OMPI_FC="gfortran " mpif90 -o fpartest fpartest.o -L../fortraninterface -lsionser_f77_64 -lsionmpi_f77_64 -lsionompi_64 -lsionomp_64 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionmpi_64 -L../lib -lsiongen_64 -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_pthreads make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build' make: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi' + popd ~/build/BUILD/sionlib + . /etc/profile.d/modules.sh ++++ /bin/ps -p 41 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi3-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi3-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi3-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON2_SITEARCH;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 41 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi + ./configure --prefix=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi --compiler=gnu --mpi=openmpi WARNING: Installation directory /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi exists. Existing content will be overwritten when installing. Configuration for Linux cluster with GNU compilers and openmpi MPI - Setting up build configuration (build-linux-gomp-openmpi) - Generating GNUmakefile (using Makefile.basic) - Generating Makefile.defs (using Makefile.defs.linux-gomp + optional.defs + lock.defs) dirname: missing operand Try 'dirname --help' for more information. dirname: missing operand Try 'dirname --help' for more information. Configuring Makefile.defs - Setting PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi - Configuring for gnu v4.8.5 compilers - Using gfortran instead of g77 - Configuring openmpi MPI library - Using default 64-bit compilation mode NOTE: Configured for PTHREADS support (using mutex_lock/unlock) #################################################################### CONFIGURATION COMPLETE Next steps: - cd build-linux-gomp-openmpi - [optional] Edit Makefile.defs for further configuration - make - make install #################################################################### + /usr/bin/make -j2 -C build-linux-gomp-openmpi 'OPTFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC' PFLAG= 'F77=gfortran ' 'F90=gfortran ' 'MPIF77=mpif77 ' 'OMPIF77=mpif90 ' make: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi' make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi' ++++++++++ SETUP ++++++++++++++++++++++++++++++ mkdir build gcc ../config/lndir.c -o build/lndir cd build; ./lndir ../../src ../../src/lib: ../../src/parutils: ../../src/fortraninterface: ../../src/utils: ../../src/parlib: ../../src/cppinterface: mkdir build/mf cd build/mf; ../lndir ../../../mf cd build; rm -f RealMakefile; ln -s ../../mf/RealMakefile . cd build; rm -f GNUmakefile; ln -s RealMakefile GNUmakefile cd build; rm -f Makefile; \ ln -s ../../mf/Makefile.redirect Makefile cd build; rm -f Makefile.defs; ln -s ../Makefile.defs Makefile.defs mkdir build/examples cd build/examples; ../lndir ../../../examples ../../../examples/par_mandel: ../../../examples/pepc: ../../../examples/mp2c: ../../../examples/simple: ../../../examples/par_mandel_fortran: mkdir build/test cd build/test; ../lndir ../../../test ../../../test/serial: ../../../test/parallel: cd build/test; rm -f RealMakefile; ln -s ../../../mf/RealMakefile . make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/lib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_serial.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_common.o sion_common.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_fd.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_filedesc.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_file.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_metadata.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_tools.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_debug.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_error_handler.o sion_error_handler.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_printts.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_seek.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_collstat.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_startptr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_convert.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buffer.o sion_buffer.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_linux.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_gpfs.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_cache.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_dup.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_inline.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_table.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_keymngr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buddy_common.o sion_buddy_common.c sion_buddy_common.c: In function 'sion_get_io_info_buddy': sion_buddy_common.c:170:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p->sizes[c]=0; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_flags.o sion_flags.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -DSION_USE_PTHREADS -c sion_lock.c -o sion_lock_pthreads.o gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_lock.c -o sion_lock_none.o ar -rcs libsionser_64.a sion_serial.o *** libsionser_64.a built ar -rcs libsioncom_64_lock_pthreads.a sion_lock_pthreads.o *** libsioncom_64_lock_pthreads.a built ar -rcs libsioncom_64_lock_none.a sion_lock_none.o *** libsioncom_64_lock_none.a built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_64.so.1 -o libsionser_64.so.1 sion_serial.o gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_pthreads.so.1 -o libsioncom_64_lock_pthreads.so.1 sion_lock_pthreads.o *** libsionser_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_none.so.1 -o libsioncom_64_lock_none.so.1 sion_lock_none.o *** libsioncom_64_lock_pthreads.so.1 built ar -rcs libsioncom_64.a sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64.a built ln -s libsionser_64.so.1 libsionser_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64.so.1 -o libsioncom_64.so.1 sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64_lock_none.so.1 built ln -s libsioncom_64_lock_pthreads.so.1 libsioncom_64_lock_pthreads.so ln -s libsioncom_64_lock_none.so.1 libsioncom_64_lock_none.so *** libsioncom_64.so.1 built ln -s libsioncom_64.so.1 libsioncom_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parlib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_internal.c sion_generic.c: In function '_sion_generic_get_and_distribute_info_from_file': sion_generic.c:858:27: warning: 'tasksinfile' may be used uninitialized in this function [-Wmaybe-uninitialized] if(tasksinfile) free(tasksinfile); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_mapped.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective_merge.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_buddy.c sion_generic_buddy.c: In function '_sion_coll_fread_buddy': sion_generic_buddy.c:951:94: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(b_sion_filedesc->fileptr,ownnewposition);b_sion_filedesc->currentpos=ownnewposition; ^ sion_generic_buddy.c: In function '_sion_coll_fwrite_buddy': sion_generic_buddy.c:791:102: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(sion_filedesc_coll->fileptr,ownnewposition);sion_filedesc_coll->currentpos=ownnewposition; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_apidesc.c sion_generic_buddy.c: In function '_sion_paropen_generic_buddy': sion_generic_buddy.c:427:24: warning: 'step' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[0]=step-1; /* step number */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_noreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:432:74: warning: 'stepcount_reader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:432:53: warning: 'stepcount_collreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_coll' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:327:43: warning: 'file_lgroup' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sion_gendata->grank == 0) helpint32=file_lgroup; ^ OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_lock.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_gen.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_cb_gen.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_internal_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_deprecated.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_cb_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_coll_cb_gen.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_internal_gen.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c -o sion_mpi_util.o sion_mpi_util.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_file_check.c sion_mpi_internal_gen.c: In function '_sion_get_filenumber_from_files_mpi': sion_mpi_internal_gen.c:276:32: warning: 'sid' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sid>=0) _sion_close_sid(sid); ^ OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_gen.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_cb_gen.c sion_ompi_gen.c: In function 'sion_paropen_ompi': sion_ompi_gen.c:302:5: warning: 'rc' may be used uninitialized in this function [-Wmaybe-uninitialized] return(_sion_errorprint_ompi(SION_ID_NOT_VALID,_SION_ERROR_RETURN,"sion_paropen_mpi: invalid return code from internal open %d", rc)); ^ sion_ompi_gen.c:251:66: warning: 'num_threads' may be used uninitialized in this function [-Wmaybe-uninitialized] thread_sync->lrank_master_ompi = _sion_map_rank_mpi_to_ompi(lRank,num_threads,thread_num); ^ OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_coll_cb_gen.c sion_ompi_cb_gen.c: In function '_sion_ompi_gatherr_cb': sion_ompi_cb_gen.c:319:7: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] help=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_scatterr_cb': sion_ompi_cb_gen.c:397:7: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] help=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_gathervr_cb': sion_ompi_cb_gen.c:620:35: warning: 'mcount' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_opmi_grc = MPI_Gatherv((sion_int64 *) help, mcount, SION_MPI_INT64, (sion_int64 *) outdata, mcounts, mdispls, SION_MPI_INT64, mroot, commgroup); ^ sion_ompi_cb_gen.c:492:10: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] tcounts=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_coll_cb_gen.c: In function '_sion_ompi_gather_process_cb': sion_ompi_coll_cb_gen.c:97:9: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] specs = (sion_int64 **)__sion_ompicol_share_ptr((void *) helpdata); ^ sion_ompi_coll_cb_gen.c: In function '_sion_ompi_process_scatter_cb': sion_ompi_coll_cb_gen.c:316:9: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] specs = (sion_int64 **)__sion_ompicol_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_scattervr_cb': sion_ompi_cb_gen.c:686:10: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] tcounts=__sion_ompi_share_ptr((void *) helpdata); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c -o sion_ompi_util.o sion_ompi_util.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_internal_gen.c gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsiongen_64.so.1 -o libsiongen_64.so.1 sion_generic.o sion_generic_internal.o sion_generic_mapped.o sion_generic_collective.o sion_generic_collective_merge.o sion_generic_buddy.o sion_generic_apidesc.o sion_lock.o *** libsiongen_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionomp_64.so.1 -o libsionomp_64.so.1 sion_omp_gen.o sion_omp_cb_gen.o sion_omp_internal_gen.o sion_lock.o *** libsionomp_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionmpi_64.so.1 -o libsionmpi_64.so.1 sion_mpi_gen.o sion_mpi_deprecated.o sion_mpi_cb_gen.o sion_mpi_coll_cb_gen.o sion_mpi_internal_gen.o sion_mpi_util.o sion_mpi_file_check.o sion_lock.o ln -s libsiongen_64.so.1 libsiongen_64.so ln -s libsionomp_64.so.1 libsionomp_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionompi_64.so.1 -o libsionompi_64.so.1 sion_ompi_gen.o sion_ompi_cb_gen.o sion_ompi_coll_cb_gen.o sion_ompi_util.o sion_ompi_internal_gen.o sion_lock.o *** libsionmpi_64.so.1 built ln -s libsionmpi_64.so.1 libsionmpi_64.so *** libsionompi_64.so.1 built ln -s libsionompi_64.so.1 libsionompi_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c siondump.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c siondefrag.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sionsplit.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sioncat.c sioncat.c: In function 'main': sioncat.c:229:21: warning: 'outfp' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_close(outfp); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sionversion.c gcc -o siondump siondump.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o siondefrag siondefrag.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none cp siondump ../.. gcc -o sionsplit sionsplit.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sioncat sioncat.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sionversion sionversion.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/cppinterface' g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_base.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_serial.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_common.cpp OMPI_CXX="g++" mpicxx -DSION_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_mpi.cpp gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_cxx_64.so.1 -o libsionser_cxx_64.so.1 sion_cxx_base.o sion_cxx_serial.o sion_cxx_common.o *** libsionser_cxx_64.so.1 built ln -s libsionser_cxx_64.so.1 libsionser_cxx_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_cxx_64.so.1 -o libsionmpi_cxx_64.so.1 sion_cxx_mpi.o ar -rcs libsionmpi_cxx_64.a sion_cxx_mpi.o *** libsionmpi_cxx_64.a built *** libsionmpi_cxx_64.so.1 built ln -s libsionmpi_cxx_64.so.1 libsionmpi_cxx_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/fortraninterface' gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f77.H > sion_f77.h gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f77.c gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_omp.f gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_omp.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90.F90 > sion_f90.f90 gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f90.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_omp.F90 > sion_f90_omp.f90 mpif77 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_mpi.f OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_mpi.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_mpi_f77.c mpif77 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_ompi.f OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_ompi.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_mpi.F90 > sion_f90_mpi.f90 OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_mpi_f90.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_ompi.F90 > sion_f90_ompi.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77.f gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_f77_64.so.1 -o libsionmpi_f77_64.so.1 sion_f77_mpi.o sion_fortran_mpi.o sion_fortran_writeread_mpi_f77.o sion_f77_ompi.o sion_fortran_ompi.o gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f77_64.so.1 -o libsionser_f77_64.so.1 sion_f77.o sion_fortran.o sion_fortran_writeread_f77.o sion_f77_omp.o sion_fortran_omp.o *** libsionmpi_f77_64.so.1 built gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_omp.f90 *** libsionser_f77_64.so.1 built OMPI_FC="gfortran " mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_mpi.f90 OMPI_FC="gfortran " mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_ompi.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f90_64.so.1 -o libsionser_f90_64.so.1 sion_f90.o sion_fortran.o sion_fortran_writeread_f90.o sion_f90_omp.o sion_fortran_omp.o ln -s libsionser_f77_64.so.1 libsionser_f77_64.so gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_f90_64.so.1 -o libsionmpi_f90_64.so.1 sion_f90_mpi.o sion_fortran_mpi.o sion_fortran_writeread_mpi_f90.o sion_f90_ompi.o sion_fortran_ompi.o *** libsionser_f90_64.so.1 built ln -s libsionser_f90_64.so.1 libsionser_f90_64.so *** libsionmpi_f90_64.so.1 built make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parutils' OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_split_comm.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_sionfile.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_mpiio.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_tasklocalfile.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_util.c OMPI_CC="gcc" mpicc -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_opts.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c ompi_partest.c OMPI_CC="gcc" mpicc -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c ompi_partest_sionfile.c OMPI_CC="gcc" mpicc -DSION_OMP -fopenmp -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c omp_partest_sionfile.c ompi_partest_sionfile.c: In function 'test_paropen_multi_ompi': ompi_partest_sionfile.c:150:20: warning: 'fd' may be used uninitialized in this function [-Wmaybe-uninitialized] bwrote = write(fd, localbuffer, 1*bwrite); ^ omp_partest_sionfile.c: In function 'test_paropen_omp': omp_partest_sionfile.c:120:19: warning: 'fd' may be used uninitialized in this function [-Wmaybe-uninitialized] bwrote = write(fd, localbuffer, 1*bwrite); ^ OMPI_FC="gfortran " mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c fpartest.F90 ln -s ../fortraninterface/libsionmpi_f77_64.so.1 ../fortraninterface/libsionmpi_f77_64.so OMPI_CC="gcc" mpicc -o partest partest.o partest_split_comm.o partest_sionfile.o partest_mpiio.o partest_tasklocalfile.o partest_util.o partest_opts.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionmpi_64 -L../lib -lsiongen_64 -L../lib -lsioncom_64 -lsioncom_64_lock_pthreads -L../lib -lsionser_64 -lsionomp_64 OMPI_CC="gcc" mpicc -o ompi_partest ompi_partest.o ompi_partest_sionfile.o omp_partest_sionfile.o partest_opts.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionompi_64 -L../lib -lsiongen_64 -L../lib -lsioncom_64 -lsioncom_64_lock_pthreads -fopenmp -L../parlib -lsionser_64 -lsionompi_64 -lsionomp_64 OMPI_FC="gfortran " mpif90 -o fpartest fpartest.o -L../fortraninterface -lsionser_f77_64 -lsionmpi_f77_64 -lsionompi_64 -lsionomp_64 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionmpi_64 -L../lib -lsiongen_64 -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_pthreads make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build' make: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi' + . /etc/profile.d/modules.sh ++++ /bin/ps -p 41 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 41 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich + ./configure --prefix=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich --compiler=gnu --mpi=mpich2 WARNING: Installation directory /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich exists. Existing content will be overwritten when installing. Configuration for Linux cluster with GNU compilers and mpich2 MPI - Setting up build configuration (build-linux-gomp-mpich2) - Generating GNUmakefile (using Makefile.basic) - Generating Makefile.defs (using Makefile.defs.linux-gomp + optional.defs + lock.defs) Configuring Makefile.defs - Setting PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich - Configuring for gnu v4.8.5 compilers - Using gfortran instead of g77 - Configuring mpich2 MPI library - Using default 64-bit compilation mode NOTE: Configured for PTHREADS support (using mutex_lock/unlock) #################################################################### CONFIGURATION COMPLETE Next steps: - cd build-linux-gomp-mpich2 - [optional] Edit Makefile.defs for further configuration - make - make install #################################################################### + /usr/bin/make -j2 -C build-linux-gomp-mpich2 'OPTFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC' PFLAG= 'F77=gfortran ' 'F90=gfortran ' 'MPIF77=mpif77 ' 'MPIF90=mpif90 ' make: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2' make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2' ++++++++++ SETUP ++++++++++++++++++++++++++++++ mkdir build gcc ../config/lndir.c -o build/lndir cd build; ./lndir ../../src ../../src/lib: ../../src/parutils: ../../src/fortraninterface: ../../src/utils: ../../src/parlib: ../../src/cppinterface: mkdir build/mf cd build/mf; ../lndir ../../../mf cd build; rm -f RealMakefile; ln -s ../../mf/RealMakefile . cd build; rm -f GNUmakefile; ln -s RealMakefile GNUmakefile cd build; rm -f Makefile; \ ln -s ../../mf/Makefile.redirect Makefile cd build; rm -f Makefile.defs; ln -s ../Makefile.defs Makefile.defs mkdir build/examples cd build/examples; ../lndir ../../../examples ../../../examples/par_mandel: ../../../examples/pepc: ../../../examples/mp2c: ../../../examples/simple: ../../../examples/par_mandel_fortran: mkdir build/test cd build/test; ../lndir ../../../test ../../../test/serial: ../../../test/parallel: cd build/test; rm -f RealMakefile; ln -s ../../../mf/RealMakefile . make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/lib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_serial.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_common.o sion_common.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_fd.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_filedesc.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_file.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_metadata.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_tools.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_debug.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_error_handler.o sion_error_handler.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_printts.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_seek.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_collstat.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_startptr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_convert.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buffer.o sion_buffer.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_linux.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_gpfs.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_cache.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_dup.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_inline.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_table.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_keymngr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buddy_common.o sion_buddy_common.c sion_buddy_common.c: In function 'sion_get_io_info_buddy': sion_buddy_common.c:170:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p->sizes[c]=0; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_flags.o sion_flags.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -DSION_USE_PTHREADS -c sion_lock.c -o sion_lock_pthreads.o gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_lock.c -o sion_lock_none.o ar -rcs libsionser_64.a sion_serial.o *** libsionser_64.a built ar -rcs libsioncom_64_lock_pthreads.a sion_lock_pthreads.o *** libsioncom_64_lock_pthreads.a built ar -rcs libsioncom_64_lock_none.a sion_lock_none.o *** libsioncom_64_lock_none.a built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_64.so.1 -o libsionser_64.so.1 sion_serial.o *** libsionser_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_pthreads.so.1 -o libsioncom_64_lock_pthreads.so.1 sion_lock_pthreads.o gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_none.so.1 -o libsioncom_64_lock_none.so.1 sion_lock_none.o *** libsioncom_64_lock_pthreads.so.1 built ar -rcs libsioncom_64.a sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64.a built ln -s libsionser_64.so.1 libsionser_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64.so.1 -o libsioncom_64.so.1 sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64_lock_none.so.1 built ln -s libsioncom_64_lock_pthreads.so.1 libsioncom_64_lock_pthreads.so ln -s libsioncom_64_lock_none.so.1 libsioncom_64_lock_none.so *** libsioncom_64.so.1 built ln -s libsioncom_64.so.1 libsioncom_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parlib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_internal.c sion_generic.c: In function '_sion_generic_get_and_distribute_info_from_file': sion_generic.c:858:27: warning: 'tasksinfile' may be used uninitialized in this function [-Wmaybe-uninitialized] if(tasksinfile) free(tasksinfile); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_mapped.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective_merge.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_buddy.c sion_generic_buddy.c: In function '_sion_coll_fread_buddy': sion_generic_buddy.c:951:94: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(b_sion_filedesc->fileptr,ownnewposition);b_sion_filedesc->currentpos=ownnewposition; ^ sion_generic_buddy.c: In function '_sion_coll_fwrite_buddy': sion_generic_buddy.c:791:102: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(sion_filedesc_coll->fileptr,ownnewposition);sion_filedesc_coll->currentpos=ownnewposition; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_apidesc.c sion_generic_buddy.c: In function '_sion_paropen_generic_buddy': sion_generic_buddy.c:427:24: warning: 'step' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[0]=step-1; /* step number */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_noreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:432:74: warning: 'stepcount_reader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:432:53: warning: 'stepcount_collreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_coll' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:327:43: warning: 'file_lgroup' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sion_gendata->grank == 0) helpint32=file_lgroup; ^ mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_lock.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_gen.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_cb_gen.c gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_omp_internal_gen.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_gen.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_deprecated.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_cb_gen.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_coll_cb_gen.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_internal_gen.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c -o sion_mpi_util.o sion_mpi_util.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_mpi_file_check.c sion_mpi_internal_gen.c: In function '_sion_get_filenumber_from_files_mpi': sion_mpi_internal_gen.c:276:32: warning: 'sid' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sid>=0) _sion_close_sid(sid); ^ mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_gen.c mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_cb_gen.c sion_ompi_gen.c: In function 'sion_paropen_ompi': sion_ompi_gen.c:302:5: warning: 'rc' may be used uninitialized in this function [-Wmaybe-uninitialized] return(_sion_errorprint_ompi(SION_ID_NOT_VALID,_SION_ERROR_RETURN,"sion_paropen_mpi: invalid return code from internal open %d", rc)); ^ sion_ompi_gen.c:251:66: warning: 'num_threads' may be used uninitialized in this function [-Wmaybe-uninitialized] thread_sync->lrank_master_ompi = _sion_map_rank_mpi_to_ompi(lRank,num_threads,thread_num); ^ mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_coll_cb_gen.c sion_ompi_cb_gen.c: In function '_sion_ompi_gatherr_cb': sion_ompi_cb_gen.c:319:7: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] help=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_scatterr_cb': sion_ompi_cb_gen.c:397:7: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] help=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_gathervr_cb': sion_ompi_cb_gen.c:620:35: warning: 'mcount' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_opmi_grc = MPI_Gatherv((sion_int64 *) help, mcount, SION_MPI_INT64, (sion_int64 *) outdata, mcounts, mdispls, SION_MPI_INT64, mroot, commgroup); ^ sion_ompi_cb_gen.c:492:10: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] tcounts=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_coll_cb_gen.c: In function '_sion_ompi_gather_process_cb': sion_ompi_coll_cb_gen.c:97:9: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] specs = (sion_int64 **)__sion_ompicol_share_ptr((void *) helpdata); ^ sion_ompi_cb_gen.c: In function '_sion_ompi_scattervr_cb': sion_ompi_cb_gen.c:686:10: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] tcounts=__sion_ompi_share_ptr((void *) helpdata); ^ sion_ompi_coll_cb_gen.c: In function '_sion_ompi_process_scatter_cb': sion_ompi_coll_cb_gen.c:316:9: warning: 'helpdata' may be used uninitialized in this function [-Wmaybe-uninitialized] specs = (sion_int64 **)__sion_ompicol_share_ptr((void *) helpdata); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c -o sion_ompi_util.o sion_ompi_util.c mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_ompi_internal_gen.c gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsiongen_64.so.1 -o libsiongen_64.so.1 sion_generic.o sion_generic_internal.o sion_generic_mapped.o sion_generic_collective.o sion_generic_collective_merge.o sion_generic_buddy.o sion_generic_apidesc.o sion_lock.o *** libsiongen_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionomp_64.so.1 -o libsionomp_64.so.1 sion_omp_gen.o sion_omp_cb_gen.o sion_omp_internal_gen.o sion_lock.o *** libsionomp_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionmpi_64.so.1 -o libsionmpi_64.so.1 sion_mpi_gen.o sion_mpi_deprecated.o sion_mpi_cb_gen.o sion_mpi_coll_cb_gen.o sion_mpi_internal_gen.o sion_mpi_util.o sion_mpi_file_check.o sion_lock.o *** libsionmpi_64.so.1 built ln -s libsiongen_64.so.1 libsiongen_64.so ln -s libsionomp_64.so.1 libsionomp_64.so ln -s libsionmpi_64.so.1 libsionmpi_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fopenmp -shared -Wl,-soname=libsionompi_64.so.1 -o libsionompi_64.so.1 sion_ompi_gen.o sion_ompi_cb_gen.o sion_ompi_coll_cb_gen.o sion_ompi_util.o sion_ompi_internal_gen.o sion_lock.o *** libsionompi_64.so.1 built ln -s libsionompi_64.so.1 libsionompi_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c siondump.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c siondefrag.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sionsplit.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sioncat.c sioncat.c: In function 'main': sioncat.c:229:21: warning: 'outfp' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_close(outfp); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sionversion.c gcc -o siondump siondump.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o siondefrag siondefrag.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none cp siondump ../.. gcc -o sionsplit sionsplit.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sioncat sioncat.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sionversion sionversion.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/cppinterface' g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_base.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_serial.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_common.cpp mpicxx -cxx="g++" -DSION_MPI -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_mpi.cpp gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_cxx_64.so.1 -o libsionser_cxx_64.so.1 sion_cxx_base.o sion_cxx_serial.o sion_cxx_common.o *** libsionser_cxx_64.so.1 built ln -s libsionser_cxx_64.so.1 libsionser_cxx_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_cxx_64.so.1 -o libsionmpi_cxx_64.so.1 sion_cxx_mpi.o ar -rcs libsionmpi_cxx_64.a sion_cxx_mpi.o *** libsionmpi_cxx_64.a built *** libsionmpi_cxx_64.so.1 built ln -s libsionmpi_cxx_64.so.1 libsionmpi_cxx_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/fortraninterface' gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f77.H > sion_f77.h gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f77.c gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_omp.f gcc -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_omp.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90.F90 > sion_f90.f90 gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f90.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_omp.F90 > sion_f90_omp.f90 mpif77 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_mpi.f mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_mpi.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_mpi_f77.c mpif77 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77_ompi.f mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_ompi.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_mpi.F90 > sion_f90_mpi.f90 mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_mpi_f90.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90_ompi.F90 > sion_f90_ompi.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77.f gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_f77_64.so.1 -o libsionmpi_f77_64.so.1 sion_f77_mpi.o sion_fortran_mpi.o sion_fortran_writeread_mpi_f77.o sion_f77_ompi.o sion_fortran_ompi.o mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_ompi.f90 *** libsionmpi_f77_64.so.1 built gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f77_64.so.1 -o libsionser_f77_64.so.1 sion_f77.o sion_fortran.o sion_fortran_writeread_f77.o sion_f77_omp.o sion_fortran_omp.o gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_omp.f90 *** libsionser_f77_64.so.1 built mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90_mpi.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f90_64.so.1 -o libsionser_f90_64.so.1 sion_f90.o sion_fortran.o sion_fortran_writeread_f90.o sion_f90_omp.o sion_fortran_omp.o *** libsionser_f90_64.so.1 built ln -s libsionser_f77_64.so.1 libsionser_f77_64.so ln -s libsionser_f90_64.so.1 libsionser_f90_64.so gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionmpi_f90_64.so.1 -o libsionmpi_f90_64.so.1 sion_f90_mpi.o sion_fortran_mpi.o sion_fortran_writeread_mpi_f90.o sion_f90_ompi.o sion_fortran_ompi.o *** libsionmpi_f90_64.so.1 built make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parutils' mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_split_comm.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_sionfile.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_mpiio.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_tasklocalfile.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_util.c mpicc -cc="gcc" -DSION_MPI -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c partest_opts.c mpicc -cc="gcc" -DSION_OMPI -fopenmp -DSION_OMP -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c ompi_partest.c mpicc -cc="gcc" -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c ompi_partest_sionfile.c mpicc -cc="gcc" -DSION_OMP -fopenmp -DSION_OMPI -fopenmp -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -DGIT_REV='"e7c4192"' -c omp_partest_sionfile.c ompi_partest_sionfile.c: In function 'test_paropen_multi_ompi': ompi_partest_sionfile.c:150:20: warning: 'fd' may be used uninitialized in this function [-Wmaybe-uninitialized] bwrote = write(fd, localbuffer, 1*bwrite); ^ omp_partest_sionfile.c: In function 'test_paropen_omp': omp_partest_sionfile.c:120:19: warning: 'fd' may be used uninitialized in this function [-Wmaybe-uninitialized] bwrote = write(fd, localbuffer, 1*bwrite); ^ mpif90 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c fpartest.F90 ln -s ../fortraninterface/libsionmpi_f77_64.so.1 ../fortraninterface/libsionmpi_f77_64.so mpicc -cc="gcc" -o partest partest.o partest_split_comm.o partest_sionfile.o partest_mpiio.o partest_tasklocalfile.o partest_util.o partest_opts.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionmpi_64 -L../lib -lsiongen_64 -L../lib -lsioncom_64 -lsioncom_64_lock_pthreads -L../lib -lsionser_64 -lsionomp_64 mpicc -cc="gcc" -o ompi_partest ompi_partest.o ompi_partest_sionfile.o omp_partest_sionfile.o partest_opts.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionompi_64 -L../lib -lsiongen_64 -L../lib -lsioncom_64 -lsioncom_64_lock_pthreads -fopenmp -L../parlib -lsionser_64 -lsionompi_64 -lsionomp_64 mpif90 -o fpartest fpartest.o -L../fortraninterface -lsionser_f77_64 -lsionmpi_f77_64 -lsionompi_64 -lsionomp_64 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../parlib -lsionmpi_64 -L../lib -lsiongen_64 -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_pthreads make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build' make: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2' + . /etc/profile.d/modules.sh ++++ /bin/ps -p 41 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr + ./configure --prefix=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr --compiler=gnu --disable-mpi --disable-openmp WARNING: Installation directory /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr exists. Existing content will be overwritten when installing. Configuration for Linux cluster with GNU compilers and no MPI - Setting up build configuration (build-linux-gomp-nompi) - Generating GNUmakefile (using Makefile.basic) - Generating Makefile.defs (using Makefile.defs.linux-gomp + optional.defs + lock.defs) Configuring Makefile.defs - Setting PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr - Configuring for gnu v4.8.5 compilers - Using gfortran instead of g77 - Configuring no MPI library - Disabling ompi support - Using default 64-bit compilation mode NOTE: Configured for PTHREADS support (using mutex_lock/unlock) #################################################################### CONFIGURATION COMPLETE Next steps: - cd build-linux-gomp-nompi - [optional] Edit Makefile.defs for further configuration - make - make install #################################################################### + /usr/bin/make -j2 -C build-linux-gomp-nompi 'OPTFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC' PFLAG= 'F77=gfortran ' 'F90=gfortran ' make: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi' make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi' ++++++++++ SETUP ++++++++++++++++++++++++++++++ mkdir build gcc ../config/lndir.c -o build/lndir cd build; ./lndir ../../src ../../src/lib: ../../src/parutils: ../../src/fortraninterface: ../../src/utils: ../../src/parlib: ../../src/cppinterface: mkdir build/mf cd build/mf; ../lndir ../../../mf cd build; rm -f RealMakefile; ln -s ../../mf/RealMakefile . cd build; rm -f GNUmakefile; ln -s RealMakefile GNUmakefile cd build; rm -f Makefile; \ ln -s ../../mf/Makefile.redirect Makefile cd build; rm -f Makefile.defs; ln -s ../Makefile.defs Makefile.defs mkdir build/examples cd build/examples; ../lndir ../../../examples ../../../examples/par_mandel: ../../../examples/pepc: ../../../examples/mp2c: ../../../examples/simple: ../../../examples/par_mandel_fortran: mkdir build/test cd build/test; ../lndir ../../../test ../../../test/serial: ../../../test/parallel: cd build/test; rm -f RealMakefile; ln -s ../../../mf/RealMakefile . make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/lib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_serial.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_common.o sion_common.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_fd.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_filedesc.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_file.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_metadata.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_tools.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_debug.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_error_handler.o sion_error_handler.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_printts.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_seek.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_collstat.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_internal_startptr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_convert.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buffer.o sion_buffer.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_linux.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_hints_gpfs.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_cache.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_dup.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_inline.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_table.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_keyvalue_keymngr.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_buddy_common.o sion_buddy_common.c sion_buddy_common.c: In function 'sion_get_io_info_buddy': sion_buddy_common.c:170:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p->sizes[c]=0; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c -o sion_flags.o sion_flags.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -DSION_USE_PTHREADS -c sion_lock.c -o sion_lock_pthreads.o gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -D_SION_LINUX -DSION_PTHREADS -I. -I../parlib -I../cppinterface -c sion_lock.c -o sion_lock_none.o ar -rcs libsionser_64.a sion_serial.o *** libsionser_64.a built ar -rcs libsioncom_64_lock_pthreads.a sion_lock_pthreads.o *** libsioncom_64_lock_pthreads.a built ar -rcs libsioncom_64_lock_none.a sion_lock_none.o *** libsioncom_64_lock_none.a built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_64.so.1 -o libsionser_64.so.1 sion_serial.o *** libsionser_64.so.1 built gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_pthreads.so.1 -o libsioncom_64_lock_pthreads.so.1 sion_lock_pthreads.o gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64_lock_none.so.1 -o libsioncom_64_lock_none.so.1 sion_lock_none.o *** libsioncom_64_lock_pthreads.so.1 built ar -rcs libsioncom_64.a sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64_lock_none.so.1 built ln -s libsionser_64.so.1 libsionser_64.so gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsioncom_64.so.1 -o libsioncom_64.so.1 sion_common.o sion_fd.o sion_filedesc.o sion_file.o sion_metadata.o sion_tools.o sion_debug.o sion_error_handler.o sion_printts.o sion_internal.o sion_internal_seek.o sion_internal_collstat.o sion_internal_startptr.o sion_convert.o sion_buffer.o sion_hints.o sion_hints_linux.o sion_hints_gpfs.o sion_cache.o sion_dup.o sion_keyvalue.o sion_keyvalue_inline.o sion_keyvalue_table.o sion_keyvalue_keymngr.o sion_buddy_common.o sion_flags.o *** libsioncom_64.a built ln -s libsioncom_64_lock_pthreads.so.1 libsioncom_64_lock_pthreads.so ln -s libsioncom_64_lock_none.so.1 libsioncom_64_lock_none.so *** libsioncom_64.so.1 built ln -s libsioncom_64.so.1 libsioncom_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parlib' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_internal.c sion_generic.c: In function '_sion_generic_get_and_distribute_info_from_file': sion_generic.c:858:27: warning: 'tasksinfile' may be used uninitialized in this function [-Wmaybe-uninitialized] if(tasksinfile) free(tasksinfile); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_mapped.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_collective_merge.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_buddy.c sion_generic_buddy.c: In function '_sion_coll_fread_buddy': sion_generic_buddy.c:951:94: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(b_sion_filedesc->fileptr,ownnewposition);b_sion_filedesc->currentpos=ownnewposition; ^ sion_generic_buddy.c: In function '_sion_coll_fwrite_buddy': sion_generic_buddy.c:791:102: warning: 'ownnewposition' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_set_position(sion_filedesc_coll->fileptr,ownnewposition);sion_filedesc_coll->currentpos=ownnewposition; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_generic_apidesc.c sion_generic_buddy.c: In function '_sion_paropen_generic_buddy': sion_generic_buddy.c:427:24: warning: 'step' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[0]=step-1; /* step number */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_noreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:432:74: warning: 'stepcount_reader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:432:53: warning: 'stepcount_collreader' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[5]=stepcount_coll+stepcount_noreader+stepcount_collreader+stepcount_reader-1; /* to_index */ ^ sion_generic_buddy.c:431:34: warning: 'stepcount_coll' may be used uninitialized in this function [-Wmaybe-uninitialized] helpint7[4]=stepcount_coll+stepcount_noreader; /* from_index */ ^ sion_generic_buddy.c:327:43: warning: 'file_lgroup' may be used uninitialized in this function [-Wmaybe-uninitialized] if (sion_gendata->grank == 0) helpint32=file_lgroup; ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -D_SION_LINUX -c sion_lock.c gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsiongen_64.so.1 -o libsiongen_64.so.1 sion_generic.o sion_generic_internal.o sion_generic_mapped.o sion_generic_collective.o sion_generic_collective_merge.o sion_generic_buddy.o sion_generic_apidesc.o sion_lock.o *** libsiongen_64.so.1 built ln -s libsiongen_64.so.1 libsiongen_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c siondump.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c siondefrag.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sionsplit.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sioncat.c sioncat.c: In function 'main': sioncat.c:229:21: warning: 'outfp' may be used uninitialized in this function [-Wmaybe-uninitialized] _sion_file_close(outfp); ^ gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -I../cppinterface -D_SION_LINUX -DGIT_REV='"e7c4192"' -c sionversion.c gcc -o siondump siondump.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o siondefrag siondefrag.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none cp siondump ../.. gcc -o sionsplit sionsplit.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sioncat sioncat.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -o sionversion sionversion.o -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -L../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/cppinterface' g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_base.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_serial.cpp g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O3 -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -c sion_cxx_common.cpp gcc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_cxx_64.so.1 -o libsionser_cxx_64.so.1 sion_cxx_base.o sion_cxx_serial.o sion_cxx_common.o *** libsionser_cxx_64.so.1 built ln -s libsionser_cxx_64.so.1 libsionser_cxx_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/fortraninterface' gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f77.H > sion_f77.h gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran.c gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f77.c gcc -E -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -I. -I../lib -I../parlib -D_SION_LINUX -P -E -I ../lib sion_f90.F90 > sion_f90.f90 gcc -std=c99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -fPIC -I. -I../lib -I../parlib -D_FORTRANUNDERSCORE -c sion_fortran_writeread_f90.c gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -c sion_f77.f gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -ffree-form -DSION_PTHREADS -c sion_f90.f90 gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f77_64.so.1 -o libsionser_f77_64.so.1 sion_f77.o sion_fortran.o sion_fortran_writeread_f77.o gfortran -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -shared -Wl,-soname=libsionser_f90_64.so.1 -o libsionser_f90_64.so.1 sion_f90.o sion_fortran.o sion_fortran_writeread_f90.o *** libsionser_f77_64.so.1 built ln -s libsionser_f77_64.so.1 libsionser_f77_64.so *** libsionser_f90_64.so.1 built ln -s libsionser_f90_64.so.1 libsionser_f90_64.so make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parutils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build' make: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi' + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gEPZlv + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 ++ dirname /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 + cd sionlib + . /etc/profile.d/modules.sh ++++ /bin/ps -p 3432 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + make install INCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi -C build-linux-gomp-openmpi make: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/lib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parlib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/cppinterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/fortraninterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parutils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build' cd build; make -f RealMakefile install make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build' mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/include make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/lib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_common.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_serial.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_const.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_datatypes.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_platform.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_debug.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/lib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parlib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_generic.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsiongen_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsiongen_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionomp_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionomp_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionompi_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionompi_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parlib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 siondump /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 siondefrag /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 sionsplit /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 sioncat /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 sionversion /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parutils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 partest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 ompi_partest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin ../../config/install-sh -c -m 755 fpartest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/parutils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' AINSTDIR=`(cd /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi && pwd)`; \ sed -e "s!@ARCH@!LINUX!" \ -e "s!@INSTDIR@!$AINSTDIR!" \ -e "s!@LIBNAME@!!" \ -e "s!@LIBSERNAME@!sionser_64!" \ -e "s!@HINTSLIB@!!" \ -e "s!@CACHELIB@!!" \ -e "s!@PTHREADSUPPORT@!yes !" \ -e "s!@CUDA_LIBRARIES@!!" \ -e "s!@CUDA_LIBRARY_PATHS@!!" \ -e "s!@SIONFWD_LIBS@!!" \ sionconfig.in > /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/sionconfig chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/sionconfig; \ make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/utils' ++++++++++ EXAMPLES +++++++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples ./../config/install-sh -c -m 644 examples/parallel_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples ./../config/install-sh -c -m 644 examples/parallel_read_nocol.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples ./../config/install-sh -c -m 644 examples/parallel_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples ./../config/install-sh -c -m 644 examples/serial_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples ./../config/install-sh -c -m 644 examples/serial_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples ++++++++++ EXAMPLES/simple ++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple ./../config/install-sh -c -m 644 examples/simple/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionser.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionpar.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionfortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple ./../config/install-sh -c -m 644 examples/simple/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple ++++++++++ EXAMPLES/par_mandel ++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/infostruct.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion_template.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel ++++++++++ EXAMPLES/par_mandel_fortran ++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/infostruct.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelmpi.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelseq.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion_template.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite_fortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/par_mandel_fortran ++++++++++ EXAMPLES/mp2c ++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/sionmp2c.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/mp2c_slv.res /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/cppinterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx_base.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx_serial.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx_common.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx_mpi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx_ompi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_cxx_omp.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/cppinterface' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/fortraninterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f77.H /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_f77.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64 ../../config/install-sh -c -m 644 sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_omp.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_mpi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_ompi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_f77_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionser_f90_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib ../../config/install-sh -c -m 644 libsionmpi_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build/fortraninterface' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi/build' make: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-openmpi' + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules/openmpi-x86_64 + mv /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64/sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64/sion_f90_mpi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64/sion_f90_omp.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64/sion_f90_ompi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules/openmpi-x86_64 + rmdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi-x86_64/mod_64 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 3432 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 3432 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi3-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi3-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi3/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi3-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi3-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi3/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi3-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi3' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi3' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi3-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi3/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi3-x86_64' ';export' 'MPI_MAN;MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON2_SITEARCH;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi3' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi3-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/openmpi3/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi3' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi3-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi3/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi3-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi3-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi3/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi3-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi3 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi3 ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi3-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi3/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi3-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3 ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi3 ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi3 ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi3-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi3/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi3 ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi3-x86_64 ++ export _LMFILES_ ~/build/BUILD/sionlib/ompi3 ~/build/BUILD/sionlib + pushd ompi3 + make install INCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3 -C build-linux-gomp-openmpi make: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/lib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parlib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/cppinterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/fortraninterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parutils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build' cd build; make -f RealMakefile install make[1]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build' mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/include make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/lib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_common.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_serial.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_const.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_datatypes.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_platform.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_debug.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/lib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parlib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_generic.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsiongen_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsiongen_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionomp_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionomp_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionompi_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionompi_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parlib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 siondump /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 siondefrag /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 sionsplit /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 sioncat /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 sionversion /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parutils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 partest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 ompi_partest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin ../../config/install-sh -c -m 755 fpartest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/parutils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' AINSTDIR=`(cd /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3 && pwd)`; \ sed -e "s!@ARCH@!LINUX!" \ -e "s!@INSTDIR@!$AINSTDIR!" \ -e "s!@LIBNAME@!!" \ -e "s!@LIBSERNAME@!sionser_64!" \ -e "s!@HINTSLIB@!!" \ -e "s!@CACHELIB@!!" \ -e "s!@PTHREADSUPPORT@!yes !" \ -e "s!@CUDA_LIBRARIES@!!" \ -e "s!@CUDA_LIBRARY_PATHS@!!" \ -e "s!@SIONFWD_LIBS@!!" \ sionconfig.in > /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/sionconfig chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/sionconfig; \ make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/utils' ++++++++++ EXAMPLES +++++++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples ./../config/install-sh -c -m 644 examples/parallel_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples ./../config/install-sh -c -m 644 examples/parallel_read_nocol.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples ./../config/install-sh -c -m 644 examples/parallel_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples ./../config/install-sh -c -m 644 examples/serial_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples ./../config/install-sh -c -m 644 examples/serial_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples ++++++++++ EXAMPLES/simple ++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple ./../config/install-sh -c -m 644 examples/simple/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionser.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionpar.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionfortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple ./../config/install-sh -c -m 644 examples/simple/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple ++++++++++ EXAMPLES/par_mandel ++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/infostruct.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion_template.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel ++++++++++ EXAMPLES/par_mandel_fortran ++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/infostruct.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelmpi.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelseq.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion_template.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite_fortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/par_mandel_fortran ++++++++++ EXAMPLES/mp2c ++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/sionmp2c.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/mp2c_slv.res /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/cppinterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx_base.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx_serial.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx_common.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx_mpi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx_ompi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_cxx_omp.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/cppinterface' make[2]: Entering directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/fortraninterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f77.H /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_f77.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64 ../../config/install-sh -c -m 644 sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_omp.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_mpi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_ompi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_f77_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionser_f90_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib ../../config/install-sh -c -m 644 libsionmpi_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build/fortraninterface' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi/build' make: Leaving directory `/builddir/build/BUILD/sionlib/ompi3/build-linux-gomp-openmpi' + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules/openmpi3 + mv /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64/sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64/sion_f90_mpi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64/sion_f90_omp.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64/sion_f90_ompi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules/openmpi3 + rmdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/openmpi3-x86_64/mod_64 + popd ~/build/BUILD/sionlib + . /etc/profile.d/modules.sh ++++ /bin/ps -p 3432 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi3-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi3-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi3-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON2_SITEARCH;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 3432 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + make install INCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich -C build-linux-gomp-mpich2 make: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/lib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parlib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/cppinterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/fortraninterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parutils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build' cd build; make -f RealMakefile install make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build' mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/include make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/lib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_common.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_serial.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_const.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_datatypes.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_platform.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_debug.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsioncom_64_lock_none.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/lib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parlib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_generic.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsiongen_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsiongen_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionomp_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionomp_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionompi_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionompi_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parlib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 siondump /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 siondefrag /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 sionsplit /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 sioncat /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 sionversion /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parutils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 partest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 ompi_partest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin ../../config/install-sh -c -m 755 fpartest /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/parutils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' AINSTDIR=`(cd /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich && pwd)`; \ sed -e "s!@ARCH@!LINUX!" \ -e "s!@INSTDIR@!$AINSTDIR!" \ -e "s!@LIBNAME@!!" \ -e "s!@LIBSERNAME@!sionser_64!" \ -e "s!@HINTSLIB@!!" \ -e "s!@CACHELIB@!!" \ -e "s!@PTHREADSUPPORT@!yes !" \ -e "s!@CUDA_LIBRARIES@!!" \ -e "s!@CUDA_LIBRARY_PATHS@!!" \ -e "s!@SIONFWD_LIBS@!!" \ sionconfig.in > /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/sionconfig chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/sionconfig; \ make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/utils' ++++++++++ EXAMPLES +++++++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples ./../config/install-sh -c -m 644 examples/parallel_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples ./../config/install-sh -c -m 644 examples/parallel_read_nocol.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples ./../config/install-sh -c -m 644 examples/parallel_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples ./../config/install-sh -c -m 644 examples/serial_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples ./../config/install-sh -c -m 644 examples/serial_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples ++++++++++ EXAMPLES/simple ++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple ./../config/install-sh -c -m 644 examples/simple/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionser.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionpar.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionfortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple ./../config/install-sh -c -m 644 examples/simple/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple ++++++++++ EXAMPLES/par_mandel ++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/infostruct.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion_template.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel ++++++++++ EXAMPLES/par_mandel_fortran ++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/infostruct.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelmpi.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelseq.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion_template.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite_fortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/par_mandel_fortran ++++++++++ EXAMPLES/mp2c ++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/sionmp2c.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/mp2c_slv.res /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/cppinterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx_base.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx_serial.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx_common.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx_mpi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx_ompi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_cxx_omp.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/cppinterface' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/fortraninterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f77.H /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_f77.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64 ../../config/install-sh -c -m 644 sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_omp.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_mpi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 ../../config/install-sh -c -m 644 sion_f90_ompi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_f77_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionser_f90_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib ../../config/install-sh -c -m 644 libsionmpi_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/lib make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build/fortraninterface' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2/build' make: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-mpich2' + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules/mpich-x86_64 + mv /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64/sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64/sion_f90_mpi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64/sion_f90_omp.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64/sion_f90_ompi.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules/mpich-x86_64 + rmdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mpich-x86_64/mod_64 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 3432 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + make install PREFIX=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr LIBDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 -C build-linux-gomp-nompi make: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi' cd build; make -f RealMakefile all make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build' ++++++++++ LIBS +++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/lib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/lib' ++++++++++ PARLIBS ++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parlib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parlib' ++++++++++ UTILS ++++++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' ++++++++++ CPPINTERFACE +++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/cppinterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/cppinterface' ++++++++++ FORTRANINTERFACE +++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/fortraninterface' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/fortraninterface' ++++++++++ PARUTILS +++++++++++++++++++++++++++ make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parutils' make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parutils' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build' cd build; make -f RealMakefile install make[1]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build' mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/lib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_common.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_serial.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_const.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_datatypes.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_platform.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_debug.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64_lock_none.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64_lock_pthreads.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsioncom_64_lock_none.a /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/lib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parlib' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_datatypes_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_mpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_ompi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_omp.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_generic.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsiongen_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsiongen_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parlib' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin ../../config/install-sh -c -m 755 siondump /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin ../../config/install-sh -c -m 755 siondefrag /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin ../../config/install-sh -c -m 755 sionsplit /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin ../../config/install-sh -c -m 755 sioncat /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin ../../config/install-sh -c -m 755 sionversion /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parutils' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/parutils' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' AINSTDIR=`(cd /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr && pwd)`; \ sed -e "s!@ARCH@!LINUX!" \ -e "s!@INSTDIR@!$AINSTDIR!" \ -e "s!@LIBNAME@!!" \ -e "s!@LIBSERNAME@!sionser_64!" \ -e "s!@HINTSLIB@!!" \ -e "s!@CACHELIB@!!" \ -e "s!@PTHREADSUPPORT@!yes !" \ -e "s!@CUDA_LIBRARIES@!!" \ -e "s!@CUDA_LIBRARY_PATHS@!!" \ -e "s!@SIONFWD_LIBS@!!" \ sionconfig.in > /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/sionconfig chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/sionconfig; \ make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/utils' ++++++++++ EXAMPLES +++++++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples ./../config/install-sh -c -m 644 examples/parallel_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples ./../config/install-sh -c -m 644 examples/parallel_read_nocol.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples ./../config/install-sh -c -m 644 examples/parallel_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples ./../config/install-sh -c -m 644 examples/serial_read.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples ./../config/install-sh -c -m 644 examples/serial_write.example /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples ++++++++++ EXAMPLES/simple ++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple ./../config/install-sh -c -m 644 examples/simple/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionser.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionpar.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple ./../config/install-sh -c -m 644 examples/simple/sionfortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple ./../config/install-sh -c -m 644 examples/simple/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple ++++++++++ EXAMPLES/par_mandel ++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/infostruct.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelmpi.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelseq.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/mandelsion_template.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ./../config/install-sh -c -m 644 examples/par_mandel/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel ++++++++++ EXAMPLES/par_mandel_fortran ++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/infostruct.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelmpi.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelseq.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/mandelsion_template.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite_fortran.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/ppmwrite.c /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ./../config/install-sh -c -m 644 examples/par_mandel_fortran/README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/par_mandel_fortran ++++++++++ EXAMPLES/mp2c ++++++++++++++++++++++ ./../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Makefile /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/sionmp2c.f90 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/mp2c_slv.res /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c ./../config/install-sh -c -m 644 examples/mp2c/Readme /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/cppinterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx_base.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx_serial.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx_common.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx_mpi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx_ompi.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_cxx_omp.hpp /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_cxx_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_cxx_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/cppinterface' make[2]: Entering directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/fortraninterface' ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mod_64 mkdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mod_64 chmod 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mod_64 ../../config/install-sh -c -m 644 sion_f77.H /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_f77.h /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include ../../config/install-sh -c -m 644 sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mod_64 ../../config/mkinstalldirs -m 755 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_f77_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_f90_64.so.1 /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_f77_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 ../../config/install-sh -c -m 644 libsionser_f90_64.so /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 make[2]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build/fortraninterface' make[1]: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi/build' make: Leaving directory `/builddir/build/BUILD/sionlib/build-linux-gomp-nompi' + mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules + mv /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mod_64/sion_f90.mod /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/gfortran/modules + rmdir /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/include/mod_64 ++ find /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 -name Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/mp2c/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/examples/simple/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/mp2c/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/examples/simple/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/mp2c/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/examples/simple/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/mp2c/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/examples/simple/Makefile.defs + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/sionconfig + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/sionconfig + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/sionconfig + for f in '$(find $RPM_BUILD_ROOT -name Makefile.defs)' '$RPM_BUILD_ROOT/usr/lib64/*/bin/sionconfig' '$RPM_BUILD_ROOT/usr/bin/sionconfig' + sed -i -e 's|/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64||' /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/sionconfig ++ find build-linux-gomp-mpich2/build/examples build-linux-gomp-nompi/build/examples build-linux-gomp-openmpi/build/examples -name Makefile.defs + find /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 -name examples + xargs rm -rf + find /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 -name '*.so.*' + xargs strip + find /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 -name '*.so.*' + xargs chmod +x + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 /builddir/build/BUILD/sionlib extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/sionversion extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/sioncat extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/sionsplit extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/siondefrag extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/bin/siondump extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/fpartest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/ompi_partest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/partest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/sionversion extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/sioncat extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/sionsplit extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/siondefrag extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/mpich/bin/siondump extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/fpartest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/ompi_partest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/partest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/sionversion extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/sioncat extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/sionsplit extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/siondefrag extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi3/bin/siondump extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/fpartest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/ompi_partest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/partest extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/sionversion extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/sioncat extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/sionsplit extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/siondefrag extracting debug info from /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64/openmpi/bin/siondump /usr/lib/rpm/sepdebugcrcfix: Updated 29 CRC32s, 0 CRC32s did match. cpio: sionlib/build-linux-gomp-mpich2/build/parutils/mpif.h: Cannot stat: No such file or directory cpio: sionlib/build-linux-gomp-openmpi/build/parutils/mpif-config.h: Cannot stat: No such file or directory cpio: sionlib/build-linux-gomp-openmpi/build/parutils/mpif-constants.h: Cannot stat: No such file or directory cpio: sionlib/build-linux-gomp-openmpi/build/parutils/mpif-handles.h: Cannot stat: No such file or directory cpio: sionlib/build-linux-gomp-openmpi/build/parutils/mpif-io-constants.h: Cannot stat: No such file or directory cpio: sionlib/build-linux-gomp-openmpi/build/parutils/mpif-io-handles.h: Cannot stat: No such file or directory cpio: sionlib/build-linux-gomp-openmpi/build/parutils/mpif-sentinels.h: Cannot stat: No such file or directory cpio: sionlib/ompi3/build-linux-gomp-openmpi/build/parutils/mpif-config.h: Cannot stat: No such file or directory cpio: sionlib/ompi3/build-linux-gomp-openmpi/build/parutils/mpif-constants.h: Cannot stat: No such file or directory cpio: sionlib/ompi3/build-linux-gomp-openmpi/build/parutils/mpif-handles.h: Cannot stat: No such file or directory cpio: sionlib/ompi3/build-linux-gomp-openmpi/build/parutils/mpif-io-constants.h: Cannot stat: No such file or directory cpio: sionlib/ompi3/build-linux-gomp-openmpi/build/parutils/mpif-io-handles.h: Cannot stat: No such file or directory cpio: sionlib/ompi3/build-linux-gomp-openmpi/build/parutils/mpif-sentinels.h: Cannot stat: No such file or directory 1829 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.h682V8 + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/sionlib/build-linux-gomp-nompi/build/test/serial ~/build/BUILD/sionlib + cd sionlib + pushd build-linux-gomp-nompi/build/test/serial + make test LD_LIBRARY_PATH=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/lib64 PFLAG= Clean test directories rm -rf run_test_seropn_1 run_test_mandel_1 run_test_keyval_1 run_test_ktab___1 run_test_ktab___2 run_test_kmngr__1 run_test_seek___1 run_test_flags__1 run_test_2read__1 run_test_file___1 run_test_file___2 run_test_file___3 run_test_file___4 run_test_swap___1 run_test_fsropn_1 run_test_Fsropn_1 rm -rf kcov_output gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_seropn_1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_mandel_1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_keyval_1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_ktab___1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_ktab___2.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_kmngr__1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_seek___1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_flags__1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_2read__1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_file___1.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_file___2.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_file___3.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_file___4.c gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_swap___1.c gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_seropn_1 test_seropn_1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_mandel_1 test_mandel_1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_keyval_1 test_keyval_1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_ktab___1 test_ktab___1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_ktab___2 test_ktab___2.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_kmngr__1 test_kmngr__1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_seek___1 test_seek___1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_flags__1 test_flags__1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_2read__1 test_2read__1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_file___1 test_file___1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_file___2 test_file___2.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_file___3 test_file___3.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_file___4 test_file___4.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_swap___1 test_swap___1.o -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none cp ../../../siondump ./siondump env COVERAGE= sh ./test_seropn_1.run.sh test_seropn_1 ... OK env COVERAGE= sh ./test_mandel_1.run.sh test_mandel_1 ... OK env COVERAGE= sh ./test_keyval_1.run.sh test_keyval_1 ... OK env COVERAGE= sh ./test_ktab___1.run.sh test_ktab___1 ... OK env COVERAGE= sh ./test_ktab___2.run.sh test_ktab___2 ... OK env COVERAGE= sh ./test_kmngr__1.run.sh test_kmngr__1 ... OK env COVERAGE= sh ./test_seek___1.run.sh test_seek___1 ... OK env COVERAGE= sh ./test_flags__1.run.sh test_flags__1 ... OK env COVERAGE= sh ./test_2read__1.run.sh test_2read__1 ... OK env COVERAGE= sh ./test_file___1.run.sh test_file___1 ... OK env COVERAGE= sh ./test_file___2.run.sh test_file___2 ... OK env COVERAGE= sh ./test_file___3.run.sh test_file___3 ... OK env COVERAGE= sh ./test_file___4.run.sh test_file___4 ... OK env COVERAGE= sh ./test_swap___1.run.sh test_swap___1 ... OK gfortran -g -O0 -Wall -g -I. -I../../fortraninterface -I. -I../../lib -I../../parlib -c test_fsropn_1.f gfortran -g -O0 -Wall -g -I. -I../../fortraninterface -I. -I../../lib -I../../parlib -o test_fsropn_1 test_fsropn_1.o -L../../lib -L../../fortraninterface -lsionser_f77_64 -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none env COVERAGE= sh ./test_fsropn_1.run.sh test_fsropn_1 ... OK gfortran -g -O0 -Wall -g -I. -I../../fortraninterface -I. -I../../lib -I../../parlib -c test_Fsropn_1.f90 gfortran -g -O0 -Wall -ffree-form -g -I. -I../../fortraninterface -I. -I../../lib -I../../parlib -o test_Fsropn_1 test_Fsropn_1.o -I../../fortraninterface -L../../lib -L../../fortraninterface -lsionser_f90_64 -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none env COVERAGE= sh ./test_Fsropn_1.run.sh test_Fsropn_1 ... OK gcc -c -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX test_genapi_1.c gcc -std=c99 -g -O0 -Wall -fPIC -g -I. -I../../lib -I../../parlib -D_SION_LINUX -o test_genapi_1 test_genapi_1.o -L../../parlib -lsiongen_64 -g -O0 -Wall -L../../lib -lsionser_64 -lsioncom_64 -lsioncom_64_lock_none env COVERAGE= sh ./test_genapi_1.run.sh test_genapi_1 ... OK if [ "" = "kcov" ] && type kcov 2>&1 > /dev/null; then kcov --merge kcov_output run_test_*/kcov_output; fi + popd ~/build/BUILD/sionlib + exit 0 Processing files: sionlib-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ZM6wTO + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-1.7.6 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.c3wQRu + umask 022 + cd /builddir/build/BUILD + cd sionlib + LICENSEDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-1.7.6 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-1.7.6 + exit 0 Provides: libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_cxx_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) libsionser_f90_64.so.1()(64bit) sionlib = 1.7.6-3.el7 sionlib(x86-64) = 1.7.6-3.el7 Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /sbin/ldconfig Requires(postun): /sbin/ldconfig Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgfortran.so.3()(64bit) libm.so.6()(64bit) libquadmath.so.0()(64bit) libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsionser_64.so.1()(64bit) rtld(GNU_HASH) Processing files: sionlib-devel-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.bH5u1a + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-devel-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-devel-1.7.6 + cp -pr doc/customdoxygen.css doc/inputs /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-devel-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-devel-1.7.6 + cp -pr build-linux-gomp-nompi/build/examples /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-devel-1.7.6 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.twIHcR + umask 022 + cd /builddir/build/BUILD + cd sionlib + LICENSEDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-devel-1.7.6 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-devel-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/licenses/sionlib-devel-1.7.6 + exit 0 Provides: sionlib-devel = 1.7.6-3.el7 sionlib-devel(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/sh Processing files: sionlib-openmpi-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ZLgBOx + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-1.7.6 + exit 0 Provides: libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionmpi_64.so.1()(64bit) libsionmpi_cxx_64.so.1()(64bit) libsionmpi_f77_64.so.1()(64bit) libsionmpi_f90_64.so.1()(64bit) libsionomp_64.so.1()(64bit) libsionompi_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_cxx_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) libsionser_f90_64.so.1()(64bit) sionlib-openmpi = 1.7.6-3.el7 sionlib-openmpi(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.3()(64bit) libgfortran.so.3(GFORTRAN_1.0)(64bit) libgfortran.so.3(GFORTRAN_1.4)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libm.so.6()(64bit) libmpi.so.12()(64bit) libmpi_mpifh.so.12()(64bit) libmpi_usempi.so.5()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libquadmath.so.0()(64bit) libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionmpi_64.so.1()(64bit) libsionmpi_f77_64.so.1()(64bit) libsionomp_64.so.1()(64bit) libsionompi_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) rtld(GNU_HASH) Processing files: sionlib-openmpi-devel-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.EXV1Ge + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-devel-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-devel-1.7.6 + cp -pr doc/customdoxygen.css doc/inputs /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-devel-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-devel-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-devel-1.7.6 + cp -pr build-linux-gomp-openmpi/build/examples /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi-devel-1.7.6 + exit 0 Provides: sionlib-openmpi-devel = 1.7.6-3.el7 sionlib-openmpi-devel(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/sh Processing files: sionlib-openmpi3-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.qweERV + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-1.7.6 + exit 0 Provides: libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionmpi_64.so.1()(64bit) libsionmpi_cxx_64.so.1()(64bit) libsionmpi_f77_64.so.1()(64bit) libsionmpi_f90_64.so.1()(64bit) libsionomp_64.so.1()(64bit) libsionompi_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_cxx_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) libsionser_f90_64.so.1()(64bit) sionlib-openmpi3 = 1.7.6-3.el7 sionlib-openmpi3(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.3()(64bit) libgfortran.so.3(GFORTRAN_1.0)(64bit) libgfortran.so.3(GFORTRAN_1.4)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libm.so.6()(64bit) libmpi.so.40()(64bit) libmpi_mpifh.so.40()(64bit) libmpi_usempi.so.40()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libquadmath.so.0()(64bit) libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionmpi_64.so.1()(64bit) libsionmpi_f77_64.so.1()(64bit) libsionomp_64.so.1()(64bit) libsionompi_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) rtld(GNU_HASH) Processing files: sionlib-openmpi3-devel-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.uuXRiD + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-devel-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-devel-1.7.6 + cp -pr doc/customdoxygen.css doc/inputs /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-devel-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-devel-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-devel-1.7.6 + cp -pr build-linux-gomp-openmpi/build/examples /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-openmpi3-devel-1.7.6 + exit 0 Provides: sionlib-openmpi3-devel = 1.7.6-3.el7 sionlib-openmpi3-devel(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/sh Processing files: sionlib-mpich-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.amSp2k + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-1.7.6 + exit 0 Provides: libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionmpi_64.so.1()(64bit) libsionmpi_cxx_64.so.1()(64bit) libsionmpi_f77_64.so.1()(64bit) libsionmpi_f90_64.so.1()(64bit) libsionomp_64.so.1()(64bit) libsionompi_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_cxx_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) libsionser_f90_64.so.1()(64bit) sionlib-mpich = 1.7.6-3.el7 sionlib-mpich(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.3()(64bit) libgfortran.so.3(GFORTRAN_1.0)(64bit) libgfortran.so.3(GFORTRAN_1.4)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libm.so.6()(64bit) libmpich.so.10()(64bit) libmpichf90.so.10()(64bit) libmpl.so.1()(64bit) libopa.so.1()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libquadmath.so.0()(64bit) librt.so.1()(64bit) libsioncom_64.so.1()(64bit) libsioncom_64_lock_none.so.1()(64bit) libsioncom_64_lock_pthreads.so.1()(64bit) libsiongen_64.so.1()(64bit) libsionmpi_64.so.1()(64bit) libsionmpi_f77_64.so.1()(64bit) libsionomp_64.so.1()(64bit) libsionompi_64.so.1()(64bit) libsionser_64.so.1()(64bit) libsionser_f77_64.so.1()(64bit) rtld(GNU_HASH) Processing files: sionlib-mpich-devel-1.7.6-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.skRx22 + umask 022 + cd /builddir/build/BUILD + cd sionlib + DOCDIR=/builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-devel-1.7.6 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-devel-1.7.6 + cp -pr doc/customdoxygen.css doc/inputs /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-devel-1.7.6 + cp -pr LICENSE /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-devel-1.7.6 + cp -pr README /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-devel-1.7.6 + cp -pr build-linux-gomp-mpich2/build/examples /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64/usr/share/doc/sionlib-mpich-devel-1.7.6 + exit 0 Provides: sionlib-mpich-devel = 1.7.6-3.el7 sionlib-mpich-devel(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/sh Processing files: sionlib-debuginfo-1.7.6-3.el7.x86_64 Provides: sionlib-debuginfo = 1.7.6-3.el7 sionlib-debuginfo(x86-64) = 1.7.6-3.el7 Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 Wrote: /builddir/build/RPMS/sionlib-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-devel-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-openmpi-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-openmpi-devel-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-openmpi3-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-openmpi3-devel-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-mpich-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-mpich-devel-1.7.6-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/sionlib-debuginfo-1.7.6-3.el7.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.HBz1ao + umask 022 + cd /builddir/build/BUILD + cd sionlib + /usr/bin/rm -rf /builddir/build/BUILDROOT/sionlib-1.7.6-3.el7.x86_64 + exit 0 Child return code was: 0