Warning: Permanently added '54.205.243.186' (ED25519) to the list of known hosts. Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-1wuuwxq9/python-pypet/python-pypet.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-1wuuwxq9/python-pypet --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1736345385.282830 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-1wuuwxq9/python-pypet/python-pypet.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-1wuuwxq9/python-pypet --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1736345385.282830 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-1wuuwxq9/python-pypet/python-pypet.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.0 INFO: Mock Version: 6.0 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1736345385.282830/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Tagging container image as mock-bootstrap-4332d41d-aeeb-4963-83e0-5b3e111f670a INFO: Checking that 4b6e09cb21b0b21e79a54d011edfb4c7969b61b24323a64261cbe34bd294d49e image matches host's architecture INFO: Copy content of container 4b6e09cb21b0b21e79a54d011edfb4c7969b61b24323a64261cbe34bd294d49e to /var/lib/mock/fedora-41-x86_64-bootstrap-1736345385.282830/root INFO: mounting 4b6e09cb21b0b21e79a54d011edfb4c7969b61b24323a64261cbe34bd294d49e with podman image mount INFO: image 4b6e09cb21b0b21e79a54d011edfb4c7969b61b24323a64261cbe34bd294d49e as /var/lib/containers/storage/overlay/8f016905ed6520775034a1d28a2ef6287295c05be42b7f9fb8c7a60231d9de29/merged INFO: umounting image 4b6e09cb21b0b21e79a54d011edfb4c7969b61b24323a64261cbe34bd294d49e (/var/lib/containers/storage/overlay/8f016905ed6520775034a1d28a2ef6287295c05be42b7f9fb8c7a60231d9de29/merged) with podman image umount INFO: Removing image mock-bootstrap-4332d41d-aeeb-4963-83e0-5b3e111f670a INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1736345385.282830/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-3.fc41.x86_64 dnf5-5.2.8.1-2.fc41.x86_64 dnf5-plugins-5.2.8.1-2.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 76.3 KiB/s | 22.4 KiB | 00m00s fedora 100% | 108.1 KiB/s | 29.7 KiB | 00m00s Copr repository 100% | 75.7 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 141.9 KiB/s | 3.8 KiB | 00m00s Repositories loaded. 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http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 989.0 B popt x86_64 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 456.0 B readline x86_64 8.2-10.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 493.2 KiB rpm x86_64 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 206.7 KiB rpm-libs x86_64 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 725.9 KiB rpm-sequoia x86_64 1.7.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.3 MiB rust-srpm-macros noarch 26.3-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 4.8 KiB setup noarch 2.15.0-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.4 MiB systemd-libs x86_64 256.10-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.0 MiB util-linux-core x86_64 2.40.2-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.5 MiB xxhash-libs x86_64 0.8.3-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 88.5 KiB xz-libs x86_64 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 214.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.1 KiB zip x86_64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 134.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 52 MiB. Need to download 0 B. After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B). 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100% | 147.9 MiB/s | 1.0 MiB | 00m00s [ 22/156] Installing glibc-gconv-extra- 100% | 224.7 MiB/s | 7.9 MiB | 00m00s [ 23/156] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s | 134.8 KiB | 00m00s [ 24/156] Installing xz-libs-1:5.6.2-2. 100% | 210.4 MiB/s | 215.5 KiB | 00m00s [ 25/156] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [ 26/156] Installing libuuid-0:2.40.2-4 100% | 0.0 B/s | 38.6 KiB | 00m00s [ 27/156] Installing readline-0:8.2-10. 100% | 241.8 MiB/s | 495.3 KiB | 00m00s [ 28/156] Installing popt-0:1.19-7.fc41 100% | 70.1 MiB/s | 143.5 KiB | 00m00s [ 29/156] Installing libblkid-0:2.40.2- 100% | 253.4 MiB/s | 259.5 KiB | 00m00s [ 30/156] Installing libxcrypt-0:4.4.37 100% | 265.9 MiB/s | 272.3 KiB | 00m00s [ 31/156] Installing libattr-0:2.5.2-4. 100% | 0.0 B/s | 29.5 KiB | 00m00s [ 32/156] Installing libacl-0:2.3.2-2.f 100% | 0.0 B/s | 40.7 KiB | 00m00s [ 33/156] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.2 KiB | 00m00s [ 34/156] Installing elfutils-libelf-0: 100% | 291.8 MiB/s | 1.2 MiB | 00m00s [ 35/156] Installing gmp-1:6.3.0-2.fc41 100% | 264.9 MiB/s | 813.7 KiB | 00m00s [ 36/156] Installing libstdc++-0:14.2.1 100% | 307.4 MiB/s | 2.8 MiB | 00m00s [ 37/156] Installing libeconf-0:0.6.2-3 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [ 38/156] Installing gdbm-libs-1:1.23-7 100% | 120.7 MiB/s | 123.6 KiB | 00m00s [ 39/156] Installing mpfr-0:4.2.1-5.fc4 100% | 271.4 MiB/s | 833.7 KiB | 00m00s [ 40/156] Installing gawk-0:5.3.0-4.fc4 100% | 247.4 MiB/s | 1.7 MiB | 00m00s [ 41/156] Installing dwz-0:0.15-8.fc41. 100% | 293.3 MiB/s | 300.3 KiB | 00m00s [ 42/156] Installing unzip-0:6.0-64.fc4 100% | 190.6 MiB/s | 390.3 KiB | 00m00s [ 43/156] Installing file-libs-0:5.45-7 100% | 551.9 MiB/s | 9.9 MiB | 00m00s [ 44/156] Installing file-0:5.45-7.fc41 100% | 11.4 MiB/s | 105.0 KiB | 00m00s >>> Running pre-install scriptlet: crypto-policies-0:20241029-1.git8baf557.fc41. >>> Finished pre-install scriptlet: crypto-policies-0:20241029-1.git8baf557.fc41 >>> Scriptlet output: >>> /var/tmp/rpm-tmp.mGPzdd: line 2: rm: command not found >>> [ 45/156] Installing crypto-policies-0: 100% | 26.6 MiB/s | 163.3 KiB | 00m00s [ 46/156] Installing libcap-ng-0:0.8.5- 100% | 69.4 MiB/s | 71.0 KiB | 00m00s [ 47/156] Installing audit-libs-0:4.0.2 100% | 162.8 MiB/s | 333.4 KiB | 00m00s [ 48/156] Installing pam-libs-0:1.6.1-7 100% | 137.9 MiB/s | 141.3 KiB | 00m00s [ 49/156] Installing libcap-0:2.70-4.fc 100% | 110.0 MiB/s | 225.2 KiB | 00m00s [ 50/156] Installing systemd-libs-0:256 100% | 248.7 MiB/s | 2.0 MiB | 00m00s [ 51/156] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 52/156] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 53/156] Installing libsepol-0:3.7-2.f 100% | 266.5 MiB/s | 818.8 KiB | 00m00s [ 54/156] Installing pcre2-0:10.44-1.fc 100% | 319.8 MiB/s | 654.9 KiB | 00m00s [ 55/156] Installing libselinux-0:3.7-5 100% | 178.0 MiB/s | 182.3 KiB | 00m00s [ 56/156] Installing sed-0:4.9-3.fc41.x 100% | 169.9 MiB/s | 869.7 KiB | 00m00s [ 57/156] Installing grep-0:3.11-9.fc41 100% | 167.2 MiB/s | 1.0 MiB | 00m00s [ 58/156] Installing findutils-1:4.10.0 100% | 232.2 MiB/s | 1.9 MiB | 00m00s [ 59/156] Installing xz-1:5.6.2-2.fc41. 100% | 200.8 MiB/s | 1.2 MiB | 00m00s [ 60/156] Installing libmount-0:2.40.2- 100% | 172.3 MiB/s | 352.9 KiB | 00m00s [ 61/156] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB | 00m00s [ 62/156] Installing libffi-0:3.4.6-3.f 100% | 85.7 MiB/s | 87.8 KiB | 00m00s [ 63/156] Installing alternatives-0:1.3 100% | 64.8 MiB/s | 66.4 KiB | 00m00s [ 64/156] Installing lua-libs-0:5.4.6-6 100% | 279.5 MiB/s | 286.2 KiB | 00m00s [ 65/156] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 66/156] Installing p11-kit-0:0.25.5-3 100% | 220.7 MiB/s | 2.2 MiB | 00m00s [ 67/156] Installing libunistring-0:1.1 100% | 288.5 MiB/s | 1.7 MiB | 00m00s [ 68/156] Installing libidn2-0:2.3.7-2. 100% | 109.1 MiB/s | 335.1 KiB | 00m00s [ 69/156] Installing libpsl-0:0.21.5-4. 100% | 79.7 MiB/s | 81.7 KiB | 00m00s [ 70/156] Installing p11-kit-trust-0:0. 100% | 38.4 MiB/s | 393.1 KiB | 00m00s [ 71/156] Installing openssl-libs-1:3.2 100% | 295.6 MiB/s | 7.7 MiB | 00m00s [ 72/156] Installing coreutils-0:9.5-11 100% | 211.4 MiB/s | 5.7 MiB | 00m00s [ 73/156] Installing ca-certificates-0: 100% | 3.2 MiB/s | 2.4 MiB | 00m01s [ 74/156] Installing gzip-0:1.13-2.fc41 100% | 128.4 MiB/s | 394.6 KiB | 00m00s [ 75/156] Installing authselect-libs-0: 100% | 136.3 MiB/s | 837.2 KiB | 00m00s [ 76/156] Installing cracklib-0:2.9.11- 100% | 61.1 MiB/s | 250.3 KiB | 00m00s [ 77/156] Installing libpwquality-0:1.4 100% | 84.0 MiB/s | 430.1 KiB | 00m00s [ 78/156] Installing rpm-sequoia-0:1.7. 100% | 290.5 MiB/s | 2.3 MiB | 00m00s [ 79/156] Installing libevent-0:2.1.12- 100% | 219.6 MiB/s | 899.5 KiB | 00m00s [ 80/156] Installing zstd-0:1.5.6-2.fc4 100% | 281.9 MiB/s | 1.7 MiB | 00m00s [ 81/156] Installing util-linux-core-0: 100% | 185.7 MiB/s | 1.5 MiB | 00m00s [ 82/156] Installing tar-2:1.35-4.fc41. 100% | 295.8 MiB/s | 3.0 MiB | 00m00s [ 83/156] Installing libsemanage-0:3.7- 100% | 96.1 MiB/s | 295.2 KiB | 00m00s [ 84/156] Installing shadow-utils-2:4.1 100% | 130.2 MiB/s | 4.2 MiB | 00m00s [ 85/156] Installing libutempter-0:1.2. 100% | 29.2 MiB/s | 59.7 KiB | 00m00s [ 86/156] Installing zip-0:3.0-41.fc41. 100% | 172.6 MiB/s | 707.1 KiB | 00m00s [ 87/156] Installing gdbm-1:1.23-7.fc41 100% | 113.7 MiB/s | 465.8 KiB | 00m00s [ 88/156] Installing cyrus-sasl-lib-0:2 100% | 288.3 MiB/s | 2.3 MiB | 00m00s [ 89/156] Installing libfdisk-0:2.40.2- 100% | 177.8 MiB/s | 364.1 KiB | 00m00s [ 90/156] Installing bzip2-0:1.0.8-19.f 100% | 97.8 MiB/s | 100.2 KiB | 00m00s [ 91/156] Installing libxml2-0:2.12.9-1 100% | 281.0 MiB/s | 1.7 MiB | 00m00s [ 92/156] Installing libarchive-0:3.7.4 100% | 226.7 MiB/s | 928.6 KiB | 00m00s [ 93/156] Installing add-determinism-0: 100% | 294.5 MiB/s | 2.4 MiB | 00m00s [ 94/156] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 95/156] Installing sqlite-libs-0:3.46 100% | 285.9 MiB/s | 1.4 MiB | 00m00s [ 96/156] Installing rpm-libs-0:4.20.0- 100% | 236.8 MiB/s | 727.4 KiB | 00m00s [ 97/156] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB | 00m00s [ 98/156] Installing patch-0:2.7.6-25.f 100% | 131.0 MiB/s | 268.2 KiB | 00m00s [ 99/156] Installing elfutils-default-y 100% | 255.4 KiB/s | 2.0 KiB | 00m00s [100/156] Installing elfutils-libs-0:0. 100% | 160.3 MiB/s | 656.7 KiB | 00m00s [101/156] Installing cpio-0:2.15-2.fc41 100% | 183.3 MiB/s | 1.1 MiB | 00m00s [102/156] Installing diffutils-0:3.10-8 100% | 227.2 MiB/s | 1.6 MiB | 00m00s [103/156] Installing libpkgconf-0:2.3.0 100% | 77.5 MiB/s | 79.3 KiB | 00m00s [104/156] Installing pkgconf-0:2.3.0-1. 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [105/156] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s [106/156] Installing libverto-0:0.3.2-9 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [107/156] Installing krb5-libs-0:1.21.3 100% | 257.7 MiB/s | 2.3 MiB | 00m00s [108/156] Installing libtirpc-0:1.3.6-1 100% | 194.7 MiB/s | 199.4 KiB | 00m00s [109/156] Installing libnsl2-0:2.0.1-2. 100% | 57.7 MiB/s | 59.1 KiB | 00m00s [110/156] Installing pam-0:1.6.1-7.fc41 100% | 134.1 MiB/s | 1.9 MiB | 00m00s [111/156] Installing libssh-0:0.10.6-8. 100% | 167.8 MiB/s | 515.4 KiB | 00m00s [112/156] Installing jansson-0:2.13.1-1 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [113/156] Installing libgomp-0:14.2.1-3 100% | 256.2 MiB/s | 524.8 KiB | 00m00s [114/156] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [115/156] Installing json-c-0:0.17-4.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [116/156] Installing xxhash-libs-0:0.8. 100% | 87.8 MiB/s | 89.9 KiB | 00m00s [117/156] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB | 00m00s [118/156] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s [119/156] Installing libtool-ltdl-0:2.4 100% | 65.7 MiB/s | 67.3 KiB | 00m00s [120/156] Installing openldap-0:2.6.8-6 100% | 156.1 MiB/s | 639.2 KiB | 00m00s [121/156] Installing libcurl-0:8.9.1-2. 100% | 266.7 MiB/s | 819.2 KiB | 00m00s [122/156] Installing elfutils-debuginfo 100% | 40.9 MiB/s | 83.8 KiB | 00m00s [123/156] Installing binutils-0:2.43.1- 100% | 291.4 MiB/s | 27.4 MiB | 00m00s [124/156] Installing elfutils-0:0.192-7 100% | 262.9 MiB/s | 2.6 MiB | 00m00s [125/156] Installing gdb-minimal-0:15.2 100% | 288.7 MiB/s | 13.0 MiB | 00m00s [126/156] Installing debugedit-0:5.1-2. 100% | 99.3 MiB/s | 203.3 KiB | 00m00s [127/156] Installing curl-0:8.9.1-2.fc4 100% | 55.7 MiB/s | 798.6 KiB | 00m00s [128/156] Installing rpm-0:4.20.0-1.fc4 100% | 147.4 MiB/s | 2.5 MiB | 00m00s [129/156] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [130/156] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [131/156] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [132/156] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [133/156] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [134/156] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [135/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/156] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [146/156] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [147/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/156] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 92.8 MiB/s | 190.1 KiB | 00m00s [151/156] Installing rpm-build-0:4.20.0 100% | 66.0 MiB/s | 202.8 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 133.9 MiB/s | 3.7 MiB | 00m00s [154/156] Installing authselect-0:1.5.0 100% | 52.7 MiB/s | 161.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s [156/156] Installing info-0:7.1-3.fc41. 100% | 344.9 KiB/s | 362.2 KiB | 00m01s Warning: skipped OpenPGP checks for 154 packages from repository: http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-3.fc41.x86_64 alternatives-1.31-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc41.x86_64 authselect-libs-1.5.0-8.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-5.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-3.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch coreutils-9.5-11.fc41.x86_64 coreutils-common-9.5-11.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241029-1.git8baf557.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.1-2.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-13.fc41.noarch elfutils-0.192-7.fc41.x86_64 elfutils-debuginfod-client-0.192-7.fc41.x86_64 elfutils-default-yama-scope-0.192-7.fc41.noarch elfutils-libelf-0.192-7.fc41.x86_64 elfutils-libs-0.192-7.fc41.x86_64 fedora-gpg-keys-41-1.noarch fedora-release-41-29.noarch fedora-release-common-41-29.noarch fedora-release-identity-basic-41-29.noarch fedora-repos-41-1.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-3.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-17.fc41.x86_64 glibc-common-2.40-17.fc41.x86_64 glibc-gconv-extra-2.40-17.fc41.x86_64 glibc-minimal-langpack-2.40-17.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc41.noarch grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 json-c-0.17-4.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-3.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-4.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-4.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-4.fc41.x86_64 libffi-3.4.6-3.fc41.x86_64 libgcc-14.2.1-3.fc41.x86_64 libgomp-14.2.1-3.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-4.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-5.fc41.x86_64 libsemanage-3.7-2.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-4.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.2.1-3.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-4.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.37-4.fc41.x86_64 libxml2-2.12.9-1.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc41.x86_64 openssl-libs-3.2.2-10.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-7.fc41.x86_64 pam-libs-1.6.1-7.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch 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zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-7.fc41.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1736345385.282830/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-1wuuwxq9/python-pypet/python-pypet.spec) Config(child) 0 minutes 11 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-pypet-0.6.1-7.fc41.src.rpm) Config(fedora-41-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1736345385.282830/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1736345385.282830/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1736345385.282830/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-3.fc41.x86_64 dnf5-5.2.8.1-2.fc41.x86_64 dnf5-plugins-5.2.8.1-2.fc41.x86_64 Finish: chroot init Start: build phase for python-pypet-0.6.1-7.fc41.src.rpm Start: build setup for python-pypet-0.6.1-7.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-7.fc41.src.rpm Updating and loading repositories: updates 100% | 338.9 KiB/s | 22.4 KiB | 00m00s fedora 100% | 280.4 KiB/s | 29.7 KiB | 00m00s Copr repository 100% | 75.7 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 159.6 KiB/s | 3.8 KiB | 00m00s Repositories loaded. 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0.6.3-65.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 78.4 KiB xpdf-libs x86_64 1:4.05-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.7 MiB zziplib x86_64 0.13.74-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 233.7 KiB Transaction Summary: Installing: 662 packages Total size of inbound packages is 460 MiB. 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[645/662] libxshmfence-0:1.3.2-5.fc41.x 100% | 1.9 MiB/s | 13.4 KiB | 00m00s [646/662] mesa-filesystem-0:24.3.2-2.fc 100% | 1.1 MiB/s | 20.9 KiB | 00m00s [647/662] mesa-libgbm-0:24.3.2-2.fc41.x 100% | 6.5 MiB/s | 46.8 KiB | 00m00s [648/662] lm_sensors-libs-0:3.6.0-20.fc 100% | 5.0 MiB/s | 40.7 KiB | 00m00s [649/662] spirv-tools-libs-0:2024.3-3.f 100% | 91.6 MiB/s | 1.5 MiB | 00m00s [650/662] libpciaccess-0:0.16-13.fc41.x 100% | 3.7 MiB/s | 26.5 KiB | 00m00s [651/662] giflib-0:5.2.2-2.fc41.x86_64 100% | 5.6 MiB/s | 51.9 KiB | 00m00s [652/662] libicu-0:74.2-2.fc41.x86_64 100% | 142.3 MiB/s | 10.4 MiB | 00m00s [653/662] teckit-0:2.5.12-3.fc41.x86_64 100% | 26.7 MiB/s | 355.4 KiB | 00m00s [654/662] texlive-everyshi-11:svn57001- 100% | 10.1 MiB/s | 145.1 KiB | 00m00s [655/662] texlive-xetexconfig-11:svn458 100% | 1.1 MiB/s | 9.2 KiB | 00m00s [656/662] texlive-lualatex-math-11:svn6 100% | 2.3 MiB/s | 18.5 KiB | 00m00s [657/662] texlive-ucharcat-11:svn38907- 100% | 2.2 MiB/s | 13.3 KiB | 00m00s [658/662] llvm-libs-0:19.1.5-1.fc41.x86 100% | 127.0 MiB/s | 30.0 MiB | 00m00s [659/662] texlive-notoccite-11:svn18129 100% | 307.9 KiB/s | 10.8 KiB | 00m00s [660/662] libwayland-server-0:1.23.0-2. 100% | 8.0 MiB/s | 41.1 KiB | 00m00s [661/662] hwdata-0:0.391-1.fc41.noarch 100% | 108.6 MiB/s | 1.6 MiB | 00m00s [662/662] mesa-dri-drivers-0:24.3.2-2.f 100% | 86.5 MiB/s | 28.0 MiB | 00m00s -------------------------------------------------------------------------------- [662/662] Total 100% | 137.2 MiB/s | 188.9 MiB | 00m01s Running transaction [ 1/664] Verify package files 100% | 434.0 B/s | 662.0 B | 00m02s >>> Running pre-transaction scriptlet: texlive-base-11:20230311-85.fc41.x86_64 >>> Finished pre-transaction scriptlet: texlive-base-11:20230311-85.fc41.x86_64 >>> [RPM] /var/lib/mock/fedora-41-x86_64-1736345385.282830/root/var/cache/dnf/co [ 2/664] Prepare transaction 100% | 2.3 KiB/s | 662.0 B | 00m00s [ 3/664] Installing texlive-base-11:20 100% | 372.9 MiB/s | 19.0 MiB | 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00m00s [349/664] Installing texlive-makecmds-1 100% | 0.0 B/s | 11.9 KiB | 00m00s [350/664] Installing texlive-alphalph-1 100% | 368.3 MiB/s | 377.1 KiB | 00m00s [351/664] Installing texlive-enumitem-1 100% | 0.0 B/s | 60.1 KiB | 00m00s [352/664] Installing texlive-underscore 100% | 0.0 B/s | 20.1 KiB | 00m00s [353/664] Installing texlive-hobsub-11: 100% | 80.0 MiB/s | 81.9 KiB | 00m00s [354/664] Installing texlive-hyperref-1 100% | 250.5 MiB/s | 769.4 KiB | 00m00s [355/664] Installing texlive-attachfile 100% | 32.4 MiB/s | 33.2 KiB | 00m00s [356/664] Installing texlive-euenc-11:s 100% | 41.2 MiB/s | 42.2 KiB | 00m00s [357/664] Installing texlive-kastrup-11 100% | 0.0 B/s | 4.2 KiB | 00m00s [358/664] Installing texlive-babel-engl 100% | 45.4 MiB/s | 46.5 KiB | 00m00s [359/664] Installing texlive-fix2col-11 100% | 0.0 B/s | 17.4 KiB | 00m00s [360/664] Installing texlive-latex-lab- 100% | 462.2 MiB/s | 2.3 MiB | 00m00s [361/664] Installing texlive-mfnfss-11: 100% | 24.2 MiB/s | 24.7 KiB | 00m00s [362/664] Installing texlive-mptopdf-11 100% | 149.9 MiB/s | 153.5 KiB | 00m00s [363/664] Installing texlive-pagesel-11 100% | 347.7 MiB/s | 356.1 KiB | 00m00s [364/664] Installing texlive-pslatex-11 100% | 28.5 MiB/s | 29.2 KiB | 00m00s [365/664] Installing texlive-pspicture- 100% | 14.4 MiB/s | 14.7 KiB | 00m00s [366/664] Installing texlive-cmextra-11 100% | 69.2 MiB/s | 141.8 KiB | 00m00s [367/664] Installing texlive-euro-ce-11 100% | 46.0 MiB/s | 47.1 KiB | 00m00s [368/664] Installing texlive-eurosym-11 100% | 219.4 MiB/s | 224.7 KiB | 00m00s [369/664] Installing texlive-manfnt-fon 100% | 42.1 MiB/s | 43.1 KiB | 00m00s [370/664] Installing texlive-mflogo-fon 100% | 41.0 MiB/s | 42.0 KiB | 00m00s [371/664] Installing texlive-ncntrsbk-1 100% | 156.0 MiB/s | 958.2 KiB | 00m00s [372/664] Installing texlive-pxfonts-11 100% | 138.9 MiB/s | 853.5 KiB | 00m00s [373/664] Installing texlive-rsfs-11:sv 100% | 99.8 MiB/s | 102.2 KiB | 00m00s [374/664] Installing texlive-tex-gyre-m 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texlive-mfware-11: 100% | 106.1 MiB/s | 217.4 KiB | 00m00s [388/664] Installing texlive-tex-11:svn 100% | 190.8 MiB/s | 390.8 KiB | 00m00s [389/664] Installing texlive-texlive-en 100% | 494.8 MiB/s | 5.9 MiB | 00m00s [390/664] Installing texlive-texlive-ms 100% | 351.6 MiB/s | 1.4 MiB | 00m00s [391/664] Installing texlive-changepage 100% | 0.0 B/s | 28.2 KiB | 00m00s [392/664] Installing texlive-ifmtarg-11 100% | 0.0 B/s | 9.9 KiB | 00m00s [393/664] Installing texlive-pdfcolmk-1 100% | 20.2 MiB/s | 20.7 KiB | 00m00s [394/664] Installing texlive-xcolor-11: 100% | 78.8 MiB/s | 80.7 KiB | 00m00s [395/664] Installing texlive-eso-pic-11 100% | 0.0 B/s | 28.6 KiB | 00m00s [396/664] Installing texlive-varwidth-1 100% | 0.0 B/s | 20.3 KiB | 00m00s [397/664] Installing texlive-fileconten 100% | 0.0 B/s | 13.0 KiB | 00m00s [398/664] Installing texlive-pst-math-1 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [399/664] Installing texlive-dehyph-11: 100% | 235.5 MiB/s | 241.2 KiB | 00m00s [400/664] Installing texlive-grffile-11 100% | 371.8 MiB/s | 380.7 KiB | 00m00s [401/664] Installing texlive-index-11:s 100% | 60.7 MiB/s | 62.1 KiB | 00m00s [402/664] Installing texlive-parallel-1 100% | 0.0 B/s | 23.3 KiB | 00m00s [403/664] Installing texlive-pdfcol-11: 100% | 338.7 MiB/s | 346.8 KiB | 00m00s [404/664] Installing texlive-lua-uni-al 100% | 128.2 MiB/s | 131.3 KiB | 00m00s [405/664] Installing texlive-lualibs-11 100% | 251.2 MiB/s | 771.6 KiB | 00m00s [406/664] Installing texlive-luaotfload 100% | 432.6 MiB/s | 8.2 MiB | 00m00s [407/664] Installing texlive-beton-11:s 100% | 0.0 B/s | 12.5 KiB | 00m00s [408/664] Installing texlive-euler-11:s 100% | 0.0 B/s | 21.4 KiB | 00m00s [409/664] Installing texlive-marginnote 100% | 0.0 B/s | 23.3 KiB | 00m00s [410/664] Installing texlive-mparhack-1 100% | 0.0 B/s | 21.1 KiB | 00m00s [411/664] Installing texlive-picture-11 100% | 317.1 MiB/s | 324.8 KiB | 00m00s [412/664] Installing texlive-xstring-11 100% | 0.0 B/s | 57.0 KiB | 00m00s 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perl-Number-Compar 100% | 0.0 B/s | 5.4 KiB | 00m00s [465/664] Installing perl-Text-Glob-0:0 100% | 0.0 B/s | 9.3 KiB | 00m00s [466/664] Installing perl-File-Find-Rul 100% | 43.4 MiB/s | 44.4 KiB | 00m00s [467/664] Installing perl-Data-Compare- 100% | 56.8 MiB/s | 58.1 KiB | 00m00s [468/664] Installing perl-Class-Data-In 100% | 0.0 B/s | 7.0 KiB | 00m00s [469/664] Installing perl-Exception-Cla 100% | 92.4 MiB/s | 94.6 KiB | 00m00s [470/664] Installing perl-PadWalker-0:2 100% | 45.6 MiB/s | 46.7 KiB | 00m00s [471/664] Installing perl-Devel-Caller- 100% | 28.4 MiB/s | 29.1 KiB | 00m00s [472/664] Installing perl-Devel-LexAlia 100% | 20.5 MiB/s | 21.0 KiB | 00m00s [473/664] Installing perl-Hash-Util-Fie 100% | 66.8 MiB/s | 68.4 KiB | 00m00s [474/664] Installing perl-Variable-Magi 100% | 129.6 MiB/s | 132.7 KiB | 00m00s [475/664] Installing perl-B-Hooks-EndOf 100% | 36.7 MiB/s | 75.1 KiB | 00m00s [476/664] Installing perl-English-0:1.1 100% | 0.0 B/s | 6.6 KiB | 00m00s [477/664] Installing perltidy-0:2024090 100% | 324.0 MiB/s | 3.9 MiB | 00m00s [478/664] Installing perl-Eval-Closure- 100% | 33.8 MiB/s | 34.6 KiB | 00m00s [479/664] Installing perl-Params-Valida 100% | 92.0 MiB/s | 94.2 KiB | 00m00s [480/664] Installing perl-Specio-0:0.48 100% | 112.2 MiB/s | 344.7 KiB | 00m00s [481/664] Installing perl-Package-Stash 100% | 69.4 MiB/s | 71.0 KiB | 00m00s [482/664] Installing perl-Package-Stash 100% | 56.8 MiB/s | 58.1 KiB | 00m00s [483/664] Installing perl-namespace-cle 100% | 43.5 MiB/s | 44.6 KiB | 00m00s [484/664] Installing perl-namespace-aut 100% | 41.6 MiB/s | 42.6 KiB | 00m00s [485/664] Installing perl-Log-Dispatch- 100% | 73.2 MiB/s | 150.0 KiB | 00m00s [486/664] Installing perl-Log-Dispatch- 100% | 53.2 MiB/s | 54.5 KiB | 00m00s [487/664] Installing perl-Log-Log4perl- 100% | 175.3 MiB/s | 897.8 KiB | 00m00s [488/664] Installing perl-Class-Inspect 100% | 57.9 MiB/s | 59.3 KiB | 00m00s [489/664] Installing perl-File-ShareDir 100% | 9.6 MiB/s | 59.2 KiB | 00m00s 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370.0 KiB | 00m00s [503/664] Installing avahi-libs-0:0.8-2 100% | 82.5 MiB/s | 168.9 KiB | 00m00s [504/664] Installing cups-filesystem-1: 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [505/664] Installing cups-libs-1:2.4.11 100% | 200.3 MiB/s | 615.5 KiB | 00m00s [506/664] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [507/664] Installing desktop-file-utils 100% | 114.3 MiB/s | 234.2 KiB | 00m00s [508/664] Installing xdg-utils-0:1.2.1- 100% | 170.7 MiB/s | 349.5 KiB | 00m00s [509/664] Installing libquadmath-0:14.2 100% | 159.7 MiB/s | 327.1 KiB | 00m00s [510/664] Installing flexiblas-0:3.4.4- 100% | 48.5 MiB/s | 49.7 KiB | 00m00s [511/664] Installing flexiblas-netlib-0 100% | 296.3 MiB/s | 10.7 MiB | 00m00s [512/664] Installing flexiblas-openblas 100% | 6.2 MiB/s | 44.1 KiB | 00m00s [513/664] Installing xml-common-0:0.6.3 100% | 39.6 MiB/s | 81.1 KiB | 00m00s [514/664] Installing fontconfig-0:2.15. 100% | 677.1 KiB/s | 811.1 KiB | 00m01s [515/664] Installing texlive-pdftex-11: 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Finish: build setup for python-pypet-0.6.1-7.fc41.src.rpm Start: rpmbuild python-pypet-0.6.1-7.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.hJ3ZNz + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + test -d /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/rm -rf /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.DVZP1L + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd /builddir/build/BUILD/python-pypet-0.6.1-build + rm -rf pypet-0.6.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pypet-0.6.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pypet-0.6.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/69.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/70.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/71.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/73.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + rm -rf pypet.egg-info + find . -type f -name .gitignore -print -delete ./.gitignore ./examples/.gitignore ./examples/example_17_wrapping_an_existing_project/.gitignore ./examples/example_24_large_scale_brian2_simulation/.gitignore ./pylint/.gitignore + mkdir -p _clean + cp -rp examples _clean/examples + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Bt4pdk + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) running egg_info creating pypet.egg-info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt writing manifest file 'pypet.egg-info/SOURCES.txt' reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-7.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 849.4 KiB/s | 29.7 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 141.9 KiB/s | 3.8 KiB | 00m00s updates 100% | 209.0 KiB/s | 22.4 KiB | 00m00s Copr repository 100% | 42.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "hdf5-1.12.1-20.fc41.x86_64" is already installed. Package "latexmk-4.86-1.fc41.noarch" is already installed. Package "make-1:4.4.1-8.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc41.noarch" is already installed. Package "python3-devel-3.13.1-2.fc41.x86_64" is already installed. Package "python3-sphinx-latex-1:7.3.7-2.fc41.noarch" is already installed. Package "python3-brian2-2.8.0-2.fc41.x86_64" is already installed. Package "python3-deap-1.4.1-7.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.4-1.fc41.x86_64" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-sphinx-1:7.3.7-2.fc41.noarch" is already installed. Package Arch Version Repository Size Installing: python3-pip noarch 24.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 11.4 MiB python3-wheel noarch 1:0.43.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 516.1 KiB Transaction Summary: Installing: 2 packages Total size of inbound packages is 3 MiB. Need to download 0 B. After this operation, 12 MiB extra will be used (install 12 MiB, remove 0 B). [1/1] python3-pip-0:24.2-1.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] python3-wheel-1:0.43.0-4.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [1/4] Verify package files 100% | 222.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 58.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.43.0 100% | 74.7 MiB/s | 535.1 KiB | 00m00s [4/4] Installing python3-pip-0:24.2-1.f 100% | 110.1 MiB/s | 11.7 MiB | 00m00s Warning: skipped OpenPGP checks for 2 packages from repository: http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.5h2vJ8 + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet-0.6.1.dist-info' Handling tables from hook generated metadata: Requires-Dist (pypet) Requirement not satisfied: tables Handling pandas from hook generated metadata: Requires-Dist (pypet) Requirement not satisfied: pandas Handling numpy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: scipy (installed: scipy 1.11.3) + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires + rm -rfv pypet-0.6.1.dist-info/ removed 'pypet-0.6.1.dist-info/top_level.txt' removed 'pypet-0.6.1.dist-info/METADATA' removed 'pypet-0.6.1.dist-info/LICENSE' removed directory 'pypet-0.6.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-7.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 174.1 KiB/s | 3.8 KiB | 00m00s fedora 100% | 106.5 KiB/s | 29.7 KiB | 00m00s updates 100% | 82.8 KiB/s | 22.4 KiB | 00m00s Copr repository 100% | 94.7 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "hdf5-1.12.1-20.fc41.x86_64" is already installed. Package "latexmk-4.86-1.fc41.noarch" is already installed. Package "make-1:4.4.1-8.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc41.noarch" is already installed. Package "python3-devel-3.13.1-2.fc41.x86_64" is already installed. Package "python3-sphinx-latex-1:7.3.7-2.fc41.noarch" is already installed. Package "python3-brian2-2.8.0-2.fc41.x86_64" is already installed. Package "python3-deap-1.4.1-7.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.4-1.fc41.x86_64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.x86_64" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pip-24.2-1.fc41.noarch" is already installed. Package "python3-scipy-1.11.3-16.fc41.x86_64" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-sphinx-1:7.3.7-2.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package Arch Version Repository Size Installing: python3-pandas x86_64 2.2.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 42.0 MiB python3-tables x86_64 3.10.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 10.2 MiB Installing dependencies: blosc x86_64 1.21.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 126.3 KiB blosc2 x86_64 2.15.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 552.2 KiB lzo x86_64 2.10-13.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 166.9 KiB python3-Bottleneck x86_64 1.3.7-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 627.3 KiB python3-blosc2 x86_64 2.5.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.0 MiB python3-cpuinfo noarch 9.0.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 309.7 KiB python3-msgpack x86_64 1.0.7-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 419.8 KiB python3-ndindex x86_64 1.7-13.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.9 MiB python3-numexpr x86_64 2.8.5-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 574.8 KiB python3-pytz noarch 2024.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 223.7 KiB python3-typing-extensions noarch 4.12.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 464.5 KiB snappy x86_64 1.2.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 71.1 KiB zlib-ng x86_64 2.1.7-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 153.4 KiB Transaction Summary: Installing: 15 packages Total size of inbound packages is 12 MiB. Need to download 3 MiB. After this operation, 60 MiB extra will be used (install 60 MiB, remove 0 B). [1/1] python3-pandas-0:2.2.1-7.fc41.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/8] python3-numexpr-0:2.8.5-7.fc41.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/10] python3-Bottleneck-0:1.3.7-7.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/11] python3-pytz-0:2024.2-1.fc41.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/12] python3-msgpack-0:1.0.7-5.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/15] blosc-0:1.21.6-1.fc41.x86_64 100% | 2.3 MiB/s | 58.9 KiB | 00m00s [ 6/15] blosc2-0:2.15.1-1.fc41.x86_64 100% | 5.9 MiB/s | 213.2 KiB | 00m00s [ 7/15] lzo-0:2.10-13.fc41.x86_64 100% | 6.4 MiB/s | 66.0 KiB | 00m00s [ 8/15] python3-tables-0:3.10.1-1.fc41. 100% | 41.5 MiB/s | 1.7 MiB | 00m00s [ 9/15] python3-cpuinfo-0:9.0.0-9.fc41. 100% | 11.2 MiB/s | 68.6 KiB | 00m00s [10/15] python3-typing-extensions-0:4.1 100% | 13.1 MiB/s | 93.8 KiB | 00m00s [11/15] python3-ndindex-0:1.7-13.fc41.x 100% | 90.8 MiB/s | 743.4 KiB | 00m00s [12/15] python3-blosc2-0:2.5.1-5.fc41.x 100% | 20.9 MiB/s | 341.7 KiB | 00m00s [13/15] zlib-ng-0:2.1.7-3.fc41.x86_64 100% | 13.8 MiB/s | 84.7 KiB | 00m00s [14/15] snappy-0:1.2.1-2.fc41.x86_64 100% | 7.7 MiB/s | 39.6 KiB | 00m00s -------------------------------------------------------------------------------- [15/15] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [ 1/17] Verify package files 100% | 375.0 B/s | 15.0 B | 00m00s [ 2/17] Prepare transaction 100% | 250.0 B/s | 15.0 B | 00m00s [ 3/17] Installing python3-numexpr-0:2. 100% | 142.3 MiB/s | 582.9 KiB | 00m00s [ 4/17] Installing python3-cpuinfo-0:9. 100% | 153.2 MiB/s | 313.8 KiB | 00m00s [ 5/17] Installing snappy-0:1.2.1-2.fc4 100% | 71.1 MiB/s | 72.8 KiB | 00m00s [ 6/17] Installing blosc-0:1.21.6-1.fc4 100% | 126.1 MiB/s | 129.1 KiB | 00m00s [ 7/17] Installing zlib-ng-0:2.1.7-3.fc 100% | 151.2 MiB/s | 154.8 KiB | 00m00s [ 8/17] Installing blosc2-0:2.15.1-1.fc 100% | 180.9 MiB/s | 555.6 KiB | 00m00s [ 9/17] Installing python3-ndindex-0:1. 100% | 225.7 MiB/s | 2.9 MiB | 00m00s [10/17] Installing python3-msgpack-0:1. 100% | 138.8 MiB/s | 426.3 KiB | 00m00s [11/17] Installing python3-blosc2-0:2.5 100% | 199.4 MiB/s | 1.0 MiB | 00m00s [12/17] Installing python3-pytz-0:2024. 100% | 111.8 MiB/s | 229.0 KiB | 00m00s [13/17] Installing python3-Bottleneck-0 100% | 106.1 MiB/s | 651.8 KiB | 00m00s [14/17] Installing python3-typing-exten 100% | 228.0 MiB/s | 466.9 KiB | 00m00s [15/17] Installing lzo-0:2.10-13.fc41.x 100% | 82.3 MiB/s | 168.5 KiB | 00m00s [16/17] Installing python3-tables-0:3.1 100% | 271.2 MiB/s | 10.3 MiB | 00m00s [17/17] Installing python3-pandas-0:2.2 100% | 222.1 MiB/s | 42.2 MiB | 00m00s Warning: skipped OpenPGP checks for 15 packages from repository: http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ztOb10 + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet-0.6.1.dist-info' Handling tables from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: tables (installed: tables 3.10.1) Handling pandas from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: pandas (installed: pandas 2.2.1) Handling numpy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: scipy (installed: scipy 1.11.3) + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires + rm -rfv pypet-0.6.1.dist-info/ removed 'pypet-0.6.1.dist-info/top_level.txt' removed 'pypet-0.6.1.dist-info/METADATA' removed 'pypet-0.6.1.dist-info/LICENSE' removed directory 'pypet-0.6.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-7.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 89.1 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 174.1 KiB/s | 3.8 KiB | 00m00s fedora 100% | 959.0 KiB/s | 29.7 KiB | 00m00s updates 100% | 344.1 KiB/s | 22.4 KiB | 00m00s Repositories loaded. Package "hdf5-1.12.1-20.fc41.x86_64" is already installed. Package "latexmk-4.86-1.fc41.noarch" is already installed. Package "make-1:4.4.1-8.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc41.noarch" is already installed. Package "python3-devel-3.13.1-2.fc41.x86_64" is already installed. Package "python3-sphinx-latex-1:7.3.7-2.fc41.noarch" is already installed. Package "python3-brian2-2.8.0-2.fc41.x86_64" is already installed. Package "python3-deap-1.4.1-7.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.4-1.fc41.x86_64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.x86_64" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.2-1.fc41.noarch" is already installed. Package "python3-scipy-1.11.3-16.fc41.x86_64" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-sphinx-1:7.3.7-2.fc41.noarch" is already installed. Package "python3-tables-3.10.1-1.fc41.x86_64" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.FPMeFS + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet-0.6.1.dist-info' Handling tables from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: tables (installed: tables 3.10.1) Handling pandas from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: pandas (installed: pandas 2.2.1) Handling numpy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: scipy (installed: scipy 1.11.3) + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-buildrequires + rm -rfv pypet-0.6.1.dist-info/ removed 'pypet-0.6.1.dist-info/top_level.txt' removed 'pypet-0.6.1.dist-info/METADATA' removed 'pypet-0.6.1.dist-info/LICENSE' removed directory 'pypet-0.6.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ltyZg3 + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pypet-0.6.1 + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir Processing /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info writing /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-nb96n8b4/pypet-0.6.1.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: pypet Building wheel for pypet (pyproject.toml): started Running command Building wheel for pypet (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/pypet copying pypet/__init__.py -> build/lib/pypet copying pypet/_version.py -> build/lib/pypet copying pypet/annotations.py -> build/lib/pypet copying pypet/environment.py -> build/lib/pypet copying pypet/naturalnaming.py -> build/lib/pypet copying pypet/parameter.py -> build/lib/pypet copying pypet/pypetconstants.py -> build/lib/pypet copying pypet/pypetexceptions.py -> build/lib/pypet copying pypet/pypetlogging.py -> build/lib/pypet copying pypet/shareddata.py -> build/lib/pypet copying pypet/slots.py -> build/lib/pypet copying pypet/storageservice.py -> build/lib/pypet copying pypet/trajectory.py -> build/lib/pypet creating build/lib/pypet/brian2 copying pypet/brian2/__init__.py -> build/lib/pypet/brian2 copying pypet/brian2/network.py -> build/lib/pypet/brian2 copying pypet/brian2/parameter.py -> build/lib/pypet/brian2 creating build/lib/pypet/utils copying pypet/utils/__init__.py -> build/lib/pypet/utils copying pypet/utils/comparisons.py -> build/lib/pypet/utils copying pypet/utils/configparsing.py -> build/lib/pypet/utils copying pypet/utils/decorators.py -> build/lib/pypet/utils copying pypet/utils/dynamicimports.py -> build/lib/pypet/utils copying pypet/utils/explore.py -> build/lib/pypet/utils copying pypet/utils/gitintegration.py -> build/lib/pypet/utils copying pypet/utils/hdf5compression.py -> build/lib/pypet/utils copying pypet/utils/helpful_classes.py -> build/lib/pypet/utils copying pypet/utils/helpful_functions.py -> build/lib/pypet/utils copying pypet/utils/mpwrappers.py -> build/lib/pypet/utils copying pypet/utils/pypettest.py -> build/lib/pypet/utils copying pypet/utils/siginthandling.py -> build/lib/pypet/utils copying pypet/utils/storagefactory.py -> build/lib/pypet/utils copying pypet/utils/trajectory_utils.py -> build/lib/pypet/utils creating build/lib/pypet/tests copying pypet/tests/__init__.py -> build/lib/pypet/tests copying pypet/tests/_atworema.py -> build/lib/pypet/tests copying pypet/tests/all_examples.py -> build/lib/pypet/tests copying pypet/tests/all_multi_core_tests.py -> build/lib/pypet/tests copying pypet/tests/all_single_core_tests.py -> build/lib/pypet/tests copying pypet/tests/all_tests.py -> build/lib/pypet/tests copying pypet/tests/coverage_run.py -> build/lib/pypet/tests copying pypet/tests/scoop_run.py -> build/lib/pypet/tests copying pypet/tests/test_all_nose.py -> build/lib/pypet/tests creating build/lib/pypet/tests/unittests copying pypet/tests/unittests/__init__.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/annotations_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/configparse_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/link_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/module_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/mpwrappers_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/parameter_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/pypetlogging_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/shared_data_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/storage_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/trajectory_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/utils_test.py -> build/lib/pypet/tests/unittests creating build/lib/pypet/tests/integration copying pypet/tests/integration/__init__.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/envSCOOPdebug.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/environment_multiproc_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/environment_scoop_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/environment_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/git_check.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/link_multiproc_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/link_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/logging_multiproc_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/logging_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/merge_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/pipeline_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/removal_and_continue_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/shared_data_test.py -> build/lib/pypet/tests/integration creating build/lib/pypet/tests/profiling copying pypet/tests/profiling/__init__.py -> build/lib/pypet/tests/profiling copying pypet/tests/profiling/creating_run_table.py -> build/lib/pypet/tests/profiling copying pypet/tests/profiling/profiling.py -> build/lib/pypet/tests/profiling creating build/lib/pypet/tests/testutils copying pypet/tests/testutils/__init__.py -> build/lib/pypet/tests/testutils copying pypet/tests/testutils/data.py -> build/lib/pypet/tests/testutils copying pypet/tests/testutils/ioutils.py -> build/lib/pypet/tests/testutils creating build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/__init__.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/brian2_monitor_test.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/brian2_parameter_test.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/module_test.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/run_a_brian2_network.py -> build/lib/pypet/tests/unittests/brian2tests creating build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/__init__.py -> build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/another_network_test.py -> build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/hdf5_brian2_test.py -> build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/network_test.py -> build/lib/pypet/tests/integration/brian2tests creating build/lib/pypet/logging copying pypet/logging/debug.ini -> build/lib/pypet/logging copying pypet/logging/default.ini -> build/lib/pypet/logging copying pypet/logging/env_config_test.ini -> build/lib/pypet/logging copying pypet/logging/test.ini -> build/lib/pypet/logging creating build/lib/pypet/tests/testdata copying pypet/tests/testdata/pypet_v0_1b_6.hdf5 -> build/lib/pypet/tests/testdata installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/__init__.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/_version.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/annotations.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/environment.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/naturalnaming.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/parameter.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/pypetconstants.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/pypetexceptions.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/pypetlogging.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/shareddata.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/slots.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/storageservice.py -> build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/trajectory.py -> build/bdist.linux-x86_64/wheel/pypet creating build/bdist.linux-x86_64/wheel/pypet/brian2 copying build/lib/pypet/brian2/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/brian2 copying build/lib/pypet/brian2/network.py -> build/bdist.linux-x86_64/wheel/pypet/brian2 copying build/lib/pypet/brian2/parameter.py -> build/bdist.linux-x86_64/wheel/pypet/brian2 creating build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/comparisons.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/configparsing.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/decorators.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/dynamicimports.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/explore.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/gitintegration.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/hdf5compression.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/helpful_classes.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/helpful_functions.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/mpwrappers.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/pypettest.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/siginthandling.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/storagefactory.py -> build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/trajectory_utils.py -> build/bdist.linux-x86_64/wheel/pypet/utils creating build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/_atworema.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/all_examples.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/all_multi_core_tests.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/all_single_core_tests.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/all_tests.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/coverage_run.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/scoop_run.py -> build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/test_all_nose.py -> build/bdist.linux-x86_64/wheel/pypet/tests creating build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/annotations_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/configparse_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/link_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/module_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/mpwrappers_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/parameter_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/pypetlogging_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/shared_data_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/storage_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/trajectory_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/utils_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests creating build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/brian2_monitor_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/brian2_parameter_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/module_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/run_a_brian2_network.py -> build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests creating build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/envSCOOPdebug.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/environment_multiproc_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/environment_scoop_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/environment_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/git_check.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/link_multiproc_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/link_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/logging_multiproc_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/logging_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/merge_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/pipeline_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/removal_and_continue_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/shared_data_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration creating build/bdist.linux-x86_64/wheel/pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/another_network_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/hdf5_brian2_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/network_test.py -> build/bdist.linux-x86_64/wheel/pypet/tests/integration/brian2tests creating build/bdist.linux-x86_64/wheel/pypet/tests/profiling copying build/lib/pypet/tests/profiling/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests/profiling copying build/lib/pypet/tests/profiling/creating_run_table.py -> build/bdist.linux-x86_64/wheel/pypet/tests/profiling copying build/lib/pypet/tests/profiling/profiling.py -> build/bdist.linux-x86_64/wheel/pypet/tests/profiling creating build/bdist.linux-x86_64/wheel/pypet/tests/testutils copying build/lib/pypet/tests/testutils/__init__.py -> build/bdist.linux-x86_64/wheel/pypet/tests/testutils copying build/lib/pypet/tests/testutils/data.py -> build/bdist.linux-x86_64/wheel/pypet/tests/testutils copying build/lib/pypet/tests/testutils/ioutils.py -> build/bdist.linux-x86_64/wheel/pypet/tests/testutils creating build/bdist.linux-x86_64/wheel/pypet/tests/testdata copying build/lib/pypet/tests/testdata/pypet_v0_1b_6.hdf5 -> build/bdist.linux-x86_64/wheel/pypet/tests/testdata creating build/bdist.linux-x86_64/wheel/pypet/logging copying build/lib/pypet/logging/debug.ini -> build/bdist.linux-x86_64/wheel/pypet/logging copying build/lib/pypet/logging/default.ini -> build/bdist.linux-x86_64/wheel/pypet/logging copying build/lib/pypet/logging/env_config_test.ini -> build/bdist.linux-x86_64/wheel/pypet/logging copying build/lib/pypet/logging/test.ini -> build/bdist.linux-x86_64/wheel/pypet/logging running install_egg_info running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' Copying pypet.egg-info to build/bdist.linux-x86_64/wheel/pypet-0.6.1-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/pypet-0.6.1.dist-info/WHEEL creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-wheel-g1fb9hy7/.tmp-i6nkfux0/pypet-0.6.1-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'pypet/__init__.py' adding 'pypet/_version.py' adding 'pypet/annotations.py' adding 'pypet/environment.py' adding 'pypet/naturalnaming.py' adding 'pypet/parameter.py' adding 'pypet/pypetconstants.py' adding 'pypet/pypetexceptions.py' adding 'pypet/pypetlogging.py' adding 'pypet/shareddata.py' adding 'pypet/slots.py' adding 'pypet/storageservice.py' adding 'pypet/trajectory.py' adding 'pypet/brian2/__init__.py' adding 'pypet/brian2/network.py' adding 'pypet/brian2/parameter.py' adding 'pypet/logging/debug.ini' adding 'pypet/logging/default.ini' adding 'pypet/logging/env_config_test.ini' adding 'pypet/logging/test.ini' adding 'pypet/tests/__init__.py' adding 'pypet/tests/_atworema.py' adding 'pypet/tests/all_examples.py' adding 'pypet/tests/all_multi_core_tests.py' adding 'pypet/tests/all_single_core_tests.py' adding 'pypet/tests/all_tests.py' adding 'pypet/tests/coverage_run.py' adding 'pypet/tests/scoop_run.py' adding 'pypet/tests/test_all_nose.py' adding 'pypet/tests/integration/__init__.py' adding 'pypet/tests/integration/envSCOOPdebug.py' adding 'pypet/tests/integration/environment_multiproc_test.py' adding 'pypet/tests/integration/environment_scoop_test.py' adding 'pypet/tests/integration/environment_test.py' adding 'pypet/tests/integration/git_check.py' adding 'pypet/tests/integration/link_multiproc_test.py' adding 'pypet/tests/integration/link_test.py' adding 'pypet/tests/integration/logging_multiproc_test.py' adding 'pypet/tests/integration/logging_test.py' adding 'pypet/tests/integration/merge_test.py' adding 'pypet/tests/integration/pipeline_test.py' adding 'pypet/tests/integration/removal_and_continue_test.py' adding 'pypet/tests/integration/shared_data_test.py' adding 'pypet/tests/integration/brian2tests/__init__.py' adding 'pypet/tests/integration/brian2tests/another_network_test.py' adding 'pypet/tests/integration/brian2tests/hdf5_brian2_test.py' adding 'pypet/tests/integration/brian2tests/network_test.py' adding 'pypet/tests/profiling/__init__.py' adding 'pypet/tests/profiling/creating_run_table.py' adding 'pypet/tests/profiling/profiling.py' adding 'pypet/tests/testdata/pypet_v0_1b_6.hdf5' adding 'pypet/tests/testutils/__init__.py' adding 'pypet/tests/testutils/data.py' adding 'pypet/tests/testutils/ioutils.py' adding 'pypet/tests/unittests/__init__.py' adding 'pypet/tests/unittests/annotations_test.py' adding 'pypet/tests/unittests/configparse_test.py' adding 'pypet/tests/unittests/link_test.py' adding 'pypet/tests/unittests/module_test.py' adding 'pypet/tests/unittests/mpwrappers_test.py' adding 'pypet/tests/unittests/parameter_test.py' adding 'pypet/tests/unittests/pypetlogging_test.py' adding 'pypet/tests/unittests/shared_data_test.py' adding 'pypet/tests/unittests/storage_test.py' adding 'pypet/tests/unittests/trajectory_test.py' adding 'pypet/tests/unittests/utils_test.py' adding 'pypet/tests/unittests/brian2tests/__init__.py' adding 'pypet/tests/unittests/brian2tests/brian2_monitor_test.py' adding 'pypet/tests/unittests/brian2tests/brian2_parameter_test.py' adding 'pypet/tests/unittests/brian2tests/module_test.py' adding 'pypet/tests/unittests/brian2tests/run_a_brian2_network.py' adding 'pypet/utils/__init__.py' adding 'pypet/utils/comparisons.py' adding 'pypet/utils/configparsing.py' adding 'pypet/utils/decorators.py' adding 'pypet/utils/dynamicimports.py' adding 'pypet/utils/explore.py' adding 'pypet/utils/gitintegration.py' adding 'pypet/utils/hdf5compression.py' adding 'pypet/utils/helpful_classes.py' adding 'pypet/utils/helpful_functions.py' adding 'pypet/utils/mpwrappers.py' adding 'pypet/utils/pypettest.py' adding 'pypet/utils/siginthandling.py' adding 'pypet/utils/storagefactory.py' adding 'pypet/utils/trajectory_utils.py' adding 'pypet-0.6.1.dist-info/LICENSE' adding 'pypet-0.6.1.dist-info/METADATA' adding 'pypet-0.6.1.dist-info/WHEEL' adding 'pypet-0.6.1.dist-info/top_level.txt' adding 'pypet-0.6.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for pypet (pyproject.toml): finished with status 'done' Created wheel for pypet: filename=pypet-0.6.1-py3-none-any.whl size=344991 sha256=ae3c09cc4810fa39fb982d5c8ee87f33f60a73d57357e4b3483aa04c51481c07 Stored in directory: /builddir/.cache/pip/wheels/86/b8/dd/a40118f5ac504c34af376e0fe5f13bf297c2bead9c1ed6d6bc Successfully built pypet + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C doc latex SPHINXOPTS=-j4 make: Entering directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc' sphinx-build -b latex -d build/doctrees -j4 source build/latex Running Sphinx v7.3.7 making output directory... done [autosummary] generating autosummary for: cookbook/brian.rst, cookbook/environment.rst, cookbook/parameter.rst, cookbook/trajectory.rst, examplesdoc/example_01.rst, examplesdoc/example_02.rst, examplesdoc/example_03.rst, examplesdoc/example_04.rst, examplesdoc/example_05.rst, examplesdoc/example_06.rst, ..., pypetdoc/brian2networkdoc.rst, pypetdoc/brian2parameterdoc.rst, pypetdoc/environmentdoc.rst, pypetdoc/parameterdoc.rst, pypetdoc/pypetconstantsdoc.rst, pypetdoc/pypetexceptionsdoc.rst, pypetdoc/slotsloggingdoc.rst, pypetdoc/storageservicedoc.rst, pypetdoc/trajectorydoc.rst, pypetdoc/utilsdoc.rst building [mo]: targets for 0 po files that are out of date writing output... building [latex]: all documents updating environment: [new config] 51 added, 0 changed, 0 removed reading sources... [ 20%] cookbook/brian .. examplesdoc/example_08 reading sources... [ 40%] examplesdoc/example_09 .. examplesdoc/example_20 reading sources... [ 60%] examplesdoc/example_21 .. manual/examples_toc reading sources... [ 80%] manual/faqs .. pypetdoc/environmentdoc reading sources... [100%] pypetdoc/parameterdoc .. pypetdoc/utilsdoc looking for now-outdated files... none found pickling environment... done checking consistency... done copying TeX support files... processing pypet.tex... latex manual/manual_toc manual/introduction manual/tutorial manual/cookbook_toc cookbook/trajectory cookbook/parameter cookbook/environment cookbook/brian manual/examples_toc examplesdoc/example_01 examplesdoc/example_02 examplesdoc/example_14 examplesdoc/example_15 examplesdoc/example_04 examplesdoc/example_21 examplesdoc/example_09 examplesdoc/example_13 examplesdoc/example_17 examplesdoc/example_18 examplesdoc/example_03 examplesdoc/example_05 examplesdoc/example_06 examplesdoc/example_08 examplesdoc/example_10 examplesdoc/example_12 examplesdoc/example_16 examplesdoc/example_19 examplesdoc/example_20 examplesdoc/example_22 examplesdoc/example_23 examplesdoc/example_24 manual/optimization_tips manual/faqs manual/misc_toc manual/misc manual/changelog manual/code_toc pypetdoc/environmentdoc pypetdoc/trajectorydoc pypetdoc/parameterdoc pypetdoc/annotationsdoc pypetdoc/utilsdoc pypetdoc/pypetexceptionsdoc pypetdoc/pypetconstantsdoc pypetdoc/slotsloggingdoc pypetdoc/storageservicedoc pypetdoc/brian2parameterdoc pypetdoc/brian2networkdoc latex_contact_license resolving references... done writing... done copying images... [ 12%] figures/layout.png copying images... [ 25%] figures/example_01.png copying images... [ 38%] figures/experiment_phases.png copying images... [ 50%] figures/tutorial.png copying images... [ 62%] figures/network_managing.png copying images... [ 75%] figures/main_script.png copying images... [ 88%] figures/network_run.png copying images... [100%] bbd_2013_poster/meyer_bbd_2013_small.png build succeeded, 2 warnings. The LaTeX files are in build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). Build finished; the LaTeX files are in build/latex. Run `make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). make: Leaving directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc' WARNING: html_static_path entry '_static' does not exist /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/source/latex.rst: WARNING: document isn't included in any toctree + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C doc/build/latex LATEXMKOPTS=-quiet make: Entering directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/build/latex' latexmk -pdf -dvi- -ps- -quiet 'pypet.tex' Rc files read: /etc/latexmkrc latexmkrc Latexmk: Run number 1 of rule 'pdflatex' This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode Latexmk: Getting log file 'pypet.log' Have index file 'pypet.idx', pypet.ind pypet Latexmk: Run number 1 of rule 'makeindex pypet.idx' Latexmk: Run number 2 of rule 'pdflatex' This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode Latexmk: Getting log file 'pypet.log' Have index file 'pypet.idx', pypet.ind pypet Latexmk: Run number 3 of rule 'pdflatex' This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode Latexmk: Getting log file 'pypet.log' Have index file 'pypet.idx', pypet.ind pypet make: Leaving directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/build/latex' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zTusJg + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + '[' /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build + mkdir /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pypet-0.6.1 ++ ls /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir/pypet-0.6.1-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=pypet==0.6.1 + '[' -z pypet==0.6.1 ']' + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir pypet==0.6.1 Using pip 24.2 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir Processing ./pyproject-wheeldir/pypet-0.6.1-py3-none-any.whl Installing collected packages: pypet Successfully installed pypet-0.6.1 + '[' -d /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT --record /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/RECORD --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/RECORD removed '/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/REQUESTED removed '/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-record --prefix /usr -l pypet + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/brian2/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/brian2/__pycache__/network.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/brian2/__pycache__/parameter.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/__pycache__/all_examples.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/__pycache__/all_multi_core_tests.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/__pycache__/all_single_core_tests.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/unittests/__pycache__/parameter_test.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/__pycache__/all_tests.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/pypetexceptions.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/environment.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/slots.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/pypetlogging.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/shareddata.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/trajectory.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/storageservice.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/naturalnaming.cpython-313.pyc: rewriting with normalized contents Scanned 28 directories and 253 files, processed 86 inodes, 86 modified (10 replaced + 76 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-pypet-0.6.1-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.w0H7me + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pypet-0.6.1 + '[' '!' -f /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-7.fc41.x86_64-pyproject-modules -e '*tests*' Check import: pypet Check import: pypet.annotations Check import: pypet.brian2 Check import: pypet.brian2.network Check import: pypet.brian2.parameter Check import: pypet.environment Check import: pypet.naturalnaming Check import: pypet.parameter Check import: pypet.pypetconstants Check import: pypet.pypetexceptions Check import: pypet.pypetlogging Check import: pypet.shareddata Check import: pypet.slots Check import: pypet.storageservice Check import: pypet.trajectory Check import: pypet.utils Check import: pypet.utils.comparisons Check import: pypet.utils.configparsing Check import: pypet.utils.decorators Check import: pypet.utils.dynamicimports Check import: pypet.utils.explore Check import: pypet.utils.gitintegration Check import: pypet.utils.hdf5compression Check import: pypet.utils.helpful_classes Check import: pypet.utils.helpful_functions Check import: pypet.utils.mpwrappers Check import: pypet.utils.pypettest Check import: pypet.utils.siginthandling Check import: pypet.utils.storagefactory Check import: pypet.utils.trajectory_utils + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 pypet/tests/all_tests.py test_annotations_insert (unittests.annotations_test.AnnotationsTest.test_annotations_insert) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_attribute_deletion (unittests.annotations_test.AnnotationsTest.test_attribute_deletion) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_f_get_errors (unittests.annotations_test.AnnotationsTest.test_f_get_errors) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.ggg` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_f_set_numbering (unittests.annotations_test.AnnotationsTest.test_f_set_numbering) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_get_annotations (unittests.annotations_test.AnnotationsTest.test_get_annotations) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_get_item (unittests.annotations_test.AnnotationsTest.test_get_item) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_get_item_no_copy (unittests.annotations_test.AnnotationsTest.test_get_item_no_copy) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_item_deletion (unittests.annotations_test.AnnotationsTest.test_item_deletion) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_pickling (unittests.annotations_test.AnnotationsTest.test_pickling) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_single_get_and_getattr_and_setattr (unittests.annotations_test.AnnotationsTest.test_single_get_and_getattr_and_setattr) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.test2` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_storage_and_loading (unittests.annotations_test.AnnotationsTest.test_storage_and_loading) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Opening HDF5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5` in mode `a` with trajectory `Annotations` INFO:pypet.storageservice.HDF5StorageService:Start storing Trajectory `Annotations`. INFO:pypet.storageservice.HDF5StorageService:Storing branch `config`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.pandas_format`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.shuffle`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.fletcher32`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.encoding`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.complib`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.complevel`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.derived_parameters_per_run`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.results_per_run`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.purge_duplicate_comments`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.results_summary`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.derived_parameters_summary`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.explored_parameters_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.results_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.derived_parameters_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.parameters_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.config_overview`. INFO:pypet.storageservice.HDF5StorageService:Storing branch `results`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `results.testres`. INFO:pypet.storageservice.HDF5StorageService:Storing branch `parameters`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `parameters.testgroup.testparam`. INFO:pypet.storageservice.HDF5StorageService:Finished storing Trajectory `Annotations`. DEBUG:pypet.storageservice.HDF5StorageService:Closing HDF5 file DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Opening HDF5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5` in mode `r` with trajectory `Annotations` INFO:pypet.storageservice.HDF5StorageService:Loading trajectory `Annotations`. INFO:pypet.storageservice.HDF5StorageService:Loading branch `config` in mode `2`. INFO:pypet.storageservice.HDF5StorageService:Loading branch `parameters` in mode `2`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Loading data of parameters.testgroup.testparam INFO:pypet.storageservice.HDF5StorageService:Loading branch `results` in mode `2`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Loading data of results.testres DEBUG:pypet.storageservice.HDF5StorageService:Closing HDF5 file Level 21:root:REMOVING ALL TEMPORARY DATA ok test_to_str (unittests.annotations_test.AnnotationsTest.test_to_str) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.parameter_test.ArrayParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.parameter_test.ArrayParameterTest.test_equal_values) ... ok test_expanding (unittests.parameter_test.ArrayParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.parameter_test.ArrayParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.parameter_test.ArrayParameterTest.test_exploration) ... ok test_get_data (unittests.parameter_test.ArrayParameterTest.test_get_data) ... ok test_get_item (unittests.parameter_test.ArrayParameterTest.test_get_item) ... ok test_meta_settings (unittests.parameter_test.ArrayParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.parameter_test.ArrayParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.parameter_test.ArrayParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.parameter_test.ArrayParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.parameter_test.ArrayParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.parameter_test.ArrayParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.parameter_test.ArrayParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.parameter_test.ArrayParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.parameter_test.ArrayParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.ArrayParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.parameter_test.ArrayParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.ArrayParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.parameter_test.ArrayParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.parameter_test.ArrayParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.parameter_test.ArrayParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.parameter_test.ArrayParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.parameter_test.ArrayParameterTest.test_values_of_same_type) ... ok test_with_pre_run (integration.brian2tests.network_test.Brain2NetworkTest.test_with_pre_run) ... SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Starting simulation at t=100. ms for a duration of 300. ms Starting simulation at t=100. ms for a duration of 300. ms 300. ms (100%) simulated in < 1s 300. ms (100%) simulated in < 1s ok test_with_pre_run_single_core (integration.brian2tests.network_test.Brain2NetworkTest.test_with_pre_run_single_core) ... Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Starting simulation at t=100. ms for a duration of 300. ms 300. ms (100%) simulated in < 1s Starting simulation at t=100. ms for a duration of 300. ms 300. ms (100%) simulated in < 1s ok test_without_pre_run (integration.brian2tests.network_test.Brain2NetworkTest.test_without_pre_run) ... Starting simulation at t=0. s for a duration of 300. ms Starting simulation at t=0. s for a duration of 300. ms 300. ms (100%) simulated in < 1s 300. ms (100%) simulated in < 1s ok test_net (integration.brian2tests.another_network_test.Brian2FullNetworkTest.test_net) ... Starting simulation at t=0. s for a duration of 250. ms 250. ms (100%) simulated in < 1s Starting simulation at t=0. s for a duration of 250. ms 250. ms (100%) simulated in < 1s Starting simulation at t=0. s for a duration of 250. ms 250. ms (100%) simulated in < 1s ok test_get_unit_fast (unittests.brian2tests.brian2_parameter_test.Brian2GetUnitFastTest.test_get_unit_fast) ... ok Starting simulation at t=0. s for a duration of 10. ms 10. ms (100%) simulated in < 1s test_Attribute_error_for_get_item (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_contains) ... ok test_deletion (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_dir) ... ok test_emptying (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_emptying) ... ok test_f_get_errors (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_f_to_dict_no_copy) ... ok test_failing_adding_another_monitor (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_failing_adding_another_monitor) ... ok test_get_data (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_get_data) ... ok test_get_item (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_get_item) ... ok test_getattr_and_setattr (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_getattr_and_setattr) ... ok test_iter (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_iter) ... ok test_meta_settings (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_meta_settings) ... ok test_natural_naming (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_natural_naming) ... ok test_pickling (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_reject_outer_data_structure) ... ok test_rename (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_rename) ... ok test_set_item_via_number (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_set_item_via_number) ... ok test_set_numbering (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_set_numbering) ... ok test_storage_and_loading (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_warning) ... ok test_expanding (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_expanding) ... ok test_exploration (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_exploration) ... ok test_loading_and_expanding (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_loading_and_expanding) ... ok test_meta_settings (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_meta_settings) ... ok test_storage_and_loading (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_storage_and_loading) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_equal_values) ... ok test_expanding (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_exploration) ... ok test_false_on_values_not_of_same_type (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_false_on_values_not_of_same_type) ... ok test_get_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_get_data) ... ok test_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_get_item) ... ok test_meta_settings (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_store_load_with_hdf5_no_data) ... ok test_supports (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_supports) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_values_of_same_type) ... ok test_Attribute_error_for_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_contains) ... ok test_deletion (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_dir) ... ok test_emptying (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_emptying) ... ok test_f_get_errors (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_f_to_dict_no_copy) ... ok test_get_data (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_get_data) ... ok test_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_get_item) ... ok test_getattr_and_setattr (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_getattr_and_setattr) ... ok test_illegal_naming (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_illegal_naming) ... ok test_iter (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_iter) ... ok test_meta_settings (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_meta_settings) ... ok test_natural_naming (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_natural_naming) ... ok test_pickling (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_reject_outer_data_structure) ... ok test_rename (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_rename) ... ok test_set_item_via_number (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_set_item_via_number) ... ok test_set_numbering (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_set_numbering) ... ok test_storage_and_loading (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_warning) ... ok test_hdf5_store_load_monitorresult (integration.brian2tests.hdf5_brian2_test.Brian2hdf5Test.test_hdf5_store_load_monitorresult) ... ok test_hdf5_store_load_parameter (integration.brian2tests.hdf5_brian2_test.Brian2hdf5Test.test_hdf5_store_load_parameter) ... ok test_hdf5_store_load_result (integration.brian2tests.hdf5_brian2_test.Brian2hdf5Test.test_hdf5_store_load_result) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.CapTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if psutil is installed' test_a_large_run (integration.environment_multiproc_test.CapTest.test_a_large_run) ... skipped 'Only makes sense if psutil is installed' test_errors (integration.environment_multiproc_test.CapTest.test_errors) ... skipped 'Only makes sense if psutil is installed' test_expand (integration.environment_multiproc_test.CapTest.test_expand) ... skipped 'Only makes sense if psutil is installed' test_expand_after_reload (integration.environment_multiproc_test.CapTest.test_expand_after_reload) ... skipped 'Only makes sense if psutil is installed' test_file_overwriting (integration.environment_multiproc_test.CapTest.test_file_overwriting) ... skipped 'Only makes sense if psutil is installed' test_just_one_run (integration.environment_multiproc_test.CapTest.test_just_one_run) ... skipped 'Only makes sense if psutil is installed' test_niceness (integration.environment_multiproc_test.CapTest.test_niceness) ... skipped 'Only makes sense if psutil is installed' test_purge_duplicate_comments (integration.environment_multiproc_test.CapTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if psutil is installed' test_run (integration.environment_multiproc_test.CapTest.test_run) ... skipped 'Only makes sense if psutil is installed' test_run_complex (integration.environment_multiproc_test.CapTest.test_run_complex) ... skipped 'Only makes sense if psutil is installed' test_store_form_tuple (integration.environment_multiproc_test.CapTest.test_store_form_tuple) ... skipped 'Only makes sense if psutil is installed' test_store_single_group (integration.environment_multiproc_test.CapTest.test_store_single_group) ... skipped 'Only makes sense if psutil is installed' test_switch_ON_large_tables (integration.environment_multiproc_test.CapTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if psutil is installed' test_switch_off_all_tables (integration.environment_multiproc_test.CapTest.test_switch_off_all_tables) ... skipped 'Only makes sense if psutil is installed' test_switch_on_all_comments (integration.environment_multiproc_test.CapTest.test_switch_on_all_comments) ... skipped 'Only makes sense if psutil is installed' test_time_display_of_loading (integration.environment_multiproc_test.CapTest.test_time_display_of_loading) ... skipped 'Only makes sense if psutil is installed' test_two_runs (integration.environment_multiproc_test.CapTest.test_two_runs) ... skipped 'Only makes sense if psutil is installed' test_cartesian_product (unittests.utils_test.CartesianTest.test_cartesian_product) ... ok test_cartesian_product_combined_params (unittests.utils_test.CartesianTest.test_cartesian_product_combined_params) ... ok test_parsing (unittests.configparse_test.ConfigParseTest.test_parsing) ... MainProcess STDOUT CRITICAL Established redirection of `stdout`. ok test_continueing (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing) ... skipped 'Only makes sense if dill is installed' test_continueing_mp (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing_mp) ... skipped 'Only makes sense if dill is installed' test_continueing_mp_custom (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing_mp_custom) ... skipped 'Only makes sense if dill is installed' test_continueing_remove_completed (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing_remove_completed) ... skipped 'Only makes sense if dill is installed' test_multiple_storage_and_loading (integration.removal_and_continue_test.ContinueMPPoolTest.test_multiple_storage_and_loading) ... skipped 'Only makes sense if dill is installed' test_removal (integration.removal_and_continue_test.ContinueMPPoolTest.test_removal) ... skipped 'Only makes sense if dill is installed' test_continueing (integration.removal_and_continue_test.ContinueMPTest.test_continueing) ... skipped 'Only makes sense if dill is installed' test_continueing_mp (integration.removal_and_continue_test.ContinueMPTest.test_continueing_mp) ... skipped 'Only makes sense if dill is installed' test_continueing_mp_custom (integration.removal_and_continue_test.ContinueMPTest.test_continueing_mp_custom) ... skipped 'Only makes sense if dill is installed' test_continueing_remove_completed (integration.removal_and_continue_test.ContinueMPTest.test_continueing_remove_completed) ... skipped 'Only makes sense if dill is installed' test_multiple_storage_and_loading (integration.removal_and_continue_test.ContinueMPTest.test_multiple_storage_and_loading) ... skipped 'Only makes sense if dill is installed' test_removal (integration.removal_and_continue_test.ContinueMPTest.test_removal) ... skipped 'Only makes sense if dill is installed' test_continueing (integration.removal_and_continue_test.ContinueTest.test_continueing) ... skipped 'Only makes sense if dill is installed' test_continueing_remove_completed (integration.removal_and_continue_test.ContinueTest.test_continueing_remove_completed) ... skipped 'Only makes sense if dill is installed' test_multiple_storage_and_loading (integration.removal_and_continue_test.ContinueTest.test_multiple_storage_and_loading) ... skipped 'Only makes sense if dill is installed' test_removal (integration.removal_and_continue_test.ContinueTest.test_removal) ... skipped 'Only makes sense if dill is installed' test_NOT_purge_duplicate_comments (pypet.tests.integration.environment_test.EnvironmentTest.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (pypet.tests.integration.environment_test.EnvironmentTest.test_a_large_run) ... ok test_errors (pypet.tests.integration.environment_test.EnvironmentTest.test_errors) ... ok test_expand (pypet.tests.integration.environment_test.EnvironmentTest.test_expand) ... ok test_expand_after_reload (pypet.tests.integration.environment_test.EnvironmentTest.test_expand_after_reload) ... ok test_file_overwriting (pypet.tests.integration.environment_test.EnvironmentTest.test_file_overwriting) ... ok test_just_one_run (pypet.tests.integration.environment_test.EnvironmentTest.test_just_one_run) ... ok test_niceness (pypet.tests.integration.environment_test.EnvironmentTest.test_niceness) ... ok test_purge_duplicate_comments (pypet.tests.integration.environment_test.EnvironmentTest.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:11:51,089 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__88936_2025_01_08_14h11m51s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (pypet.tests.integration.environment_test.EnvironmentTest.test_run) ... ok test_run_complex (pypet.tests.integration.environment_test.EnvironmentTest.test_run_complex) ... ok test_store_form_tuple (pypet.tests.integration.environment_test.EnvironmentTest.test_store_form_tuple) ... ok test_store_single_group (pypet.tests.integration.environment_test.EnvironmentTest.test_store_single_group) ... MainProcess 2025-01-08 14:11:56,205 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (pypet.tests.integration.environment_test.EnvironmentTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (pypet.tests.integration.environment_test.EnvironmentTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (pypet.tests.integration.environment_test.EnvironmentTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (pypet.tests.integration.environment_test.EnvironmentTest.test_time_display_of_loading) ... ok test_two_runs (pypet.tests.integration.environment_test.EnvironmentTest.test_two_runs) ... ok test_full_store (integration.environment_test.FullStorageTest.test_full_store) ... ok test_run (pypet.tests.integration.link_test.LinkEnvironmentTest.test_run) ... ok test_merge_with_linked_derived_parameter (integration.link_test.LinkMergeTest.test_merge_with_linked_derived_parameter) ... ok test_remerging (integration.link_test.LinkMergeTest.test_remerging) ... ok test_find_in_all_runs_with_links (unittests.link_test.LinkTrajectoryTests.test_find_in_all_runs_with_links) ... ok test_get_all_not_links (unittests.link_test.LinkTrajectoryTests.test_get_all_not_links) ... ok test_iteration_failure (unittests.link_test.LinkTrajectoryTests.test_iteration_failure) ... ok test_link_creation (unittests.link_test.LinkTrajectoryTests.test_link_creation) ... Failed adding `test` under `parameters`. Failed adding `circle1` under ``. ok test_link_deletion (unittests.link_test.LinkTrajectoryTests.test_link_deletion) ... ok test_link_of_link (unittests.link_test.LinkTrajectoryTests.test_link_of_link) ... ok test_link_removal (unittests.link_test.LinkTrajectoryTests.test_link_removal) ... ok test_links_according_to_run (unittests.link_test.LinkTrajectoryTests.test_links_according_to_run) ... ok test_not_getting_links (unittests.link_test.LinkTrajectoryTests.test_not_getting_links) ... ok test_storage_and_loading (unittests.link_test.LinkTrajectoryTests.test_storage_and_loading) ... ok test_pickling (unittests.pypetlogging_test.LoggingManagerTest.test_pickling) ... ok test_disable (pypet.tests.integration.logging_test.LoggingTest.test_disable) ... WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter ok test_file_renaming (pypet.tests.integration.logging_test.LoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (pypet.tests.integration.logging_test.LoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (pypet.tests.integration.logging_test.LoggingTest.test_logfile_creation_with_errors) ... MainProcess 2025-01-08 14:12:12,501 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,501 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,504 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:12,508 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,508 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,510 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:12,514 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,514 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,517 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:12,521 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,521 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,523 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:12,528 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,528 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,530 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:12,535 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,535 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,537 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:12,541 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:12,541 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:12,544 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logfile_old_way_creation_with_errors (pypet.tests.integration.logging_test.LoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logfile_old_way_disabling_mp_log (pypet.tests.integration.logging_test.LoggingTest.test_logfile_old_way_disabling_mp_log) ... MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_show_progress (pypet.tests.integration.logging_test.LoggingTest.test_logging_show_progress) ... MainProcess 2025-01-08 14:12:13,283 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% MainProcess 2025-01-08 14:12:13,284 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,284 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,286 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,290 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,290 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,290 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,293 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,297 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,297 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,297 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,299 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,303 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,303 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,303 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,305 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,309 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,310 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,310 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,312 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,316 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,316 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,316 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,319 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,323 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,323 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,323 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,325 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,329 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_show_progress_print (pypet.tests.integration.logging_test.LoggingTest.test_logging_show_progress_print) ... MainProcess 2025-01-08 14:12:13,533 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:12:13,549 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% MainProcess 2025-01-08 14:12:13,550 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,550 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,552 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,556 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,557 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,557 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,559 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,563 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,564 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,564 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,566 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,570 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,570 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,570 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,573 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,577 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,577 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,577 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,579 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,584 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,584 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,584 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,586 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,591 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 MainProcess 2025-01-08 14:12:13,591 pypet.ERROR ERROR ERROR_Test! MainProcess 2025-01-08 14:12:13,591 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:12:13,593 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:13,598 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_stdout (pypet.tests.integration.logging_test.LoggingTest.test_logging_stdout) ... MainProcess 2025-01-08 14:12:13,805 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:12:13,824 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2025-01-08 14:12:13,827 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:12:14,275 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (pypet.tests.integration.logging_test.LoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_init_method (unittests.utils_test.MatchingkwargsTest.test_init_method) ... ok test_kwargs (unittests.utils_test.MatchingkwargsTest.test_kwargs) ... ok test_more_than_def (unittests.utils_test.MatchingkwargsTest.test_more_than_def) ... ok test_more_than_def_args (unittests.utils_test.MatchingkwargsTest.test_more_than_def_args) ... ok test_no_match_no_init (unittests.utils_test.MatchingkwargsTest.test_no_match_no_init) ... ok test_basic_within_same_file_and_skipping_duplicates_which_leads_to_one_reamianing (integration.merge_test.MergeTest.test_basic_within_same_file_and_skipping_duplicates_which_leads_to_one_reamianing) ... ok test_basic_within_same_file_and_skipping_duplicates_which_will_be_all (integration.merge_test.MergeTest.test_basic_within_same_file_and_skipping_duplicates_which_will_be_all) ... ok test_basic_within_separate_file_and_skipping_duplicates_which_leads_to_one_reamianing (integration.merge_test.MergeTest.test_basic_within_separate_file_and_skipping_duplicates_which_leads_to_one_reamianing) ... ok test_merge_basic_with_separate_files_only_adding_more_trials (integration.merge_test.MergeTest.test_merge_basic_with_separate_files_only_adding_more_trials) ... ok test_merge_basic_with_separate_files_only_adding_more_trials_slow_merge (integration.merge_test.MergeTest.test_merge_basic_with_separate_files_only_adding_more_trials_slow_merge) ... ok test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes) ... ok test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes_test_backup (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes_test_backup) ... ok test_merge_basic_within_same_file_only_adding_more_trials_delete_other_trajectory (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_delete_other_trajectory) ... ok test_merge_basic_within_same_file_only_adding_more_trials_move_nodes (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_move_nodes) ... ok test_merging_errors_if_trajs_do_not_match (integration.merge_test.MergeTest.test_merging_errors_if_trajs_do_not_match) ... ok test_merging_trajectories_in_different_subspace (integration.merge_test.MergeTest.test_merging_trajectories_in_different_subspace) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_NOT_purge_duplicate_comments) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_a_large_run (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:13:52,883 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__45067_2025_01_08_14h13m52s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_store_single_group) ... MainProcess 2025-01-08 14:13:59,694 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_two_runs) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:14:25,259 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__76633_2025_01_08_14h14m25s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_store_single_group) ... MainProcess 2025-01-08 14:14:31,436 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_two_runs) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:14:59,501 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__27884_2025_01_08_14h14m59s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_store_single_group) ... MainProcess 2025-01-08 14:15:07,520 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_two_runs) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:15:27,592 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__52693` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:15:33,785 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__2442` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:15:40,068 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__36020` did NOT complete: `run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_full_copy_is_old_value (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_full_copy_is_old_value) ... ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_results_are_sorted_correctly_using_map) ... ok test_NOT_purge_duplicate_comments (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_a_large_run (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_a_large_run) ... skipped 'Only makes sense if scoop is installed' test_errors (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_errors) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_file_overwriting (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_file_overwriting) ... skipped 'Only makes sense if scoop is installed' test_just_one_run (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_just_one_run) ... skipped 'Only makes sense if scoop is installed' test_niceness (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_niceness) ... skipped 'Only makes sense if scoop is installed' test_purge_duplicate_comments (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_run (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_run) ... skipped 'Only makes sense if scoop is installed' test_run_complex (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_run_complex) ... skipped 'Only makes sense if scoop is installed' test_store_form_tuple (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_store_form_tuple) ... skipped 'Only makes sense if scoop is installed' test_store_single_group (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_store_single_group) ... skipped 'Only makes sense if scoop is installed' test_switch_ON_large_tables (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_off_all_tables (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_switch_off_all_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_on_all_comments (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_switch_on_all_comments) ... skipped 'Only makes sense if scoop is installed' test_time_display_of_loading (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_time_display_of_loading) ... skipped 'Only makes sense if scoop is installed' test_two_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_two_runs) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_f_iter_runs) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs_auto_load (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_f_iter_runs_auto_load) ... skipped 'Only makes sense if scoop is installed' test_graceful_exit (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_graceful_exit) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_if_results_are_sorted_correctly) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_manual_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_if_results_are_sorted_correctly_manual_runs) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_using_map (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_if_results_are_sorted_correctly_using_map) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_f_iter_runs) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs_auto_load (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_f_iter_runs_auto_load) ... skipped 'Only makes sense if scoop is installed' test_graceful_exit (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_graceful_exit) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_if_results_are_sorted_correctly) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_manual_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_if_results_are_sorted_correctly_manual_runs) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_using_map (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_if_results_are_sorted_correctly_using_map) ... skipped 'Only makes sense if scoop is installed' test_run (integration.link_multiproc_test.MultiprocLinkLocalTest.test_run) ... ok test_run (integration.link_multiproc_test.MultiprocLinkLockTest.test_run) ... Disabled redirection of `stdout`. ok test_run (integration.link_multiproc_test.MultiprocLinkNoPoolLockTest.test_run) ... ok test_run (integration.link_multiproc_test.MultiprocLinkNoPoolQueueTest.test_run) ... ok test_run (integration.link_multiproc_test.MultiprocLinkQueueTest.test_run) ... ok test_disable (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_disable) ... Disabled redirection of `stdout`. WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_creation_with_errors) ... Process-383 2025-01-08 14:15:46,960 pypet.ERROR ERROR ERROR_Test! Process-383 2025-01-08 14:15:46,960 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-383 2025-01-08 14:15:46,968 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-384 2025-01-08 14:15:46,970 pypet.ERROR ERROR ERROR_Test! Process-384 2025-01-08 14:15:46,970 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-385 2025-01-08 14:15:46,981 pypet.ERROR ERROR ERROR_Test! Process-385 2025-01-08 14:15:46,981 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-384 2025-01-08 14:15:46,987 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-386 2025-01-08 14:15:46,991 pypet.ERROR ERROR ERROR_Test! Process-386 2025-01-08 14:15:46,991 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-385 2025-01-08 14:15:47,006 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-387 2025-01-08 14:15:47,010 pypet.ERROR ERROR ERROR_Test! Process-387 2025-01-08 14:15:47,011 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-386 2025-01-08 14:15:47,027 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-388 2025-01-08 14:15:47,031 pypet.ERROR ERROR ERROR_Test! Process-388 2025-01-08 14:15:47,031 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-387 2025-01-08 14:15:47,046 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-389 2025-01-08 14:15:47,051 pypet.ERROR ERROR ERROR_Test! Process-389 2025-01-08 14:15:47,051 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-388 2025-01-08 14:15:47,065 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-389 2025-01-08 14:15:47,084 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:47,346 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_old_way_disabling_mp_log) ... Process-397 pypet.ERROR ERROR ERROR_Test! Process-397 pypet.ERROR ERROR ERROR_Test! Process-397 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-397 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-397 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-397 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-398 pypet.ERROR ERROR ERROR_Test! Process-398 pypet.ERROR ERROR ERROR_Test! Process-398 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-398 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-399 pypet.ERROR ERROR ERROR_Test! Process-399 pypet.ERROR ERROR ERROR_Test! Process-399 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-399 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-398 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-398 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-400 pypet.ERROR ERROR ERROR_Test! Process-400 pypet.ERROR ERROR ERROR_Test! Process-400 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-400 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-401 pypet.ERROR ERROR ERROR_Test! Process-401 pypet.ERROR ERROR ERROR_Test! Process-401 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-401 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-399 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-399 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-402 pypet.ERROR ERROR ERROR_Test! Process-402 pypet.ERROR ERROR ERROR_Test! Process-402 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-402 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-400 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-400 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-403 pypet.ERROR ERROR ERROR_Test! Process-403 pypet.ERROR ERROR ERROR_Test! Process-403 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-403 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-401 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-401 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-402 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-402 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-403 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-403 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logging_show_progress) ... MainProcess 2025-01-08 14:15:48,307 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% Process-404 2025-01-08 14:15:48,323 pypet.ERROR ERROR ERROR_Test! Process-404 2025-01-08 14:15:48,323 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-404 2025-01-08 14:15:48,331 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-405 2025-01-08 14:15:48,333 pypet.ERROR ERROR ERROR_Test! Process-405 2025-01-08 14:15:48,333 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-406 2025-01-08 14:15:48,345 pypet.ERROR ERROR ERROR_Test! Process-406 2025-01-08 14:15:48,345 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,347 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 Process-405 2025-01-08 14:15:48,351 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-407 2025-01-08 14:15:48,356 pypet.ERROR ERROR ERROR_Test! Process-407 2025-01-08 14:15:48,356 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,367 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-406 2025-01-08 14:15:48,371 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-408 2025-01-08 14:15:48,376 pypet.ERROR ERROR ERROR_Test! Process-408 2025-01-08 14:15:48,377 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,388 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 Process-407 2025-01-08 14:15:48,392 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-409 2025-01-08 14:15:48,398 pypet.ERROR ERROR ERROR_Test! Process-409 2025-01-08 14:15:48,398 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,408 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-408 2025-01-08 14:15:48,412 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-410 2025-01-08 14:15:48,419 pypet.ERROR ERROR ERROR_Test! Process-410 2025-01-08 14:15:48,419 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,426 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-409 2025-01-08 14:15:48,434 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:48,445 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 Process-410 2025-01-08 14:15:48,452 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:48,463 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logging_show_progress_print) ... MainProcess 2025-01-08 14:15:48,725 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:15:48,781 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% Process-411 2025-01-08 14:15:48,796 prostdout CRITICAL Established redirection of `stdout`. Process-411 2025-01-08 14:15:48,797 pypet.ERROR ERROR ERROR_Test! Process-411 2025-01-08 14:15:48,797 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-411 2025-01-08 14:15:48,805 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-412 2025-01-08 14:15:48,806 prostdout CRITICAL Established redirection of `stdout`. Process-412 2025-01-08 14:15:48,808 pypet.ERROR ERROR ERROR_Test! Process-412 2025-01-08 14:15:48,808 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-413 2025-01-08 14:15:48,819 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:15:48,820 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 Process-413 2025-01-08 14:15:48,822 pypet.ERROR ERROR ERROR_Test! Process-413 2025-01-08 14:15:48,823 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-414 2025-01-08 14:15:48,826 prostdout CRITICAL Established redirection of `stdout`. Process-414 2025-01-08 14:15:48,828 pypet.ERROR ERROR ERROR_Test! Process-414 2025-01-08 14:15:48,828 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-412 2025-01-08 14:15:48,829 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:48,840 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-413 2025-01-08 14:15:48,846 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-415 2025-01-08 14:15:48,847 prostdout CRITICAL Established redirection of `stdout`. Process-415 2025-01-08 14:15:48,848 pypet.ERROR ERROR ERROR_Test! Process-415 2025-01-08 14:15:48,848 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,863 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 Process-414 2025-01-08 14:15:48,866 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-416 2025-01-08 14:15:48,872 prostdout CRITICAL Established redirection of `stdout`. Process-416 2025-01-08 14:15:48,874 pypet.ERROR ERROR ERROR_Test! Process-416 2025-01-08 14:15:48,874 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,879 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-415 2025-01-08 14:15:48,886 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-417 2025-01-08 14:15:48,888 prostdout CRITICAL Established redirection of `stdout`. Process-417 2025-01-08 14:15:48,889 pypet.ERROR ERROR ERROR_Test! Process-417 2025-01-08 14:15:48,889 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:15:48,898 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-416 2025-01-08 14:15:48,907 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:48,919 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 Process-417 2025-01-08 14:15:48,925 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:48,935 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_stdout (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logging_stdout) ... MainProcess 2025-01-08 14:15:49,193 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:15:49,212 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2025-01-08 14:15:49,214 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:15:49,538 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_NOT_purge_duplicate_comments) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_a_large_run (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:16:02,462 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__63853_2025_01_08_14h16m02s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_store_single_group) ... MainProcess 2025-01-08 14:16:08,454 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_two_runs) ... ok test_disable (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_disable) ... WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! STORE_Test! in parameter ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_creation_with_errors) ... Process-492 2025-01-08 14:16:20,837 pypet.ERROR ERROR ERROR_Test! Process-492 2025-01-08 14:16:20,837 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-493 2025-01-08 14:16:20,849 pypet.ERROR ERROR ERROR_Test! Process-493 2025-01-08 14:16:20,849 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-494 2025-01-08 14:16:20,860 pypet.ERROR ERROR ERROR_Test! Process-494 2025-01-08 14:16:20,861 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:20,863 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:20,880 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-495 2025-01-08 14:16:20,885 pypet.ERROR ERROR ERROR_Test! Process-495 2025-01-08 14:16:20,886 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:20,892 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-496 2025-01-08 14:16:20,899 pypet.ERROR ERROR ERROR_Test! Process-496 2025-01-08 14:16:20,899 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:20,904 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-497 2025-01-08 14:16:20,913 pypet.ERROR ERROR ERROR_Test! Process-497 2025-01-08 14:16:20,913 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:20,916 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:20,926 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-498 2025-01-08 14:16:20,936 pypet.ERROR ERROR ERROR_Test! Process-498 2025-01-08 14:16:20,936 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:20,945 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:21,222 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_old_way_disabling_mp_log) ... Process-510 pypet.ERROR ERROR ERROR_Test! Process-510 pypet.ERROR ERROR ERROR_Test! Process-510 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-510 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-511 pypet.ERROR ERROR ERROR_Test! Process-511 pypet.ERROR ERROR ERROR_Test! Process-511 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-511 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-512 pypet.ERROR ERROR ERROR_Test! Process-512 pypet.ERROR ERROR ERROR_Test! Process-512 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-512 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-513 pypet.ERROR ERROR ERROR_Test! Process-513 pypet.ERROR ERROR ERROR_Test! Process-513 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-513 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-514 pypet.ERROR ERROR ERROR_Test! Process-514 pypet.ERROR ERROR ERROR_Test! Process-514 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-514 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-515 pypet.ERROR ERROR ERROR_Test! Process-515 pypet.ERROR ERROR ERROR_Test! Process-515 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-515 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-516 pypet.ERROR ERROR ERROR_Test! Process-516 pypet.ERROR ERROR ERROR_Test! Process-516 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-516 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logging_show_progress) ... MainProcess 2025-01-08 14:16:22,237 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% Process-519 2025-01-08 14:16:22,254 pypet.ERROR ERROR ERROR_Test! Process-519 2025-01-08 14:16:22,254 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-520 2025-01-08 14:16:22,265 pypet.ERROR ERROR ERROR_Test! Process-520 2025-01-08 14:16:22,265 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:22,266 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2025-01-08 14:16:22,274 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-521 2025-01-08 14:16:22,277 pypet.ERROR ERROR ERROR_Test! Process-521 2025-01-08 14:16:22,277 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,281 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,290 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 QueueProcess 2025-01-08 14:16:22,297 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-522 2025-01-08 14:16:22,302 pypet.ERROR ERROR ERROR_Test! Process-522 2025-01-08 14:16:22,302 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,310 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,314 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-523 2025-01-08 14:16:22,316 pypet.ERROR ERROR ERROR_Test! Process-523 2025-01-08 14:16:22,316 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,320 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,324 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-524 2025-01-08 14:16:22,328 pypet.ERROR ERROR ERROR_Test! Process-524 2025-01-08 14:16:22,329 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,332 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,340 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2025-01-08 14:16:22,342 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-525 2025-01-08 14:16:22,350 pypet.ERROR ERROR ERROR_Test! Process-525 2025-01-08 14:16:22,351 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:22,357 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2025-01-08 14:16:22,360 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logging_show_progress_print) ... MainProcess 2025-01-08 14:16:22,640 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:22,717 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% QueueProcess 2025-01-08 14:16:22,723 prostdout CRITICAL Established redirection of `stdout`. Process-528 2025-01-08 14:16:22,735 prostdout CRITICAL Established redirection of `stdout`. Process-528 2025-01-08 14:16:22,736 pypet.ERROR ERROR ERROR_Test! Process-528 2025-01-08 14:16:22,736 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-529 2025-01-08 14:16:22,746 prostdout CRITICAL Established redirection of `stdout`. Process-529 2025-01-08 14:16:22,747 pypet.ERROR ERROR ERROR_Test! Process-529 2025-01-08 14:16:22,747 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:22,748 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2025-01-08 14:16:22,755 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-530 2025-01-08 14:16:22,757 prostdout CRITICAL Established redirection of `stdout`. Process-530 2025-01-08 14:16:22,759 pypet.ERROR ERROR ERROR_Test! Process-530 2025-01-08 14:16:22,759 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,765 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,765 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 QueueProcess 2025-01-08 14:16:22,779 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-531 2025-01-08 14:16:22,784 prostdout CRITICAL Established redirection of `stdout`. Process-531 2025-01-08 14:16:22,786 pypet.ERROR ERROR ERROR_Test! Process-531 2025-01-08 14:16:22,786 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,793 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-532 2025-01-08 14:16:22,797 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:22,798 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-532 2025-01-08 14:16:22,799 pypet.ERROR ERROR ERROR_Test! Process-532 2025-01-08 14:16:22,799 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,805 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,807 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-533 2025-01-08 14:16:22,810 prostdout CRITICAL Established redirection of `stdout`. Process-533 2025-01-08 14:16:22,812 pypet.ERROR ERROR ERROR_Test! Process-533 2025-01-08 14:16:22,813 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:22,815 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:22,823 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2025-01-08 14:16:22,825 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-534 2025-01-08 14:16:22,833 prostdout CRITICAL Established redirection of `stdout`. Process-534 2025-01-08 14:16:22,835 pypet.ERROR ERROR ERROR_Test! Process-534 2025-01-08 14:16:22,835 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:22,841 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2025-01-08 14:16:22,844 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_stdout (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logging_stdout) ... MainProcess 2025-01-08 14:16:23,131 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:23,150 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2025-01-08 14:16:23,153 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:23,476 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_expand) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:16:27,725 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__95927` did NOT complete: `run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:16:34,064 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__72197` did NOT complete: `run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:16:40,330 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__96686` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:16:47,028 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__16388` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_if_results_are_sorted_correctly_using_map) ... ok test_disable (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_disable) ... WARNING_Test! WARNING_Test! ERROR_Test! ERROR_Test! CRITICAL_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_creation_with_errors) ... ForkPoolWorker-725 2025-01-08 14:16:50,311 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-725 2025-01-08 14:16:50,311 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2025-01-08 14:16:50,315 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2025-01-08 14:16:50,315 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-725 2025-01-08 14:16:50,319 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-725 2025-01-08 14:16:50,330 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-725 2025-01-08 14:16:50,330 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2025-01-08 14:16:50,336 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-726 2025-01-08 14:16:50,349 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2025-01-08 14:16:50,349 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-725 2025-01-08 14:16:50,350 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-725 2025-01-08 14:16:50,358 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-725 2025-01-08 14:16:50,358 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2025-01-08 14:16:50,360 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-726 2025-01-08 14:16:50,367 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2025-01-08 14:16:50,367 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-725 2025-01-08 14:16:50,368 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-725 2025-01-08 14:16:50,375 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-725 2025-01-08 14:16:50,375 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2025-01-08 14:16:50,377 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-725 2025-01-08 14:16:50,384 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:50,646 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_old_way_disabling_mp_log) ... ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-729 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-729 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logging_show_progress) ... MainProcess 2025-01-08 14:16:51,570 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-731 2025-01-08 14:16:51,576 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 2025-01-08 14:16:51,576 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2025-01-08 14:16:51,580 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2025-01-08 14:16:51,581 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 2025-01-08 14:16:51,584 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,596 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-731 2025-01-08 14:16:51,596 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 2025-01-08 14:16:51,596 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2025-01-08 14:16:51,602 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,614 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 ForkPoolWorker-732 2025-01-08 14:16:51,615 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2025-01-08 14:16:51,615 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 2025-01-08 14:16:51,616 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,622 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-731 2025-01-08 14:16:51,624 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 2025-01-08 14:16:51,624 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2025-01-08 14:16:51,625 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,631 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-732 2025-01-08 14:16:51,633 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2025-01-08 14:16:51,633 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 2025-01-08 14:16:51,634 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,639 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 ForkPoolWorker-731 2025-01-08 14:16:51,640 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 2025-01-08 14:16:51,640 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2025-01-08 14:16:51,642 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,647 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 ForkPoolWorker-731 2025-01-08 14:16:51,649 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:51,655 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logging_show_progress_print) ... MainProcess 2025-01-08 14:16:51,921 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-733 2025-01-08 14:16:51,993 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:51,997 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-733 2025-01-08 14:16:52,003 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2025-01-08 14:16:52,003 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-734 2025-01-08 14:16:52,003 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-734 2025-01-08 14:16:52,007 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2025-01-08 14:16:52,007 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2025-01-08 14:16:52,011 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,022 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-733 2025-01-08 14:16:52,022 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2025-01-08 14:16:52,022 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-734 2025-01-08 14:16:52,028 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,041 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 ForkPoolWorker-734 2025-01-08 14:16:52,041 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2025-01-08 14:16:52,041 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2025-01-08 14:16:52,042 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,048 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-733 2025-01-08 14:16:52,050 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2025-01-08 14:16:52,050 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-734 2025-01-08 14:16:52,051 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,057 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-734 2025-01-08 14:16:52,058 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2025-01-08 14:16:52,058 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2025-01-08 14:16:52,060 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,065 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 ForkPoolWorker-733 2025-01-08 14:16:52,066 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2025-01-08 14:16:52,067 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-734 2025-01-08 14:16:52,068 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,073 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 ForkPoolWorker-733 2025-01-08 14:16:52,075 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,081 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_stdout (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logging_stdout) ... MainProcess 2025-01-08 14:16:52,346 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:52,366 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2025-01-08 14:16:52,368 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:52,698 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_disable (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_disable) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_creation_with_errors) ... ForkPoolWorker-745 2025-01-08 14:16:53,746 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-745 2025-01-08 14:16:53,747 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-746 2025-01-08 14:16:53,749 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2025-01-08 14:16:53,749 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-745 2025-01-08 14:16:53,753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-745 2025-01-08 14:16:53,753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-745 2025-01-08 14:16:53,766 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-745 2025-01-08 14:16:53,766 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-746 2025-01-08 14:16:53,767 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2025-01-08 14:16:53,767 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-745 2025-01-08 14:16:53,771 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-745 2025-01-08 14:16:53,771 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-746 2025-01-08 14:16:53,773 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2025-01-08 14:16:53,773 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:53,776 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:53,788 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:53,797 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:53,804 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:53,812 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:53,820 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:53,827 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:54,104 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_old_way_disabling_mp_log) ... ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-753 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logging_show_progress) ... MainProcess 2025-01-08 14:16:55,129 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-757 2025-01-08 14:16:55,138 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-757 2025-01-08 14:16:55,138 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-758 2025-01-08 14:16:55,141 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2025-01-08 14:16:55,141 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,143 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-757 2025-01-08 14:16:55,144 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-757 2025-01-08 14:16:55,145 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-757 2025-01-08 14:16:55,151 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-757 2025-01-08 14:16:55,151 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,153 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2025-01-08 14:16:55,153 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-758 2025-01-08 14:16:55,154 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2025-01-08 14:16:55,154 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,155 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-757 2025-01-08 14:16:55,157 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-757 2025-01-08 14:16:55,157 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,157 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 ForkPoolWorker-758 2025-01-08 14:16:55,159 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2025-01-08 14:16:55,159 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:55,161 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:55,171 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2025-01-08 14:16:55,174 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:55,181 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2025-01-08 14:16:55,184 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,193 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,201 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,208 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,216 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logging_show_progress_print) ... MainProcess 2025-01-08 14:16:55,499 prostdout CRITICAL Established redirection of `stdout`. QueueProcess 2025-01-08 14:16:55,586 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-761 2025-01-08 14:16:55,597 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:55,600 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-762 2025-01-08 14:16:55,607 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-761 2025-01-08 14:16:55,613 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-761 2025-01-08 14:16:55,613 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-762 2025-01-08 14:16:55,615 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2025-01-08 14:16:55,616 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-761 2025-01-08 14:16:55,619 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-761 2025-01-08 14:16:55,620 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,620 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-761 2025-01-08 14:16:55,630 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-761 2025-01-08 14:16:55,630 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-762 2025-01-08 14:16:55,632 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2025-01-08 14:16:55,632 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,633 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2025-01-08 14:16:55,633 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-762 2025-01-08 14:16:55,636 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2025-01-08 14:16:55,636 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2025-01-08 14:16:55,638 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-761 2025-01-08 14:16:55,638 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-761 2025-01-08 14:16:55,638 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2025-01-08 14:16:55,638 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:55,639 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 MainProcess 2025-01-08 14:16:55,649 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2025-01-08 14:16:55,651 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:55,658 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2025-01-08 14:16:55,661 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,671 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,679 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,687 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2025-01-08 14:16:55,695 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_stdout (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logging_stdout) ... MainProcess 2025-01-08 14:16:55,983 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2025-01-08 14:16:56,002 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2025-01-08 14:16:56,005 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2025-01-08 14:16:56,341 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_NOT_purge_duplicate_comments) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_a_large_run (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:17:08,040 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__10631_2025_01_08_14h17m08s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_store_single_group) ... MainProcess 2025-01-08 14:17:13,392 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_two_runs) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:17:28,957 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__77558` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:17:35,092 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__2515` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:17:41,478 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__86020` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:17:48,041 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__27854` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_if_results_are_sorted_correctly_using_map) ... ok test_NOT_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_a_large_run (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_a_large_run) ... skipped 'Only makes sense if scoop is installed' test_errors (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_errors) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_file_overwriting (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_file_overwriting) ... skipped 'Only makes sense if scoop is installed' test_just_one_run (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_just_one_run) ... skipped 'Only makes sense if scoop is installed' test_niceness (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_niceness) ... skipped 'Only makes sense if scoop is installed' test_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_run (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_run) ... skipped 'Only makes sense if scoop is installed' test_run_complex (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_run_complex) ... skipped 'Only makes sense if scoop is installed' test_store_form_tuple (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_store_form_tuple) ... skipped 'Only makes sense if scoop is installed' test_store_single_group (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_store_single_group) ... skipped 'Only makes sense if scoop is installed' test_switch_ON_large_tables (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_off_all_tables (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_switch_off_all_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_on_all_comments (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_switch_on_all_comments) ... skipped 'Only makes sense if scoop is installed' test_time_display_of_loading (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_time_display_of_loading) ... skipped 'Only makes sense if scoop is installed' test_two_runs (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_two_runs) ... skipped 'Only makes sense if scoop is installed' test_NOT_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed and running' test_a_large_run (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_a_large_run) ... skipped 'Only makes sense if scoop is installed and running' test_errors (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_errors) ... skipped 'Only makes sense if scoop is installed and running' test_expand (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_expand) ... skipped 'Only makes sense if scoop is installed and running' test_expand_after_reload (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed and running' test_file_overwriting (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_file_overwriting) ... skipped 'Only makes sense if scoop is installed and running' test_just_one_run (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_just_one_run) ... skipped 'Only makes sense if scoop is installed and running' test_niceness (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_niceness) ... skipped 'Only makes sense if scoop is installed and running' test_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed and running' test_run (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_run) ... skipped 'Only makes sense if scoop is installed and running' test_run_complex (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_run_complex) ... skipped 'Only makes sense if scoop is installed and running' test_store_form_tuple (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_store_form_tuple) ... skipped 'Only makes sense if scoop is installed and running' test_store_single_group (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_store_single_group) ... skipped 'Only makes sense if scoop is installed and running' test_switch_ON_large_tables (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if scoop is installed and running' test_switch_off_all_tables (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_switch_off_all_tables) ... skipped 'Only makes sense if scoop is installed and running' test_switch_on_all_comments (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_switch_on_all_comments) ... skipped 'Only makes sense if scoop is installed and running' test_time_display_of_loading (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_time_display_of_loading) ... skipped 'Only makes sense if scoop is installed and running' test_two_runs (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_two_runs) ... skipped 'Only makes sense if scoop is installed and running' test_expand (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_f_iter_runs) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs_auto_load (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_f_iter_runs_auto_load) ... skipped 'Only makes sense if scoop is installed' test_graceful_exit (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_graceful_exit) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_if_results_are_sorted_correctly) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_manual_runs (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_if_results_are_sorted_correctly_manual_runs) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_using_map (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_if_results_are_sorted_correctly_using_map) ... skipped 'Only makes sense if scoop is installed' test_giant_matrices (integration.shared_data_test.MultiprocStorageLockTest.test_giant_matrices) ... ok test_loading_run (integration.shared_data_test.MultiprocStorageLockTest.test_loading_run) ... ok test_run (integration.shared_data_test.MultiprocStorageLockTest.test_run) ... ok test_run_large (integration.shared_data_test.MultiprocStorageLockTest.test_run_large) ... ok test_giant_matrices (integration.shared_data_test.MultiprocStorageNetlockTest.test_giant_matrices) ... skipped 'Can only be run with zmq' test_loading_run (integration.shared_data_test.MultiprocStorageNetlockTest.test_loading_run) ... skipped 'Can only be run with zmq' test_run (integration.shared_data_test.MultiprocStorageNetlockTest.test_run) ... skipped 'Can only be run with zmq' test_run_large (integration.shared_data_test.MultiprocStorageNetlockTest.test_run_large) ... skipped 'Can only be run with zmq' test_giant_matrices (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_giant_matrices) ... ok test_loading_run (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_loading_run) ... ok test_run (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_run) ... ok test_run_large (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_run_large) ... ok test_v_property (unittests.utils_test.NamingSchemeTest.test_v_property) ... ok test_v_property_slots (unittests.utils_test.NamingSchemeTest.test_v_property_slots) ... ok test_cannot_expand_and_not_explore_throwing_type_error (pypet.tests.unittests.parameter_test.ParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (pypet.tests.unittests.parameter_test.ParameterTest.test_equal_values) ... ok test_expanding (pypet.tests.unittests.parameter_test.ParameterTest.test_expanding) ... ok test_expanding_type_error (pypet.tests.unittests.parameter_test.ParameterTest.test_expanding_type_error) ... ok test_exploration (pypet.tests.unittests.parameter_test.ParameterTest.test_exploration) ... ok test_get_data (pypet.tests.unittests.parameter_test.ParameterTest.test_get_data) ... ok test_get_item (pypet.tests.unittests.parameter_test.ParameterTest.test_get_item) ... ok test_meta_settings (pypet.tests.unittests.parameter_test.ParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (pypet.tests.unittests.parameter_test.ParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (pypet.tests.unittests.parameter_test.ParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (pypet.tests.unittests.parameter_test.ParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (pypet.tests.unittests.parameter_test.ParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (pypet.tests.unittests.parameter_test.ParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (pypet.tests.unittests.parameter_test.ParameterTest.test_rename) ... ok test_resizing_and_deletion (pypet.tests.unittests.parameter_test.ParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (pypet.tests.unittests.parameter_test.ParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (pypet.tests.unittests.parameter_test.ParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (pypet.tests.unittests.parameter_test.ParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (pypet.tests.unittests.parameter_test.ParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (pypet.tests.unittests.parameter_test.ParameterTest.test_values_of_same_type) ... ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.parameter_test.PickleParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.parameter_test.PickleParameterTest.test_equal_values) ... ok test_expanding (unittests.parameter_test.PickleParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.parameter_test.PickleParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.parameter_test.PickleParameterTest.test_exploration) ... ok test_get_data (unittests.parameter_test.PickleParameterTest.test_get_data) ... ok test_get_item (unittests.parameter_test.PickleParameterTest.test_get_item) ... ok test_meta_settings (unittests.parameter_test.PickleParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.parameter_test.PickleParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.parameter_test.PickleParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.parameter_test.PickleParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.parameter_test.PickleParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.parameter_test.PickleParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.parameter_test.PickleParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.parameter_test.PickleParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.parameter_test.PickleParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.PickleParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.parameter_test.PickleParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.PickleParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.parameter_test.PickleParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.parameter_test.PickleParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.parameter_test.PickleParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.parameter_test.PickleParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.parameter_test.PickleParameterTest.test_values_of_same_type) ... ok test_Attribute_error_for_get_item (unittests.parameter_test.PickleResultTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.parameter_test.PickleResultTest.test_contains) ... ok test_deletion (unittests.parameter_test.PickleResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.parameter_test.PickleResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.parameter_test.PickleResultTest.test_dir) ... ok test_emptying (unittests.parameter_test.PickleResultTest.test_emptying) ... ok test_f_get_errors (unittests.parameter_test.PickleResultTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.parameter_test.PickleResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.parameter_test.PickleResultTest.test_f_to_dict_no_copy) ... ok test_get_data (unittests.parameter_test.PickleResultTest.test_get_data) ... ok test_get_item (unittests.parameter_test.PickleResultTest.test_get_item) ... ok test_getattr_and_setattr (unittests.parameter_test.PickleResultTest.test_getattr_and_setattr) ... ok test_iter (unittests.parameter_test.PickleResultTest.test_iter) ... ok test_meta_settings (unittests.parameter_test.PickleResultTest.test_meta_settings) ... ok test_natural_naming (unittests.parameter_test.PickleResultTest.test_natural_naming) ... ok test_pickling (unittests.parameter_test.PickleResultTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.parameter_test.PickleResultTest.test_reject_outer_data_structure) ... ok test_rename (unittests.parameter_test.PickleResultTest.test_rename) ... ok test_set_item_via_number (unittests.parameter_test.PickleResultTest.test_set_item_via_number) ... ok test_set_numbering (unittests.parameter_test.PickleResultTest.test_set_numbering) ... ok test_storage_and_loading (unittests.parameter_test.PickleResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.PickleResultTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.parameter_test.PickleResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.PickleResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.parameter_test.PickleResultTest.test_warning) ... ok [====================]100.0%ok [====================]100.0%ok test_progressbar_logging (unittests.utils_test.ProgressBarTest.test_progressbar_logging) ... ok [====================]100.0%ok [====================]100.0%ok test_sort (unittests.utils_test.ResultSortFuncTest.test_sort) ... ok test_sort_with_index (unittests.utils_test.ResultSortFuncTest.test_sort_with_index) ... ok test_expand (pypet.tests.integration.environment_test.ResultSortTest.test_expand) ... ok test_expand_after_reload (pypet.tests.integration.environment_test.ResultSortTest.test_expand_after_reload) ... ok test_f_iter_runs (pypet.tests.integration.environment_test.ResultSortTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (pypet.tests.integration.environment_test.ResultSortTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (pypet.tests.integration.environment_test.ResultSortTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:18:47,094 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__95034` did NOT complete: `run_00000005, run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (pypet.tests.integration.environment_test.ResultSortTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (pypet.tests.integration.environment_test.ResultSortTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (pypet.tests.integration.environment_test.ResultSortTest.test_if_results_are_sorted_correctly_using_map) ... ok test_Attribute_error_for_get_item (pypet.tests.unittests.parameter_test.ResultTest.test_Attribute_error_for_get_item) ... ok test_contains (pypet.tests.unittests.parameter_test.ResultTest.test_contains) ... ok test_deletion (pypet.tests.unittests.parameter_test.ResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (pypet.tests.unittests.parameter_test.ResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (pypet.tests.unittests.parameter_test.ResultTest.test_dir) ... ok test_emptying (pypet.tests.unittests.parameter_test.ResultTest.test_emptying) ... ok test_f_get_errors (pypet.tests.unittests.parameter_test.ResultTest.test_f_get_errors) ... ok test_f_get_many_items (pypet.tests.unittests.parameter_test.ResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (pypet.tests.unittests.parameter_test.ResultTest.test_f_to_dict_no_copy) ... ok test_get_data (pypet.tests.unittests.parameter_test.ResultTest.test_get_data) ... ok test_get_item (pypet.tests.unittests.parameter_test.ResultTest.test_get_item) ... ok test_getattr_and_setattr (pypet.tests.unittests.parameter_test.ResultTest.test_getattr_and_setattr) ... ok test_iter (pypet.tests.unittests.parameter_test.ResultTest.test_iter) ... ok test_meta_settings (pypet.tests.unittests.parameter_test.ResultTest.test_meta_settings) ... ok test_natural_naming (pypet.tests.unittests.parameter_test.ResultTest.test_natural_naming) ... ok test_pickling (pypet.tests.unittests.parameter_test.ResultTest.test_pickling) ... ok test_reject_outer_data_structure (pypet.tests.unittests.parameter_test.ResultTest.test_reject_outer_data_structure) ... ok test_rename (pypet.tests.unittests.parameter_test.ResultTest.test_rename) ... ok test_set_item_via_number (pypet.tests.unittests.parameter_test.ResultTest.test_set_item_via_number) ... ok test_set_numbering (pypet.tests.unittests.parameter_test.ResultTest.test_set_numbering) ... ok test_storage_and_loading (pypet.tests.unittests.parameter_test.ResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (pypet.tests.unittests.parameter_test.ResultTest.test_store_load_with_hdf5) ... ok test_string_representation (pypet.tests.unittests.parameter_test.ResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (pypet.tests.unittests.parameter_test.ResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (pypet.tests.unittests.parameter_test.ResultTest.test_warning) ... ok test_fail_after_n_tries (unittests.utils_test.RetryTest.test_fail_after_n_tries) ... I could not execute `RaisesNTypeErrors` with args () and kwargs {}, starting next try. Traceback (most recent call last): File "/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/decorators.py", line 235, in new_func result = func(*args, **kwargs) File "/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/unittests/utils_test.py", line 42, in __call__ raise TypeError('Nope!') TypeError: Nope! ok test_succeeds_after_retries (unittests.utils_test.RetryTest.test_succeeds_after_retries) ... ok test_array_getenum (unittests.shared_data_test.SharedArrayTest.test_array_getenum) ... Failed storing `results.shared_data` Failed storing `results.shared_data` ok test_array_getitem (unittests.shared_data_test.SharedArrayTest.test_array_getitem) ... ok test_array_iter (unittests.shared_data_test.SharedArrayTest.test_array_iter) ... ok test_array_iterrows (unittests.shared_data_test.SharedArrayTest.test_array_iterrows) ... ok test_array_len (unittests.shared_data_test.SharedArrayTest.test_array_len) ... ok test_array_read (unittests.shared_data_test.SharedArrayTest.test_array_read) ... ok test_array_setitem (unittests.shared_data_test.SharedArrayTest.test_array_setitem) ... ok test_table_append (unittests.shared_data_test.SharedTableTest.test_table_append) ... ok test_table_col (unittests.shared_data_test.SharedTableTest.test_table_col) ... ok test_table_flush (unittests.shared_data_test.SharedTableTest.test_table_flush) ... ok test_table_getitem (unittests.shared_data_test.SharedTableTest.test_table_getitem) ... ok test_table_iterrows (unittests.shared_data_test.SharedTableTest.test_table_iterrows) ... ok test_table_read (unittests.shared_data_test.SharedTableTest.test_table_read) ... ok test_table_setitem (unittests.shared_data_test.SharedTableTest.test_table_setitem) ... ok test_table_where (unittests.shared_data_test.SharedTableTest.test_table_where) ... ok test_make_default_file_when_giving_directory_without_slash (integration.environment_test.SimpleEnvironmentTest.test_make_default_file_when_giving_directory_without_slash) ... MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `/tmp/tmp_pypet_tests/trajectory.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. ok test_queue (unittests.trajectory_test.SingleRunQueueTest.test_queue) ... ok test_adding_derived_parameter_and_result (unittests.trajectory_test.SingleRunTest.test_adding_derived_parameter_and_result) ... ok test_auto_prepend (unittests.trajectory_test.SingleRunTest.test_auto_prepend) ... ok test_different_dir (unittests.trajectory_test.SingleRunTest.test_different_dir) ... ok test_if_single_run_can_be_pickled (unittests.trajectory_test.SingleRunTest.test_if_single_run_can_be_pickled) ... ok test_standard_change_param_change (unittests.trajectory_test.SingleRunTest.test_standard_change_param_change) ... ok test_all_slots (unittests.utils_test.SlotsTest.test_all_slots) ... ok test_pickling (unittests.utils_test.SlotsTest.test_pickling) ... ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.parameter_test.SparseParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.parameter_test.SparseParameterTest.test_equal_values) ... ok test_expanding (unittests.parameter_test.SparseParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.parameter_test.SparseParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.parameter_test.SparseParameterTest.test_exploration) ... ok test_get_data (unittests.parameter_test.SparseParameterTest.test_get_data) ... ok test_get_item (unittests.parameter_test.SparseParameterTest.test_get_item) ... ok test_meta_settings (unittests.parameter_test.SparseParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.parameter_test.SparseParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.parameter_test.SparseParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.parameter_test.SparseParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.parameter_test.SparseParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.parameter_test.SparseParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.parameter_test.SparseParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.parameter_test.SparseParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.parameter_test.SparseParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.SparseParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.parameter_test.SparseParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.SparseParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.parameter_test.SparseParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.parameter_test.SparseParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.parameter_test.SparseParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.parameter_test.SparseParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.parameter_test.SparseParameterTest.test_values_of_same_type) ... ok test_Attribute_error_for_get_item (unittests.parameter_test.SparseResultTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.parameter_test.SparseResultTest.test_contains) ... ok test_deletion (unittests.parameter_test.SparseResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.parameter_test.SparseResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.parameter_test.SparseResultTest.test_dir) ... ok test_emptying (unittests.parameter_test.SparseResultTest.test_emptying) ... ok test_f_get_errors (unittests.parameter_test.SparseResultTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.parameter_test.SparseResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.parameter_test.SparseResultTest.test_f_to_dict_no_copy) ... ok test_get_data (unittests.parameter_test.SparseResultTest.test_get_data) ... ok test_get_item (unittests.parameter_test.SparseResultTest.test_get_item) ... ok test_getattr_and_setattr (unittests.parameter_test.SparseResultTest.test_getattr_and_setattr) ... ok test_illegal_naming (unittests.parameter_test.SparseResultTest.test_illegal_naming) ... ok test_iter (unittests.parameter_test.SparseResultTest.test_iter) ... ok test_meta_settings (unittests.parameter_test.SparseResultTest.test_meta_settings) ... ok test_natural_naming (unittests.parameter_test.SparseResultTest.test_natural_naming) ... ok test_pickling (unittests.parameter_test.SparseResultTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.parameter_test.SparseResultTest.test_reject_outer_data_structure) ... ok test_rename (unittests.parameter_test.SparseResultTest.test_rename) ... ok test_set_item_via_number (unittests.parameter_test.SparseResultTest.test_set_item_via_number) ... ok test_set_numbering (unittests.parameter_test.SparseResultTest.test_set_numbering) ... ok test_storage_and_loading (unittests.parameter_test.SparseResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.SparseResultTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.parameter_test.SparseResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.SparseResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.parameter_test.SparseResultTest.test_warning) ... ok test_giant_matrices (integration.shared_data_test.StorageDataEnvironmentTest.test_giant_matrices) ... ok test_loading_run (integration.shared_data_test.StorageDataEnvironmentTest.test_loading_run) ... ok test_run (integration.shared_data_test.StorageDataEnvironmentTest.test_run) ... ok test_run_large (integration.shared_data_test.StorageDataEnvironmentTest.test_run_large) ... ok test_all_arrays (unittests.shared_data_test.StorageDataTrajectoryTests.test_all_arrays) ... ok test_compacting (unittests.shared_data_test.StorageDataTrajectoryTests.test_compacting) ... +=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=+ Recursive copy: True Applying filters: Filters(complevel=9, complib='zlib', shuffle=True, bitshuffle=False, fletcher32=False, least_significant_digit=None) Start copying /tmp/tmp_pypet_tests/hdf5compacting.hdf5:/ to /tmp/tmp_pypet_tests/hdf5compacting_tmp.hdf5:/ +=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=+ Groups copied: 23 , Leaves copied: 26 , Links copied: 0 , Hard links copied: 0 User attrs copied KBytes copied: 95.625 Time copying: 0.111 s (real) 0.109 s (cpu) 98% Copied nodes/sec: 441.3 Copied KB/s : 861 ok test_conversions (unittests.shared_data_test.StorageDataTrajectoryTests.test_conversions) ... ok test_df (unittests.shared_data_test.StorageDataTrajectoryTests.test_df) ... ok test_errors (unittests.shared_data_test.StorageDataTrajectoryTests.test_errors) ... ok test_storing_and_manipulating (unittests.shared_data_test.StorageDataTrajectoryTests.test_storing_and_manipulating) ... ok test_auto_load (unittests.storage_test.StorageTest.test_auto_load) ... Failed loading `Trajectory Testautoload_2025_01_08_14h19m13s (len:1): (config: ), (derived_parameters: ), (results: )` Error while auto-loading `kdsfdsf` under ``. ok test_delete_links (unittests.storage_test.StorageTest.test_delete_links) ... ok test_delete_whole_subtrees (unittests.storage_test.StorageTest.test_delete_whole_subtrees) ... Failed storing `ResultGroup results.mytest.yourtest: (test: )` Failed storing `[('DELETE', )>, (), {})]` Could not remove `[('DELETE', )>, (), {})]` from the trajectory. Maybe the item(s) was/were never stored to disk. ok test_fail_on_wrong_kwarg (unittests.storage_test.StorageTest.test_fail_on_wrong_kwarg) ... ok test_file_size_many_params (unittests.storage_test.StorageTest.test_file_size_many_params) ... ok test_get_default (unittests.storage_test.StorageTest.test_get_default) ... Failed loading `Trajectory Testgetdefault_2025_01_08_14h19m22s (len:1): (config: ), (results: )` Error while auto-loading `results.I.am.run_ALL.a.mean.answ` under ``. Failed loading `Trajectory Testgetdefault_2025_01_08_14h19m22s (len:1): (config: ), (results: )` Error while auto-loading `kdsfdsf` under ``. ok test_hdf5_settings_and_context (unittests.storage_test.StorageTest.test_hdf5_settings_and_context) ... ok test_loading_and_storing_empty_containers (unittests.storage_test.StorageTest.test_loading_and_storing_empty_containers) ... ok test_loading_as_new (unittests.storage_test.StorageTest.test_loading_as_new) ... ok test_loading_explored_parameters (unittests.storage_test.StorageTest.test_loading_explored_parameters) ... ok test_max_depth_loading_and_storing (unittests.storage_test.StorageTest.test_max_depth_loading_and_storing) ... ok test_maximum_overview_size (unittests.storage_test.StorageTest.test_maximum_overview_size) ... ok test_migrations (unittests.storage_test.StorageTest.test_migrations) ... ok test_new_assignment_method (unittests.storage_test.StorageTest.test_new_assignment_method) ... Failed adding `jj` under `parameters`. Failed adding `jj` under `results`. Failed adding `jj` under `config`. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `parameters`. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `config`. Failed adding `jj` under ``. Failed adding `jj` under `parameters`. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `results`. Failed adding `jj` under ``. Failed adding `jj` under `parameters`. Failed adding `jj` under `config`. Failed adding `jj` under `results`. Failed adding `jj` under ``. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `results`. Failed adding `jj` under `config`. Failed adding `jj` under ``. ok test_no_run_information_loading (unittests.storage_test.StorageTest.test_no_run_information_loading) ... ok test_overwrite_annotations_and_results (unittests.storage_test.StorageTest.test_overwrite_annotations_and_results) ... ok test_overwrite_stuff (unittests.storage_test.StorageTest.test_overwrite_stuff) ... Cannot overwrite `{'b'}`, these items are not supposed to be stored by the leaf node. ok test_partial_loading (unittests.storage_test.StorageTest.test_partial_loading) ... You marked {'x'} for load only, but I cannot find these for `results.mytest.test` You marked `{'d'}` for not loading, but these were not part of `results.mytest.test` anyway. Failed loading `Result results.mytest.test: a='b'` Failed loading `[('LEAF', , (), {'load_except': ['x'], 'load_only': ['y']})]` ok test_partially_delete_stuff (unittests.storage_test.StorageTest.test_partially_delete_stuff) ... ok test_removal_of_error_parameter (unittests.storage_test.StorageTest.test_removal_of_error_parameter) ... Failed storing leaf `results.j.j.josie`. I will remove the hdf5 data I added again. Failed storing `Trajectory traj_2025_01_08_14h19m35s (len:1): (config: ), (results: )` Failed storing leaf `results.j.j.josie2`. I will remove the hdf5 data I added again. Failed storing `Trajectory traj_2025_01_08_14h19m35s (len:1): (config: ), (results: )` ok test_shortenings_of_names (unittests.storage_test.StorageTest.test_shortenings_of_names) ... ok test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors) ... Failed storing `test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors)` Failed storing `test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors)` Failed storing `test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors)` Failed loading `Trajectory my_trajectory_2025_01_08_14h19m35s (len:1): (config: )` Failed storing `[('LEAF', None, None, None, None)]` Failed loading `Trajectory my_trajectory_2025_01_08_14h19m35s (len:1): (config: )` Failed loading `Trajectory my_trajectory_2025_01_08_14h19m35s (len:1): (config: )` ok test_store_and_load_large_dictionary (unittests.storage_test.StorageTest.test_store_and_load_large_dictionary) ... ok test_store_items_and_groups (unittests.storage_test.StorageTest.test_store_items_and_groups) ... ok test_store_overly_long_comment (unittests.storage_test.StorageTest.test_store_overly_long_comment) ... ok test_storing_and_loading_groups (unittests.storage_test.StorageTest.test_storing_and_loading_groups) ... ok test_version_mismatch (unittests.storage_test.StorageTest.test_version_mismatch) ... Failed loading `Trajectory TestVERSION_2025_01_08_14h19m37s (len:1): (config: )` Current pypet version is 0.6.1 with python 3.13.1 but your trajectory was created with version 0.1a.1 under python 3.13.1. Yet, you enforced the load, so I will handle the trajectory despite the version mismatch. ok test_wildcard_search (unittests.storage_test.StorageTest.test_wildcard_search) ... ok test_if_all_is_complete (unittests.brian2tests.module_test.TestAllBrian2Import.test_if_all_is_complete) ... ok test_import_star (unittests.brian2tests.module_test.TestAllBrian2Import.test_import_star) ... ok test_if_all_is_complete (unittests.module_test.TestAllImport.test_if_all_is_complete) ... ok test_import_star (unittests.module_test.TestAllImport.test_import_star) ... ok test_consecutive_merges (integration.merge_test.TestConsecutiveMerges.test_consecutive_merges) ... MainProcess 2025-01-08 14:20:03,693 root ERROR R and Alpha of consecutive merge test (-0.6987536521346673, 5.322448985063247e-07) ok test_merge_all_in_folder (integration.merge_test.TestConsecutiveMerges.test_merge_all_in_folder) ... ok test_merge_many (integration.merge_test.TestConsecutiveMerges.test_merge_many) ... ok test_flatten_dictionary (unittests.utils_test.TestDictionaryMethods.test_flatten_dictionary) ... ok test_nest_dicitionary (unittests.utils_test.TestDictionaryMethods.test_nest_dicitionary) ... ok test_nested_equal (unittests.utils_test.TestEqualityOperations.test_nested_equal) ... ok test_find_unique (unittests.utils_test.TestFindUnique.test_find_unique) ... Your parameter entries could not be hashed, now I am sorting slowly in O(N**2). Your parameter entries could not be hashed, now I am sorting slowly in O(N**2). ok test_iter (unittests.utils_test.TestIteratorChain.test_iter) ... ok test_next (unittests.utils_test.TestIteratorChain.test_next) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcLocal.test_pipeline) ... Executing command `ptrepack -v --complib zlib --complevel 9 --shuffle 1 --fletcher32 0 /tmp/tmp_pypet_tests/hdf5compacting.hdf5 /tmp/tmp_pypet_tests/hdf5compacting_tmp.hdf5` #### Compacting successful #### Renaming files ### Compacting and Renaming finished #### ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcLocal.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcLocal.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcLocal.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcLock.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcLock.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcLock.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcLock.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcPipe.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcPipe.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcPipe.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcPipe.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcQueue.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcQueue.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcQueue.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcQueue.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPPostProc.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPPostProc.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPPostProc.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPPostProc.test_postprocessing_iter_args) ... ok test_expand (integration.merge_test.TestMergeResultsSort.test_expand) ... ok test_expand_after_reload (integration.merge_test.TestMergeResultsSort.test_expand_after_reload) ... ok test_f_iter_runs (integration.merge_test.TestMergeResultsSort.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.merge_test.TestMergeResultsSort.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.merge_test.TestMergeResultsSort.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2025-01-08 14:20:51,213 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__83226` did NOT complete: `run_00000005, run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.merge_test.TestMergeResultsSort.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.merge_test.TestMergeResultsSort.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.merge_test.TestMergeResultsSort.test_if_results_are_sorted_correctly_using_map) ... ok test_merge_normally (integration.merge_test.TestMergeResultsSort.test_merge_normally) ... ok test_merge_remove_duplicates (integration.merge_test.TestMergeResultsSort.test_merge_remove_duplicates) ... ok test_concurrent_pool (unittests.mpwrappers_test.TestNetLock.test_concurrent_pool) ... skipped 'Cannot be run without zmq' test_concurrent_pool_faulty (unittests.mpwrappers_test.TestNetLock.test_concurrent_pool_faulty) ... skipped 'Cannot be run without zmq' test_concurrent_scoop (unittests.mpwrappers_test.TestNetLock.test_concurrent_scoop) ... skipped 'Cannot be run without zmq' test_errors (unittests.mpwrappers_test.TestNetLock.test_errors) ... skipped 'Cannot be run without zmq' test_single_core (unittests.mpwrappers_test.TestNetLock.test_single_core) ... skipped 'Cannot be run without zmq' test_timout_pool (unittests.mpwrappers_test.TestNetLock.test_timout_pool) ... skipped 'Cannot be run without zmq' test_NOT_purge_duplicate_comments (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_a_large_run) ... ok test_errors (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_errors) ... ok test_expand (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_expand) ... ok test_expand_after_reload (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_expand_after_reload) ... ok test_file_overwriting (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_file_overwriting) ... ok test_just_one_run (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_just_one_run) ... ok test_niceness (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_niceness) ... ok test_purge_duplicate_comments (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:21:05,227 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__57483_2025_01_08_14h21m05s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_run) ... ok test_run_complex (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_run_complex) ... ok test_store_form_tuple (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_store_form_tuple) ... ok test_store_single_group (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_store_single_group) ... MainProcess 2025-01-08 14:21:09,886 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_switch_off_all_tables) ... ok test_switch_on_all_comments (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_switch_on_all_comments) ... ok test_time_display_of_loading (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_time_display_of_loading) ... ok test_two_runs (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_two_runs) ... ok test_NOT_purge_duplicate_comments (integration.environment_test.TestOtherHDF5Settings.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (integration.environment_test.TestOtherHDF5Settings.test_a_large_run) ... ok test_errors (integration.environment_test.TestOtherHDF5Settings.test_errors) ... ok test_expand (integration.environment_test.TestOtherHDF5Settings.test_expand) ... ok test_expand_after_reload (integration.environment_test.TestOtherHDF5Settings.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_test.TestOtherHDF5Settings.test_file_overwriting) ... ok test_just_one_run (integration.environment_test.TestOtherHDF5Settings.test_just_one_run) ... ok test_niceness (integration.environment_test.TestOtherHDF5Settings.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_test.TestOtherHDF5Settings.test_purge_duplicate_comments) ... MainProcess 2025-01-08 14:21:28,363 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__91131_2025_01_08_14h21m28s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_test.TestOtherHDF5Settings.test_run) ... ok test_run_complex (integration.environment_test.TestOtherHDF5Settings.test_run_complex) ... ok test_store_form_tuple (integration.environment_test.TestOtherHDF5Settings.test_store_form_tuple) ... ok test_store_single_group (integration.environment_test.TestOtherHDF5Settings.test_store_single_group) ... MainProcess 2025-01-08 14:21:32,628 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_test.TestOtherHDF5Settings.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_test.TestOtherHDF5Settings.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_test.TestOtherHDF5Settings.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_test.TestOtherHDF5Settings.test_time_display_of_loading) ... ok test_two_runs (integration.environment_test.TestOtherHDF5Settings.test_two_runs) ... ok test_pipeline (integration.pipeline_test.TestPostProc.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestPostProc.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestPostProc.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestPostProc.test_postprocessing_iter_args) ... ok test_run_one_test (unittests.module_test.TestRunningTests.test_run_one_test) ... test_import_star (unittests.module_test.TestAllImport.test_import_star) ... ok ---------------------------------------------------------------------- Ran 1 test in 0.001s OK ok test_copy_custom_parameter (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_custom_parameter) ... ok test_copy_explored (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_explored) ... ok test_copy_links (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_links) ... ok test_copy_tree_annotations (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_tree_annotations) ... ok test_copy_tree_simple (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_tree_simple) ... ok test_not_copy_from_node (unittests.trajectory_test.TrajectoryCopyTreeTest.test_not_copy_from_node) ... ok test_not_copy_leaves (unittests.trajectory_test.TrajectoryCopyTreeTest.test_not_copy_leaves) ... ok test_overwrite (unittests.trajectory_test.TrajectoryCopyTreeTest.test_overwrite) ... ok test_overwrite_leaves (unittests.trajectory_test.TrajectoryCopyTreeTest.test_overwrite_leaves) ... ok test_shallow_copy (unittests.trajectory_test.TrajectoryCopyTreeTest.test_shallow_copy) ... ok test_shallow_copy_not_full_copy (unittests.trajectory_test.TrajectoryCopyTreeTest.test_shallow_copy_not_full_copy) ... ok test_complex_find_statement (unittests.trajectory_test.TrajectoryFindTest.test_complex_find_statement) ... ok test_find_nothing (unittests.trajectory_test.TrajectoryFindTest.test_find_nothing) ... ok test_simple_find_idx (unittests.trajectory_test.TrajectoryFindTest.test_simple_find_idx) ... ok test_attribute_error_raises_when_leaf_and_group_with_same_name_are_added (unittests.trajectory_test.TrajectoryTest.test_attribute_error_raises_when_leaf_and_group_with_same_name_are_added) ... Failed adding `param2` under ``. Failed adding `test` under ``. ok test_change_properties_with_environment (unittests.trajectory_test.TrajectoryTest.test_change_properties_with_environment) ... ok test_changing (unittests.trajectory_test.TrajectoryTest.test_changing) ... ok test_changing_of_result (unittests.trajectory_test.TrajectoryTest.test_changing_of_result) ... ok test_contains_item_identity (unittests.trajectory_test.TrajectoryTest.test_contains_item_identity) ... ok test_data_dir (unittests.trajectory_test.TrajectoryTest.test_data_dir) ... ok test_debug (unittests.trajectory_test.TrajectoryTest.test_debug) ... ok test_deletion (unittests.trajectory_test.TrajectoryTest.test_deletion) ... ok test_deletion_during_run (unittests.trajectory_test.TrajectoryTest.test_deletion_during_run) ... ok test_dir (unittests.trajectory_test.TrajectoryTest.test_dir) ... ok test_dynamic_class_loading (unittests.trajectory_test.TrajectoryTest.test_dynamic_class_loading) ... ok test_f_get (unittests.trajectory_test.TrajectoryTest.test_f_get) ... ok test_f_get_run_information (unittests.trajectory_test.TrajectoryTest.test_f_get_run_information) ... ok test_f_getting_of_children (unittests.trajectory_test.TrajectoryTest.test_f_getting_of_children) ... ok test_f_is_completed (unittests.trajectory_test.TrajectoryTest.test_f_is_completed) ... ok test_find_in_all_runs (unittests.trajectory_test.TrajectoryTest.test_find_in_all_runs) ... ok test_find_in_all_runs_with_groups (unittests.trajectory_test.TrajectoryTest.test_find_in_all_runs_with_groups) ... ok test_get_all (unittests.trajectory_test.TrajectoryTest.test_get_all) ... ok test_get_children (unittests.trajectory_test.TrajectoryTest.test_get_children) ... ok test_get_data_dictionaries_directly (unittests.trajectory_test.TrajectoryTest.test_get_data_dictionaries_directly) ... ok test_get_item (unittests.trajectory_test.TrajectoryTest.test_get_item) ... ok test_if_picklable (unittests.trajectory_test.TrajectoryTest.test_if_picklable) ... ok test_illegal_namings (unittests.trajectory_test.TrajectoryTest.test_illegal_namings) ... ok test_iter_bfs (unittests.trajectory_test.TrajectoryTest.test_iter_bfs) ... ok test_iter_bfs_as_run (unittests.trajectory_test.TrajectoryTest.test_iter_bfs_as_run) ... ok test_iter_leaves (unittests.trajectory_test.TrajectoryTest.test_iter_leaves) ... ok test_kids (unittests.trajectory_test.TrajectoryTest.test_kids) ... ok test_lazy_setitem (unittests.trajectory_test.TrajectoryTest.test_lazy_setitem) ... ok test_max_depth (unittests.trajectory_test.TrajectoryTest.test_max_depth) ... ok test_mutual_exclusive_kwargs (unittests.trajectory_test.TrajectoryTest.test_mutual_exclusive_kwargs) ... ok test_new_grouping (unittests.trajectory_test.TrajectoryTest.test_new_grouping) ... ok test_no_clobber (unittests.trajectory_test.TrajectoryTest.test_no_clobber) ... MainProcess 2025-01-08 14:21:47,979 pypet.naturalnaming.NaturalNamingInterface ERROR Failed adding `test2` under ``. MainProcess 2025-01-08 14:21:47,980 pypet.naturalnaming.NaturalNamingInterface ERROR Failed adding `test` under ``. ok test_no_prefixes (unittests.trajectory_test.TrajectoryTest.test_no_prefixes) ... ok test_not_adding_pars_during_single_run (unittests.trajectory_test.TrajectoryTest.test_not_adding_pars_during_single_run) ... ok test_not_increase_exploration (unittests.trajectory_test.TrajectoryTest.test_not_increase_exploration) ... ok test_not_unique_search (unittests.trajectory_test.TrajectoryTest.test_not_unique_search) ... ok test_prefixes_dir (unittests.trajectory_test.TrajectoryTest.test_prefixes_dir) ... ok test_re_raise_old_wildcard_error (unittests.trajectory_test.TrajectoryTest.test_re_raise_old_wildcard_error) ... ok test_remove (unittests.trajectory_test.TrajectoryTest.test_remove) ... ok test_remove_of_all_type (unittests.trajectory_test.TrajectoryTest.test_remove_of_all_type) ... ok test_remove_of_explored_stuff_if_not_saved (unittests.trajectory_test.TrajectoryTest.test_remove_of_explored_stuff_if_not_saved) ... ok test_remove_of_explored_stuff_if_saved (unittests.trajectory_test.TrajectoryTest.test_remove_of_explored_stuff_if_saved) ... ok test_root_getting (unittests.trajectory_test.TrajectoryTest.test_root_getting) ... ok test_short_cuts (unittests.trajectory_test.TrajectoryTest.test_short_cuts) ... ok test_short_names_and_nested_failure (unittests.trajectory_test.TrajectoryTest.test_short_names_and_nested_failure) ... ok test_short_names_to_dict_failure (unittests.trajectory_test.TrajectoryTest.test_short_names_to_dict_failure) ... ok test_shrink (unittests.trajectory_test.TrajectoryTest.test_shrink) ... ok test_standard_change_param_change (unittests.trajectory_test.TrajectoryTest.test_standard_change_param_change) ... ok test_to_nested_dict (unittests.trajectory_test.TrajectoryTest.test_to_nested_dict) ... ok test_to_nested_dict_intermediate_node (unittests.trajectory_test.TrajectoryTest.test_to_nested_dict_intermediate_node) ... ok test_to_nested_dict_intermediate_node2 (unittests.trajectory_test.TrajectoryTest.test_to_nested_dict_intermediate_node2) ... ok test_truncation_of_string_statements_of_group_nodes (unittests.trajectory_test.TrajectoryTest.test_truncation_of_string_statements_of_group_nodes) ... ok ---------------------------------------------------------------------- Ran 923 tests in 615.669s OK (skipped=122) + pushd pypet/tests ~/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet/tests ~/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 all_examples.py IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_01.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_01.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG The result of `run_00000001` is: 7 IMPORTED MATPLOTLIB WITH AGG The full name of the new Skywalker Parameter is parameters.starwars.characters.luke_skywalker Damn it, there are two characters groups in the trajectory: NotUniqueNodeError('Node `characters` has been found more than once within the same depth 3. Full name of first occurrence is `parameters.starwars.characters` and of second `parameters.spaceballs.characters`') The name of the actor playing Luke is Mark Hamill. The object found for luke_skywalker is `Parameter parameters.starwars.characters.luke_skywalker (`May the force be with you!`): 'Mark Hamill'`. Help me Obiwan! Nothing there! George Lucas earned 111566834666.53162$$$! MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_03.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_03.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Traj1_2025_01_08_14h21m52s`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Traj1_2025_01_08_14h21m52s`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Traj1_2025_01_08_14h21m52s` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Traj1_2025_01_08_14h21m52s`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Traj1_2025_01_08_14h21m52s` were completed successfully. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Traj2_2025_01_08_14h21m52s`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Traj2_2025_01_08_14h21m52s`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Traj2_2025_01_08_14h21m52s` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Traj2_2025_01_08_14h21m52s`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Traj2_2025_01_08_14h21m52s` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Traj2_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing backup of Traj2_2025_01_08_14h21m52s. MainProcess pypet.storageservice.HDF5StorageService INFO Finished backup of Traj2_2025_01_08_14h21m52s. MainProcess pypet.storageservice.HDF5StorageService INFO Storing backup of Traj1_2025_01_08_14h21m52s. MainProcess pypet.storageservice.HDF5StorageService INFO Finished backup of Traj1_2025_01_08_14h21m52s. MainProcess pypet.trajectory.Trajectory INFO Merging the parameters MainProcess pypet.trajectory.Trajectory INFO Merging run information MainProcess pypet.trajectory.Trajectory INFO Merging derived parameters MainProcess pypet.trajectory.Trajectory INFO Start copying results and single run derived parameters MainProcess pypet.trajectory.Trajectory INFO Updating Trajectory information and changed parameters in storage MainProcess pypet.trajectory.Trajectory INFO Merging config! MainProcess pypet.trajectory.Trajectory INFO Merging environment config! MainProcess pypet.trajectory.Trajectory INFO Merging config successful! MainProcess pypet.trajectory.Trajectory INFO Adding merge information MainProcess pypet.trajectory.Trajectory INFO Writing merged data to disk MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `results`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `derived_parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.trajectory.Trajectory INFO Finished Merging! MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Traj1_2025_01_08_14h21m52s`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG run_00000000: x=1.000000, y=6.000000, z=6.000000 run_00000001: x=1.000000, y=7.000000, z=7.000000 run_00000002: x=1.000000, y=8.000000, z=8.000000 run_00000003: x=2.000000, y=6.000000, z=12.000000 run_00000004: x=2.000000, y=7.000000, z=14.000000 run_00000005: x=2.000000, y=8.000000, z=16.000000 run_00000006: x=3.000000, y=6.000000, z=18.000000 run_00000007: x=3.000000, y=7.000000, z=21.000000 run_00000008: x=3.000000, y=8.000000, z=24.000000 run_00000009: x=4.000000, y=6.000000, z=24.000000 run_00000010: x=4.000000, y=7.000000, z=28.000000 run_00000011: x=4.000000, y=8.000000, z=32.000000 run_00000012: x=3.000000, y=9.000000, z=27.000000 run_00000013: x=4.000000, y=9.000000, z=36.000000 run_00000014: x=5.000000, y=7.000000, z=35.000000 run_00000015: x=5.000000, y=8.000000, z=40.000000 run_00000016: x=5.000000, y=9.000000, z=45.000000 run_00000017: x=6.000000, y=7.000000, z=42.000000 run_00000018: x=6.000000, y=8.000000, z=48.000000 run_00000019: x=6.000000, y=9.000000, z=54.000000 MainProcess STDOUT INFO Established redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_04.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_04_MP`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_04_MP`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_04_MP`. MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting Pool with 4 processes MainProcess pypet.environment.Environment INFO Freezing pool input MainProcess pypet INFO PROGRESS: Finished 0/400 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 20/400 runs [= ] 5.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 40/400 runs [== ] 10.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 60/400 runs [=== ] 15.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 80/400 runs [==== ] 20.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 100/400 runs [===== ] 25.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 120/400 runs [====== ] 30.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 140/400 runs [======= ] 35.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 160/400 runs [======== ] 40.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 180/400 runs [========= ] 45.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 200/400 runs [========== ] 50.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 220/400 runs [=========== ] 55.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 240/400 runs [============ ] 60.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 260/400 runs [============= ] 65.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 280/400 runs [============== ] 70.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 300/400 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 320/400 runs [================ ] 80.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 340/400 runs [================= ] 85.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 360/400 runs [================== ] 90.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 380/400 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 400/400 runs [====================]100.0% MainProcess pypet.environment.Environment INFO Pool has joined, will delete it. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_04_MP`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_04_MP`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_04_MP` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_04_MP`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_04_MP`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_04_MP` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Disabled redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_05.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_05_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_05_Euler_Integration`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/3 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/3 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/3 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/3 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_05_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_05_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_05_Euler_Integration` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/parameter.py:1305: FutureWarning: ChainedAssignmentError: behaviour will change in pandas 3.0! You are setting values through chained assignment. Currently this works in certain cases, but when using Copy-on-Write (which will become the default behaviour in pandas 3.0) this will never work to update the original DataFrame or Series, because the intermediate object on which we are setting values will behave as a copy. A typical example is when you are setting values in a column of a DataFrame, like: df["col"][row_indexer] = value Use `df.loc[row_indexer, "col"] = values` instead, to perform the assignment in a single step and ensure this keeps updating the original `df`. See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy store_dict["explored_data" + ArrayParameter.IDENTIFIER]["idx"][ MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `derived_parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_05_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_05_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_05_Euler_Integration` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_05.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService ERROR Failed loading `Trajectory Example_05_Euler_Integration (`Go for Euler!`, len:3): (config: ), (derived_parameters: )` MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_05.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. IMPORTED MATPLOTLIB WITH AGG That did'nt work, I am sorry: Could not create the class named `FunctionParameter`. ---------- The source code of your function ---------- def diff_lorenz(value_array, sigma, beta, rho): """The Lorenz attractor differential equation :param value_array: 3d array containing the x,y, and z component values. :param sigma: Constant attractor parameter :param beta: FConstant attractor parameter :param rho: Constant attractor parameter :return: 3d array of the Lorenz system evaluated at `value_array` """ diff_array = np.zeros(3) diff_array[0] = sigma * (value_array[1]-value_array[0]) diff_array[1] = value_array[0] * (rho - value_array[2]) - value_array[1] diff_array[2] = value_array[0] * value_array[1] - beta * value_array[2] return diff_array MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_06.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.naturalnaming.NaturalNamingInterface INFO You have marked parameter parameters.diff_name for change before, so here you go! MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_06_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_06_Euler_Integration`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/3 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/3 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/3 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/3 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_06_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_06_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_06_Euler_Integration` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/parameter.py:1305: FutureWarning: ChainedAssignmentError: behaviour will change in pandas 3.0! You are setting values through chained assignment. Currently this works in certain cases, but when using Copy-on-Write (which will become the default behaviour in pandas 3.0) this will never work to update the original DataFrame or Series, because the intermediate object on which we are setting values will behave as a copy. A typical example is when you are setting values in a column of a DataFrame, like: df["col"][row_indexer] = value Use `df.loc[row_indexer, "col"] = values` instead, to perform the assignment in a single step and ensure this keeps updating the original `df`. See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy store_dict["explored_data" + ArrayParameter.IDENTIFIER]["idx"][ MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `derived_parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_06_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_06_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_06_Euler_Integration` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. IMPORTED MATPLOTLIB WITH AGG ---------- The source code of your function ---------- def diff_roessler(value_array, a, c): """The Roessler attractor differential equation :param value_array: 3d array containing the x,y, and z component values. :param a: Constant attractor parameter :param c: Constant attractor parameter :return: 3d array of the Roessler system evaluated at `value_array` """ b=a diff_array = np.zeros(3) diff_array[0] = -value_array[1] - value_array[2] diff_array[1] = value_array[0] + a * value_array[1] diff_array[2] = b + value_array[2] * (value_array[0] - c) return diff_array MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_08.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example08`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example08`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example08`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example08`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example08` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example08`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example08`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example08` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG The run names and results for parameter combinations with x==2 or y==8: run_00000002: x=1, y=8, z=8 run_00000003: x=2, y=6, z=12 run_00000004: x=2, y=7, z=14 run_00000005: x=2, y=8, z=16 run_00000008: x=3, y=8, z=24 run_00000011: x=4, y=8, z=32 IMPORTED MATPLOTLIB WITH AGG mat1 contains 0.512046 at position [10,10,10] mat2 contains 0.903893 at position [42,13] As promised: Nothing there! Told you! mat1 contains 0.512046 at position [10,10,10] And do not forget: Always look on the bright side of life! MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_10.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example10`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example10`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/144 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #1 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #2 of 144 ========================================= MainProcess pypet INFO 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INFO ========================================= Starting single run #138 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #138 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #139 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #139 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #140 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #140 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #141 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #141 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #142 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #142 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #143 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #143 of 144 ========================================= MainProcess pypet INFO PROGRESS: Finished 144/144 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example10`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example10`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example10` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example10`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example10`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example10` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_12.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 2 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. [ 6 7 8 12 14 16 18 21 24 24 28 32] MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_14.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/2 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 2 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 2 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/2 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 2 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 2 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/2 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch/node `mylink1`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. IMPORTED MATPLOTLIB WITH AGG x=1 Parameter parameters.x (len:2, `I am the first dimension!`): 1 IMPORTED MATPLOTLIB WITH AGG t=1 w=2 Linking to x gives: 1 INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `hdf5/example_16.hdf5`. INFO:pypet.storageservice.HDF5StorageService:Initialising storage or updating meta data of Trajectory `my_trajectory`. INFO:pypet.storageservice.HDF5StorageService:Finished init or meta data update for `my_trajectory`. IMPORTED MATPLOTLIB WITH AGG The last process to manipulate the trajectory was: `ForkPoolWorker-2` MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_18.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting Pool with 2 processes MainProcess pypet.environment.Environment INFO Freezing pool input MainProcess pypet INFO PROGRESS: Finished 0/2500 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 125/2500 runs [= ] 5.0%, remaining: 0:00:13 MainProcess pypet INFO PROGRESS: Finished 250/2500 runs [== ] 10.0%, remaining: 0:00:15 MainProcess pypet INFO PROGRESS: Finished 375/2500 runs [=== ] 15.0%, remaining: 0:00:15 MainProcess pypet INFO PROGRESS: Finished 500/2500 runs [==== ] 20.0%, remaining: 0:00:15 MainProcess pypet INFO PROGRESS: Finished 625/2500 runs [===== ] 25.0%, remaining: 0:00:14 MainProcess pypet INFO PROGRESS: Finished 750/2500 runs [====== ] 30.0%, remaining: 0:00:13 MainProcess pypet INFO PROGRESS: Finished 875/2500 runs [======= ] 35.0%, remaining: 0:00:13 MainProcess pypet INFO PROGRESS: Finished 1000/2500 runs [======== ] 40.0%, remaining: 0:00:12 MainProcess pypet INFO PROGRESS: Finished 1125/2500 runs [========= ] 45.0%, remaining: 0:00:11 MainProcess pypet INFO PROGRESS: Finished 1250/2500 runs [========== ] 50.0%, remaining: 0:00:10 MainProcess pypet INFO PROGRESS: Finished 1375/2500 runs [=========== ] 55.0%, remaining: 0:00:09 MainProcess pypet INFO PROGRESS: Finished 1500/2500 runs [============ ] 60.0%, remaining: 0:00:08 MainProcess pypet INFO PROGRESS: Finished 1625/2500 runs [============= ] 65.0%, remaining: 0:00:07 MainProcess pypet INFO PROGRESS: Finished 1750/2500 runs [============== ] 70.0%, remaining: 0:00:06 MainProcess pypet INFO PROGRESS: Finished 1875/2500 runs [=============== ] 75.0%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 2000/2500 runs [================ ] 80.0%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 2125/2500 runs [================= ] 85.0%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 2250/2500 runs [================== ] 90.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 2375/2500 runs [=================== ] 95.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 2500/2500 runs [====================]100.0% MainProcess pypet.environment.Environment INFO Pool has joined, will delete it. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. The result of run 2042 is: 1680 The result of run 2044 is: 1760 IMPORTED MATPLOTLIB WITH AGG Start of evolution -- Generation 0 -- Evaluated 100 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 -- Generation 1 -- Evaluated 61 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 -- Generation 2 -- Evaluated 62 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 -- Generation 3 -- Evaluated 66 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 -- Generation 4 -- Evaluated 66 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 -- Generation 5 -- Evaluated 53 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 -- Generation 6 -- Evaluated 58 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 -- Generation 7 -- Evaluated 73 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 -- Generation 8 -- Evaluated 61 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 -- Generation 9 -- Evaluated 56 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 -- Generation 10 -- Evaluated 60 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 -- Generation 11 -- Evaluated 59 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 -- Generation 12 -- Evaluated 65 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 -- Generation 13 -- Evaluated 68 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 -- Generation 14 -- Evaluated 50 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 -- Generation 15 -- Evaluated 68 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 -- Generation 16 -- Evaluated 60 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 -- Generation 17 -- Evaluated 53 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 -- Generation 18 -- Evaluated 53 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 -- Generation 19 -- Evaluated 60 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) IMPORTED MATPLOTLIB WITH AGG Start of evolution -- Generation 0 -- Evaluated 100 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 -- Generation 1 -- Evaluated 61 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 -- Generation 2 -- Evaluated 62 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 -- Generation 3 -- Evaluated 66 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 -- Generation 4 -- Evaluated 66 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 -- Generation 5 -- Evaluated 53 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 -- Generation 6 -- Evaluated 58 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 -- Generation 7 -- Evaluated 73 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 -- Generation 8 -- Evaluated 61 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 -- Generation 9 -- Evaluated 56 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 -- Generation 10 -- Evaluated 60 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 -- Generation 11 -- Evaluated 59 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 -- Generation 12 -- Evaluated 65 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 -- Generation 13 -- Evaluated 68 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 -- Generation 14 -- Evaluated 50 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 -- Generation 15 -- Evaluated 68 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 -- Generation 16 -- Evaluated 60 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 -- Generation 17 -- Evaluated 53 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 -- Generation 18 -- Evaluated 53 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 -- Generation 19 -- Evaluated 60 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) IMPORTED MATPLOTLIB WITH AGG Evaluated 0 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 Evaluated 0 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 Evaluated 0 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 Evaluated 0 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 Evaluated 0 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 Evaluated 0 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 Evaluated 0 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 Evaluated 0 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 Evaluated 0 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 Evaluated 0 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 Evaluated 0 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 Evaluated 0 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 Evaluated 0 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 Evaluated 0 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 Evaluated 0 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 Evaluated 0 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 Evaluated 0 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 Evaluated 0 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 Evaluated 0 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 Evaluated 0 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) IMPORTED MATPLOTLIB WITH AGG Start of evolution -- Generation 0 -- Evaluated 100 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 -- Generation 1 -- Evaluated 61 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 -- Generation 2 -- Evaluated 62 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 -- Generation 3 -- Evaluated 66 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 -- Generation 4 -- Evaluated 66 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 -- Generation 5 -- Evaluated 53 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 -- Generation 6 -- Evaluated 58 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 -- Generation 7 -- Evaluated 73 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 -- Generation 8 -- Evaluated 61 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 -- Generation 9 -- Evaluated 56 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 -- Generation 10 -- Evaluated 60 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 -- Generation 11 -- Evaluated 59 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 -- Generation 12 -- Evaluated 65 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 -- Generation 13 -- Evaluated 68 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 -- Generation 14 -- Evaluated 50 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 -- Generation 15 -- Evaluated 68 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 -- Generation 16 -- Evaluated 60 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 -- Generation 17 -- Evaluated 53 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 -- Generation 18 -- Evaluated 53 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 -- Generation 19 -- Evaluated 60 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_23.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_23_BRIAN2`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_23_BRIAN2`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_23_BRIAN2`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/4 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.01s, trying other methods took 0.03s). [brian2.stateupdaters.base.method_choice] IMPORTED MATPLOTLIB WITH AGG Initial Run MainProcess root INFO creating /tmp/brian_flag_test_39qbvtyr/tmp MainProcess root INFO creating /tmp/brian_flag_test_39qbvtyr/tmp/brian_flag_test_39qbvtyr MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_39qbvtyr/flag_test.cpp -o /tmp/brian_flag_test_39qbvtyr/tmp/brian_flag_test_39qbvtyr/flag_test.o -w WARNING Removing unsupported flag '-w' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_sz3jwo8i/tmp MainProcess root INFO creating /tmp/brian_flag_test_sz3jwo8i/tmp/brian_flag_test_sz3jwo8i MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_sz3jwo8i/flag_test.cpp -o /tmp/brian_flag_test_sz3jwo8i/tmp/brian_flag_test_sz3jwo8i/flag_test.o -O3 WARNING Removing unsupported flag '-O3' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_3su52f_x/tmp MainProcess root INFO creating /tmp/brian_flag_test_3su52f_x/tmp/brian_flag_test_3su52f_x MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_3su52f_x/flag_test.cpp -o /tmp/brian_flag_test_3su52f_x/tmp/brian_flag_test_3su52f_x/flag_test.o -ffast-math WARNING Removing unsupported flag '-ffast-math' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_qa4mgoew/tmp MainProcess root INFO creating /tmp/brian_flag_test_qa4mgoew/tmp/brian_flag_test_qa4mgoew MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_qa4mgoew/flag_test.cpp -o /tmp/brian_flag_test_qa4mgoew/tmp/brian_flag_test_qa4mgoew/flag_test.o -fno-finite-math-only WARNING Removing unsupported flag '-fno-finite-math-only' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_217llgmw/tmp MainProcess root INFO creating /tmp/brian_flag_test_217llgmw/tmp/brian_flag_test_217llgmw MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_217llgmw/flag_test.cpp -o /tmp/brian_flag_test_217llgmw/tmp/brian_flag_test_217llgmw/flag_test.o -march=native WARNING Removing unsupported flag '-march=native' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_ukq4wgl0/tmp MainProcess root INFO creating /tmp/brian_flag_test_ukq4wgl0/tmp/brian_flag_test_ukq4wgl0 MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_ukq4wgl0/flag_test.cpp -o /tmp/brian_flag_test_ukq4wgl0/tmp/brian_flag_test_ukq4wgl0/flag_test.o -std=c++11 WARNING Removing unsupported flag '-std=c++11' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO building '_cython_magic_9b752dab9b0cdfe4c7ee2667d1478da1' extension MainProcess root INFO creating /builddir/.cython/brian_extensions/builddir MainProcess root INFO creating /builddir/.cython/brian_extensions/builddir/.cython MainProcess root INFO creating /builddir/.cython/brian_extensions/builddir/.cython/brian_extensions MainProcess root INFO gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/include -I/usr/lib64/python3.13/site-packages/brian2/synapses -I/usr/include/python3.13 -c /builddir/.cython/brian_extensions/_cython_magic_9b752dab9b0cdfe4c7ee2667d1478da1.cpp -o /builddir/.cython/brian_extensions/builddir/.cython/brian_extensions/_cython_magic_9b752dab9b0cdfe4c7ee2667d1478da1.o WARNING Cannot use Cython, a test compilation failed: command 'gcc' failed: No such file or directory (CompileError) Certain compiler configurations (e.g. clang in a conda environment on OS X) are known to be problematic. Note that you can switch the compiler by setting the 'CC' and 'CXX' environment variables. For example, you may want to try 'CC=gcc' and 'CXX=g++'. [brian2.codegen.runtime.cython_rt.cython_rt.failed_compile_test] INFO Cannot use compiled code, falling back to the numpy code generation target. Note that this will likely be slower than using compiled code. Set the code generation to numpy manually to avoid this message: prefs.codegen.target = "numpy" [brian2.devices.device.codegen_fallback] Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #0 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/4 runs [===== ] 25.0%, remaining: 0:00:02 MainProcess pypet INFO ========================================= Starting single run #1 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.00s, trying other methods took 0.01s). [brian2.stateupdaters.base.method_choice] Initial Run Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #1 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/4 runs [========== ] 50.0%, remaining: 0:00:01 MainProcess pypet INFO ========================================= Starting single run #2 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.00s, trying other methods took 0.01s). [brian2.stateupdaters.base.method_choice] Initial Run Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #2 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/4 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.00s, trying other methods took 0.01s). [brian2.stateupdaters.base.method_choice] Initial Run Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #3 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/4 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_23_BRIAN2`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_23_BRIAN2`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_23_BRIAN2`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_23_BRIAN2` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_23_BRIAN2`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_23_BRIAN2`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_23_BRIAN2`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_23_BRIAN2` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Computing all patterns [====================]100.0%Plotting all patterns [====================]100.0%MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_17_wrapping_an_existing_project/experiments/ca_patterns_pypet/all_patterns.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess root INFO Starting Simulation MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `cellular_automata`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `cellular_automata`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `cellular_automata`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 4 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/10 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 1/10 runs [== ] 10.0%, remaining: 0:00:13 MainProcess pypet INFO PROGRESS: Finished 2/10 runs [==== ] 20.0%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 3/10 runs [====== ] 30.0%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 4/10 runs [======== ] 40.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 5/10 runs [========== ] 50.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 6/10 runs [============ ] 60.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 7/10 runs [============== ] 70.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 8/10 runs [================ ] 80.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 9/10 runs [================== ] 90.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 10/10 runs [====================]100.0% MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `cellular_automata`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `cellular_automata`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `cellular_automata` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `cellular_automata`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `cellular_automata`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `cellular_automata` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. MainProcess root INFO Printing data MainProcess root INFO [== ] 10.0% MainProcess root INFO [==== ] 20.0%, remaining: 0:00:00 MainProcess root INFO [====== ] 30.0%, remaining: 0:00:00 MainProcess root INFO [======== ] 40.0%, remaining: 0:00:00 MainProcess root INFO [========== ] 50.0%, remaining: 0:00:00 MainProcess root INFO [============ ] 60.0%, remaining: 0:00:00 MainProcess root INFO [============== ] 70.0%, remaining: 0:00:00 MainProcess root INFO [================ ] 80.0%, remaining: 0:00:00 MainProcess root INFO [================== ] 90.0%, remaining: 0:00:00 MainProcess root INFO [====================]100.0% MainProcess STDOUT INFO Established redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/FiringRate.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess STDOUT INFO Adding Parameters MainProcess STDOUT INFO Adding exploration of I and tau_ref MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `FiringRate`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 2 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/303 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 16/303 runs [= ] 5.3%, remaining: 0:00:06 MainProcess pypet INFO PROGRESS: Finished 31/303 runs [== ] 10.2%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 46/303 runs [=== ] 15.2%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 61/303 runs [==== ] 20.1%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 76/303 runs [===== ] 25.1%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 91/303 runs [====== ] 30.0%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 107/303 runs [======= ] 35.3%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 122/303 runs [======== ] 40.3%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 137/303 runs [========= ] 45.2%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 152/303 runs [========== ] 50.2%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 167/303 runs [=========== ] 55.1%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 182/303 runs [============ ] 60.1%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 197/303 runs [============= ] 65.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 213/303 runs [============== ] 70.3%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 228/303 runs [=============== ] 75.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 243/303 runs [================ ] 80.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 258/303 runs [================= ] 85.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 273/303 runs [================== ] 90.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 288/303 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 303/303 runs [====================]100.0% MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.Environment INFO Performing POSTPROCESSING MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `FiringRate`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `FiringRate` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `results`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/storageservice.py:4210: PerformanceWarning: your performance may suffer as PyTables will pickle object types that it cannot map directly to c-types [inferred_type->floating,key->block0_values] [items->Index([5.0, 7.5, 10.0], dtype='float64')] self._hdf5store.put(name, data, **kwargs) MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `FiringRate`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `FiringRate`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `FiringRate` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Disabled redirection of `stdout`. IMPORTED MATPLOTLIB WITH AGG MainProcess STDOUT INFO Established redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/FiringRate.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO You specified ``overwrite_file=True``, so I deleted the file `hdf5/FiringRate.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess STDOUT INFO Adding Parameters MainProcess STDOUT INFO Adding exploration of I and tau_ref MainProcess pypet.environment.Environment INFO ************************************************************ STARTING PPREPROCESSING for trajectory `FiringRatePipeline` ************************************************************ MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `FiringRatePipeline`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 2 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/303 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 16/303 runs [= ] 5.3%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 31/303 runs [== ] 10.2%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 46/303 runs [=== ] 15.2%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 61/303 runs [==== ] 20.1%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 76/303 runs [===== ] 25.1%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 91/303 runs [====== ] 30.0%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 107/303 runs [======= ] 35.3%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 122/303 runs [======== ] 40.3%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 137/303 runs [========= ] 45.2%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 152/303 runs [========== ] 50.2%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 167/303 runs [=========== ] 55.1%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 182/303 runs [============ ] 60.1%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 197/303 runs [============= ] 65.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 213/303 runs [============== ] 70.3%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 228/303 runs [=============== ] 75.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 243/303 runs [================ ] 80.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 258/303 runs [================= ] 85.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 273/303 runs [================== ] 90.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 288/303 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 303/303 runs [====================]100.0% MainProcess pypet.environment.Environment INFO Performing POSTPROCESSING MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `FiringRatePipeline`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `FiringRatePipeline` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `results`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/storageservice.py:4210: PerformanceWarning: your performance may suffer as PyTables will pickle object types that it cannot map directly to c-types [inferred_type->floating,key->block0_values] [items->Index([5.0, 7.5, 10.0], dtype='float64')] self._hdf5store.put(name, data, **kwargs) MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `FiringRatePipeline`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `FiringRatePipeline` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Disabled redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/Clustered_Network.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.brian2.network.NetworkManager INFO Adding Parameters of Components MainProcess pypet.brian2.network.NetworkManager INFO Adding Parameters of Analysers MainProcess pypet.brian2.network.NetworkManager INFO Adding Parameters of Runner MainProcess pypet.brian2.network.NetworkManager INFO Pre-Building Components MainProcess pypet.brian2.network.NetworkManager INFO Pre-Building Analysers MainProcess pypet.brian2.network.NetworkManager INFO Pre-Building NetworkRunner MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Clustered_Network`. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Clustered_Network`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Clustered_Network`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Clustered_Network`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 4 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/7 runs [ ] 0.0% Connecting ii Connecting ei Connecting ie Connectiong ee Starting simulation at t=0. s for a duration of 0.5 s 0.5 s (100%) simulated in 1s Starting simulation at t=0.5 s for a duration of 1.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s 1.5 s (100%) simulated in 5s 0.5 s (100%) simulated in 4s 0.5 s (100%) simulated in 3s 0.5 s (100%) simulated in 4s Starting simulation at t=0.5 s for a duration of 1.5 s Starting simulation at t=0.5 s for a duration of 1.5 s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/I_syn_i.png R_ee: 1.000000, Mean FF: 0.481345 MainProcess pypet INFO PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:57 Starting simulation at t=0.5 s for a duration of 1.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s 0.5 s (100%) simulated in 4s Starting simulation at t=0.5 s for a duration of 1.5 s 1.0191 s (67%) simulated in 10s, estimated 5s remaining. 1.07 s (71%) simulated in 10s, estimated 4s remaining. 1.0306 s (68%) simulated in 10s, estimated 5s remaining. 1.5 s (100%) simulated in 14s 1.5 s (100%) simulated in 14s 1.5 s (100%) simulated in 14s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/I_syn_i.png R_ee: 1.800000, Mean FF: 0.501815 MainProcess pypet INFO PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:01:03 Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/I_syn_i.png R_ee: 1.400000, Mean FF: 0.495129 MainProcess pypet INFO PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:34 Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/I_syn_i.png R_ee: 2.200000, Mean FF: 0.514965 MainProcess pypet INFO PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:19 Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s 1.0797 s (71%) simulated in 10s, estimated 4s remaining. Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s 0.5 s (100%) simulated in 2s Starting simulation at t=0.5 s for a duration of 1.5 s 1.5 s (100%) simulated in 13s 0.5 s (100%) simulated in 4s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/I_syn_i.png R_ee: 2.600000, Mean FF: 0.557292 MainProcess pypet INFO PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:13 Starting simulation at t=0.5 s for a duration of 1.5 s 1.5 s (100%) simulated in 8s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/I_syn_i.png R_ee: 3.400000, Mean FF: 0.145040 MainProcess pypet INFO PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:06 1.5 s (100%) simulated in 7s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/I_syn_i.png R_ee: 3.000000, Mean FF: 0.388610 MainProcess pypet INFO PROGRESS: Finished 7/7 runs [====================]100.0% MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Clustered_Network`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Clustered_Network`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Clustered_Network` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Clustered_Network`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Clustered_Network`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Clustered_Network` were completed successfully. MainProcess pypet.environment.Environment INFO Found storage service attached to Trajectory. Will use this storage service. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. IMPORTED MATPLOTLIB WITH AGG *** Running under Linux *** ----- I will skip the following tests: `{'21'}` ---- ########## Running __init__.py ########### #### Example successful #### ########## Running example_01_first_steps.py ########### #### Example successful #### ########## Running example_02_trajectory_access_and_storage.py ########### #### Example successful #### ########## Running example_03_trajectory_merging.py ########### #### Example successful #### ########## Running example_04_multiprocessing.py ########### #### Example successful #### ########## Running example_05_custom_parameter.py ########### #### Example successful #### ########## Running example_06_parameter_presetting.py ########### #### Example successful #### ########## Running example_08_f_find_idx.py ########### #### Example successful #### ########## Running example_09_large_results.py ########### #### Example successful #### ########## Running example_10_get_items_from_all_runs.py ########### #### Example successful #### ########## Running example_12_sharing_data_between_processes.py ########### #### Example successful #### ########## Running example_14_links.py ########### #### Example successful #### ########## Running example_15_more_ways_to_add_data.py ########### #### Example successful #### ########## Running example_16_multiproc_context.py ########### #### Example successful #### ########## Running example_18_many_runs.py ########### #### Example successful #### ########## Running example_19_using_deap.py ########### #### Example successful #### ########## Running example_19b_using_deap_less_overhead.py ########### #### Example successful #### ########## Running example_19c_using_deap_with_post_processing.py ########### #### Example successful #### ########## Running example_20_using_deap_manual_runs.py ########### #### Example successful #### ---------- Skipping example_21_scoop_multiprocessing.py ---------- ########## Running example_23_brian2_network.py ########### #### Example successful #### Running original #### Example successful #### Running pypet wrapping #### Example successful #### ########## Running example_13_post_processing ########### Running main #### Example successful #### Running analysis #### Example successful #### Running pipeline #### Example successful #### ########## Running example_24_large_scale_brian2_simulation ########### Running script #### Example successful #### Running analysis #### Example successful #### ~/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 + popd + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pypet-0.6.1-7.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.3jJRez + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + DOCDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python3-pypet + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python3-pypet + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/README.md /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python3-pypet + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pypet = 0.6.1-7.fc41 python3-pypet = 0.6.1-7.fc41 python3.13-pypet = 0.6.1-7.fc41 python3.13dist(pypet) = 0.6.1 python3dist(pypet) = 0.6.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(numpy) python3.13dist(pandas) python3.13dist(scipy) python3.13dist(tables) Processing files: python-pypet-doc-0.6.1-7.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.9ZCrNh + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + DOCDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/CHANGES.txt /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/_clean/examples /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/build/latex/pypet.pdf /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.69Rg1Z + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + LICENSEDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/licenses/python-pypet-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/licenses/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/LICENSE /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/licenses/python-pypet-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pypet-doc = 0.6.1-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-7.fc41.src.rpm Wrote: /builddir/build/RPMS/python-pypet-doc-0.6.1-7.fc41.noarch.rpm Wrote: /builddir/build/RPMS/python3-pypet-0.6.1-7.fc41.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.gNleor + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + test -d /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pypet-0.6.1-build + rm -rf /builddir/build/BUILD/python-pypet-0.6.1-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-pypet-0.6.1-7.fc41.src.rpm Finish: build phase for python-pypet-0.6.1-7.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1736345385.282830/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/python-pypet-0.6.1-7.fc41.src.rpm) Config(child) 15 minutes 20 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python3-pypet", "epoch": null, "version": "0.6.1", "release": "7.fc41", "arch": "noarch" }, { "name": "python-pypet-doc", "epoch": null, "version": "0.6.1", "release": "7.fc41", "arch": "noarch" }, { "name": "python-pypet", "epoch": null, "version": "0.6.1", "release": "7.fc41", "arch": "src" } ] } RPMResults finished