Mock Version: 2.4 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/R-float.spec'], chrootPath='/var/lib/mock/epel-8-aarch64-1597059491.809712/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xqtvtqcu:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xqtvtqcu:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'c85f4fca6396428eab27d30ac133f71e', '-D', '/var/lib/mock/epel-8-aarch64-1597059491.809712/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xqtvtqcu:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/R-float.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 Wrote: /builddir/build/SRPMS/R-float-0.2.4-1.el8.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/R-float.spec'], chrootPath='/var/lib/mock/epel-8-aarch64-1597059491.809712/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xqtvtqcu:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xqtvtqcu:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '7f43efa1990d4093bf5a899e435b2cee', '-D', '/var/lib/mock/epel-8-aarch64-1597059491.809712/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xqtvtqcu:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/R-float.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.wEaWU0 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf float + /usr/bin/mkdir -p float + cd float + /usr/bin/gzip -dc /builddir/build/SOURCES/float_0.2-4.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #1 (R-float-conf.patch):' Patch #1 (R-float-conf.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file float/configure.ac + rm -r float/src/lapack + cd float + autoconf + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.za3Kgi + umask 022 + cd /builddir/build/BUILD + cd float + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.IXMHwC + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64 ++ dirname /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64 + cd float + mkdir -p /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/lib64/R/library float * installing *source* package 'float' ... files 'src/lapack/LICENSE', 'src/lapack/combiner.sh', 'src/lapack/ilas.f', 'src/lapack/sblas.f', 'src/lapack/slamchf77.f', 'src/lapack/slapack1.f', 'src/lapack/slapack2.f', 'src/lapack/slapack3.f', 'src/lapack/slapack4.f' are missing files 'configure', 'configure.ac' have the wrong MD5 checksums ** using staged installation checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for gcc option to accept ISO C99... none needed checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking for sinf in -lm... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking for gcc option to support OpenMP... -fopenmp checking for echo... yes checking for grep... yes checking for sgemm_ in -lopenblas... yes checking for sgetrf_ in -lopenblas... yes ******************* Results of float package configure ******************* * OpenMP Report: >> OPENMP_CFLAGS=-fopenmp >> OMPFLAGS_C=$(SHLIB_OPENMP_CFLAGS) * byte order: little endian * using system BLAS library >> BLAS_LIBS=-lopenblas * using system LAPACK library >> LAPACK_LIBS= ************************************************************************* configure: creating ./config.status config.status: creating src/endianness.h configure: creating ./config.status config.status: creating src/endianness.h config.status: creating src/Makevars ** libs gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c backsolve.c -o backsolve.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c binary.c -o binary.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c chol.c -o chol.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c chol2inv.c -o chol2inv.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c colSums.c -o colSums.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c cond.c -o cond.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c converters.c -o converters.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c crossprod.c -o crossprod.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eigen.c -o eigen.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extremes.c -o extremes.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c float_native.c -o float_native.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c isSymmetric.c -o isSymmetric.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c machine.c -o machine.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c math.c -o math.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c matmult.c -o matmult.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c NA.c -o NA.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c norm.c -o norm.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c qr.c -o qr.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c rand.c -o rand.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scale.c -o scale.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c sign.c -o sign.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c solve.c -o solve.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c sum.c -o sum.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c svd.c -o svd.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c sweep.c -o sweep.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c xpose.c -o xpose.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c utils/matmult.c -o utils/matmult.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c utils/symmetrize.c -o utils/symmetrize.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c utils/xpose.c -o utils/xpose.o gfortran -fno-optimize-sibling-calls -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -c slapack_wrap.f -o slapack_wrap.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o float.so backsolve.o binary.o chol.o chol2inv.o colSums.o cond.o converters.o crossprod.o eigen.o extremes.o float_native.o isSymmetric.o machine.o math.o matmult.o NA.o norm.o qr.o rand.o scale.o sign.o solve.o sum.o svd.o sweep.o xpose.o utils/matmult.o utils/symmetrize.o utils/xpose.o slapack_wrap.o -lopenblas -lgfortran -lm -fopenmp -lgfortran -lm -L/usr/lib64/R/lib -lR ar crs libfloat.a backsolve.o binary.o chol.o chol2inv.o colSums.o cond.o converters.o crossprod.o eigen.o extremes.o float_native.o isSymmetric.o machine.o math.o matmult.o NA.o norm.o qr.o rand.o scale.o sign.o solve.o sum.o svd.o sweep.o xpose.o utils/matmult.o utils/symmetrize.o utils/xpose.o slapack_wrap.o ranlib libfloat.a installing via 'install.libs.R' to /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/lib64/R/library/00LOCK-float/00new/float ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'backsolve' from package 'base' in package 'float' Creating a generic function for 'forwardsolve' from package 'base' in package 'float' Creating a generic function for 'chol2inv' from 'base' in package 'float' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'float' Creating a generic function for 'colSums' from package 'base' in package 'float' Creating a generic function for 'rowSums' from package 'base' in package 'float' Creating a generic function for 'colMeans' from package 'base' in package 'float' Creating a generic function for 'rowMeans' from package 'base' in package 'float' Creating a generic function for 'rcond' from 'base' in package 'float' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'float' Creating a generic function for 'typeof' from package 'base' in package 'float' Creating a generic function for 'storage.mode' from package 'base' in package 'float' Creating a generic function for 'crossprod' from package 'base' in package 'float' Creating a generic function for 'tcrossprod' from package 'base' in package 'float' Creating a generic function for 'diag' from package 'base' in package 'float' Creating a generic function for 'nrow' from package 'base' in package 'float' Creating a generic function for 'ncol' from package 'base' in package 'float' Creating a generic function for 'NROW' from package 'base' in package 'float' Creating a generic function for 'NCOL' from package 'base' in package 'float' Creating a generic function for 'eigen' from package 'base' in package 'float' Creating a generic function for 'which.min' from package 'base' in package 'float' Creating a generic function for 'which.max' from package 'base' in package 'float' Creating a generic function for 'rownames' from package 'base' in package 'float' Creating a generic function for 'rownames<-' from package 'base' in package 'float' Creating a generic function for 'colnames' from package 'base' in package 'float' Creating a generic function for 'colnames<-' from package 'base' in package 'float' Creating a generic function for 'norm' from package 'base' in package 'float' Creating a generic function for 'qr.Q' from package 'base' in package 'float' Creating a generic function for 'qr.R' from package 'base' in package 'float' Creating a generic function for 'qr.qy' from package 'base' in package 'float' Creating a generic function for 'qr.qty' from package 'base' in package 'float' Creating a generic function for 'La.svd' from package 'base' in package 'float' Creating a generic function for 'svd' from 'base' in package 'float' (from the saved implicit definition) Creating a generic function for 'svd' from package 'base' in package 'float' Creating a generic function for 'sweep' from package 'base' in package 'float' ** help *** installing help indices converting help for package 'float' finding HTML links ... done Machine_float html NA_float_ html NaNf html arithmetic html backsolve html bind html bracket html c html chol html chol2inv html colsums html comparison html converters html crossprod html diag html dims html eigen html extremes html float-package html float html float32-class html float32 html hyperbolic html is.float html isSymmetric html log html mathis html matmult html miscmath html na html names html norm html print-float32 html qr html rand html rcond html rep html round html scale html sign html solve html specialmath html sum html svd html sweep html trig html xpose html ** building package indices ** installing vignettes 'float.Rnw' ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (float) + rm -rf /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/lib64/R/library/R.css + test -d float/src + cd float/src + rm -f NA.o backsolve.o binary.o chol.o chol2inv.o colSums.o cond.o converters.o crossprod.o eigen.o extremes.o float_native.o isSymmetric.o machine.o math.o matmult.o norm.o qr.o rand.o scale.o sign.o slapack_wrap.o solve.o sum.o svd.o sweep.o xpose.o float.so Makevars + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 0.2.4-1.el8 --unique-debug-suffix -0.2.4-1.el8.aarch64 --unique-debug-src-base R-float-0.2.4-1.el8.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/float extracting debug info from /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/lib64/R/library/float/libs/float.so /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 182 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile '' 1 + /usr/lib/rpm/brp-python-hardlink + PYTHON3=/usr/libexec/platform-python + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.ZDQEf0 + umask 022 + cd /builddir/build/BUILD + cd float + /usr/bin/R CMD check float * using log directory '/builddir/build/BUILD/float/float.Rcheck' * using R version 4.0.2 (2020-06-22) * using platform: aarch64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'float/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'float' version '0.2-4' * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... WARNING Subdirectory 'float/src' contains apparent object files/libraries libfloat.a Object files/libraries should not be included in a source package. In addition to the above warning(s), found the following notes: Found the following apparent object files/libraries: src/utils/matmult.o src/utils/symmetrize.o src/utils/xpose.o Object files/libraries should not be included in a source package. * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'float' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'arithmetic.r' Running 'backsolve.r' Running 'bind.r' Running 'c.r' Running 'chol.r' Running 'chol2inv.r' Running 'colSums.r' Running 'comparison.r' Running 'cond.r' Running 'crossprod.r' Running 'diag.r' Running 'eigen.r' Running 'extremes.r' Running 'isSymmetric.r' Running 'math.r' Running 'matmult.r' Running 'na.r' Running 'norm.r' Running 'print.r' Running 'qr.r' Running 'rand.r' Running 'rep.r' Running 'scale.r' Running 'sign.r' Running 'solve.r' Running 'sum.r' Running 'svd.r' Running 'sweep.r' Running 'xpose.r' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... 'float.Rnw'... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 WARNING See '/builddir/build/BUILD/float/float.Rcheck/00check.log' for details. + exit 0 Processing files: R-float-0.2.4-1.el8.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.oSJpC7 + umask 022 + cd /builddir/build/BUILD + cd float + LICENSEDIR=/builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/share/licenses/R-float + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/share/licenses/R-float + cp -pr float/LICENSE /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64/usr/share/licenses/R-float + exit 0 Provides: R(float) = 0.2-4 R-float = 0.2.4-1.el8 R-float(aarch-64) = 0.2.4-1.el8 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(methods) R(tools) R(utils) R-core >= 3.6.0 ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.5()(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libopenblas.so.0()(64bit) libpthread.so.0()(64bit) rtld(GNU_HASH) Processing files: R-float-debugsource-0.2.4-1.el8.aarch64 Provides: R-float-debugsource = 0.2.4-1.el8 R-float-debugsource(aarch-64) = 0.2.4-1.el8 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-float-debuginfo-0.2.4-1.el8.aarch64 Provides: R-float-debuginfo = 0.2.4-1.el8 R-float-debuginfo(aarch-64) = 0.2.4-1.el8 debuginfo(build-id) = 4303296b651dabeaf9d4166e6c4ac14e62748aa9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-float-debugsource(aarch-64) = 0.2.4-1.el8 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64 Wrote: /builddir/build/RPMS/R-float-0.2.4-1.el8.aarch64.rpm Wrote: /builddir/build/RPMS/R-float-debugsource-0.2.4-1.el8.aarch64.rpm Wrote: /builddir/build/RPMS/R-float-debuginfo-0.2.4-1.el8.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.SdiN5w + umask 022 + cd /builddir/build/BUILD + cd float + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-float-0.2.4-1.el8.aarch64 + exit 0 Child return code was: 0