Warning: Permanently added '3.92.56.1' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8325555-fedora-40-aarch64 --chroot fedora-40-aarch64 Version: 1.2 PID: 24982 Logging PID: 24983 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 8325555, 'buildroot_pkgs': [], 'chroot': 'fedora-40-aarch64', 'enable_net': True, 'fedora_review': False, 'git_hash': 'e049df583eb222b1fb764eefcf45cdb70fa727f6', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/bluebat/testfield/ncbi', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ncbi', 'package_version': '6.1-26.1', 'project_dirname': 'testfield', 'project_name': 'testfield', 'project_owner': 'bluebat', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/bluebat/testfield/fedora-40-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'https://github.com/rpmsphere/$basearch/raw/master/', 'id': 'https_github_com_rpmsphere_basearch_raw_master', 'name': 'Additional repo https_github_com_rpmsphere_basearch_raw_master'}, {'baseurl': 'https://github.com/rpmsphere/noarch/raw/master/', 'id': 'https_github_com_rpmsphere_noarch_raw_master', 'name': 'Additional repo https_github_com_rpmsphere_noarch_raw_master'}, {'baseurl': 'https://github.com/rpmsphere/$basearch/raw/master/', 'id': 'https_github_com_rpmsphere_basearch_raw_master', 'name': 'Additional repo https_github_com_rpmsphere_basearch_raw_master'}, {'baseurl': 'https://github.com/rpmsphere/noarch/raw/master/', 'id': 'https_github_com_rpmsphere_noarch_raw_master', 'name': 'Additional repo https_github_com_rpmsphere_noarch_raw_master'}], 'sandbox': 'bluebat/testfield--bluebat', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'bluebat', 'tags': [], 'task_id': '8325555-fedora-40-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/bluebat/testfield/ncbi /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/bluebat/testfield/ncbi', '/var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi'... Running: git checkout e049df583eb222b1fb764eefcf45cdb70fa727f6 -- cmd: ['git', 'checkout', 'e049df583eb222b1fb764eefcf45cdb70fa727f6', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi rc: 0 stdout: stderr: Note: switching to 'e049df583eb222b1fb764eefcf45cdb70fa727f6'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at e049df5 automatic import of ncbi Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ncbi.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o ncbi.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/bluebat/testfield/ncbi/ncbi.tar.gz/md5/e84826b8d390ca1ec6d0dfcaaf4cb6aa/ncbi.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 65.2M 100 65.2M 0 0 265M 0 --:--:-- --:--:-- --:--:-- 266M INFO: Reading stdout from command: md5sum ncbi.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi/ncbi.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732876059.737082 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi/ncbi.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732876059.737082 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi/ncbi.spec) Config(fedora-40-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-bootstrap-1732876059.737082/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:40 INFO: Pulling image: registry.fedoraproject.org/fedora:40 INFO: Copy content of container registry.fedoraproject.org/fedora:40 to /var/lib/mock/fedora-40-aarch64-bootstrap-1732876059.737082/root INFO: Checking that registry.fedoraproject.org/fedora:40 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:40 with podman image mount INFO: image registry.fedoraproject.org/fedora:40 as /var/lib/containers/storage/overlay/75a7a3925191d54454342c1f7a2608a932252bfb28439be92fae365611aa0442/merged INFO: umounting image registry.fedoraproject.org/fedora:40 (/var/lib/containers/storage/overlay/75a7a3925191d54454342c1f7a2608a932252bfb28439be92fae365611aa0442/merged) with podman image umount INFO: Using 'dnf4' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf4 detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 63 kB/s | 1.9 kB 00:00 Additional repo https_github_com_rpmsphere_base 3.7 MB/s | 873 kB 00:00 Additional repo https_github_com_rpmsphere_noar 2.9 MB/s | 330 kB 00:00 fedora 24 MB/s | 19 MB 00:00 updates 34 MB/s | 11 MB 00:00 Dependencies resolved. ================================================================================ Package Architecture Version Repository Size ================================================================================ Installing: dnf5 aarch64 5.1.17-2.fc40 updates 651 k dnf5-plugins aarch64 5.1.17-2.fc40 updates 335 k Installing dependencies: fmt aarch64 10.2.1-5.fc40 updates 121 k libdnf5 aarch64 5.1.17-2.fc40 updates 911 k libdnf5-cli aarch64 5.1.17-2.fc40 updates 219 k sdbus-cpp aarch64 1.4.0-2.fc40 fedora 101 k Transaction Summary ================================================================================ Install 6 Packages Total download size: 2.3 M Installed size: 7.4 M Downloading Packages: (1/6): sdbus-cpp-1.4.0-2.fc40.aarch64.rpm 8.0 MB/s | 101 kB 00:00 (2/6): fmt-10.2.1-5.fc40.aarch64.rpm 53 MB/s | 121 kB 00:00 (3/6): dnf5-plugins-5.1.17-2.fc40.aarch64.rpm 20 MB/s | 335 kB 00:00 (4/6): dnf5-5.1.17-2.fc40.aarch64.rpm 34 MB/s | 651 kB 00:00 (5/6): libdnf5-cli-5.1.17-2.fc40.aarch64.rpm 86 MB/s | 219 kB 00:00 (6/6): libdnf5-5.1.17-2.fc40.aarch64.rpm 174 MB/s | 911 kB 00:00 -------------------------------------------------------------------------------- Total 13 MB/s | 2.3 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fmt-10.2.1-5.fc40.aarch64 1/6 Installing : libdnf5-5.1.17-2.fc40.aarch64 2/6 Installing : libdnf5-cli-5.1.17-2.fc40.aarch64 3/6 Installing : sdbus-cpp-1.4.0-2.fc40.aarch64 4/6 Installing : dnf5-5.1.17-2.fc40.aarch64 5/6 Installing : dnf5-plugins-5.1.17-2.fc40.aarch64 6/6 Running scriptlet: dnf5-plugins-5.1.17-2.fc40.aarch64 6/6 Installed: dnf5-5.1.17-2.fc40.aarch64 dnf5-plugins-5.1.17-2.fc40.aarch64 fmt-10.2.1-5.fc40.aarch64 libdnf5-5.1.17-2.fc40.aarch64 libdnf5-cli-5.1.17-2.fc40.aarch64 sdbus-cpp-1.4.0-2.fc40.aarch64 Complete! INFO: Switching package manager from dnf4 to the dnf5 (direct choice) Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-1732876059.737082/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.7.0-1.fc40.aarch64 python3-dnf-4.21.1-1.fc40.noarch yum-4.21.1-1.fc40.noarch dnf5-5.1.17-2.fc40.aarch64 dnf5-plugins-5.1.17-2.fc40.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 200.7 KiB/s | 16.3 KiB | 00m00s updates 100% | 287.7 KiB/s | 14.7 KiB | 00m00s Copr repository 100% | 108.3 KiB/s | 1.5 KiB | 00m00s Additional repo https_github_com_rpmsp 100% | 159.6 KiB/s | 3.0 KiB | 00m00s Additional repo https_github_com_rpmsp 100% | 144.3 KiB/s | 3.0 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.26-3.fc40 fedora 8.3 MiB bzip2 aarch64 1.0.8-18.fc40 fedora 427.5 KiB coreutils aarch64 9.4-9.fc40 updates 20.8 MiB cpio aarch64 2.15-1.fc40 fedora 1.2 MiB diffutils aarch64 3.10-5.fc40 fedora 2.1 MiB fedora-release-common noarch 40-40 updates 19.2 KiB findutils aarch64 1:4.9.0-9.fc40 updates 1.7 MiB gawk aarch64 5.3.0-3.fc40 fedora 4.2 MiB glibc-minimal-langpack aarch64 2.39-22.fc40 updates 0.0 B grep aarch64 3.11-7.fc40 fedora 1.1 MiB gzip aarch64 1.13-1.fc40 fedora 488.8 KiB info aarch64 7.1-2.fc40 fedora 613.5 KiB patch aarch64 2.7.6-24.fc40 fedora 390.5 KiB redhat-rpm-config noarch 288-1.fc40 updates 185.2 KiB rpm-build aarch64 4.19.1.1-1.fc40 fedora 1.2 MiB sed aarch64 4.9-1.fc40 fedora 1.0 MiB shadow-utils aarch64 2:4.15.1-4.fc40 updates 7.3 MiB tar aarch64 2:1.35-3.fc40 fedora 3.1 MiB unzip aarch64 6.0-63.fc40 fedora 726.4 KiB util-linux aarch64 2.40.2-1.fc40 updates 17.5 MiB which aarch64 2.21-41.fc40 fedora 248.1 KiB xz aarch64 1:5.4.6-3.fc40 fedora 2.3 MiB Installing dependencies: alternatives aarch64 1.27-1.fc40 updates 218.2 KiB ansible-srpm-macros noarch 1-16.fc40 updates 35.7 KiB audit-libs aarch64 4.0.2-1.fc40 updates 547.3 KiB authselect aarch64 1.5.0-6.fc40 updates 309.4 KiB authselect-libs aarch64 1.5.0-6.fc40 updates 931.8 KiB basesystem noarch 11-20.fc40 fedora 0.0 B binutils aarch64 2.41-37.fc40 updates 32.8 MiB binutils-gold aarch64 2.41-37.fc40 updates 3.1 MiB bzip2-libs aarch64 1.0.8-18.fc40 fedora 200.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc40 updates 2.4 MiB coreutils-common aarch64 9.4-9.fc40 updates 11.4 MiB cracklib aarch64 2.9.11-5.fc40 fedora 934.6 KiB crypto-policies noarch 20241011-1.git5930b9a.fc40 updates 158.0 KiB curl aarch64 8.6.0-10.fc40 updates 866.5 KiB cyrus-sasl-lib aarch64 2.1.28-19.fc40 fedora 3.1 MiB debugedit aarch64 5.0-18.fc40 updates 499.1 KiB dwz aarch64 0.15-8.fc40 updates 386.7 KiB ed aarch64 1.20.2-1.fc40 updates 282.7 KiB efi-srpm-macros noarch 5-11.fc40 fedora 40.1 KiB elfutils aarch64 0.192-6.fc40 updates 5.1 MiB elfutils-debuginfod-client aarch64 0.192-6.fc40 updates 400.0 KiB elfutils-default-yama-scope noarch 0.192-6.fc40 updates 1.8 KiB elfutils-libelf aarch64 0.192-6.fc40 updates 1.3 MiB elfutils-libs aarch64 0.192-6.fc40 updates 1.0 MiB fedora-gpg-keys noarch 40-2 updates 124.7 KiB fedora-release noarch 40-40 updates 0.0 B fedora-release-identity-basic noarch 40-40 updates 654.0 B fedora-repos noarch 40-2 updates 4.9 KiB file aarch64 5.45-4.fc40 fedora 267.4 KiB file-libs aarch64 5.45-4.fc40 fedora 10.0 MiB filesystem aarch64 3.18-8.fc40 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-14.fc40 fedora 55.3 KiB forge-srpm-macros noarch 0.3.2-1.fc40 updates 39.0 KiB fpc-srpm-macros noarch 1.3-12.fc40 fedora 144.0 B gdb-minimal aarch64 15.2-3.fc40 updates 14.6 MiB gdbm aarch64 1:1.23-6.fc40 fedora 928.2 KiB gdbm-libs aarch64 1:1.23-6.fc40 fedora 425.8 KiB ghc-srpm-macros noarch 1.9.1-1.fc40 updates 747.0 B glibc aarch64 2.39-22.fc40 updates 9.1 MiB glibc-common aarch64 2.39-22.fc40 updates 2.6 MiB glibc-gconv-extra aarch64 2.39-22.fc40 updates 49.1 MiB gmp aarch64 1:6.2.1-8.fc40 fedora 721.2 KiB gnat-srpm-macros noarch 6-5.fc40 fedora 1.0 KiB go-srpm-macros noarch 3.5.0-1.fc40 fedora 60.6 KiB jansson aarch64 2.13.1-9.fc40 fedora 220.4 KiB json-c aarch64 0.17-3.fc40 fedora 202.3 KiB kernel-srpm-macros noarch 1.0-23.fc40 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-3.fc40 fedora 226.3 KiB krb5-libs aarch64 1.21.3-2.fc40 updates 3.4 MiB libacl aarch64 2.3.2-1.fc40 fedora 196.0 KiB libarchive aarch64 3.7.2-7.fc40 updates 1.0 MiB libattr aarch64 2.5.2-3.fc40 fedora 196.5 KiB libblkid aarch64 2.40.2-1.fc40 updates 418.5 KiB libbrotli aarch64 1.1.0-3.fc40 fedora 1.1 MiB libcap aarch64 2.69-8.fc40 updates 1.4 MiB libcap-ng aarch64 0.8.4-4.fc40 fedora 417.0 KiB libcom_err aarch64 1.47.0-5.fc40 fedora 239.2 KiB libcurl aarch64 8.6.0-10.fc40 updates 856.8 KiB libeconf aarch64 0.6.2-2.fc40 updates 206.0 KiB libevent aarch64 2.1.12-12.fc40 fedora 1.5 MiB libfdisk aarch64 2.40.2-1.fc40 updates 482.8 KiB libffi aarch64 3.4.4-7.fc40 fedora 281.4 KiB libgcc aarch64 14.2.1-3.fc40 updates 350.2 KiB libgomp aarch64 14.2.1-3.fc40 updates 567.3 KiB libidn2 aarch64 2.3.7-1.fc40 fedora 457.1 KiB libmount aarch64 2.40.2-1.fc40 updates 483.9 KiB libnghttp2 aarch64 1.59.0-3.fc40 updates 262.1 KiB libnsl2 aarch64 2.0.1-1.fc40 fedora 221.9 KiB libpkgconf aarch64 2.1.1-2.fc40 updates 198.0 KiB libpsl aarch64 0.21.5-3.fc40 fedora 196.5 KiB libpwquality aarch64 1.4.5-9.fc40 fedora 1.1 MiB libselinux aarch64 3.7-5.fc40 updates 265.0 KiB libsemanage aarch64 3.7-2.fc40 updates 361.5 KiB libsepol aarch64 3.7-2.fc40 updates 873.9 KiB libsmartcols aarch64 2.40.2-1.fc40 updates 288.4 KiB libssh aarch64 0.10.6-5.fc40 fedora 581.1 KiB libssh-config noarch 0.10.6-5.fc40 fedora 277.0 B libstdc++ aarch64 14.2.1-3.fc40 updates 2.8 MiB libtasn1 aarch64 4.19.0-6.fc40 fedora 283.7 KiB libtirpc aarch64 1.3.6-1.fc40 updates 274.6 KiB libtool-ltdl aarch64 2.4.7-10.fc40 fedora 222.2 KiB libunistring aarch64 1.1-7.fc40 fedora 1.9 MiB libutempter aarch64 1.2.1-13.fc40 fedora 417.6 KiB libuuid aarch64 2.40.2-1.fc40 updates 197.5 KiB libverto aarch64 0.3.2-8.fc40 fedora 197.4 KiB libxcrypt aarch64 4.4.36-10.fc40 updates 399.5 KiB libxml2 aarch64 2.12.8-1.fc40 updates 2.2 MiB libzstd aarch64 1.5.6-1.fc40 updates 795.9 KiB lua-libs aarch64 5.4.6-5.fc40 fedora 393.0 KiB lua-srpm-macros noarch 1-13.fc40 fedora 1.3 KiB lz4-libs aarch64 1.9.4-6.fc40 fedora 261.4 KiB mpfr aarch64 4.2.1-4.fc40 updates 818.8 KiB ncurses-base noarch 6.4-12.20240127.fc40 fedora 326.2 KiB ncurses-libs aarch64 6.4-12.20240127.fc40 fedora 2.2 MiB ocaml-srpm-macros noarch 9-3.fc40 fedora 1.9 KiB openblas-srpm-macros noarch 2-16.fc40 fedora 104.0 B openldap aarch64 2.6.7-1.fc40 fedora 1.0 MiB openssl-libs aarch64 1:3.2.2-3.fc40 updates 7.8 MiB p11-kit aarch64 0.25.5-1.fc40 updates 2.8 MiB p11-kit-trust aarch64 0.25.5-1.fc40 updates 655.5 KiB package-notes-srpm-macros noarch 0.5-11.fc40 fedora 1.6 KiB pam aarch64 1.6.1-4.fc40 updates 11.0 MiB pam-libs aarch64 1.6.1-4.fc40 updates 607.0 KiB pcre2 aarch64 10.44-1.fc40 updates 905.3 KiB pcre2-syntax noarch 10.44-1.fc40 updates 251.6 KiB perl-srpm-macros noarch 1-53.fc40 fedora 861.0 B pkgconf aarch64 2.1.1-2.fc40 updates 238.7 KiB pkgconf-m4 noarch 2.1.1-2.fc40 updates 13.9 KiB pkgconf-pkg-config aarch64 2.1.1-2.fc40 updates 990.0 B popt aarch64 1.19-6.fc40 fedora 272.8 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.0-1.fc40 updates 1.9 KiB python-srpm-macros noarch 3.12-8.fc40 updates 50.6 KiB qt5-srpm-macros noarch 5.15.15-1.fc40 updates 500.0 B qt6-srpm-macros noarch 6.7.2-2.fc40 updates 456.0 B readline aarch64 8.2-8.fc40 fedora 689.1 KiB rpm aarch64 4.19.1.1-1.fc40 fedora 4.0 MiB rpm-build-libs aarch64 4.19.1.1-1.fc40 fedora 262.4 KiB rpm-libs aarch64 4.19.1.1-1.fc40 fedora 861.6 KiB rpm-sequoia aarch64 1.7.0-1.fc40 updates 2.3 MiB rust-srpm-macros noarch 26.3-1.fc40 updates 4.8 KiB setup noarch 2.14.5-2.fc40 fedora 720.4 KiB sqlite-libs aarch64 3.45.1-2.fc40 fedora 1.5 MiB systemd-libs aarch64 255.14-1.fc40 updates 2.5 MiB util-linux-core aarch64 2.40.2-1.fc40 updates 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc40 updates 212.2 KiB xz-libs aarch64 1:5.4.6-3.fc40 fedora 265.6 KiB zig-srpm-macros noarch 1-2.fc40 fedora 1.1 KiB zip aarch64 3.0-40.fc40 fedora 1.1 MiB zlib-ng-compat aarch64 2.1.7-2.fc40 updates 261.7 KiB zstd aarch64 1.5.6-1.fc40 updates 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation 308 MiB will be used (install 308 MiB, remove 0 B). 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100% | 442.4 MiB/s | 20.8 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc40 >>> Stop pre-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc40.no [109/155] Installing ca-certificates-0: 100% | 2.3 MiB/s | 2.4 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc4 >>> Stop post-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc40.n [110/155] Installing krb5-libs-0:1.21.3 100% | 262.1 MiB/s | 3.4 MiB | 00m00s [111/155] Installing libtirpc-0:1.3.6-1 100% | 135.0 MiB/s | 276.4 KiB | 00m00s [112/155] Installing gzip-0:1.13-1.fc40 100% | 160.9 MiB/s | 494.3 KiB | 00m00s [113/155] Installing authselect-libs-0: 100% | 132.1 MiB/s | 946.7 KiB | 00m00s [114/155] Installing libarchive-0:3.7.2 100% | 254.0 MiB/s | 1.0 MiB | 00m00s [115/155] Installing authselect-0:1.5.0 100% | 102.1 MiB/s | 313.8 KiB | 00m00s [116/155] Installing cracklib-0:2.9.11- 100% | 154.0 MiB/s | 946.0 KiB | 00m00s 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redhat-rpm-config- 100% | 62.5 MiB/s | 191.9 KiB | 00m00s [151/155] Installing rpm-build-0:4.19.1 100% | 301.1 MiB/s | 1.2 MiB | 00m00s [152/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [153/155] Installing util-linux-0:2.40. 100% | 350.7 MiB/s | 17.5 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.2-1.fc40.aarch64 >>> Stop post-install scriptlet: util-linux-0:2.40.2-1.fc40.aarch64 [154/155] Installing which-0:2.21-41.fc 100% | 122.2 MiB/s | 250.3 KiB | 00m00s [155/155] Installing info-0:7.1-2.fc40. 100% | 471.8 KiB/s | 613.9 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-8.fc40.aarch64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-8.fc40.aarch64 >>> Running post-transaction scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0 >>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-6.fc40.aarch64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-6.fc40.aarch64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.aarch64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.aarch64 >>> Running trigger-install scriptlet: glibc-common-0:2.39-22.fc40.aarch64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-22.fc40.aarch64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.27-1.fc40.aarch64 ansible-srpm-macros-1-16.fc40.noarch audit-libs-4.0.2-1.fc40.aarch64 authselect-1.5.0-6.fc40.aarch64 authselect-libs-1.5.0-6.fc40.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.41-37.fc40.aarch64 binutils-gold-2.41-37.fc40.aarch64 bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2024.2.69_v8.0.401-1.0.fc40.noarch coreutils-9.4-9.fc40.aarch64 coreutils-common-9.4-9.fc40.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20241011-1.git5930b9a.fc40.noarch curl-8.6.0-10.fc40.aarch64 cyrus-sasl-lib-2.1.28-19.fc40.aarch64 debugedit-5.0-18.fc40.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-8.fc40.aarch64 ed-1.20.2-1.fc40.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.192-6.fc40.aarch64 elfutils-debuginfod-client-0.192-6.fc40.aarch64 elfutils-default-yama-scope-0.192-6.fc40.noarch elfutils-libelf-0.192-6.fc40.aarch64 elfutils-libs-0.192-6.fc40.aarch64 fedora-gpg-keys-40-2.noarch fedora-release-40-40.noarch fedora-release-common-40-40.noarch fedora-release-identity-basic-40-40.noarch fedora-repos-40-2.noarch file-5.45-4.fc40.aarch64 file-libs-5.45-4.fc40.aarch64 filesystem-3.18-8.fc40.aarch64 findutils-4.9.0-9.fc40.aarch64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.2-1.fc40.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-15.2-3.fc40.aarch64 gdbm-1.23-6.fc40.aarch64 gdbm-libs-1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc40.noarch glibc-2.39-22.fc40.aarch64 glibc-common-2.39-22.fc40.aarch64 glibc-gconv-extra-2.39-22.fc40.aarch64 glibc-minimal-langpack-2.39-22.fc40.aarch64 gmp-6.2.1-8.fc40.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.5.0-1.fc40.noarch gpg-pubkey-a15b79cc-63d04c2c grep-3.11-7.fc40.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 json-c-0.17-3.fc40.aarch64 kernel-srpm-macros-1.0-23.fc40.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.3-2.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.2-7.fc40.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40.2-1.fc40.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.69-8.fc40.aarch64 libcap-ng-0.8.4-4.fc40.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.6.0-10.fc40.aarch64 libeconf-0.6.2-2.fc40.aarch64 libevent-2.1.12-12.fc40.aarch64 libfdisk-2.40.2-1.fc40.aarch64 libffi-3.4.4-7.fc40.aarch64 libgcc-14.2.1-3.fc40.aarch64 libgomp-14.2.1-3.fc40.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40.2-1.fc40.aarch64 libnghttp2-1.59.0-3.fc40.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.1-2.fc40.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.7-5.fc40.aarch64 libsemanage-3.7-2.fc40.aarch64 libsepol-3.7-2.fc40.aarch64 libsmartcols-2.40.2-1.fc40.aarch64 libssh-0.10.6-5.fc40.aarch64 libssh-config-0.10.6-5.fc40.noarch libstdc++-14.2.1-3.fc40.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.6-1.fc40.aarch64 libtool-ltdl-2.4.7-10.fc40.aarch64 libunistring-1.1-7.fc40.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40.2-1.fc40.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-10.fc40.aarch64 libxml2-2.12.8-1.fc40.aarch64 libzstd-1.5.6-1.fc40.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-4.fc40.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-16.fc40.noarch openldap-2.6.7-1.fc40.aarch64 openssl-libs-3.2.2-3.fc40.aarch64 p11-kit-0.25.5-1.fc40.aarch64 p11-kit-trust-0.25.5-1.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-4.fc40.aarch64 pam-libs-1.6.1-4.fc40.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.44-1.fc40.aarch64 pcre2-syntax-10.44-1.fc40.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-2.fc40.aarch64 pkgconf-m4-2.1.1-2.fc40.noarch pkgconf-pkg-config-2.1.1-2.fc40.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.16.0-1.fc40.noarch python-srpm-macros-3.12-8.fc40.noarch qt5-srpm-macros-5.15.15-1.fc40.noarch qt6-srpm-macros-6.7.2-2.fc40.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-288-1.fc40.noarch rpm-4.19.1.1-1.fc40.aarch64 rpm-build-4.19.1.1-1.fc40.aarch64 rpm-build-libs-4.19.1.1-1.fc40.aarch64 rpm-libs-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.7.0-1.fc40.aarch64 rust-srpm-macros-26.3-1.fc40.noarch sed-4.9-1.fc40.aarch64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-4.fc40.aarch64 sqlite-libs-3.45.1-2.fc40.aarch64 systemd-libs-255.14-1.fc40.aarch64 tar-1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40.2-1.fc40.aarch64 util-linux-core-2.40.2-1.fc40.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-4.fc40.aarch64 xz-5.4.6-3.fc40.aarch64 xz-libs-5.4.6-3.fc40.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.7-2.fc40.aarch64 zstd-1.5.6-1.fc40.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1359158400 Wrote: /builddir/build/SRPMS/ncbi-6.1-26.1.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-aarch64-1732876059.737082/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-1osum0dt/ncbi/ncbi.spec) Config(child) 0 minutes 22 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/ncbi-6.1-26.1.src.rpm) Config(fedora-40-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-bootstrap-1732876059.737082/root. INFO: reusing tmpfs at /var/lib/mock/fedora-40-aarch64-bootstrap-1732876059.737082/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-1732876059.737082/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.7.0-1.fc40.aarch64 python3-dnf-4.21.1-1.fc40.noarch yum-4.21.1-1.fc40.noarch dnf5-5.1.17-2.fc40.aarch64 dnf5-plugins-5.1.17-2.fc40.aarch64 Finish: chroot init Start: build phase for ncbi-6.1-26.1.src.rpm Start: build setup for ncbi-6.1-26.1.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1359158400 Wrote: /builddir/build/SRPMS/ncbi-6.1-26.1.src.rpm Updating and loading repositories: fedora 100% | 86.0 KiB/s | 16.3 KiB | 00m00s updates 100% | 489.2 KiB/s | 14.7 KiB | 00m00s Copr repository 100% | 116.6 KiB/s | 1.5 KiB | 00m00s Additional repo https_github_com_rpmsp 100% | 144.4 KiB/s | 3.0 KiB | 00m00s Additional repo https_github_com_rpmsp 100% | 159.5 KiB/s | 3.0 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: fontconfig-devel aarch64 2.15.0-6.fc40 updates 117.2 KiB libXft-devel aarch64 2.3.8-6.fc40 fedora 31.7 KiB libXmu-devel aarch64 1.2.1-1.fc40 updates 66.2 KiB libjpeg-turbo-devel aarch64 3.0.2-1.fc40 fedora 352.9 KiB libpng-devel aarch64 2:1.6.40-3.fc40 fedora 1.2 MiB motif-devel aarch64 2.3.4-33.fc40 fedora 2.4 MiB tcsh aarch64 6.24.10-3.fc40 fedora 1.4 MiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-12.fc40 fedora 192.7 KiB brotli aarch64 1.1.0-3.fc40 fedora 195.7 KiB brotli-devel aarch64 1.1.0-3.fc40 fedora 65.6 KiB bzip2-devel aarch64 1.0.8-18.fc40 fedora 309.8 KiB cairo aarch64 1.18.0-3.fc40 fedora 2.0 MiB cairo-devel aarch64 1.18.0-3.fc40 fedora 2.3 MiB cmake-filesystem aarch64 3.30.5-1.fc40 updates 0.0 B default-fonts-core-sans noarch 4.0-13.fc40 updates 11.9 KiB expat aarch64 2.6.3-1.fc40 updates 539.4 KiB fontconfig aarch64 2.15.0-6.fc40 updates 2.4 MiB fonts-filesystem noarch 1:2.0.5-14.fc40 fedora 0.0 B freetype aarch64 2.13.2-5.fc40 fedora 942.9 KiB freetype-devel aarch64 2.13.2-5.fc40 fedora 7.8 MiB gettext aarch64 0.22.5-4.fc40 updates 8.2 MiB gettext-envsubst aarch64 0.22.5-4.fc40 updates 234.8 KiB gettext-libs aarch64 0.22.5-4.fc40 updates 2.0 MiB gettext-runtime aarch64 0.22.5-4.fc40 updates 793.0 KiB glib2 aarch64 2.80.3-1.fc40 updates 16.5 MiB glib2-devel aarch64 2.80.3-1.fc40 updates 16.6 MiB gnutls aarch64 3.8.6-1.fc40 updates 3.4 MiB google-noto-fonts-common noarch 20240301-2.fc40 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240301-2.fc40 fedora 1.2 MiB graphite2 aarch64 1.3.14-15.fc40 fedora 495.7 KiB graphite2-devel aarch64 1.3.14-15.fc40 fedora 49.1 KiB harfbuzz aarch64 8.5.0-1.fc40 updates 3.0 MiB harfbuzz-devel aarch64 8.5.0-1.fc40 updates 5.7 MiB harfbuzz-icu aarch64 8.5.0-1.fc40 updates 195.5 KiB libICE aarch64 1.1.1-3.fc40 fedora 273.0 KiB libICE-devel aarch64 1.1.1-3.fc40 fedora 261.8 KiB libSM aarch64 1.2.4-3.fc40 fedora 253.3 KiB libSM-devel aarch64 1.2.4-3.fc40 fedora 18.8 KiB libX11 aarch64 1.8.10-2.fc40 updates 1.3 MiB libX11-common noarch 1.8.10-2.fc40 updates 1.1 MiB libX11-devel aarch64 1.8.10-2.fc40 updates 1.0 MiB libX11-xcb aarch64 1.8.10-2.fc40 updates 195.0 KiB libXau aarch64 1.0.11-6.fc40 fedora 242.8 KiB libXau-devel aarch64 1.0.11-6.fc40 fedora 6.4 KiB libXext aarch64 1.3.6-1.fc40 fedora 209.9 KiB libXext-devel aarch64 1.3.6-1.fc40 fedora 98.9 KiB libXft aarch64 2.3.8-6.fc40 fedora 256.4 KiB libXmu aarch64 1.2.1-1.fc40 updates 455.4 KiB libXp aarch64 1.0.4-6.fc40 fedora 223.5 KiB libXp-devel aarch64 1.0.4-6.fc40 fedora 39.4 KiB libXrandr aarch64 1.5.4-3.fc40 fedora 199.7 KiB libXrender aarch64 0.9.11-6.fc40 fedora 198.1 KiB libXrender-devel aarch64 0.9.11-6.fc40 fedora 50.1 KiB libXt aarch64 1.3.0-3.fc40 fedora 605.5 KiB libXt-devel aarch64 1.3.0-3.fc40 fedora 1.6 MiB libb2 aarch64 0.98.1-11.fc40 fedora 202.1 KiB libblkid-devel aarch64 2.40.2-1.fc40 updates 44.9 KiB libffi-devel aarch64 3.4.4-7.fc40 fedora 30.0 KiB libicu aarch64 74.2-1.fc40 fedora 35.9 MiB libicu-devel aarch64 74.2-1.fc40 fedora 5.7 MiB libjpeg-turbo aarch64 3.0.2-1.fc40 fedora 792.4 KiB libmount-devel aarch64 2.40.2-1.fc40 updates 63.5 KiB libpng aarch64 2:1.6.40-3.fc40 fedora 333.6 KiB libselinux-devel aarch64 3.7-5.fc40 updates 126.4 KiB libsepol-devel aarch64 3.7-2.fc40 updates 120.3 KiB libtextstyle aarch64 0.22.5-4.fc40 updates 263.2 KiB libuuid-devel aarch64 2.40.2-1.fc40 updates 40.9 KiB libxcb aarch64 1.17.0-2.fc40 updates 5.0 MiB libxcb-devel aarch64 1.17.0-2.fc40 updates 2.7 MiB libxkbfile aarch64 1.1.3-1.fc40 fedora 305.9 KiB libxml2-devel aarch64 2.12.8-1.fc40 updates 3.4 MiB motif aarch64 2.3.4-33.fc40 fedora 4.5 MiB mpdecimal aarch64 2.5.1-9.fc40 fedora 328.7 KiB nettle aarch64 3.9.1-6.fc40 fedora 953.6 KiB pcre2-devel aarch64 10.44-1.fc40 updates 2.0 MiB pcre2-utf16 aarch64 10.44-1.fc40 updates 645.8 KiB pcre2-utf32 aarch64 10.44-1.fc40 updates 645.7 KiB pixman aarch64 0.43.4-1.fc40 updates 718.2 KiB pixman-devel aarch64 0.43.4-1.fc40 updates 49.4 KiB python-pip-wheel noarch 23.3.2-2.fc40 updates 1.5 MiB python3 aarch64 3.12.7-1.fc40 updates 211.4 KiB python3-libs aarch64 3.12.7-1.fc40 updates 51.4 MiB python3-packaging noarch 23.2-4.fc40 fedora 421.1 KiB setxkbmap aarch64 1.3.4-3.fc40 fedora 199.2 KiB sysprof-capture-devel aarch64 46.0-1.fc40 fedora 276.9 KiB tzdata noarch 2024a-5.fc40 updates 1.6 MiB xhost aarch64 1.0.9-6.fc40 fedora 201.4 KiB xml-common noarch 0.6.3-63.fc40 fedora 78.4 KiB xmodmap aarch64 1.0.11-6.fc40 fedora 203.2 KiB xorg-x11-proto-devel noarch 2024.1-2.fc40 updates 1.7 MiB xorg-x11-xauth aarch64 1:1.1.2-6.fc40 fedora 204.1 KiB xorg-x11-xbitmaps noarch 1.1.3-2.fc40 fedora 179.3 KiB xorg-x11-xinit aarch64 1.4.2-2.fc40 fedora 308.3 KiB xrdb aarch64 1.2.2-3.fc40 fedora 202.6 KiB xz-devel aarch64 1:5.4.6-3.fc40 fedora 255.8 KiB zlib-ng-compat-devel aarch64 2.1.7-2.fc40 updates 106.8 KiB Transaction Summary: Installing: 96 packages Total size of inbound packages is 48 MiB. Need to download 4 MiB. After this operation 213 MiB will be used (install 213 MiB, remove 0 B). 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43.8 KiB | 00m00s [77/98] Installing libSM-devel-0:1.2.4- 100% | 19.2 MiB/s | 19.7 KiB | 00m00s [78/98] Installing libXt-devel-0:1.3.0- 100% | 128.0 MiB/s | 1.7 MiB | 00m00s [79/98] Installing libXmu-devel-0:1.2.1 100% | 68.6 MiB/s | 70.2 KiB | 00m00s [80/98] Installing brotli-0:1.1.0-3.fc4 100% | 191.8 MiB/s | 196.4 KiB | 00m00s [81/98] Installing brotli-devel-0:1.1.0 100% | 9.5 MiB/s | 68.0 KiB | 00m00s >>> Running pre-install scriptlet: xml-common-0:0.6.3-63.fc40.noarch >>> Stop pre-install scriptlet: xml-common-0:0.6.3-63.fc40.noarch [82/98] Installing xml-common-0:0.6.3-6 100% | 39.6 MiB/s | 81.1 KiB | 00m00s [83/98] Installing cairo-0:1.18.0-3.fc4 100% | 246.2 MiB/s | 2.0 MiB | 00m00s [84/98] Installing harfbuzz-0:8.5.0-1.f 100% | 273.7 MiB/s | 3.0 MiB | 00m00s [85/98] Installing freetype-0:2.13.2-5. 100% | 184.5 MiB/s | 944.6 KiB | 00m00s [86/98] Installing fontconfig-0:2.15.0- 100% | 2.3 MiB/s | 2.4 MiB | 00m01s >>> Running post-install scriptlet: 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tcsh-0:6.24.10-3.fc4 100% | 8.1 MiB/s | 1.4 MiB | 00m00s >>> Running post-install scriptlet: tcsh-0:6.24.10-3.fc40.aarch64 >>> Stop post-install scriptlet: tcsh-0:6.24.10-3.fc40.aarch64 >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-6.fc40.aarch64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-6.fc40.aarch64 >>> Running trigger-install scriptlet: glibc-common-0:2.39-22.fc40.aarch64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-22.fc40.aarch64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Running trigger-install scriptlet: glib2-0:2.80.3-1.fc40.aarch64 >>> Stop trigger-install scriptlet: glib2-0:2.80.3-1.fc40.aarch64 >>> Running trigger-install scriptlet: glib2-0:2.80.3-1.fc40.aarch64 >>> Stop trigger-install scriptlet: glib2-0:2.80.3-1.fc40.aarch64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-6.fc40.aarch64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-6.fc40.aarch64 Finish: build setup for ncbi-6.1-26.1.src.rpm Start: rpmbuild ncbi-6.1-26.1.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1359158400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.fKWVqE + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ncbi-6.1 + /usr/bin/mkdir -p ncbi-6.1 + cd ncbi-6.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ncbi.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/ncbi-6.1-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/ncbi-6.1-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . Patch #0 (ncbi-6.1-link-to-shared-motif.patch): + echo 'Patch #0 (ncbi-6.1-link-to-shared-motif.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/platform/linux64.ncbi.mk patching file ncbi/platform/linux.ncbi.mk + echo 'Patch #1 (ncbi-6.1-optflags.patch):' Patch #1 (ncbi-6.1-optflags.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/platform/linux64.ncbi.mk patching file ncbi/platform/linux.ncbi.mk patching file ncbi/platform/linux-x86.ncbi.mk + echo 'Patch #2 (ncbi-6.1-strncat-overflow.patch):' Patch #2 (ncbi-6.1-strncat-overflow.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/cdromlib/cdnewlib.c patching file ncbi/corelib/ncbierr.c patching file ncbi/corelib/ncbisgml.c + echo 'Patch #3 (ncbi-6.1-math-meaning.patch):' Patch #3 (ncbi-6.1-math-meaning.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/tools/readdb.c Hunk #1 succeeded at 4888 (offset 12 lines). Patch #4 (ncbi-6.1-null-pointer.patch): + echo 'Patch #4 (ncbi-6.1-null-pointer.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/vibrant/vibslate.c Hunk #1 succeeded at 1512 (offset 10 lines). Hunk #2 succeeded at 1541 (offset 10 lines). Hunk #3 succeeded at 2154 (offset 10 lines). Hunk #4 succeeded at 2310 (offset 10 lines). Hunk #5 succeeded at 2356 (offset 10 lines). + echo 'Patch #5 (ncbi-6.1-no-return.patch):' Patch #5 (ncbi-6.1-no-return.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/biostruc/cdd/thrdbwfi.c patching file ncbi/biostruc/cdd/thrdcpal.c patching file ncbi/biostruc/cdd/thrdcpll.c patching file ncbi/biostruc/cdd/thrdcprl.c patching file ncbi/biostruc/cdd/thrdcxei.c patching file ncbi/biostruc/cdd/thrdsalu.c patching file ncbi/biostruc/cdd/thrdsgoi.c patching file ncbi/biostruc/cdd/thrdslou.c patching file ncbi/biostruc/cdd/thrdspea.c patching file ncbi/biostruc/cdd/thrdspel.c patching file ncbi/biostruc/cdd/thrdspni.c patching file ncbi/biostruc/cdd/thrdttb0.c patching file ncbi/biostruc/cdd/thrdzsc.c patching file ncbi/tools/taxblast.c Patch #6 (ncbi-6.1-sequence-point.patch): + echo 'Patch #6 (ncbi-6.1-sequence-point.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file ncbi/api/samutil.c + chmod -x ncbi/doc/blast/web_blast.pl + chmod -x ncbi/doc/fwd_check.sh + chmod -x ncbi/doc/fa2htgs/updateHtgsDoc + cd ncbi/network/wwwblast + rm wwwblast.log psiblast.log rpsblast.log + sed -i s:/usr/local/bin/perl:/usr/bin/perl: config_setup.pl + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.yKq3rM + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ncbi-6.1 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + ./ncbi/make/makedis.csh lsb_release: Command not found. libs version is: ls: No match. the gcc version is: gcc: Command not found. Motif found at /usr/include/Xm Warning: Motif version 1.2 is recommended OpenGL found at /usr/include/GL platform is linux Linux 131c7766f9474ff48ba53e53f42fc4d2 6.11.8-300.fc41.aarch64 #1 SMP PREEMPT_DYNAMIC Thu Nov 14 20:51:17 UTC 2024 aarch64 GNU/Linux Disabling assert(). BLAST version is 2.2.26 make CFLAGS1="-DNDEBUG -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wno-format-security -c " LDFLAGS1="-O3" OTHERLIBS="-lm" SHELL="/bin/sh" LCL="lnx" RAN="ranlib" AR="ar" CC="gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_GNU_SOURCE" LIB30=libncbicn3d.a LIB28=libvibgif.a LIB4=libvibrant.a LIB20=libncbidesk.a LIB45=libddvlib.a VIBFLAG="-I/usr/X11R6/include -L/usr/X11R6/lib -DWIN_MOTIF" VIBLIBS="-L/usr/X11R6/lib -lXmu -lXm -Wl,-Bdynamic -lXft -lfontconfig -ljpeg -lpng -lXt -lSM -lICE -lXext -lXp -lX11 -ldl" all sh: line 1: make: command not found Fatal error building NCBI core libraries. Please be sure that you have X11 and Motif libraries installed. The NCBI toolkit FAQ at ftp://ftp.ncbi.nih.gov/toolbox/FAQ.html may be helpful. error: Bad exit status from /var/tmp/rpm-tmp.yKq3rM (%build) RPM build errors: Bad exit status from /var/tmp/rpm-tmp.yKq3rM (%build) Finish: rpmbuild ncbi-6.1-26.1.src.rpm Finish: build phase for ncbi-6.1-26.1.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-aarch64-1732876059.737082/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names ERROR: Exception(/var/lib/copr-rpmbuild/results/ncbi-6.1-26.1.src.rpm) Config(fedora-40-aarch64) 0 minutes 10 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_failure=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot ERROR: Command failed: # /usr/bin/systemd-nspawn -q -M 131c7766f9474ff48ba53e53f42fc4d2 -D /var/lib/mock/fedora-40-aarch64-1732876059.737082/root -a -u mockbuild --capability=cap_ipc_lock --rlimit=RLIMIT_NOFILE=10240 --capability=cap_ipc_lock --bind=/tmp/mock-resolv.ebqche_a:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/originals/ncbi.spec' Copr build error: Build failed