Warning: Permanently added '98.92.228.77' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/9743705-fedora-41-x86_64 --chroot fedora-41-x86_64


Version: 1.6
PID: 8713
Logging PID: 8715
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': False,
 'build_id': 9743705,
 'buildroot_pkgs': [],
 'chroot': 'fedora-41-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': 'd995307458d49daf756ea23f8bc1faf60e50c834',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/davidsch/bout3d/bout++',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'bout++',
 'package_version': '5.2.0-1',
 'project_dirname': 'bout3d',
 'project_name': 'bout3d',
 'project_owner': 'davidsch',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/davidsch/bout3d/fedora-41-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'davidsch/bout3d--davidsch',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'storage': 0,
 'submitter': 'davidsch',
 'tags': [],
 'task_id': '9743705-fedora-41-x86_64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/davidsch/bout3d/bout++ /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++ --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/davidsch/bout3d/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++'...

Running: git checkout d995307458d49daf756ea23f8bc1faf60e50c834 --

cmd: ['git', 'checkout', 'd995307458d49daf756ea23f8bc1faf60e50c834', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++
rc: 0
stdout: 
stderr: Note: switching to 'd995307458d49daf756ea23f8bc1faf60e50c834'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at d995307 automatic import of bout++

Running: dist-git-client sources

cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading BOUT++-v5.2.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o BOUT++-v5.2.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/davidsch/bout3d/bout++/BOUT++-v5.2.0.tar.gz/md5/a12adf302b00dbb7d05e4c71cb47c17e/BOUT++-v5.2.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 14.3M  100 14.3M    0     0   391M      0 --:--:-- --:--:-- --:--:--  399M
INFO: Reading stdout from command: md5sum BOUT++-v5.2.0.tar.gz

tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1761740611.709676 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 6.5 starting (python version = 3.13.7, NVR = mock-6.5-1.fc42), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1761740611.709676 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++/bout++.spec)  Config(fedora-41-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 6.5
INFO: Mock Version: 6.5
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1761740611.709676/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using container image: registry.fedoraproject.org/fedora:41
INFO: Pulling image: registry.fedoraproject.org/fedora:41
INFO: Tagging container image as mock-bootstrap-83280c6b-00c4-4209-8007-e8080d617009
INFO: Checking that 5c8848000efe33bfde066dbf125ea795b4bd41e53de475e8dc6aa13ecb444a3b image matches host's architecture
INFO: Copy content of container 5c8848000efe33bfde066dbf125ea795b4bd41e53de475e8dc6aa13ecb444a3b to /var/lib/mock/fedora-41-x86_64-bootstrap-1761740611.709676/root
INFO: mounting 5c8848000efe33bfde066dbf125ea795b4bd41e53de475e8dc6aa13ecb444a3b with podman image mount
INFO: image 5c8848000efe33bfde066dbf125ea795b4bd41e53de475e8dc6aa13ecb444a3b as /var/lib/containers/storage/overlay/308cc2bfb0bde3fa36fbbda5bb30473d3169c04597c3cd9cb899c4f7aaa657e8/merged
INFO: umounting image 5c8848000efe33bfde066dbf125ea795b4bd41e53de475e8dc6aa13ecb444a3b (/var/lib/containers/storage/overlay/308cc2bfb0bde3fa36fbbda5bb30473d3169c04597c3cd9cb899c4f7aaa657e8/merged) with podman image umount
INFO: Removing image mock-bootstrap-83280c6b-00c4-4209-8007-e8080d617009
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1761740611.709676/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-4.20.1-1.fc41.x86_64
  rpm-sequoia-1.7.0-5.fc41.x86_64
  dnf5-5.2.16.0-1.fc41.x86_64
  dnf5-plugins-5.2.16.0-1.fc41.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 Copr repository                        100% |  35.8 KiB/s |   5.9 KiB |  00m00s
 updates                                100% |  11.4 MiB/s |  12.5 MiB |  00m01s
 fedora                                 100% |  30.3 MiB/s |  37.2 MiB |  00m01s
Repositories loaded.
Package                            Arch   Version                     Repository      Size
Installing group/module packages:
 bash                              x86_64 5.2.32-1.fc41               fedora       8.2 MiB
 bzip2                             x86_64 1.0.8-19.fc41               fedora      95.7 KiB
 coreutils                         x86_64 9.5-12.fc41                 updates      5.5 MiB
 cpio                              x86_64 2.15-2.fc41                 fedora       1.1 MiB
 diffutils                         x86_64 3.10-8.fc41                 fedora       1.6 MiB
 fedora-release-common             noarch 41-33                       updates     19.7 KiB
 findutils                         x86_64 1:4.10.0-4.fc41             fedora       1.8 MiB
 gawk                              x86_64 5.3.0-4.fc41                fedora       1.7 MiB
 glibc-minimal-langpack            x86_64 2.40-28.fc41                updates      0.0   B
 grep                              x86_64 3.11-9.fc41                 fedora       1.0 MiB
 gzip                              x86_64 1.13-2.fc41                 fedora     389.0 KiB
 info                              x86_64 7.1.1-1.fc41                updates    361.7 KiB
 patch                             x86_64 2.7.6-25.fc41               fedora     266.7 KiB
 redhat-rpm-config                 noarch 294-1.fc41                  updates    183.6 KiB
 rpm-build                         x86_64 4.20.1-1.fc41               updates    193.8 KiB
 sed                               x86_64 4.9-3.fc41                  fedora     861.5 KiB
 shadow-utils                      x86_64 2:4.15.1-12.fc41            fedora       4.1 MiB
 tar                               x86_64 2:1.35-4.fc41               fedora       2.9 MiB
 unzip                             x86_64 6.0-64.fc41                 fedora     386.8 KiB
 util-linux                        x86_64 2.40.4-1.fc41               updates      3.6 MiB
 which                             x86_64 2.21-42.fc41                fedora      80.2 KiB
 xz                                x86_64 1:5.8.1-2.fc41              updates      1.3 MiB
Installing dependencies:
 add-determinism                   x86_64 0.3.6-3.fc41                updates      2.4 MiB
 alternatives                      x86_64 1.31-1.fc41                 updates     64.8 KiB
 ansible-srpm-macros               noarch 1-16.fc41                   fedora      35.7 KiB
 audit-libs                        x86_64 4.1.1-1.fc41                updates    387.1 KiB
 authselect                        x86_64 1.5.0-8.fc41                fedora     157.6 KiB
 authselect-libs                   x86_64 1.5.0-8.fc41                fedora     822.2 KiB
 basesystem                        noarch 11-21.fc41                  fedora       0.0   B
 binutils                          x86_64 2.43.1-8.fc41               updates     27.5 MiB
 build-reproducibility-srpm-macros noarch 0.3.6-3.fc41                updates    735.0   B
 bzip2-libs                        x86_64 1.0.8-19.fc41               fedora      80.7 KiB
 ca-certificates                   noarch 2024.2.69_v8.0.401-1.0.fc41 fedora       2.4 MiB
 coreutils-common                  x86_64 9.5-12.fc41                 updates     11.2 MiB
 cracklib                          x86_64 2.9.11-6.fc41               fedora     238.9 KiB
 crypto-policies                   noarch 20250707-1.git836bbee.fc41  updates    143.8 KiB
 curl                              x86_64 8.9.1-4.fc41                updates    796.2 KiB
 cyrus-sasl-lib                    x86_64 2.1.28-27.fc41              fedora       2.3 MiB
 debugedit                         x86_64 5.1-6.fc41                  updates    200.9 KiB
 dwz                               x86_64 0.15-8.fc41                 fedora     298.9 KiB
 ed                                x86_64 1.20.2-2.fc41               fedora     146.9 KiB
 efi-srpm-macros                   noarch 5-13.fc41                   updates     40.2 KiB
 elfutils                          x86_64 0.193-2.fc41                updates      3.0 MiB
 elfutils-debuginfod-client        x86_64 0.193-2.fc41                updates     84.1 KiB
 elfutils-default-yama-scope       noarch 0.193-2.fc41                updates      1.8 KiB
 elfutils-libelf                   x86_64 0.193-2.fc41                updates      1.2 MiB
 elfutils-libs                     x86_64 0.193-2.fc41                updates    686.6 KiB
 fedora-gpg-keys                   noarch 41-3                        updates    128.2 KiB
 fedora-release                    noarch 41-33                       updates      0.0   B
 fedora-release-identity-basic     noarch 41-33                       updates    654.0   B
 fedora-repos                      noarch 41-3                        updates      4.9 KiB
 file                              x86_64 5.45-7.fc41                 fedora     103.5 KiB
 file-libs                         x86_64 5.45-7.fc41                 fedora       9.9 MiB
 filesystem                        x86_64 3.18-23.fc41                fedora     106.0   B
 fonts-srpm-macros                 noarch 1:2.0.5-17.fc41             fedora      55.8 KiB
 forge-srpm-macros                 noarch 0.4.0-1.fc41                updates     38.9 KiB
 fpc-srpm-macros                   noarch 1.3-13.fc41                 fedora     144.0   B
 gdb-minimal                       x86_64 16.3-1.fc41                 updates     13.3 MiB
 gdbm                              x86_64 1:1.23-7.fc41               fedora     460.9 KiB
 gdbm-libs                         x86_64 1:1.23-7.fc41               fedora     121.9 KiB
 ghc-srpm-macros                   noarch 1.9.1-2.fc41                fedora     747.0   B
 glibc                             x86_64 2.40-28.fc41                updates      6.7 MiB
 glibc-common                      x86_64 2.40-28.fc41                updates      1.0 MiB
 glibc-gconv-extra                 x86_64 2.40-28.fc41                updates      8.0 MiB
 gmp                               x86_64 1:6.3.0-2.fc41              fedora     811.4 KiB
 gnat-srpm-macros                  noarch 6-6.fc41                    fedora       1.0 KiB
 go-srpm-macros                    noarch 3.8.0-1.fc41                updates     61.9 KiB
 jansson                           x86_64 2.13.1-10.fc41              fedora      88.3 KiB
 json-c                            x86_64 0.17-4.fc41                 fedora      82.4 KiB
 kernel-srpm-macros                noarch 1.0-24.fc41                 fedora       1.9 KiB
 keyutils-libs                     x86_64 1.6.3-4.fc41                fedora      54.4 KiB
 krb5-libs                         x86_64 1.21.3-5.fc41               updates      2.3 MiB
 libacl                            x86_64 2.3.2-2.fc41                fedora      40.0 KiB
 libarchive                        x86_64 3.7.4-4.fc41                updates    926.6 KiB
 libattr                           x86_64 2.5.2-4.fc41                fedora      28.5 KiB
 libblkid                          x86_64 2.40.4-1.fc41               updates    257.2 KiB
 libbrotli                         x86_64 1.1.0-5.fc41                fedora     837.6 KiB
 libcap                            x86_64 2.70-4.fc41                 fedora     220.2 KiB
 libcap-ng                         x86_64 0.8.5-3.fc41                fedora      69.2 KiB
 libcom_err                        x86_64 1.47.1-6.fc41               fedora      67.2 KiB
 libcurl                           x86_64 8.9.1-4.fc41                updates    822.1 KiB
 libeconf                          x86_64 0.6.2-3.fc41                fedora      58.0 KiB
 libevent                          x86_64 2.1.12-14.fc41              fedora     895.7 KiB
 libfdisk                          x86_64 2.40.4-1.fc41               updates    356.4 KiB
 libffi                            x86_64 3.4.6-3.fc41                fedora      86.4 KiB
 libgcc                            x86_64 14.3.1-4.fc41               updates    274.6 KiB
 libgomp                           x86_64 14.3.1-4.fc41               updates    523.6 KiB
 libidn2                           x86_64 2.3.8-1.fc41                updates    556.6 KiB
 libmount                          x86_64 2.40.4-1.fc41               updates    348.8 KiB
 libnghttp2                        x86_64 1.62.1-3.fc41               updates    174.1 KiB
 libnsl2                           x86_64 2.0.1-2.fc41                fedora      57.9 KiB
 libpkgconf                        x86_64 2.3.0-1.fc41                fedora      78.2 KiB
 libpsl                            x86_64 0.21.5-4.fc41               fedora      80.5 KiB
 libpwquality                      x86_64 1.4.5-11.fc41               fedora     417.8 KiB
 libselinux                        x86_64 3.7-5.fc41                  fedora     181.0 KiB
 libsemanage                       x86_64 3.7-2.fc41                  fedora     293.5 KiB
 libsepol                          x86_64 3.7-2.fc41                  fedora     817.8 KiB
 libsmartcols                      x86_64 2.40.4-1.fc41               updates    176.2 KiB
 libssh                            x86_64 0.11.3-1.fc41               updates    571.2 KiB
 libssh-config                     noarch 0.11.3-1.fc41               updates    277.0   B
 libstdc++                         x86_64 14.3.1-4.fc41               updates      2.8 MiB
 libtasn1                          x86_64 4.20.0-1.fc41               updates    180.4 KiB
 libtirpc                          x86_64 1.3.6-1.rc3.fc41            updates    197.6 KiB
 libtool-ltdl                      x86_64 2.4.7-12.fc41               fedora      66.2 KiB
 libunistring                      x86_64 1.1-8.fc41                  fedora       1.7 MiB
 libutempter                       x86_64 1.2.1-15.fc41               fedora      57.7 KiB
 libuuid                           x86_64 2.40.4-1.fc41               updates     39.9 KiB
 libverto                          x86_64 0.3.2-9.fc41                fedora      29.5 KiB
 libxcrypt                         x86_64 4.4.38-7.fc41               updates    288.5 KiB
 libxml2                           x86_64 2.12.10-1.fc41              updates      1.7 MiB
 libzstd                           x86_64 1.5.7-1.fc41                updates    804.0 KiB
 lua-libs                          x86_64 5.4.8-1.fc41                updates    285.0 KiB
 lua-srpm-macros                   noarch 1-14.fc41                   fedora       1.3 KiB
 lz4-libs                          x86_64 1.10.0-1.fc41               fedora     145.5 KiB
 mpfr                              x86_64 4.2.1-5.fc41                fedora     832.1 KiB
 ncurses-base                      noarch 6.5-2.20240629.fc41         fedora     326.3 KiB
 ncurses-libs                      x86_64 6.5-2.20240629.fc41         fedora     975.2 KiB
 ocaml-srpm-macros                 noarch 10-3.fc41                   fedora       1.9 KiB
 openblas-srpm-macros              noarch 2-18.fc41                   fedora     112.0   B
 openldap                          x86_64 2.6.10-1.fc41               updates    646.0 KiB
 openssl-libs                      x86_64 1:3.2.6-2.fc41              updates      7.8 MiB
 p11-kit                           x86_64 0.25.5-4.fc41               updates      2.2 MiB
 p11-kit-trust                     x86_64 0.25.5-4.fc41               updates    395.4 KiB
 package-notes-srpm-macros         noarch 0.5-12.fc41                 fedora       1.6 KiB
 pam                               x86_64 1.6.1-8.fc41                updates      1.8 MiB
 pam-libs                          x86_64 1.6.1-8.fc41                updates    139.0 KiB
 pcre2                             x86_64 10.44-1.fc41.1              fedora     653.5 KiB
 pcre2-syntax                      noarch 10.44-1.fc41.1              fedora     251.6 KiB
 perl-srpm-macros                  noarch 1-56.fc41                   fedora     861.0   B
 pkgconf                           x86_64 2.3.0-1.fc41                fedora      88.6 KiB
 pkgconf-m4                        noarch 2.3.0-1.fc41                fedora      14.4 KiB
 pkgconf-pkg-config                x86_64 2.3.0-1.fc41                fedora     989.0   B
 popt                              x86_64 1.19-7.fc41                 fedora     136.9 KiB
 publicsuffix-list-dafsa           noarch 20250616-1.fc41             updates     69.1 KiB
 pyproject-srpm-macros             noarch 1.18.4-1.fc41               updates      1.9 KiB
 python-srpm-macros                noarch 3.13-5.fc41                 updates     51.0 KiB
 qt5-srpm-macros                   noarch 5.15.17-1.fc41              updates    500.0   B
 qt6-srpm-macros                   noarch 6.8.3-1.fc41                updates    456.0   B
 readline                          x86_64 8.2-10.fc41                 fedora     493.2 KiB
 rpm                               x86_64 4.20.1-1.fc41               updates      3.1 MiB
 rpm-build-libs                    x86_64 4.20.1-1.fc41               updates    210.7 KiB
 rpm-libs                          x86_64 4.20.1-1.fc41               updates    730.0 KiB
 rpm-sequoia                       x86_64 1.7.0-5.fc41                updates      2.4 MiB
 rust-srpm-macros                  noarch 26.4-1.fc41                 updates      4.8 KiB
 setup                             noarch 2.15.0-8.fc41               updates    720.7 KiB
 sqlite-libs                       x86_64 3.46.1-5.fc41               updates      1.5 MiB
 systemd-libs                      x86_64 256.17-1.fc41               updates      2.0 MiB
 util-linux-core                   x86_64 2.40.4-1.fc41               updates      1.5 MiB
 xxhash-libs                       x86_64 0.8.3-1.fc41                updates     88.5 KiB
 xz-libs                           x86_64 1:5.8.1-2.fc41              updates    217.9 KiB
 zig-srpm-macros                   noarch 1-3.fc41                    fedora       1.1 KiB
 zip                               x86_64 3.0-41.fc41                 fedora     703.2 KiB
 zlib-ng-compat                    x86_64 2.2.3-2.fc41                updates    141.9 KiB
 zstd                              x86_64 1.5.7-1.fc41                updates      1.7 MiB
Installing groups:
 Buildsystem building group                                                               

Transaction Summary:
 Installing:       154 packages

Total size of inbound packages is 53 MiB. Need to download 53 MiB.
After this operation, 182 MiB extra will be used (install 182 MiB, remove 0 B).
[  1/154] bzip2-0:1.0.8-19.fc41.x86_64  100% |   3.9 MiB/s |  52.5 KiB |  00m00s
[  2/154] cpio-0:2.15-2.fc41.x86_64     100% |  16.8 MiB/s | 291.8 KiB |  00m00s
[  3/154] bash-0:5.2.32-1.fc41.x86_64   100% |  86.0 MiB/s |   1.8 MiB |  00m00s
[  4/154] diffutils-0:3.10-8.fc41.x86_6 100% |  49.5 MiB/s | 405.4 KiB |  00m00s
[  5/154] findutils-1:4.10.0-4.fc41.x86 100% | 107.1 MiB/s | 548.5 KiB |  00m00s
[  6/154] gzip-0:1.13-2.fc41.x86_64     100% |  55.4 MiB/s | 170.2 KiB |  00m00s
[  7/154] grep-0:3.11-9.fc41.x86_64     100% |  58.5 MiB/s | 299.7 KiB |  00m00s
[  8/154] patch-0:2.7.6-25.fc41.x86_64  100% |  32.0 MiB/s | 131.0 KiB |  00m00s
[  9/154] tar-2:1.35-4.fc41.x86_64      100% | 105.1 MiB/s | 860.7 KiB |  00m00s
[ 10/154] shadow-utils-2:4.15.1-12.fc41 100% | 132.0 MiB/s |   1.3 MiB |  00m00s
[ 11/154] sed-0:4.9-3.fc41.x86_64       100% |  25.9 MiB/s | 317.7 KiB |  00m00s
[ 12/154] unzip-0:6.0-64.fc41.x86_64    100% |  60.2 MiB/s | 184.9 KiB |  00m00s
[ 13/154] which-0:2.21-42.fc41.x86_64   100% |  13.5 MiB/s |  41.6 KiB |  00m00s
[ 14/154] fedora-release-common-0:41-33 100% |  11.3 MiB/s |  23.2 KiB |  00m00s
[ 15/154] coreutils-0:9.5-12.fc41.x86_6 100% | 155.3 MiB/s |   1.1 MiB |  00m00s
[ 16/154] glibc-minimal-langpack-0:2.40 100% |  17.3 MiB/s |  70.9 KiB |  00m00s
[ 17/154] gawk-0:5.3.0-4.fc41.x86_64    100% | 153.0 MiB/s |   1.1 MiB |  00m00s
[ 18/154] redhat-rpm-config-0:294-1.fc4 100% |  38.6 MiB/s |  79.0 KiB |  00m00s
[ 19/154] info-0:7.1.1-1.fc41.x86_64    100% |  44.4 MiB/s | 182.0 KiB |  00m00s
[ 20/154] rpm-build-0:4.20.1-1.fc41.x86 100% |  15.9 MiB/s |  81.5 KiB |  00m00s
[ 21/154] xz-1:5.8.1-2.fc41.x86_64      100% |  55.9 MiB/s | 572.9 KiB |  00m00s
[ 22/154] util-linux-0:2.40.4-1.fc41.x8 100% |  90.4 MiB/s |   1.1 MiB |  00m00s
[ 23/154] bzip2-libs-0:1.0.8-19.fc41.x8 100% |   6.7 MiB/s |  41.1 KiB |  00m00s
[ 24/154] ncurses-libs-0:6.5-2.20240629 100% |  36.2 MiB/s | 334.0 KiB |  00m00s
[ 25/154] libselinux-0:3.7-5.fc41.x86_6 100% |  28.6 MiB/s |  87.8 KiB |  00m00s
[ 26/154] pcre2-0:10.44-1.fc41.1.x86_64 100% |  59.4 MiB/s | 243.1 KiB |  00m00s
[ 27/154] filesystem-0:3.18-23.fc41.x86 100% |  49.4 MiB/s |   1.1 MiB |  00m00s
[ 28/154] libattr-0:2.5.2-4.fc41.x86_64 100% |   4.4 MiB/s |  18.2 KiB |  00m00s
[ 29/154] ed-0:1.20.2-2.fc41.x86_64     100% |  13.3 MiB/s |  81.8 KiB |  00m00s
[ 30/154] libacl-0:2.3.2-2.fc41.x86_64  100% |   8.0 MiB/s |  24.5 KiB |  00m00s
[ 31/154] libeconf-0:0.6.2-3.fc41.x86_6 100% |  10.5 MiB/s |  32.2 KiB |  00m00s
[ 32/154] libsemanage-0:3.7-2.fc41.x86_ 100% |  37.9 MiB/s | 116.3 KiB |  00m00s
[ 33/154] libcap-0:2.70-4.fc41.x86_64   100% |  42.3 MiB/s |  86.7 KiB |  00m00s
[ 34/154] gmp-1:6.3.0-2.fc41.x86_64     100% |  77.6 MiB/s | 318.0 KiB |  00m00s
[ 35/154] mpfr-0:4.2.1-5.fc41.x86_64    100% |  67.6 MiB/s | 346.3 KiB |  00m00s
[ 36/154] coreutils-common-0:9.5-12.fc4 100% | 174.3 MiB/s |   2.1 MiB |  00m00s
[ 37/154] readline-0:8.2-10.fc41.x86_64 100% |  29.7 MiB/s | 213.2 KiB |  00m00s
[ 38/154] glibc-common-0:2.40-28.fc41.x 100% |  87.7 MiB/s | 359.4 KiB |  00m00s
[ 39/154] ansible-srpm-macros-0:1-16.fc 100% |  10.1 MiB/s |  20.8 KiB |  00m00s
[ 40/154] dwz-0:0.15-8.fc41.x86_64      100% |  67.8 MiB/s | 138.9 KiB |  00m00s
[ 41/154] file-0:5.45-7.fc41.x86_64     100% |  16.0 MiB/s |  49.1 KiB |  00m00s
[ 42/154] fonts-srpm-macros-1:2.0.5-17. 100% |   8.8 MiB/s |  27.0 KiB |  00m00s
[ 43/154] fpc-srpm-macros-0:1.3-13.fc41 100% |   3.9 MiB/s |   8.0 KiB |  00m00s
[ 44/154] ghc-srpm-macros-0:1.9.1-2.fc4 100% |   8.8 MiB/s |   9.1 KiB |  00m00s
[ 45/154] gnat-srpm-macros-0:6-6.fc41.n 100% |   2.9 MiB/s |   9.0 KiB |  00m00s
[ 46/154] kernel-srpm-macros-0:1.0-24.f 100% |   3.2 MiB/s |   9.9 KiB |  00m00s
[ 47/154] lua-srpm-macros-0:1-14.fc41.n 100% |   2.9 MiB/s |   8.9 KiB |  00m00s
[ 48/154] ocaml-srpm-macros-0:10-3.fc41 100% |   4.5 MiB/s |   9.2 KiB |  00m00s
[ 49/154] openblas-srpm-macros-0:2-18.f 100% |   7.5 MiB/s |   7.7 KiB |  00m00s
[ 50/154] package-notes-srpm-macros-0:0 100% |   9.6 MiB/s |   9.8 KiB |  00m00s
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[ 52/154] zig-srpm-macros-0:1-3.fc41.no 100% |   7.9 MiB/s |   8.1 KiB |  00m00s
[ 53/154] zip-0:3.0-41.fc41.x86_64      100% | 129.3 MiB/s | 264.8 KiB |  00m00s
[ 54/154] popt-0:1.19-7.fc41.x86_64     100% |  21.5 MiB/s |  65.9 KiB |  00m00s
[ 55/154] rpm-0:4.20.1-1.fc41.x86_64    100% | 107.4 MiB/s | 549.6 KiB |  00m00s
[ 56/154] util-linux-core-0:2.40.4-1.fc 100% |  96.1 MiB/s | 492.2 KiB |  00m00s
[ 57/154] libcap-ng-0:0.8.5-3.fc41.x86_ 100% |   7.9 MiB/s |  32.6 KiB |  00m00s
[ 58/154] libutempter-0:1.2.1-15.fc41.x 100% |   8.7 MiB/s |  26.6 KiB |  00m00s
[ 59/154] xz-libs-1:5.8.1-2.fc41.x86_64 100% |  36.6 MiB/s | 112.4 KiB |  00m00s
[ 60/154] ncurses-base-0:6.5-2.20240629 100% |  43.1 MiB/s |  88.3 KiB |  00m00s
[ 61/154] libsepol-0:3.7-2.fc41.x86_64  100% | 111.4 MiB/s | 342.2 KiB |  00m00s
[ 62/154] file-libs-0:5.45-7.fc41.x86_6 100% | 148.8 MiB/s | 762.0 KiB |  00m00s
[ 63/154] pcre2-syntax-0:10.44-1.fc41.1 100% |  10.5 MiB/s | 149.9 KiB |  00m00s
[ 64/154] glibc-0:2.40-28.fc41.x86_64   100% | 129.0 MiB/s |   2.2 MiB |  00m00s
[ 65/154] glibc-gconv-extra-0:2.40-28.f 100% | 109.6 MiB/s |   1.6 MiB |  00m00s
[ 66/154] basesystem-0:11-21.fc41.noarc 100% |   1.0 MiB/s |   7.4 KiB |  00m00s
[ 67/154] rpm-libs-0:4.20.1-1.fc41.x86_ 100% | 101.6 MiB/s | 312.0 KiB |  00m00s
[ 68/154] rpm-build-libs-0:4.20.1-1.fc4 100% |  48.2 MiB/s |  98.8 KiB |  00m00s
[ 69/154] audit-libs-0:4.1.1-1.fc41.x86 100% |  45.3 MiB/s | 139.1 KiB |  00m00s
[ 70/154] libxcrypt-0:4.4.38-7.fc41.x86 100% |  62.3 MiB/s | 127.5 KiB |  00m00s
[ 71/154] pam-libs-0:1.6.1-8.fc41.x86_6 100% |  27.6 MiB/s |  56.5 KiB |  00m00s
[ 72/154] setup-0:2.15.0-8.fc41.noarch  100% |  50.3 MiB/s | 154.6 KiB |  00m00s
[ 73/154] libgcc-0:14.3.1-4.fc41.x86_64 100% |  47.4 MiB/s | 145.5 KiB |  00m00s
[ 74/154] forge-srpm-macros-0:0.4.0-1.f 100% |   9.6 MiB/s |  19.7 KiB |  00m00s
[ 75/154] zlib-ng-compat-0:2.2.3-2.fc41 100% |  38.5 MiB/s |  78.9 KiB |  00m00s
[ 76/154] elfutils-libelf-0:0.193-2.fc4 100% |  67.6 MiB/s | 207.5 KiB |  00m00s
[ 77/154] elfutils-libs-0:0.193-2.fc41. 100% |  87.2 MiB/s | 268.0 KiB |  00m00s
[ 78/154] elfutils-debuginfod-client-0: 100% |  22.9 MiB/s |  47.0 KiB |  00m00s
[ 79/154] json-c-0:0.17-4.fc41.x86_64   100% |  14.3 MiB/s |  44.0 KiB |  00m00s
[ 80/154] libuuid-0:2.40.4-1.fc41.x86_6 100% |  13.2 MiB/s |  27.1 KiB |  00m00s
[ 81/154] libblkid-0:2.40.4-1.fc41.x86_ 100% |  29.1 MiB/s | 119.2 KiB |  00m00s
[ 82/154] libmount-0:2.40.4-1.fc41.x86_ 100% |  48.5 MiB/s | 149.0 KiB |  00m00s
[ 83/154] libsmartcols-0:2.40.4-1.fc41. 100% |  25.8 MiB/s |  79.4 KiB |  00m00s
[ 84/154] systemd-libs-0:256.17-1.fc41. 100% | 142.4 MiB/s | 728.9 KiB |  00m00s
[ 85/154] libfdisk-0:2.40.4-1.fc41.x86_ 100% |  29.8 MiB/s | 152.5 KiB |  00m00s
[ 86/154] pam-0:1.6.1-8.fc41.x86_64     100% | 135.4 MiB/s | 554.5 KiB |  00m00s
[ 87/154] authselect-0:1.5.0-8.fc41.x86 100% |  35.6 MiB/s | 145.8 KiB |  00m00s
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[ 89/154] gdbm-libs-1:1.23-7.fc41.x86_6 100% |  27.5 MiB/s |  56.3 KiB |  00m00s
[ 90/154] libnsl2-0:2.0.1-2.fc41.x86_64 100% |  14.5 MiB/s |  29.6 KiB |  00m00s
[ 91/154] cracklib-0:2.9.11-6.fc41.x86_ 100% |  45.0 MiB/s |  92.1 KiB |  00m00s
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[ 93/154] authselect-libs-0:1.5.0-8.fc4 100% |  71.0 MiB/s | 218.0 KiB |  00m00s
[ 94/154] libzstd-0:1.5.7-1.fc41.x86_64 100% | 154.0 MiB/s | 315.4 KiB |  00m00s
[ 95/154] lua-libs-0:5.4.8-1.fc41.x86_6 100% |  42.8 MiB/s | 131.5 KiB |  00m00s
[ 96/154] rpm-sequoia-0:1.7.0-5.fc41.x8 100% | 222.5 MiB/s | 911.4 KiB |  00m00s
[ 97/154] sqlite-libs-0:3.46.1-5.fc41.x 100% | 144.8 MiB/s | 741.4 KiB |  00m00s
[ 98/154] libgomp-0:14.3.1-4.fc41.x86_6 100% |  71.6 MiB/s | 366.6 KiB |  00m00s
[ 99/154] jansson-0:2.13.1-10.fc41.x86_ 100% |  14.5 MiB/s |  44.4 KiB |  00m00s
[100/154] debugedit-0:5.1-6.fc41.x86_64 100% |  15.5 MiB/s |  79.3 KiB |  00m00s
[101/154] libarchive-0:3.7.4-4.fc41.x86 100% |  79.9 MiB/s | 409.1 KiB |  00m00s
[102/154] lz4-libs-0:1.10.0-1.fc41.x86_ 100% |  11.5 MiB/s |  70.7 KiB |  00m00s
[103/154] zstd-0:1.5.7-1.fc41.x86_64    100% | 118.0 MiB/s | 483.3 KiB |  00m00s
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[106/154] pkgconf-m4-0:2.3.0-1.fc41.noa 100% |   3.5 MiB/s |  14.3 KiB |  00m00s
[107/154] binutils-0:2.43.1-8.fc41.x86_ 100% | 214.5 MiB/s |   6.4 MiB |  00m00s
[108/154] libpkgconf-0:2.3.0-1.fc41.x86 100% |   4.7 MiB/s |  38.5 KiB |  00m00s
[109/154] curl-0:8.9.1-4.fc41.x86_64    100% |  38.1 MiB/s | 311.8 KiB |  00m00s
[110/154] efi-srpm-macros-0:5-13.fc41.n 100% |  11.0 MiB/s |  22.5 KiB |  00m00s
[111/154] build-reproducibility-srpm-ma 100% |   2.6 MiB/s |  10.8 KiB |  00m00s
[112/154] add-determinism-0:0.3.6-3.fc4 100% | 142.6 MiB/s | 875.9 KiB |  00m00s
[113/154] go-srpm-macros-0:3.8.0-1.fc41 100% |   9.2 MiB/s |  28.3 KiB |  00m00s
[114/154] pyproject-srpm-macros-0:1.18. 100% |   6.7 MiB/s |  13.7 KiB |  00m00s
[115/154] python-srpm-macros-0:3.13-5.f 100% |  10.9 MiB/s |  22.4 KiB |  00m00s
[116/154] qt5-srpm-macros-0:5.15.17-1.f 100% |   4.3 MiB/s |   8.7 KiB |  00m00s
[117/154] qt6-srpm-macros-0:6.8.3-1.fc4 100% |   8.9 MiB/s |   9.1 KiB |  00m00s
[118/154] rust-srpm-macros-0:26.4-1.fc4 100% |  10.8 MiB/s |  11.1 KiB |  00m00s
[119/154] libtirpc-0:1.3.6-1.rc3.fc41.x 100% |  43.7 MiB/s |  89.4 KiB |  00m00s
[120/154] libcom_err-0:1.47.1-6.fc41.x8 100% |  13.0 MiB/s |  26.6 KiB |  00m00s
[121/154] ca-certificates-0:2024.2.69_v 100% | 170.2 MiB/s | 871.2 KiB |  00m00s
[122/154] gdbm-1:1.23-7.fc41.x86_64     100% |  29.6 MiB/s | 151.8 KiB |  00m00s
[123/154] openssl-libs-1:3.2.6-2.fc41.x 100% | 230.9 MiB/s |   2.3 MiB |  00m00s
[124/154] crypto-policies-0:20250707-1. 100% |  23.9 MiB/s |  97.8 KiB |  00m00s
[125/154] krb5-libs-0:1.21.3-5.fc41.x86 100% | 147.8 MiB/s | 756.9 KiB |  00m00s
[126/154] keyutils-libs-0:1.6.3-4.fc41. 100% |  15.5 MiB/s |  31.6 KiB |  00m00s
[127/154] libverto-0:0.3.2-9.fc41.x86_6 100% |  10.1 MiB/s |  20.7 KiB |  00m00s
[128/154] fedora-repos-0:41-3.noarch    100% |   8.9 MiB/s |   9.1 KiB |  00m00s
[129/154] libxml2-0:2.12.10-1.fc41.x86_ 100% | 134.3 MiB/s | 687.5 KiB |  00m00s
[130/154] fedora-gpg-keys-0:41-3.noarch 100% |  33.1 MiB/s | 135.5 KiB |  00m00s
[131/154] elfutils-default-yama-scope-0 100% |   6.1 MiB/s |  12.6 KiB |  00m00s
[132/154] alternatives-0:1.31-1.fc41.x8 100% |  19.2 MiB/s |  39.4 KiB |  00m00s
[133/154] p11-kit-0:0.25.5-4.fc41.x86_6 100% | 159.4 MiB/s | 489.6 KiB |  00m00s
[134/154] libstdc++-0:14.3.1-4.fc41.x86 100% | 175.8 MiB/s | 900.3 KiB |  00m00s
[135/154] libffi-0:3.4.6-3.fc41.x86_64  100% |  13.0 MiB/s |  39.9 KiB |  00m00s
[136/154] p11-kit-trust-0:0.25.5-4.fc41 100% |  64.4 MiB/s | 131.8 KiB |  00m00s
[137/154] fedora-release-0:41-33.noarch 100% |  12.0 MiB/s |  12.3 KiB |  00m00s
[138/154] libtasn1-0:4.20.0-1.fc41.x86_ 100% |  24.2 MiB/s |  74.4 KiB |  00m00s
[139/154] fedora-release-identity-basic 100% |   6.4 MiB/s |  13.1 KiB |  00m00s
[140/154] xxhash-libs-0:0.8.3-1.fc41.x8 100% |  11.7 MiB/s |  35.9 KiB |  00m00s
[141/154] libssh-0:0.11.3-1.fc41.x86_64 100% |  56.8 MiB/s | 232.7 KiB |  00m00s
[142/154] libcurl-0:8.9.1-4.fc41.x86_64 100% |  70.3 MiB/s | 360.1 KiB |  00m00s
[143/154] gdb-minimal-0:16.3-1.fc41.x86 100% | 258.0 MiB/s |   4.4 MiB |  00m00s
[144/154] libbrotli-0:1.1.0-5.fc41.x86_ 100% |  41.6 MiB/s | 340.5 KiB |  00m00s
[145/154] libpsl-0:0.21.5-4.fc41.x86_64 100% |   7.8 MiB/s |  64.1 KiB |  00m00s
[146/154] libssh-config-0:0.11.3-1.fc41 100% |   4.4 MiB/s |   9.1 KiB |  00m00s
[147/154] libunistring-0:1.1-8.fc41.x86 100% | 177.4 MiB/s | 544.8 KiB |  00m00s
[148/154] publicsuffix-list-dafsa-0:202 100% |  19.3 MiB/s |  59.2 KiB |  00m00s
[149/154] libidn2-0:2.3.8-1.fc41.x86_64 100% |  42.7 MiB/s | 175.0 KiB |  00m00s
[150/154] libnghttp2-0:1.62.1-3.fc41.x8 100% |  37.3 MiB/s |  76.3 KiB |  00m00s
[151/154] openldap-0:2.6.10-1.fc41.x86_ 100% | 124.9 MiB/s | 255.7 KiB |  00m00s
[152/154] libevent-0:2.1.12-14.fc41.x86 100% |  83.8 MiB/s | 257.5 KiB |  00m00s
[153/154] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 194.1 MiB/s | 794.9 KiB |  00m00s
[154/154] libtool-ltdl-0:2.4.7-12.fc41. 100% |  17.4 MiB/s |  35.6 KiB |  00m00s
--------------------------------------------------------------------------------
[154/154] Total                         100% | 188.8 MiB/s |  53.2 MiB |  00m00s
Running transaction
Importing OpenPGP key 0xE99D6AD1:
 UserID     : "Fedora (41) <fedora-41-primary@fedoraproject.org>"
 Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1
 From       : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary
The key was successfully imported.
[  1/156] Verify package files          100% | 939.0   B/s | 154.0   B |  00m00s
[  2/156] Prepare transaction           100% |   4.4 KiB/s | 154.0   B |  00m00s
[  3/156] Installing libgcc-0:14.3.1-4. 100% | 269.8 MiB/s | 276.3 KiB |  00m00s
[  4/156] Installing publicsuffix-list- 100% |   0.0   B/s |  69.8 KiB |  00m00s
[  5/156] Installing libssh-config-0:0. 100% |   0.0   B/s | 816.0   B |  00m00s
[  6/156] Installing fedora-release-ide 100% |   0.0   B/s | 912.0   B |  00m00s
[  7/156] Installing fedora-gpg-keys-0: 100% |  56.9 MiB/s | 174.8 KiB |  00m00s
[  8/156] Installing fedora-repos-0:41- 100% |   0.0   B/s |   5.7 KiB |  00m00s
[  9/156] Installing fedora-release-com 100% |  23.5 MiB/s |  24.0 KiB |  00m00s
[ 10/156] Installing fedora-release-0:4 100% |   0.0   B/s | 124.0   B |  00m00s
[ 11/156] Installing setup-0:2.15.0-8.f 100% |  64.5 MiB/s | 726.5 KiB |  00m00s
>>> [RPM] /etc/hosts created as /etc/hosts.rpmnew                               
[ 12/156] Installing filesystem-0:3.18- 100% |   4.1 MiB/s | 212.5 KiB |  00m00s
[ 13/156] Installing basesystem-0:11-21 100% |   0.0   B/s | 124.0   B |  00m00s
[ 14/156] Installing rust-srpm-macros-0 100% |   0.0   B/s |   5.6 KiB |  00m00s
[ 15/156] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 732.0   B |  00m00s
[ 16/156] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 776.0   B |  00m00s
[ 17/156] Installing pkgconf-m4-0:2.3.0 100% |   0.0   B/s |  14.8 KiB |  00m00s
[ 18/156] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB |  00m00s
[ 19/156] Installing ncurses-base-0:6.5 100% |  85.9 MiB/s | 351.7 KiB |  00m00s
[ 20/156] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 21/156] Installing ncurses-libs-0:6.5 100% | 239.7 MiB/s | 981.8 KiB |  00m00s
[ 22/156] Installing glibc-0:2.40-28.fc 100% | 371.9 MiB/s |   6.7 MiB |  00m00s
[ 23/156] Installing bash-0:5.2.32-1.fc 100% | 480.5 MiB/s |   8.2 MiB |  00m00s
[ 24/156] Installing glibc-common-0:2.4 100% | 210.2 MiB/s |   1.1 MiB |  00m00s
[ 25/156] Installing glibc-gconv-extra- 100% | 321.7 MiB/s |   8.0 MiB |  00m00s
[ 26/156] Installing zlib-ng-compat-0:2 100% |   0.0   B/s | 142.7 KiB |  00m00s
[ 27/156] Installing bzip2-libs-0:1.0.8 100% |   0.0   B/s |  81.8 KiB |  00m00s
[ 28/156] Installing xz-libs-1:5.8.1-2. 100% | 213.9 MiB/s | 219.0 KiB |  00m00s
[ 29/156] Installing readline-0:8.2-10. 100% | 483.7 MiB/s | 495.3 KiB |  00m00s
[ 30/156] Installing popt-0:1.19-7.fc41 100% |  70.1 MiB/s | 143.5 KiB |  00m00s
[ 31/156] Installing libuuid-0:2.40.4-1 100% |   0.0   B/s |  41.0 KiB |  00m00s
[ 32/156] Installing libblkid-0:2.40.4- 100% | 252.1 MiB/s | 258.2 KiB |  00m00s
[ 33/156] Installing libattr-0:2.5.2-4. 100% |   0.0   B/s |  29.5 KiB |  00m00s
[ 34/156] Installing libacl-0:2.3.2-2.f 100% |   0.0   B/s |  40.7 KiB |  00m00s
[ 35/156] Installing gmp-1:6.3.0-2.fc41 100% | 397.3 MiB/s | 813.7 KiB |  00m00s
[ 36/156] Installing libxcrypt-0:4.4.38 100% | 284.4 MiB/s | 291.2 KiB |  00m00s
[ 37/156] Installing libzstd-0:1.5.7-1. 100% | 393.1 MiB/s | 805.1 KiB |  00m00s
[ 38/156] Installing elfutils-libelf-0: 100% | 390.1 MiB/s |   1.2 MiB |  00m00s
[ 39/156] Installing libstdc++-0:14.3.1 100% | 461.2 MiB/s |   2.8 MiB |  00m00s
[ 40/156] Installing libeconf-0:0.6.2-3 100% |   0.0   B/s |  59.7 KiB |  00m00s
[ 41/156] Installing gdbm-libs-1:1.23-7 100% |   0.0   B/s | 123.6 KiB |  00m00s
[ 42/156] Installing dwz-0:0.15-8.fc41. 100% | 293.3 MiB/s | 300.3 KiB |  00m00s
[ 43/156] Installing mpfr-0:4.2.1-5.fc4 100% | 407.1 MiB/s | 833.7 KiB |  00m00s
[ 44/156] Installing gawk-0:5.3.0-4.fc4 100% | 346.4 MiB/s |   1.7 MiB |  00m00s
[ 45/156] Installing unzip-0:6.0-64.fc4 100% | 381.1 MiB/s | 390.3 KiB |  00m00s
[ 46/156] Installing file-libs-0:5.45-7 100% | 764.2 MiB/s |   9.9 MiB |  00m00s
[ 47/156] Installing file-0:5.45-7.fc41 100% |  17.1 MiB/s | 105.0 KiB |  00m00s
[ 48/156] Installing crypto-policies-0: 100% |  41.5 MiB/s | 170.1 KiB |  00m00s
[ 49/156] Installing pcre2-0:10.44-1.fc 100% | 319.8 MiB/s | 654.9 KiB |  00m00s
[ 50/156] Installing grep-0:3.11-9.fc41 100% | 250.8 MiB/s |   1.0 MiB |  00m00s
[ 51/156] Installing xz-1:5.8.1-2.fc41. 100% | 267.1 MiB/s |   1.3 MiB |  00m00s
[ 52/156] Installing libcap-ng-0:0.8.5- 100% |   0.0   B/s |  71.0 KiB |  00m00s
[ 53/156] Installing audit-libs-0:4.1.1 100% | 380.7 MiB/s | 389.8 KiB |  00m00s
[ 54/156] Installing pam-libs-0:1.6.1-8 100% | 138.1 MiB/s | 141.4 KiB |  00m00s
[ 55/156] Installing libcap-0:2.70-4.fc 100% | 220.0 MiB/s | 225.2 KiB |  00m00s
[ 56/156] Installing systemd-libs-0:256 100% | 406.0 MiB/s |   2.0 MiB |  00m00s
[ 57/156] Installing libsepol-0:3.7-2.f 100% | 399.8 MiB/s | 818.8 KiB |  00m00s
[ 58/156] Installing libselinux-0:3.7-5 100% | 178.0 MiB/s | 182.3 KiB |  00m00s
[ 59/156] Installing sed-0:4.9-3.fc41.x 100% | 283.1 MiB/s | 869.7 KiB |  00m00s
[ 60/156] Installing findutils-1:4.10.0 100% | 371.6 MiB/s |   1.9 MiB |  00m00s
[ 61/156] Installing libmount-0:2.40.4- 100% | 341.6 MiB/s | 349.8 KiB |  00m00s
[ 62/156] Installing libsmartcols-0:2.4 100% | 173.2 MiB/s | 177.4 KiB |  00m00s
[ 63/156] Installing lua-libs-0:5.4.8-1 100% | 279.5 MiB/s | 286.2 KiB |  00m00s
[ 64/156] Installing lz4-libs-0:1.10.0- 100% |   0.0   B/s | 146.6 KiB |  00m00s
[ 65/156] Installing libcom_err-0:1.47. 100% |   0.0   B/s |  68.3 KiB |  00m00s
[ 66/156] Installing alternatives-0:1.3 100% |   0.0   B/s |  66.4 KiB |  00m00s
[ 67/156] Installing libffi-0:3.4.6-3.f 100% |   0.0   B/s |  87.8 KiB |  00m00s
[ 68/156] Installing libtasn1-0:4.20.0- 100% | 177.9 MiB/s | 182.2 KiB |  00m00s
[ 69/156] Installing p11-kit-0:0.25.5-4 100% | 315.9 MiB/s |   2.2 MiB |  00m00s
[ 70/156] Installing libunistring-0:1.1 100% | 432.7 MiB/s |   1.7 MiB |  00m00s
[ 71/156] Installing libidn2-0:2.3.8-1. 100% | 183.2 MiB/s | 562.8 KiB |  00m00s
[ 72/156] Installing libpsl-0:0.21.5-4. 100% |   0.0   B/s |  81.7 KiB |  00m00s
[ 73/156] Installing p11-kit-trust-0:0. 100% |  55.4 MiB/s | 397.1 KiB |  00m00s
[ 74/156] Installing zstd-0:1.5.7-1.fc4 100% | 427.5 MiB/s |   1.7 MiB |  00m00s
[ 75/156] Installing util-linux-core-0: 100% | 295.0 MiB/s |   1.5 MiB |  00m00s
[ 76/156] Installing tar-2:1.35-4.fc41. 100% | 422.6 MiB/s |   3.0 MiB |  00m00s
[ 77/156] Installing libsemanage-0:3.7- 100% | 144.2 MiB/s | 295.2 KiB |  00m00s
[ 78/156] Installing shadow-utils-2:4.1 100% | 189.3 MiB/s |   4.2 MiB |  00m00s
[ 79/156] Installing libutempter-0:1.2. 100% |  58.3 MiB/s |  59.7 KiB |  00m00s
[ 80/156] Installing zip-0:3.0-41.fc41. 100% | 230.2 MiB/s | 707.1 KiB |  00m00s
[ 81/156] Installing gdbm-1:1.23-7.fc41 100% | 227.4 MiB/s | 465.8 KiB |  00m00s
[ 82/156] Installing cyrus-sasl-lib-0:2 100% | 384.3 MiB/s |   2.3 MiB |  00m00s
[ 83/156] Installing libfdisk-0:2.40.4- 100% | 349.0 MiB/s | 357.4 KiB |  00m00s
[ 84/156] Installing libxml2-0:2.12.10- 100% | 430.1 MiB/s |   1.7 MiB |  00m00s
[ 85/156] Installing bzip2-0:1.0.8-19.f 100% |  97.8 MiB/s | 100.2 KiB |  00m00s
[ 86/156] Installing sqlite-libs-0:3.46 100% | 374.1 MiB/s |   1.5 MiB |  00m00s
[ 87/156] Installing add-determinism-0: 100% | 471.2 MiB/s |   2.4 MiB |  00m00s
[ 88/156] Installing build-reproducibil 100% |   0.0   B/s |   1.0 KiB |  00m00s
[ 89/156] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB |  00m00s
[ 90/156] Installing patch-0:2.7.6-25.f 100% | 261.9 MiB/s | 268.2 KiB |  00m00s
[ 91/156] Installing elfutils-default-y 100% | 408.6 KiB/s |   2.0 KiB |  00m00s
[ 92/156] Installing elfutils-libs-0:0. 100% | 336.2 MiB/s | 688.5 KiB |  00m00s
[ 93/156] Installing cpio-0:2.15-2.fc41 100% | 274.9 MiB/s |   1.1 MiB |  00m00s
[ 94/156] Installing diffutils-0:3.10-8 100% | 318.1 MiB/s |   1.6 MiB |  00m00s
[ 95/156] Installing json-c-0:0.17-4.fc 100% |  81.7 MiB/s |  83.6 KiB |  00m00s
[ 96/156] Installing libgomp-0:14.3.1-4 100% | 512.7 MiB/s | 525.0 KiB |  00m00s
[ 97/156] Installing jansson-0:2.13.1-1 100% |  87.6 MiB/s |  89.7 KiB |  00m00s
[ 98/156] Installing libpkgconf-0:2.3.0 100% |   0.0   B/s |  79.3 KiB |  00m00s
[ 99/156] Installing pkgconf-0:2.3.0-1. 100% |  89.0 MiB/s |  91.1 KiB |  00m00s
[100/156] Installing pkgconf-pkg-config 100% |   0.0   B/s |   1.8 KiB |  00m00s
[101/156] Installing keyutils-libs-0:1. 100% |   0.0   B/s |  55.8 KiB |  00m00s
[102/156] Installing libverto-0:0.3.2-9 100% |   0.0   B/s |  31.3 KiB |  00m00s
[103/156] Installing xxhash-libs-0:0.8. 100% |  87.8 MiB/s |  89.9 KiB |  00m00s
[104/156] Installing libbrotli-0:1.1.0- 100% | 410.1 MiB/s | 839.9 KiB |  00m00s
[105/156] Installing libnghttp2-0:1.62. 100% | 171.2 MiB/s | 175.3 KiB |  00m00s
[106/156] Installing libtool-ltdl-0:2.4 100% |   0.0   B/s |  67.3 KiB |  00m00s
[107/156] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[108/156] Installing package-notes-srpm 100% |   0.0   B/s |   2.0 KiB |  00m00s
[109/156] Installing openblas-srpm-macr 100% |   0.0   B/s | 392.0   B |  00m00s
[110/156] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.2 KiB |  00m00s
[111/156] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[112/156] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[113/156] Installing ghc-srpm-macros-0: 100% |   0.0   B/s |   1.0 KiB |  00m00s
[114/156] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[115/156] Installing ansible-srpm-macro 100% |  35.4 MiB/s |  36.2 KiB |  00m00s
[116/156] Installing coreutils-common-0 100% | 430.4 MiB/s |  11.2 MiB |  00m00s
[117/156] Installing openssl-libs-1:3.2 100% | 461.0 MiB/s |   7.8 MiB |  00m00s
[118/156] Installing coreutils-0:9.5-12 100% | 291.7 MiB/s |   5.5 MiB |  00m00s
[119/156] Installing ca-certificates-0: 100% |   4.1 MiB/s |   2.4 MiB |  00m01s
[120/156] Installing krb5-libs-0:1.21.3 100% | 331.3 MiB/s |   2.3 MiB |  00m00s
[121/156] Installing libarchive-0:3.7.4 100% | 302.3 MiB/s | 928.6 KiB |  00m00s
[122/156] Installing libtirpc-0:1.3.6-1 100% | 194.7 MiB/s | 199.4 KiB |  00m00s
[123/156] Installing gzip-0:1.13-2.fc41 100% | 192.7 MiB/s | 394.6 KiB |  00m00s
[124/156] Installing authselect-libs-0: 100% | 204.4 MiB/s | 837.2 KiB |  00m00s
[125/156] Installing cracklib-0:2.9.11- 100% |  81.5 MiB/s | 250.3 KiB |  00m00s
[126/156] Installing libpwquality-0:1.4 100% | 140.0 MiB/s | 430.1 KiB |  00m00s
[127/156] Installing libnsl2-0:2.0.1-2. 100% |  57.7 MiB/s |  59.1 KiB |  00m00s
[128/156] Installing pam-0:1.6.1-8.fc41 100% | 185.9 MiB/s |   1.9 MiB |  00m00s
[129/156] Installing libssh-0:0.11.3-1. 100% | 279.9 MiB/s | 573.3 KiB |  00m00s
[130/156] Installing rpm-sequoia-0:1.7. 100% | 403.1 MiB/s |   2.4 MiB |  00m00s
[131/156] Installing rpm-libs-0:4.20.1- 100% | 357.2 MiB/s | 731.5 KiB |  00m00s
[132/156] Installing rpm-build-libs-0:4 100% | 206.6 MiB/s | 211.5 KiB |  00m00s
[133/156] Installing libevent-0:2.1.12- 100% | 292.8 MiB/s | 899.5 KiB |  00m00s
[134/156] Installing openldap-0:2.6.10- 100% | 317.3 MiB/s | 649.7 KiB |  00m00s
[135/156] Installing libcurl-0:8.9.1-4. 100% | 402.0 MiB/s | 823.2 KiB |  00m00s
[136/156] Installing elfutils-debuginfo 100% |  84.4 MiB/s |  86.5 KiB |  00m00s
[137/156] Installing elfutils-0:0.193-2 100% | 424.1 MiB/s |   3.0 MiB |  00m00s
[138/156] Installing binutils-0:2.43.1- 100% | 417.8 MiB/s |  27.6 MiB |  00m00s
[139/156] Installing gdb-minimal-0:16.3 100% | 427.8 MiB/s |  13.3 MiB |  00m00s
[140/156] Installing debugedit-0:5.1-6. 100% | 198.9 MiB/s | 203.6 KiB |  00m00s
[141/156] Installing curl-0:8.9.1-4.fc4 100% |  78.0 MiB/s | 798.6 KiB |  00m00s
[142/156] Installing rpm-0:4.20.1-1.fc4 100% | 209.4 MiB/s |   2.5 MiB |  00m00s
[143/156] Installing lua-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[144/156] Installing zig-srpm-macros-0: 100% |   0.0   B/s |   1.7 KiB |  00m00s
[145/156] Installing efi-srpm-macros-0: 100% |   0.0   B/s |  41.2 KiB |  00m00s
[146/156] Installing fonts-srpm-macros- 100% |   0.0   B/s |  57.0 KiB |  00m00s
[147/156] Installing forge-srpm-macros- 100% |   0.0   B/s |  40.3 KiB |  00m00s
[148/156] Installing go-srpm-macros-0:3 100% |   0.0   B/s |  63.0 KiB |  00m00s
[149/156] Installing python-srpm-macros 100% |   0.0   B/s |  52.2 KiB |  00m00s
[150/156] Installing redhat-rpm-config- 100% |  92.9 MiB/s | 190.2 KiB |  00m00s
[151/156] Installing rpm-build-0:4.20.1 100% |  98.8 MiB/s | 202.3 KiB |  00m00s
[152/156] Installing pyproject-srpm-mac 100% |   2.4 MiB/s |   2.5 KiB |  00m00s
[153/156] Installing util-linux-0:2.40. 100% | 195.0 MiB/s |   3.7 MiB |  00m00s
[154/156] Installing authselect-0:1.5.0 100% |  79.1 MiB/s | 161.9 KiB |  00m00s
[155/156] Installing which-0:2.21-42.fc 100% |  80.5 MiB/s |  82.4 KiB |  00m00s
[156/156] Installing info-0:7.1.1-1.fc4 100% | 479.7 KiB/s | 362.2 KiB |  00m01s
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.3.6-3.fc41.x86_64
alternatives-1.31-1.fc41.x86_64
ansible-srpm-macros-1-16.fc41.noarch
audit-libs-4.1.1-1.fc41.x86_64
authselect-1.5.0-8.fc41.x86_64
authselect-libs-1.5.0-8.fc41.x86_64
basesystem-11-21.fc41.noarch
bash-5.2.32-1.fc41.x86_64
binutils-2.43.1-8.fc41.x86_64
build-reproducibility-srpm-macros-0.3.6-3.fc41.noarch
bzip2-1.0.8-19.fc41.x86_64
bzip2-libs-1.0.8-19.fc41.x86_64
ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch
coreutils-9.5-12.fc41.x86_64
coreutils-common-9.5-12.fc41.x86_64
cpio-2.15-2.fc41.x86_64
cracklib-2.9.11-6.fc41.x86_64
crypto-policies-20250707-1.git836bbee.fc41.noarch
curl-8.9.1-4.fc41.x86_64
cyrus-sasl-lib-2.1.28-27.fc41.x86_64
debugedit-5.1-6.fc41.x86_64
diffutils-3.10-8.fc41.x86_64
dwz-0.15-8.fc41.x86_64
ed-1.20.2-2.fc41.x86_64
efi-srpm-macros-5-13.fc41.noarch
elfutils-0.193-2.fc41.x86_64
elfutils-debuginfod-client-0.193-2.fc41.x86_64
elfutils-default-yama-scope-0.193-2.fc41.noarch
elfutils-libelf-0.193-2.fc41.x86_64
elfutils-libs-0.193-2.fc41.x86_64
fedora-gpg-keys-41-3.noarch
fedora-release-41-33.noarch
fedora-release-common-41-33.noarch
fedora-release-identity-basic-41-33.noarch
fedora-repos-41-3.noarch
file-5.45-7.fc41.x86_64
file-libs-5.45-7.fc41.x86_64
filesystem-3.18-23.fc41.x86_64
findutils-4.10.0-4.fc41.x86_64
fonts-srpm-macros-2.0.5-17.fc41.noarch
forge-srpm-macros-0.4.0-1.fc41.noarch
fpc-srpm-macros-1.3-13.fc41.noarch
gawk-5.3.0-4.fc41.x86_64
gdb-minimal-16.3-1.fc41.x86_64
gdbm-1.23-7.fc41.x86_64
gdbm-libs-1.23-7.fc41.x86_64
ghc-srpm-macros-1.9.1-2.fc41.noarch
glibc-2.40-28.fc41.x86_64
glibc-common-2.40-28.fc41.x86_64
glibc-gconv-extra-2.40-28.fc41.x86_64
glibc-minimal-langpack-2.40-28.fc41.x86_64
gmp-6.3.0-2.fc41.x86_64
gnat-srpm-macros-6-6.fc41.noarch
go-srpm-macros-3.8.0-1.fc41.noarch
gpg-pubkey-e99d6ad1-64d2612c
grep-3.11-9.fc41.x86_64
gzip-1.13-2.fc41.x86_64
info-7.1.1-1.fc41.x86_64
jansson-2.13.1-10.fc41.x86_64
json-c-0.17-4.fc41.x86_64
kernel-srpm-macros-1.0-24.fc41.noarch
keyutils-libs-1.6.3-4.fc41.x86_64
krb5-libs-1.21.3-5.fc41.x86_64
libacl-2.3.2-2.fc41.x86_64
libarchive-3.7.4-4.fc41.x86_64
libattr-2.5.2-4.fc41.x86_64
libblkid-2.40.4-1.fc41.x86_64
libbrotli-1.1.0-5.fc41.x86_64
libcap-2.70-4.fc41.x86_64
libcap-ng-0.8.5-3.fc41.x86_64
libcom_err-1.47.1-6.fc41.x86_64
libcurl-8.9.1-4.fc41.x86_64
libeconf-0.6.2-3.fc41.x86_64
libevent-2.1.12-14.fc41.x86_64
libfdisk-2.40.4-1.fc41.x86_64
libffi-3.4.6-3.fc41.x86_64
libgcc-14.3.1-4.fc41.x86_64
libgomp-14.3.1-4.fc41.x86_64
libidn2-2.3.8-1.fc41.x86_64
libmount-2.40.4-1.fc41.x86_64
libnghttp2-1.62.1-3.fc41.x86_64
libnsl2-2.0.1-2.fc41.x86_64
libpkgconf-2.3.0-1.fc41.x86_64
libpsl-0.21.5-4.fc41.x86_64
libpwquality-1.4.5-11.fc41.x86_64
libselinux-3.7-5.fc41.x86_64
libsemanage-3.7-2.fc41.x86_64
libsepol-3.7-2.fc41.x86_64
libsmartcols-2.40.4-1.fc41.x86_64
libssh-0.11.3-1.fc41.x86_64
libssh-config-0.11.3-1.fc41.noarch
libstdc++-14.3.1-4.fc41.x86_64
libtasn1-4.20.0-1.fc41.x86_64
libtirpc-1.3.6-1.rc3.fc41.x86_64
libtool-ltdl-2.4.7-12.fc41.x86_64
libunistring-1.1-8.fc41.x86_64
libutempter-1.2.1-15.fc41.x86_64
libuuid-2.40.4-1.fc41.x86_64
libverto-0.3.2-9.fc41.x86_64
libxcrypt-4.4.38-7.fc41.x86_64
libxml2-2.12.10-1.fc41.x86_64
libzstd-1.5.7-1.fc41.x86_64
lua-libs-5.4.8-1.fc41.x86_64
lua-srpm-macros-1-14.fc41.noarch
lz4-libs-1.10.0-1.fc41.x86_64
mpfr-4.2.1-5.fc41.x86_64
ncurses-base-6.5-2.20240629.fc41.noarch
ncurses-libs-6.5-2.20240629.fc41.x86_64
ocaml-srpm-macros-10-3.fc41.noarch
openblas-srpm-macros-2-18.fc41.noarch
openldap-2.6.10-1.fc41.x86_64
openssl-libs-3.2.6-2.fc41.x86_64
p11-kit-0.25.5-4.fc41.x86_64
p11-kit-trust-0.25.5-4.fc41.x86_64
package-notes-srpm-macros-0.5-12.fc41.noarch
pam-1.6.1-8.fc41.x86_64
pam-libs-1.6.1-8.fc41.x86_64
patch-2.7.6-25.fc41.x86_64
pcre2-10.44-1.fc41.1.x86_64
pcre2-syntax-10.44-1.fc41.1.noarch
perl-srpm-macros-1-56.fc41.noarch
pkgconf-2.3.0-1.fc41.x86_64
pkgconf-m4-2.3.0-1.fc41.noarch
pkgconf-pkg-config-2.3.0-1.fc41.x86_64
popt-1.19-7.fc41.x86_64
publicsuffix-list-dafsa-20250616-1.fc41.noarch
pyproject-srpm-macros-1.18.4-1.fc41.noarch
python-srpm-macros-3.13-5.fc41.noarch
qt5-srpm-macros-5.15.17-1.fc41.noarch
qt6-srpm-macros-6.8.3-1.fc41.noarch
readline-8.2-10.fc41.x86_64
redhat-rpm-config-294-1.fc41.noarch
rpm-4.20.1-1.fc41.x86_64
rpm-build-4.20.1-1.fc41.x86_64
rpm-build-libs-4.20.1-1.fc41.x86_64
rpm-libs-4.20.1-1.fc41.x86_64
rpm-sequoia-1.7.0-5.fc41.x86_64
rust-srpm-macros-26.4-1.fc41.noarch
sed-4.9-3.fc41.x86_64
setup-2.15.0-8.fc41.noarch
shadow-utils-4.15.1-12.fc41.x86_64
sqlite-libs-3.46.1-5.fc41.x86_64
systemd-libs-256.17-1.fc41.x86_64
tar-1.35-4.fc41.x86_64
unzip-6.0-64.fc41.x86_64
util-linux-2.40.4-1.fc41.x86_64
util-linux-core-2.40.4-1.fc41.x86_64
which-2.21-42.fc41.x86_64
xxhash-libs-0.8.3-1.fc41.x86_64
xz-5.8.1-2.fc41.x86_64
xz-libs-5.8.1-2.fc41.x86_64
zig-srpm-macros-1-3.fc41.noarch
zip-3.0-41.fc41.x86_64
zlib-ng-compat-2.2.3-2.fc41.x86_64
zstd-1.5.7-1.fc41.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1761696000
Wrote: /builddir/build/SRPMS/bout++-5.2.0-1.fc41.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-41-x86_64-1761740611.709676/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-mwhytal7/bout++/bout++.spec) Config(child) 0 minutes 19 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.2.0-1.fc41.src.rpm)  Config(fedora-41-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1761740611.709676/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1761740611.709676/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1761740611.709676/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-4.20.1-1.fc41.x86_64
  rpm-sequoia-1.7.0-5.fc41.x86_64
  dnf5-5.2.16.0-1.fc41.x86_64
  dnf5-plugins-5.2.16.0-1.fc41.x86_64
Finish: chroot init
Start: build phase for bout++-5.2.0-1.fc41.src.rpm
Start: build setup for bout++-5.2.0-1.fc41.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1761696000
Wrote: /builddir/build/SRPMS/bout++-5.2.0-1.fc41.src.rpm
Updating and loading repositories:
 Copr repository                        100% | 126.5 KiB/s |   1.5 KiB |  00m00s
 fedora                                 100% |  58.7 KiB/s |  32.4 KiB |  00m01s
 updates                                100% |  30.5 KiB/s |   8.2 KiB |  00m00s
Repositories loaded.
Package                               Arch   Version                        Repository      Size
Installing:
 chrpath                              x86_64 0.16-24.fc41                   fedora      54.6 KiB
 cmake                                x86_64 3.30.8-1.fc41                  updates     32.7 MiB
 doxygen                              x86_64 2:1.12.0-2.fc41                updates     19.2 MiB
 environment-modules                  x86_64 5.4.0-2.fc41                   fedora       1.7 MiB
 fftw-devel                           x86_64 3.3.10-13.fc41                 fedora     284.2 KiB
 flexiblas-devel                      x86_64 3.4.5-1.fc41                   updates      4.9 MiB
 fmt-devel                            x86_64 11.0.2-2.fc41                  fedora     575.3 KiB
 gcc-c++                              x86_64 14.3.1-4.fc41                  updates     38.2 MiB
 gettext-devel                        x86_64 0.22.5-6.fc41                  fedora       1.0 MiB
 hdf5-devel                           x86_64 1.12.1-21.fc41                 updates      3.9 MiB
 hdf5-mpich-devel                     x86_64 1.12.1-21.fc41                 updates      3.6 MiB
 hdf5-openmpi-devel                   x86_64 1.12.1-21.fc41                 updates      3.6 MiB
 m4                                   x86_64 1.4.19-10.fc41                 fedora     592.9 KiB
 make                                 x86_64 1:4.4.1-8.fc41                 fedora       1.8 MiB
 mpark-variant-devel                  x86_64 1.4.0-13.fc41                  fedora     117.1 KiB
 mpich-devel                          x86_64 4.2.2-1.fc41                   fedora       2.0 MiB
 netcdf-cxx4-devel                    x86_64 4.3.1-13.fc41                  fedora     459.0 KiB
 netcdf-devel                         x86_64 4.9.2-6.fc41                   fedora     368.7 KiB
 openmpi-devel                        x86_64 5.0.5-2.fc41                   fedora       3.2 MiB
 petsc-mpich-devel                    x86_64 3.20.6-10.fc41                 fedora       9.6 MiB
 petsc-openmpi-devel                  x86_64 3.20.6-10.fc41                 fedora      10.2 MiB
 python3                              x86_64 3.13.9-1.fc41                  updates     32.8 KiB
 python3-boutdata                     noarch 0.2.1-7.fc41                   fedora     545.5 KiB
 python3-boututils                    noarch 0.2.1-6.fc41                   fedora     435.6 KiB
 python3-cython                       x86_64 3.0.11-1.fc41                  fedora      18.1 MiB
 python3-devel                        x86_64 3.13.9-1.fc41                  updates      1.8 MiB
 python3-jinja2                       noarch 3.1.6-1.fc41                   updates      2.9 MiB
 python3-netcdf4                      x86_64 1.7.1-2.fc41                   fedora       2.3 MiB
 python3-numpy                        x86_64 1:1.26.4-8.fc41                fedora      43.8 MiB
 python3-scipy                        x86_64 1.11.3-16.fc41                 updates     62.5 MiB
 python3-sphinx                       noarch 1:7.3.7-2.fc41                 fedora      10.8 MiB
 python3-tables                       x86_64 3.10.1-1.fc41                  fedora      10.2 MiB
 python3-zoidberg                     noarch 0.1.1-7.fc41                   fedora     515.6 KiB
 sundials-devel                       x86_64 6.7.0-4.fc41                   fedora      11.1 MiB
 sundials-mpich-devel                 x86_64 6.7.0-4.fc41                   fedora      12.1 MiB
 sundials-openmpi-devel               x86_64 6.7.0-4.fc41                   fedora      12.1 MiB
 zlib-ng-compat-devel                 x86_64 2.2.3-2.fc41                   updates    107.0 KiB
Installing dependencies:
 MUMPS-common                         noarch 5.6.2-5.fc41                   fedora     948.0 KiB
 MUMPS-mpich                          x86_64 5.6.2-5.fc41                   fedora       9.7 MiB
 MUMPS-openmpi                        x86_64 5.6.2-5.fc41                   fedora       9.7 MiB
 SuperLUMT-common                     noarch 4.0.1-3.fc41                   fedora     679.2 KiB
 SuperLUMT64-double                   x86_64 4.0.1-3.fc41                   fedora     161.2 KiB
 abattis-cantarell-vf-fonts           noarch 0.301-13.fc41                  fedora     192.7 KiB
 adobe-mappings-cmap                  noarch 20231115-1.fc41                updates     15.2 MiB
 adobe-mappings-cmap-deprecated       noarch 20231115-1.fc41                updates    582.1 KiB
 adobe-mappings-pdf                   noarch 20190401-8.fc41                fedora       4.4 MiB
 annobin-docs                         noarch 12.69-1.fc41                   fedora      97.7 KiB
 annobin-plugin-gcc                   x86_64 12.69-1.fc41                   fedora     985.0 KiB
 avahi-libs                           x86_64 0.8-29.fc41                    fedora     166.3 KiB
 blosc                                x86_64 1.21.6-1.fc41                  fedora     126.3 KiB
 blosc2                               x86_64 2.15.2-1.fc41                  updates    547.4 KiB
 brotli                               x86_64 1.1.0-5.fc41                   fedora      31.8 KiB
 brotli-devel                         x86_64 1.1.0-5.fc41                   fedora      65.6 KiB
 cairo                                x86_64 1.18.2-2.fc41                  updates      1.7 MiB
 cairo-gobject                        x86_64 1.18.2-2.fc41                  updates     34.1 KiB
 cmake-data                           noarch 3.30.8-1.fc41                  updates      8.2 MiB
 cmake-filesystem                     x86_64 3.30.8-1.fc41                  updates      0.0   B
 cmake-rpm-macros                     noarch 3.30.8-1.fc41                  updates      7.7 KiB
 cpp                                  x86_64 14.3.1-4.fc41                  updates     35.0 MiB
 cpuinfo                              x86_64 23.11.04-0.gitd6860c4.fc41.1   fedora     114.3 KiB
 cups-filesystem                      noarch 1:2.4.14-2.fc41                updates      0.0   B
 cups-libs                            x86_64 1:2.4.14-2.fc41                updates    626.9 KiB
 dbus                                 x86_64 1:1.14.10-4.fc41               fedora       0.0   B
 dbus-broker                          x86_64 36-5.fc41                      updates    386.8 KiB
 dbus-common                          noarch 1:1.14.10-4.fc41               fedora      11.2 KiB
 dbus-libs                            x86_64 1:1.14.10-4.fc41               fedora     368.9 KiB
 default-fonts-core-sans              noarch 4.1-2.fc41                     fedora      11.9 KiB
 dejavu-sans-fonts                    noarch 2.37-24.fc41                   fedora       5.5 MiB
 emacs-filesystem                     noarch 1:30.0-3.fc41                  fedora       0.0   B
 expat                                x86_64 2.7.2-1.fc41                   updates    306.8 KiB
 fftw                                 x86_64 3.3.10-13.fc41                 fedora     182.6 KiB
 fftw-libs                            x86_64 3.3.10-13.fc41                 fedora       0.0   B
 fftw-libs-double                     x86_64 3.3.10-13.fc41                 fedora       3.4 MiB
 fftw-libs-long                       x86_64 3.3.10-13.fc41                 fedora       1.5 MiB
 fftw-libs-quad                       x86_64 3.3.10-13.fc41                 fedora       2.5 MiB
 fftw-libs-single                     x86_64 3.3.10-13.fc41                 fedora       3.6 MiB
 flexiblas                            x86_64 3.4.5-1.fc41                   updates     50.4 KiB
 flexiblas-netlib                     x86_64 3.4.5-1.fc41                   updates     10.9 MiB
 flexiblas-netlib64                   x86_64 3.4.5-1.fc41                   updates     10.9 MiB
 flexiblas-openblas-openmp            x86_64 3.4.5-1.fc41                   updates     43.3 KiB
 flexiblas-openblas-openmp64          x86_64 3.4.5-1.fc41                   updates     43.3 KiB
 fmt                                  x86_64 11.0.2-2.fc41                  fedora     264.1 KiB
 fontconfig                           x86_64 2.15.0-8.fc41                  fedora     791.9 KiB
 fonts-filesystem                     noarch 1:2.0.5-17.fc41                fedora       0.0   B
 freetype                             x86_64 2.13.3-1.fc41                  fedora     850.5 KiB
 fribidi                              x86_64 1.0.15-2.fc41                  fedora     368.4 KiB
 gcc                                  x86_64 14.3.1-4.fc41                  updates    104.3 MiB
 gcc-gfortran                         x86_64 14.3.1-4.fc41                  updates     37.2 MiB
 gcc-plugin-annobin                   x86_64 14.3.1-4.fc41                  updates     61.1 KiB
 gd                                   x86_64 2.3.3-17.fc41                  fedora     403.7 KiB
 gdk-pixbuf2                          x86_64 2.42.12-9.fc41                 updates      2.5 MiB
 gettext                              x86_64 0.22.5-6.fc41                  fedora       5.2 MiB
 gettext-common-devel                 noarch 0.22.5-6.fc41                  fedora     586.5 KiB
 gettext-envsubst                     x86_64 0.22.5-6.fc41                  fedora      74.9 KiB
 gettext-libs                         x86_64 0.22.5-6.fc41                  fedora       1.7 MiB
 gettext-runtime                      x86_64 0.22.5-6.fc41                  fedora     481.3 KiB
 glib2                                x86_64 2.82.5-1.fc41                  updates     14.7 MiB
 glibc-devel                          x86_64 2.40-28.fc41                   updates      2.3 MiB
 gnupg2                               x86_64 2.4.5-3.fc41                   fedora       9.5 MiB
 gnutls                               x86_64 3.8.10-1.fc41                  updates      3.8 MiB
 google-droid-sans-fonts              noarch 20200215-21.fc41               fedora       6.3 MiB
 google-noto-fonts-common             noarch 20240701-2.fc41                fedora      17.5 KiB
 google-noto-sans-vf-fonts            noarch 20240701-2.fc41                fedora       1.2 MiB
 gpgme                                x86_64 1.23.2-5.fc41                  fedora     579.3 KiB
 gpgmepp                              x86_64 1.23.2-5.fc41                  fedora     424.2 KiB
 graphite2                            x86_64 1.3.14-16.fc41                 fedora     192.0 KiB
 graphviz                             x86_64 12.1.0-1.fc41                  fedora      20.8 MiB
 graphviz-libs                        x86_64 12.1.0-1.fc41                  fedora       1.2 MiB
 groff-base                           x86_64 1.23.0-7.fc41                  fedora       3.8 MiB
 gts                                  x86_64 0.7.6-49.20121130.fc41         fedora     650.2 KiB
 harfbuzz                             x86_64 9.0.0-3.fc41                   fedora       2.6 MiB
 hdf-libs                             x86_64 4.2.16.2-2.fc41                fedora     691.6 KiB
 hdf5                                 x86_64 1.12.1-21.fc41                 updates      7.9 MiB
 hdf5-mpich                           x86_64 1.12.1-21.fc41                 updates      7.8 MiB
 hdf5-openmpi                         x86_64 1.12.1-21.fc41                 updates      7.8 MiB
 hwloc-libs                           x86_64 2.12.0-1.fc41                  updates      2.9 MiB
 hypre-mpich                          x86_64 2.24.0-14.fc41                 fedora       4.5 MiB
 hypre-openmpi                        x86_64 2.24.0-14.fc41                 fedora       4.5 MiB
 jbig2dec-libs                        x86_64 0.20-5.fc41                    fedora     169.0 KiB
 jbigkit-libs                         x86_64 2.1-30.fc41                    fedora     117.6 KiB
 jsoncpp                              x86_64 1.9.5-8.fc41                   fedora     253.4 KiB
 kernel-headers                       x86_64 6.17.4-100.fc41                updates      6.7 MiB
 lasi                                 x86_64 1.1.3-14.fc41                  fedora     130.8 KiB
 lcms2                                x86_64 2.16-4.fc41                    fedora     424.9 KiB
 less                                 x86_64 679-1.fc41                     updates    418.6 KiB
 libICE                               x86_64 1.1.2-1.fc41                   updates    196.2 KiB
 libSM                                x86_64 1.2.5-1.fc41                   updates     99.6 KiB
 libX11                               x86_64 1.8.11-1.fc41                  updates      1.3 MiB
 libX11-common                        noarch 1.8.11-1.fc41                  updates      1.2 MiB
 libXau                               x86_64 1.0.11-7.fc41                  fedora      66.9 KiB
 libXext                              x86_64 1.3.6-2.fc41                   fedora      90.1 KiB
 libXft                               x86_64 2.3.8-7.fc41                   fedora     164.5 KiB
 libXpm                               x86_64 3.5.17-4.fc41                  fedora     148.4 KiB
 libXrender                           x86_64 0.9.12-1.fc41                  updates     48.8 KiB
 libXt                                x86_64 1.3.1-1.fc41                   updates    429.9 KiB
 libaec                               x86_64 1.1.3-1.fc41                   fedora      98.1 KiB
 libaec-devel                         x86_64 1.1.3-1.fc41                   fedora      12.5 KiB
 libaom                               x86_64 3.13.1-1.fc41                  updates      5.0 MiB
 libassuan                            x86_64 2.5.7-2.fc41                   fedora     163.8 KiB
 libavif                              x86_64 1.1.1-1.fc41                   updates    214.1 KiB
 libb2                                x86_64 0.98.1-12.fc41                 fedora      42.2 KiB
 libcbor                              x86_64 0.11.0-2.fc41                  fedora      73.9 KiB
 libcurl-devel                        x86_64 8.9.1-4.fc41                   updates      1.3 MiB
 libdatrie                            x86_64 0.2.13-10.fc41                 fedora      57.9 KiB
 libdav1d                             x86_64 1.5.1-1.fc41                   updates      1.7 MiB
 libedit                              x86_64 3.1-55.20251016cvs.fc41        updates    244.2 KiB
 libfabric                            x86_64 1.22.0-1.fc41                  fedora       5.2 MiB
 libfido2                             x86_64 1.15.0-2.fc41                  fedora     238.2 KiB
 libgcrypt                            x86_64 1.11.0-3.fc41                  fedora       1.5 MiB
 libgfortran                          x86_64 14.3.1-4.fc41                  updates      3.0 MiB
 libgpg-error                         x86_64 1.50-2.fc41                    fedora     889.5 KiB
 libgs                                x86_64 10.03.1-8.fc41                 updates     23.3 MiB
 libibverbs                           x86_64 51.0-5.fc41                    updates      1.2 MiB
 libidn2-devel                        x86_64 2.3.8-1.fc41                   updates    148.2 KiB
 libijs                               x86_64 0.35-23.fc41                   fedora      61.6 KiB
 libimagequant                        x86_64 4.0.3-5.fc41                   fedora     666.7 KiB
 libjpeg-turbo                        x86_64 3.0.2-3.fc41                   fedora     776.9 KiB
 libksba                              x86_64 1.6.7-2.fc41                   fedora     398.4 KiB
 liblerc                              x86_64 4.0.0-8.fc41                   updates    607.5 KiB
 libmpc                               x86_64 1.3.1-6.fc41                   fedora     164.7 KiB
 libnghttp2-devel                     x86_64 1.62.1-3.fc41                  updates    295.2 KiB
 libnl3                               x86_64 3.11.0-1.fc41                  updates      1.0 MiB
 libpaper                             x86_64 1:2.1.1-7.fc41                 fedora      48.9 KiB
 libpipeline                          x86_64 1.5.7-6.fc41                   fedora     124.3 KiB
 libpng                               x86_64 2:1.6.40-4.fc41                fedora     245.8 KiB
 libpsl-devel                         x86_64 0.21.5-4.fc41                  fedora     110.3 KiB
 libpsm2                              x86_64 11.2.230-5.fc41                fedora     442.5 KiB
 libqhull_r                           x86_64 1:8.0.2-5.fc41                 fedora     483.4 KiB
 libquadmath                          x86_64 14.3.1-4.fc41                  updates    325.9 KiB
 libquadmath-devel                    x86_64 14.3.1-4.fc41                  updates     22.1 KiB
 libraqm                              x86_64 0.8.0-8.fc41                   fedora      28.6 KiB
 librdmacm                            x86_64 51.0-5.fc41                    updates    154.2 KiB
 librsvg2                             x86_64 2.59.2-1.fc41                  updates      4.5 MiB
 libseccomp                           x86_64 2.5.5-2.fc41                   fedora     173.3 KiB
 libssh-devel                         x86_64 0.11.3-1.fc41                  updates    178.0 KiB
 libstdc++-devel                      x86_64 14.3.1-4.fc41                  updates     15.4 MiB
 libtextstyle                         x86_64 0.22.5-6.fc41                  fedora     195.6 KiB
 libthai                              x86_64 0.1.29-9.fc41                  fedora     783.5 KiB
 libtiff                              x86_64 4.6.0-6.fc41.2                 updates    602.0 KiB
 libuv                                x86_64 1:1.51.0-1.fc41                updates    571.7 KiB
 libvmaf                              x86_64 3.0.0-2.fc41                   fedora     823.0 KiB
 libwebp                              x86_64 1.5.0-1.fc41                   updates    814.4 KiB
 libxcb                               x86_64 1.17.0-3.fc41                  fedora       1.2 MiB
 libxcrypt-devel                      x86_64 4.4.38-7.fc41                  updates     30.8 KiB
 libxslt                              x86_64 1.1.43-1.fc41                  updates    468.4 KiB
 libyuv                               x86_64 0-0.55.20240704git96bbdb5.fc41 fedora     679.0 KiB
 logrotate                            x86_64 3.22.0-2.fc41                  fedora     153.1 KiB
 lzo                                  x86_64 2.10-13.fc41                   fedora     166.9 KiB
 man-db                               x86_64 2.12.1-2.fc41                  fedora       2.8 MiB
 metis                                x86_64 5.1.0.3-6.fc41                 fedora     985.2 KiB
 mpdecimal                            x86_64 2.5.1-16.fc41                  fedora     204.9 KiB
 mpich                                x86_64 4.2.2-1.fc41                   fedora       6.9 MiB
 munge                                x86_64 0.5.16-3.fc41                  fedora     346.3 KiB
 munge-libs                           x86_64 0.5.16-3.fc41                  fedora      32.1 KiB
 ncurses                              x86_64 6.5-2.20240629.fc41            fedora     627.3 KiB
 netcdf                               x86_64 4.9.2-6.fc41                   fedora       2.4 MiB
 netcdf-cxx4                          x86_64 4.3.1-13.fc41                  fedora     317.0 KiB
 netpbm                               x86_64 11.10.00-1.fc41                updates    577.8 KiB
 nettle                               x86_64 3.10-3.fc41                    fedora     793.0 KiB
 npth                                 x86_64 1.7-2.fc41                     fedora      49.6 KiB
 nspr                                 x86_64 4.37.0-3.fc41                  updates    320.4 KiB
 nss                                  x86_64 3.116.0-1.fc41                 updates      1.9 MiB
 nss-softokn                          x86_64 3.116.0-1.fc41                 updates      1.9 MiB
 nss-softokn-freebl                   x86_64 3.116.0-1.fc41                 updates    845.1 KiB
 nss-sysinit                          x86_64 3.116.0-1.fc41                 updates     22.2 KiB
 nss-util                             x86_64 3.116.0-1.fc41                 updates    205.1 KiB
 numactl-libs                         x86_64 2.0.19-1.fc41                  updates     61.0 KiB
 openblas                             x86_64 0.3.26-5.fc41                  fedora      96.0 KiB
 openblas-openmp                      x86_64 0.3.26-5.fc41                  fedora      39.4 MiB
 openblas-openmp64                    x86_64 0.3.26-5.fc41                  fedora      39.5 MiB
 openblas-serial                      x86_64 0.3.26-5.fc41                  fedora      37.9 MiB
 openjpeg                             x86_64 2.5.4-1.fc41                   updates    456.5 KiB
 openmpi                              x86_64 5.0.5-2.fc41                   fedora       7.0 MiB
 openssh                              x86_64 9.9p1-4.fc41                   updates      1.4 MiB
 openssh-clients                      x86_64 9.9p1-4.fc41                   updates      2.7 MiB
 openssl-devel                        x86_64 1:3.2.6-2.fc41                 updates      4.3 MiB
 orangefs                             x86_64 2.9.8-12.fc41                  fedora       3.1 MiB
 pango                                x86_64 1.56.3-1.fc41                  updates      1.0 MiB
 perl-AutoLoader                      noarch 5.74-517.fc41                  updates     20.5 KiB
 perl-B                               x86_64 1.89-517.fc41                  updates    498.0 KiB
 perl-Carp                            noarch 1.54-511.fc41                  fedora      46.6 KiB
 perl-Class-Struct                    noarch 0.68-517.fc41                  updates     25.4 KiB
 perl-Data-Dumper                     x86_64 2.189-512.fc41                 fedora     111.7 KiB
 perl-Digest                          noarch 1.20-511.fc41                  fedora      35.3 KiB
 perl-Digest-MD5                      x86_64 2.59-5.fc41                    fedora      59.8 KiB
 perl-DynaLoader                      x86_64 1.56-517.fc41                  updates     32.1 KiB
 perl-Encode                          x86_64 4:3.21-511.fc41                fedora       4.7 MiB
 perl-Errno                           x86_64 1.38-517.fc41                  updates      8.3 KiB
 perl-Exporter                        noarch 5.78-511.fc41                  fedora      54.3 KiB
 perl-Fcntl                           x86_64 1.18-517.fc41                  updates     49.0 KiB
 perl-File-Basename                   noarch 2.86-517.fc41                  updates     14.0 KiB
 perl-File-Path                       noarch 2.18-511.fc41                  fedora      63.5 KiB
 perl-File-Temp                       noarch 1:0.231.100-511.fc41           fedora     162.3 KiB
 perl-File-stat                       noarch 1.14-517.fc41                  updates     12.5 KiB
 perl-FileHandle                      noarch 2.05-517.fc41                  updates      9.3 KiB
 perl-Getopt-Long                     noarch 1:2.58-2.fc41                  fedora     144.5 KiB
 perl-Getopt-Std                      noarch 1.14-517.fc41                  updates     11.2 KiB
 perl-HTTP-Tiny                       noarch 0.090-1.fc41                   updates    154.4 KiB
 perl-IO                              x86_64 1.55-517.fc41                  updates    151.1 KiB
 perl-IO-Socket-IP                    noarch 0.43-1.fc41                    updates    100.3 KiB
 perl-IO-Socket-SSL                   noarch 2.089-1.fc41                   fedora     703.3 KiB
 perl-IPC-Open3                       noarch 1.22-517.fc41                  updates     22.5 KiB
 perl-MIME-Base32                     noarch 1.303-21.fc41                  fedora      30.7 KiB
 perl-MIME-Base64                     x86_64 3.16-511.fc41                  fedora      46.1 KiB
 perl-Net-SSLeay                      x86_64 1.94-7.fc41                    fedora       1.3 MiB
 perl-POSIX                           x86_64 2.20-517.fc41                  updates    235.1 KiB
 perl-PathTools                       x86_64 3.91-512.fc41                  updates    184.1 KiB
 perl-Pod-Escapes                     noarch 1:1.07-511.fc41                fedora      24.9 KiB
 perl-Pod-Perldoc                     noarch 3.28.01-512.fc41               fedora     163.7 KiB
 perl-Pod-Simple                      noarch 1:3.45-511.fc41                fedora     560.9 KiB
 perl-Pod-Usage                       noarch 4:2.03-511.fc41                fedora      84.8 KiB
 perl-Scalar-List-Utils               x86_64 5:1.68-1.fc41                  updates    148.9 KiB
 perl-SelectSaver                     noarch 1.02-517.fc41                  updates      2.2 KiB
 perl-Socket                          x86_64 4:2.038-511.fc41               fedora     124.0 KiB
 perl-Storable                        x86_64 1:3.32-511.fc41                fedora     232.4 KiB
 perl-Symbol                          noarch 1.09-517.fc41                  updates      6.8 KiB
 perl-Term-ANSIColor                  noarch 5.01-512.fc41                  fedora      97.5 KiB
 perl-Term-Cap                        noarch 1.18-511.fc41                  fedora      29.3 KiB
 perl-Text-ParseWords                 noarch 3.31-511.fc41                  fedora      13.6 KiB
 perl-Text-Tabs+Wrap                  noarch 2024.001-511.fc41              fedora      22.6 KiB
 perl-Time-Local                      noarch 2:1.350-511.fc41               fedora      69.0 KiB
 perl-URI                             noarch 5.30-1.fc41                    fedora     256.9 KiB
 perl-base                            noarch 2.27-517.fc41                  updates     12.5 KiB
 perl-constant                        noarch 1.33-512.fc41                  fedora      26.2 KiB
 perl-if                              noarch 0.61.000-517.fc41              updates      5.8 KiB
 perl-interpreter                     x86_64 4:5.40.3-517.fc41              updates    122.5 KiB
 perl-libnet                          noarch 3.15-512.fc41                  fedora     289.4 KiB
 perl-libs                            x86_64 4:5.40.3-517.fc41              updates      9.8 MiB
 perl-locale                          noarch 1.12-517.fc41                  updates      6.5 KiB
 perl-mro                             x86_64 1.29-517.fc41                  updates     45.6 KiB
 perl-overload                        noarch 1.37-517.fc41                  updates     71.5 KiB
 perl-overloading                     noarch 0.02-517.fc41                  updates      4.8 KiB
 perl-parent                          noarch 1:0.242-1.fc41                 fedora      10.0 KiB
 perl-podlators                       noarch 1:6.0.2-2.fc41                 fedora     317.5 KiB
 perl-vars                            noarch 1.05-517.fc41                  updates      3.9 KiB
 petsc-mpich                          x86_64 3.20.6-10.fc41                 fedora      21.3 MiB
 petsc-openmpi                        x86_64 3.20.6-10.fc41                 fedora      21.5 MiB
 pixman                               x86_64 0.44.2-1.fc41                  updates    664.5 KiB
 pmix                                 x86_64 4.2.8-3.fc41                   fedora       2.0 MiB
 poppler                              x86_64 24.08.0-3.fc41                 updates      3.6 MiB
 poppler-data                         noarch 0.4.11-8.fc41                  fedora      12.3 MiB
 poppler-glib                         x86_64 24.08.0-3.fc41                 updates    586.9 KiB
 procps-ng                            x86_64 4.0.4-4.fc41.1                 updates      1.1 MiB
 prrte                                x86_64 3.0.6-1.fc41                   updates    175.0 KiB
 prrte-libs                           x86_64 3.0.6-1.fc41                   updates      1.7 MiB
 ptscotch-mpich                       x86_64 7.0.4-5.fc41                   fedora       1.1 MiB
 ptscotch-mpich-devel                 x86_64 7.0.4-5.fc41                   fedora     132.3 KiB
 ptscotch-mpich-devel-parmetis        x86_64 7.0.4-5.fc41                   fedora      33.6 KiB
 ptscotch-openmpi                     x86_64 7.0.4-5.fc41                   fedora       1.1 MiB
 ptscotch-openmpi-devel               x86_64 7.0.4-5.fc41                   fedora     132.4 KiB
 publicsuffix-list                    noarch 20250616-1.fc41                updates    332.8 KiB
 pyproject-rpm-macros                 noarch 1.18.4-1.fc41                  updates    114.9 KiB
 python-pip-wheel                     noarch 24.2-3.fc41                    updates      1.2 MiB
 python-rpm-macros                    noarch 3.13-5.fc41                    updates     22.1 KiB
 python3-appdirs                      noarch 1.4.4-23.fc41                  fedora      68.7 KiB
 python3-babel                        noarch 2.17.0-1.fc41                  updates     30.2 MiB
 python3-blosc2                       x86_64 2.5.1-5.fc41                   fedora       1.0 MiB
 python3-brotli                       x86_64 1.1.0-5.fc41                   fedora     836.0 KiB
 python3-cairo                        x86_64 1.25.1-5.fc41                  fedora     492.5 KiB
 python3-certifi                      noarch 2023.05.07-7.fc41              fedora       6.6 KiB
 python3-cftime                       x86_64 1.6.4-1.fc41                   fedora     632.4 KiB
 python3-charset-normalizer           noarch 3.3.2-5.fc41                   fedora     314.8 KiB
 python3-contourpy                    x86_64 1.3.3-1.fc41                   updates    836.2 KiB
 python3-cpuinfo                      noarch 9.0.0-9.fc41                   fedora     309.7 KiB
 python3-cycler                       noarch 0.11.0-13.fc41                 fedora      37.6 KiB
 python3-dateutil                     noarch 1:2.8.2-16.fc41                fedora     879.2 KiB
 python3-docutils                     noarch 0.20.1-6.fc41                  fedora       4.8 MiB
 python3-fonttools                    x86_64 4.53.1-2.fc41                  fedora      18.2 MiB
 python3-fs                           noarch 2.4.16-9.fc41                  fedora       1.3 MiB
 python3-idna                         noarch 3.7-4.fc41                     fedora     595.8 KiB
 python3-imagesize                    noarch 1.4.1-9.fc41                   fedora      35.3 KiB
 python3-kiwisolver                   x86_64 1.4.9-1.fc41                   updates    154.0 KiB
 python3-libs                         x86_64 3.13.9-1.fc41                  updates     40.6 MiB
 python3-lxml                         x86_64 5.3.2-1.fc41                   updates      5.0 MiB
 python3-markupsafe                   x86_64 2.1.5-3.fc41                   fedora      57.5 KiB
 python3-matplotlib                   x86_64 3.9.4-2.fc41                   updates     21.2 MiB
 python3-matplotlib-data              noarch 3.9.4-2.fc41                   updates    741.5 KiB
 python3-matplotlib-data-fonts        noarch 3.9.4-2.fc41                   updates      7.9 MiB
 python3-matplotlib-tk                x86_64 3.9.4-2.fc41                   updates    262.5 KiB
 python3-mpmath                       noarch 1.3.0-10.fc41                  fedora       5.2 MiB
 python3-msgpack                      x86_64 1.0.7-5.fc41                   fedora     419.8 KiB
 python3-natsort                      noarch 8.4.0-2.fc41                   fedora     252.8 KiB
 python3-ndindex                      x86_64 1.7-13.fc41                    fedora       2.9 MiB
 python3-numexpr                      x86_64 2.8.5-7.fc41                   fedora     574.8 KiB
 python3-numpy-f2py                   x86_64 1:1.26.4-8.fc41                fedora       2.8 MiB
 python3-olefile                      noarch 0.47-5.fc41                    fedora     340.4 KiB
 python3-packaging                    noarch 24.2-3.fc41                    updates    558.3 KiB
 python3-pillow                       x86_64 11.0.0-1.fc41                  updates      4.0 MiB
 python3-pillow-tk                    x86_64 11.0.0-1.fc41                  updates     73.4 KiB
 python3-platformdirs                 noarch 4.2.2-2.fc41                   fedora     168.6 KiB
 python3-pooch                        noarch 1.8.2-3.fc41                   fedora     625.5 KiB
 python3-pygments                     noarch 2.18.0-2.fc41                  fedora      10.6 MiB
 python3-pyparsing                    noarch 3.1.2-7.fc41                   fedora       1.0 MiB
 python3-requests                     noarch 2.32.4-1.fc41                  updates    476.5 KiB
 python3-rpm-generators               noarch 14-11.fc41                     fedora      81.7 KiB
 python3-rpm-macros                   noarch 3.13-5.fc41                    updates      6.4 KiB
 python3-setuptools                   noarch 69.2.0-10.fc41                 updates      7.2 MiB
 python3-six                          noarch 1.16.0-23.fc41                 fedora     118.3 KiB
 python3-snowballstemmer              noarch 2.2.0-13.fc41                  fedora       1.7 MiB
 python3-sphinx-theme-alabaster       noarch 0.7.16-6.fc41                  fedora      41.9 KiB
 python3-sympy                        x86_64 1.13.3-1.fc41                  fedora      78.3 MiB
 python3-tkinter                      x86_64 3.13.9-1.fc41                  updates      2.0 MiB
 python3-typing-extensions            noarch 4.12.2-3.fc41                  fedora     464.5 KiB
 python3-urllib3                      noarch 1.26.20-1.fc41                 fedora       1.0 MiB
 rav1e-libs                           x86_64 0.7.1-8.fc41                   updates      3.0 MiB
 rhash                                x86_64 1.4.4-2.fc41                   fedora     349.9 KiB
 rpm-mpi-hooks                        noarch 8-10.fc41                      fedora       8.7 KiB
 rsvg-pixbuf-loader                   x86_64 2.59.2-1.fc41                  updates    330.6 KiB
 scalapack-common                     x86_64 2.2.0-10.fc41                  fedora      26.8 KiB
 scalapack-mpich                      x86_64 2.2.0-10.fc41                  fedora       5.5 MiB
 scalapack-openmpi                    x86_64 2.2.0-10.fc41                  fedora       5.5 MiB
 shared-mime-info                     x86_64 2.3-6.fc41                     fedora       5.2 MiB
 snappy                               x86_64 1.2.1-2.fc41                   fedora      71.1 KiB
 suitesparse                          x86_64 7.7.0-2.fc41                   fedora     139.9 MiB
 suitesparse64                        x86_64 7.7.0-2.fc41                   fedora     139.9 MiB
 sundials                             x86_64 6.7.0-4.fc41                   fedora       6.8 MiB
 sundials-mpich                       x86_64 6.7.0-4.fc41                   fedora       7.5 MiB
 sundials-openmpi                     x86_64 6.7.0-4.fc41                   fedora       7.5 MiB
 superlu_dist-mpich                   x86_64 1:8.2.0-4.fc41                 fedora       1.4 MiB
 superlu_dist-mpich-devel             x86_64 1:8.2.0-4.fc41                 fedora     461.5 KiB
 superlu_dist-openmpi                 x86_64 1:8.2.0-4.fc41                 fedora       1.4 MiB
 superlu_dist-openmpi-devel           x86_64 1:8.2.0-4.fc41                 fedora     461.9 KiB
 svt-av1-libs                         x86_64 2.3.0-1.fc41                   updates      5.6 MiB
 systemd                              x86_64 256.17-1.fc41                  updates     16.4 MiB
 systemd-pam                          x86_64 256.17-1.fc41                  updates      1.1 MiB
 systemd-rpm-macros                   noarch 256.17-1.fc41                  updates     10.7 KiB
 tcl                                  x86_64 1:8.6.14-5.fc41                updates      4.2 MiB
 tcsh                                 x86_64 6.24.13-1.fc41                 fedora       1.2 MiB
 tk                                   x86_64 1:8.6.14-2.fc41                fedora       3.6 MiB
 torque-libs                          x86_64 6.1.3-13.fc41                  updates    454.1 KiB
 tpm2-tss                             x86_64 4.1.3-3.fc41                   fedora       1.6 MiB
 tzdata                               noarch 2025b-1.fc41                   updates      1.6 MiB
 ucx                                  x86_64 1.17.0-3.fc41                  updates      2.4 MiB
 urw-base35-bookman-fonts             noarch 20200910-23.fc41               fedora       1.4 MiB
 urw-base35-c059-fonts                noarch 20200910-23.fc41               fedora       1.4 MiB
 urw-base35-d050000l-fonts            noarch 20200910-23.fc41               fedora      84.3 KiB
 urw-base35-fonts                     noarch 20200910-23.fc41               fedora       5.3 KiB
 urw-base35-fonts-common              noarch 20200910-23.fc41               fedora      37.4 KiB
 urw-base35-gothic-fonts              noarch 20200910-23.fc41               fedora       1.2 MiB
 urw-base35-nimbus-mono-ps-fonts      noarch 20200910-23.fc41               fedora       1.0 MiB
 urw-base35-nimbus-roman-fonts        noarch 20200910-23.fc41               fedora       1.4 MiB
 urw-base35-nimbus-sans-fonts         noarch 20200910-23.fc41               fedora       2.4 MiB
 urw-base35-p052-fonts                noarch 20200910-23.fc41               fedora       1.5 MiB
 urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41               fedora      64.9 KiB
 urw-base35-z003-fonts                noarch 20200910-23.fc41               fedora     390.8 KiB
 vim-filesystem                       noarch 2:9.1.1863-1.fc41              updates     40.0   B
 xapian-core-libs                     x86_64 1.4.26-1.fc41                  fedora       2.1 MiB
 xml-common                           noarch 0.6.3-65.fc41                  fedora      78.4 KiB
 yaksa                                x86_64 0.3-6.fc41                     fedora      44.9 MiB
 zlib-ng                              x86_64 2.2.3-2.fc41                   updates    161.2 KiB

Transaction Summary:
 Installing:       390 packages

Total size of inbound packages is 432 MiB. Need to download 432 MiB.
After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B).
[  1/390] chrpath-0:0.16-24.fc41.x86_64 100% |   2.4 MiB/s |  30.1 KiB |  00m00s
[  2/390] m4-0:1.4.19-10.fc41.x86_64    100% |  16.6 MiB/s | 305.4 KiB |  00m00s
[  3/390] make-1:4.4.1-8.fc41.x86_64    100% |  71.5 MiB/s | 586.1 KiB |  00m00s
[  4/390] environment-modules-0:5.4.0-2 100% |  25.5 MiB/s | 731.3 KiB |  00m00s
[  5/390] openmpi-devel-0:5.0.5-2.fc41. 100% | 100.8 MiB/s |   2.3 MiB |  00m00s
[  6/390] python3-boutdata-0:0.2.1-7.fc 100% |   2.6 MiB/s | 157.4 KiB |  00m00s
[  7/390] python3-boututils-0:0.2.1-6.f 100% |   2.1 MiB/s | 166.8 KiB |  00m00s
[  8/390] python3-cython-0:3.0.11-1.fc4 100% |  59.4 MiB/s |   3.9 MiB |  00m00s
[  9/390] petsc-openmpi-devel-0:3.20.6- 100% |  42.1 MiB/s |   7.1 MiB |  00m00s
[ 10/390] python3-numpy-1:1.26.4-8.fc41 100% | 131.4 MiB/s |   7.6 MiB |  00m00s
[ 11/390] python3-sphinx-1:7.3.7-2.fc41 100% | 101.2 MiB/s |   2.6 MiB |  00m00s
[ 12/390] python3-netcdf4-0:1.7.1-2.fc4 100% |   5.1 MiB/s | 655.1 KiB |  00m00s
[ 13/390] python3-zoidberg-0:0.1.1-7.fc 100% |   2.1 MiB/s | 125.2 KiB |  00m00s
[ 14/390] python3-tables-0:3.10.1-1.fc4 100% |  14.0 MiB/s |   1.7 MiB |  00m00s
[ 15/390] cmake-0:3.30.8-1.fc41.x86_64  100% | 155.3 MiB/s |  10.9 MiB |  00m00s
[ 16/390] fftw-devel-0:3.3.10-13.fc41.x 100% |   5.3 MiB/s | 134.5 KiB |  00m00s
[ 17/390] flexiblas-devel-0:3.4.5-1.fc4 100% |   3.9 MiB/s | 122.9 KiB |  00m00s
[ 18/390] fmt-devel-0:11.0.2-2.fc41.x86 100% |  31.6 MiB/s | 129.6 KiB |  00m00s
[ 19/390] gcc-c++-0:14.3.1-4.fc41.x86_6 100% | 278.2 MiB/s |  14.2 MiB |  00m00s
[ 20/390] gettext-devel-0:0.22.5-6.fc41 100% |  58.3 MiB/s | 238.6 KiB |  00m00s
[ 21/390] hdf5-devel-0:1.12.1-21.fc41.x 100% |  74.8 MiB/s |   1.3 MiB |  00m00s
[ 22/390] sundials-openmpi-devel-0:6.7. 100% |   4.1 MiB/s |   1.0 MiB |  00m00s
[ 23/390] doxygen-2:1.12.0-2.fc41.x86_6 100% |  33.6 MiB/s |   5.5 MiB |  00m00s
[ 24/390] mpark-variant-devel-0:1.4.0-1 100% |   1.0 MiB/s |  27.5 KiB |  00m00s
[ 25/390] mpich-devel-0:4.2.2-1.fc41.x8 100% |  27.7 MiB/s |   1.6 MiB |  00m00s
[ 26/390] hdf5-mpich-devel-0:1.12.1-21. 100% |   9.9 MiB/s |   1.3 MiB |  00m00s
[ 27/390] hdf5-openmpi-devel-0:1.12.1-2 100% |   9.7 MiB/s |   1.3 MiB |  00m00s
[ 28/390] netcdf-devel-0:4.9.2-6.fc41.x 100% |   9.7 MiB/s |  99.2 KiB |  00m00s
[ 29/390] python3-0:3.13.9-1.fc41.x86_6 100% |  30.2 MiB/s |  30.9 KiB |  00m00s
[ 30/390] python3-devel-0:3.13.9-1.fc41 100% | 132.5 MiB/s | 407.0 KiB |  00m00s
[ 31/390] python3-jinja2-0:3.1.6-1.fc41 100% | 120.7 MiB/s | 494.2 KiB |  00m00s
[ 32/390] netcdf-cxx4-devel-0:4.3.1-13. 100% |   1.2 MiB/s |  73.1 KiB |  00m00s
[ 33/390] python3-scipy-0:1.11.3-16.fc4 100% | 183.0 MiB/s |  16.1 MiB |  00m00s
[ 34/390] petsc-mpich-devel-0:3.20.6-10 100% |  45.7 MiB/s |   6.7 MiB |  00m00s
[ 35/390] sundials-devel-0:6.7.0-4.fc41 100% |   7.2 MiB/s | 954.8 KiB |  00m00s
[ 36/390] zlib-ng-compat-devel-0:2.2.3- 100% |  12.5 MiB/s |  38.3 KiB |  00m00s
[ 37/390] man-db-0:2.12.1-2.fc41.x86_64 100% | 130.5 MiB/s |   1.3 MiB |  00m00s
[ 38/390] pmix-0:4.2.8-3.fc41.x86_64    100% |  59.4 MiB/s | 668.9 KiB |  00m00s
[ 39/390] openmpi-0:5.0.5-2.fc41.x86_64 100% |  84.4 MiB/s |   2.0 MiB |  00m00s
[ 40/390] rpm-mpi-hooks-0:8-10.fc41.noa 100% |   2.1 MiB/s |  10.7 KiB |  00m00s
[ 41/390] sundials-mpich-devel-0:6.7.0- 100% |  10.0 MiB/s |   1.0 MiB |  00m00s
[ 42/390] python3-natsort-0:8.4.0-2.fc4 100% |   2.1 MiB/s |  81.3 KiB |  00m00s
[ 43/390] netcdf-0:4.9.2-6.fc41.x86_64  100% | 101.7 MiB/s | 833.0 KiB |  00m00s
[ 44/390] python3-certifi-0:2023.05.07- 100% |   1.6 MiB/s |  14.4 KiB |  00m00s
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[378/390] perl-File-stat-0:1.14-517.fc4 100% |   2.3 MiB/s |  16.7 KiB |  00m00s
[379/390] perl-FileHandle-0:2.05-517.fc 100% |   7.4 MiB/s |  15.1 KiB |  00m00s
[380/390] perl-Class-Struct-0:0.68-517. 100% |   7.1 MiB/s |  21.7 KiB |  00m00s
[381/390] hdf-libs-0:4.2.16.2-2.fc41.x8 100% |  56.1 MiB/s | 287.4 KiB |  00m00s
[382/390] gcc-plugin-annobin-0:14.3.1-4 100% |  33.0 MiB/s |  67.6 KiB |  00m00s
[383/390] annobin-plugin-gcc-0:12.69-1. 100% | 158.0 MiB/s | 971.0 KiB |  00m00s
[384/390] systemd-rpm-macros-0:256.17-1 100% |  10.0 MiB/s |  30.7 KiB |  00m00s
[385/390] annobin-docs-0:12.69-1.fc41.n 100% |  22.4 MiB/s |  91.8 KiB |  00m00s
[386/390] pyproject-rpm-macros-0:1.18.4 100% |  21.9 MiB/s |  44.8 KiB |  00m00s
[387/390] python-rpm-macros-0:3.13-5.fc 100% |   8.0 MiB/s |  16.4 KiB |  00m00s
[388/390] python3-rpm-generators-0:14-1 100% |  14.3 MiB/s |  29.3 KiB |  00m00s
[389/390] cmake-rpm-macros-0:3.30.8-1.f 100% |   7.9 MiB/s |  16.3 KiB |  00m00s
[390/390] python3-rpm-macros-0:3.13-5.f 100% |   3.6 MiB/s |  11.2 KiB |  00m00s
--------------------------------------------------------------------------------
[390/390] Total                         100% | 138.8 MiB/s | 431.7 MiB |  00m03s
Running transaction
[  1/392] Verify package files          100% | 327.0   B/s | 390.0   B |  00m01s
[  2/392] Prepare transaction           100% |   2.0 KiB/s | 390.0   B |  00m00s
[  3/392] Installing libgfortran-0:14.3 100% | 380.0 MiB/s |   3.0 MiB |  00m00s
[  4/392] Installing libjpeg-turbo-0:3. 100% | 380.2 MiB/s | 778.7 KiB |  00m00s
[  5/392] Installing libquadmath-0:14.3 100% | 319.4 MiB/s | 327.1 KiB |  00m00s
[  6/392] Installing cmake-filesystem-0 100% |   7.1 MiB/s |   7.3 KiB |  00m00s
[  7/392] Installing nspr-0:4.37.0-3.fc 100% | 314.7 MiB/s | 322.3 KiB |  00m00s
[  8/392] Installing hwloc-libs-0:2.12. 100% | 576.4 MiB/s |   2.9 MiB |  00m00s
[  9/392] Installing libpng-2:1.6.40-4. 100% | 241.3 MiB/s | 247.1 KiB |  00m00s
[ 10/392] Installing fonts-filesystem-1 100% |   0.0   B/s | 788.0   B |  00m00s
[ 11/392] Installing urw-base35-fonts-c 100% |   0.0   B/s |  38.4 KiB |  00m00s
[ 12/392] Installing metis-0:5.1.0.3-6. 100% | 322.2 MiB/s | 989.8 KiB |  00m00s
[ 13/392] Installing libgpg-error-0:1.5 100% | 291.5 MiB/s | 895.4 KiB |  00m00s
[ 14/392] Installing expat-0:2.7.2-1.fc 100% | 301.6 MiB/s | 308.9 KiB |  00m00s
[ 15/392] Installing libaec-0:1.1.3-1.f 100% |  98.1 MiB/s | 100.5 KiB |  00m00s
[ 16/392] Installing nss-util-0:3.116.0 100% | 201.3 MiB/s | 206.1 KiB |  00m00s
[ 17/392] Installing zlib-ng-compat-dev 100% | 106.0 MiB/s | 108.5 KiB |  00m00s
[ 18/392] Installing libwebp-0:1.5.0-1. 100% | 399.7 MiB/s | 818.6 KiB |  00m00s
[ 19/392] Installing libmpc-0:1.3.1-6.f 100% | 162.3 MiB/s | 166.2 KiB |  00m00s
[ 20/392] Installing libaec-devel-0:1.1 100% |   0.0   B/s |  13.5 KiB |  00m00s
[ 21/392] Installing hdf5-0:1.12.1-21.f 100% | 395.0 MiB/s |   7.9 MiB |  00m00s
[ 22/392] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB |  00m00s
[ 23/392] Installing python-rpm-macros- 100% |   0.0   B/s |  22.8 KiB |  00m00s
[ 24/392] Installing openjpeg-0:2.5.4-1 100% | 223.8 MiB/s | 458.4 KiB |  00m00s
[ 25/392] Installing tcl-1:8.6.14-5.fc4 100% | 353.0 MiB/s |   4.2 MiB |  00m00s
[ 26/392] Installing lcms2-0:2.16-4.fc4 100% | 208.3 MiB/s | 426.5 KiB |  00m00s
[ 27/392] Installing libnl3-0:3.11.0-1. 100% | 349.2 MiB/s |   1.0 MiB |  00m00s
[ 28/392] Installing libibverbs-0:51.0- 100% | 302.4 MiB/s |   1.2 MiB |  00m00s
[ 29/392] Installing openblas-0:0.3.26- 100% |   0.0   B/s |  97.8 KiB |  00m00s
[ 30/392] Installing munge-libs-0:0.5.1 100% |   0.0   B/s |  32.9 KiB |  00m00s
[ 31/392] Installing pmix-0:4.2.8-3.fc4 100% | 403.2 MiB/s |   2.0 MiB |  00m00s
[ 32/392] Installing python3-rpm-macros 100% |   0.0   B/s |   6.7 KiB |  00m00s
[ 33/392] Installing scalapack-common-0 100% |   0.0   B/s |  28.3 KiB |  00m00s
[ 34/392] Installing fftw-libs-quad-0:3 100% | 422.2 MiB/s |   2.5 MiB |  00m00s
[ 35/392] Installing python3-matplotlib 100% | 439.5 MiB/s |   7.9 MiB |  00m00s
[ 36/392] Installing python3-matplotlib 100% | 247.0 MiB/s | 758.7 KiB |  00m00s
[ 37/392] Installing libICE-0:1.1.2-1.f 100% | 192.9 MiB/s | 197.6 KiB |  00m00s
[ 38/392] Installing adobe-mappings-cma 100% | 460.3 MiB/s |  15.2 MiB |  00m00s
[ 39/392] Installing fribidi-0:1.0.15-2 100% | 362.2 MiB/s | 370.9 KiB |  00m00s
[ 40/392] Installing numactl-libs-0:2.0 100% |   0.0   B/s |  61.8 KiB |  00m00s
[ 41/392] Installing libpsm2-0:11.2.230 100% | 433.2 MiB/s | 443.6 KiB |  00m00s
[ 42/392] Installing less-0:679-1.fc41. 100% | 206.0 MiB/s | 421.9 KiB |  00m00s
[ 43/392] Installing vim-filesystem-2:9 100% |   0.0   B/s |   4.7 KiB |  00m00s
[ 44/392] Installing libimagequant-0:4. 100% | 130.5 MiB/s | 668.3 KiB |  00m00s
[ 45/392] Installing tzdata-0:2025b-1.f 100% |  70.1 MiB/s |   1.9 MiB |  00m00s
[ 46/392] Installing MUMPS-common-0:5.6 100% | 926.7 MiB/s | 949.0 KiB |  00m00s
[ 47/392] Installing libtextstyle-0:0.2 100% | 191.9 MiB/s | 196.5 KiB |  00m00s
[ 48/392] Installing gettext-libs-0:0.2 100% | 335.3 MiB/s |   1.7 MiB |  00m00s
[ 49/392] Installing fftw-libs-single-0 100% | 452.9 MiB/s |   3.6 MiB |  00m00s
[ 50/392] Installing fftw-libs-long-0:3 100% | 388.1 MiB/s |   1.6 MiB |  00m00s
[ 51/392] Installing fftw-libs-double-0 100% | 228.8 MiB/s |   3.4 MiB |  00m00s
[ 52/392] Installing groff-base-0:1.23. 100% | 215.2 MiB/s |   3.9 MiB |  00m00s
[ 53/392] Installing jsoncpp-0:1.9.5-8. 100% | 249.0 MiB/s | 254.9 KiB |  00m00s
[ 54/392] Installing make-1:4.4.1-8.fc4 100% | 360.0 MiB/s |   1.8 MiB |  00m00s
[ 55/392] Installing fftw-0:3.3.10-13.f 100% | 181.2 MiB/s | 185.5 KiB |  00m00s
[ 56/392] Installing fftw-libs-0:3.3.10 100% |   0.0   B/s | 124.0   B |  00m00s
[ 57/392] Installing adobe-mappings-cma 100% | 285.7 MiB/s | 585.2 KiB |  00m00s
[ 58/392] Installing libSM-0:1.2.5-1.fc 100% |  98.6 MiB/s | 100.9 KiB |  00m00s
[ 59/392] Installing pyproject-rpm-macr 100% | 114.1 MiB/s | 116.8 KiB |  00m00s
[ 60/392] Installing openblas-serial-0: 100% | 653.5 MiB/s |  37.9 MiB |  00m00s
[ 61/392] Installing suitesparse64-0:7. 100% | 624.8 MiB/s | 140.0 MiB |  00m00s
[ 62/392] Installing openblas-openmp-0: 100% | 667.3 MiB/s |  39.4 MiB |  00m00s
[ 63/392] Installing flexiblas-netlib-0 100% | 452.3 MiB/s |  10.9 MiB |  00m00s
[ 64/392] Installing flexiblas-0:3.4.5- 100% |   0.0   B/s |  51.6 KiB |  00m00s
[ 65/392] Installing flexiblas-openblas 100% |  43.1 MiB/s |  44.1 KiB |  00m00s
[ 66/392] Installing suitesparse-0:7.7. 100% | 624.8 MiB/s | 140.0 MiB |  00m00s
[ 67/392] Installing openblas-openmp64- 100% | 670.0 MiB/s |  39.5 MiB |  00m00s
[ 68/392] Installing flexiblas-netlib64 100% | 475.5 MiB/s |  10.9 MiB |  00m00s
[ 69/392] Installing flexiblas-openblas 100% |   0.0   B/s |  44.2 KiB |  00m00s
[ 70/392] Installing librdmacm-0:51.0-5 100% | 152.5 MiB/s | 156.2 KiB |  00m00s
[ 71/392] Installing libfabric-0:1.22.0 100% | 469.5 MiB/s |   5.2 MiB |  00m00s
[ 72/392] Installing cpp-0:14.3.1-4.fc4 100% | 437.5 MiB/s |  35.0 MiB |  00m00s
[ 73/392] Installing nss-softokn-freebl 100% | 275.8 MiB/s | 847.3 KiB |  00m00s
[ 74/392] Installing nss-softokn-0:3.11 100% | 486.6 MiB/s |   1.9 MiB |  00m00s
[ 75/392] Installing nss-0:3.116.0-1.fc 100% | 188.6 MiB/s |   1.9 MiB |  00m00s
[ 76/392] Installing nss-sysinit-0:3.11 100% |  22.6 MiB/s |  23.2 KiB |  00m00s
[ 77/392] Installing graphviz-libs-0:12 100% | 302.0 MiB/s |   1.2 MiB |  00m00s
[ 78/392] Installing libgcrypt-0:1.11.0 100% | 385.5 MiB/s |   1.5 MiB |  00m00s
[ 79/392] Installing libksba-0:1.6.7-2. 100% | 391.6 MiB/s | 401.0 KiB |  00m00s
[ 80/392] Installing urw-base35-bookman 100% | 136.5 MiB/s |   1.4 MiB |  00m00s
[ 81/392] Installing urw-base35-c059-fo 100% | 199.3 MiB/s |   1.4 MiB |  00m00s
[ 82/392] Installing urw-base35-d050000 100% |  20.8 MiB/s |  85.4 KiB |  00m00s
[ 83/392] Installing urw-base35-gothic- 100% | 166.1 MiB/s |   1.2 MiB |  00m00s
[ 84/392] Installing urw-base35-nimbus- 100% | 150.3 MiB/s |   1.1 MiB |  00m00s
[ 85/392] Installing urw-base35-nimbus- 100% | 195.1 MiB/s |   1.4 MiB |  00m00s
[ 86/392] Installing urw-base35-nimbus- 100% | 239.4 MiB/s |   2.4 MiB |  00m00s
[ 87/392] Installing urw-base35-p052-fo 100% | 185.9 MiB/s |   1.5 MiB |  00m00s
[ 88/392] Installing urw-base35-standar 100% |  12.9 MiB/s |  66.0 KiB |  00m00s
[ 89/392] Installing urw-base35-z003-fo 100% |  76.5 MiB/s | 391.8 KiB |  00m00s
[ 90/392] Installing urw-base35-fonts-0 100% |   0.0   B/s |   5.6 KiB |  00m00s
[ 91/392] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB |  00m00s
[ 92/392] Installing dejavu-sans-fonts- 100% | 459.1 MiB/s |   5.5 MiB |  00m00s
[ 93/392] Installing google-droid-sans- 100% | 417.3 MiB/s |   6.3 MiB |  00m00s
[ 94/392] Installing libssh-devel-0:0.1 100% | 176.3 MiB/s | 180.6 KiB |  00m00s
[ 95/392] Installing libyuv-0:0-0.55.20 100% | 332.4 MiB/s | 680.7 KiB |  00m00s
[ 96/392] Installing hdf-libs-0:4.2.16. 100% | 338.2 MiB/s | 692.7 KiB |  00m00s
[ 97/392] Installing annobin-docs-0:12. 100% |   0.0   B/s |  98.8 KiB |  00m00s
[ 98/392] Installing dbus-common-1:1.14 100% | 903.4 KiB/s |  13.6 KiB |  00m00s
[ 99/392] Installing dbus-broker-0:36-5 100% |  54.3 MiB/s | 389.2 KiB |  00m00s
[100/392] Installing dbus-1:1.14.10-4.f 100% |   0.0   B/s | 124.0   B |  00m00s
[101/392] Installing publicsuffix-list- 100% | 326.0 MiB/s | 333.8 KiB |  00m00s
[102/392] Installing libpsl-devel-0:0.2 100% | 110.9 MiB/s | 113.6 KiB |  00m00s
[103/392] Installing libseccomp-0:2.5.5 100% | 171.1 MiB/s | 175.2 KiB |  00m00s
[104/392] Installing systemd-pam-0:256. 100% | 217.0 MiB/s |   1.1 MiB |  00m00s
[105/392] Installing systemd-0:256.17-1 100% | 133.7 MiB/s |  16.6 MiB |  00m00s
>>> Running %post scriptlet: systemd-0:256.17-1.fc41.x86_64                     
>>> Finished %post scriptlet: systemd-0:256.17-1.fc41.x86_64                    
>>> Scriptlet output:                                                           
>>> Creating group 'systemd-journal' with GID 190.                              
>>> Creating group 'systemd-oom' with GID 999.                                  
>>> Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and 
>>>                                                                             
[106/392] Installing logrotate-0:3.22.0 100% |   7.2 MiB/s | 155.7 KiB |  00m00s
>>> Running %post scriptlet: logrotate-0:3.22.0-2.fc41.x86_64                   
>>> Finished %post scriptlet: logrotate-0:3.22.0-2.fc41.x86_64                  
>>> Scriptlet output:                                                           
>>> Created symlink '/etc/systemd/system/timers.target.wants/logrotate.timer' → 
>>>                                                                             
[107/392] Installing munge-0:0.5.16-3.f 100% |  26.5 MiB/s | 352.4 KiB |  00m00s
[108/392] Installing torque-libs-0:6.1. 100% | 222.2 MiB/s | 455.0 KiB |  00m00s
[109/392] Installing prrte-libs-0:3.0.6 100% | 281.3 MiB/s |   1.7 MiB |  00m00s
[110/392] Installing prrte-0:3.0.6-1.fc 100% | 174.7 MiB/s | 178.9 KiB |  00m00s
[111/392] Installing zlib-ng-0:2.2.3-2. 100% | 158.8 MiB/s | 162.6 KiB |  00m00s
[112/392] Installing blosc2-0:2.15.2-1. 100% | 268.9 MiB/s | 550.8 KiB |  00m00s
[113/392] Installing pixman-0:0.44.2-1. 100% | 162.5 MiB/s | 665.6 KiB |  00m00s
[114/392] Installing kernel-headers-0:6 100% | 221.8 MiB/s |   6.9 MiB |  00m00s
[115/392] Installing libxcrypt-devel-0: 100% |  16.2 MiB/s |  33.1 KiB |  00m00s
[116/392] Installing glibc-devel-0:2.40 100% | 178.8 MiB/s |   2.3 MiB |  00m00s
[117/392] Installing gcc-0:14.3.1-4.fc4 100% | 457.8 MiB/s | 104.4 MiB |  00m00s
[118/392] Installing libquadmath-devel- 100% |  23.0 MiB/s |  23.5 KiB |  00m00s
[119/392] Installing gcc-gfortran-0:14. 100% | 418.5 MiB/s |  37.2 MiB |  00m00s
[120/392] Installing hdf5-devel-0:1.12. 100% | 389.4 MiB/s |   3.9 MiB |  00m00s
[121/392] Installing cpuinfo-0:23.11.04 100% | 114.0 MiB/s | 116.7 KiB |  00m00s
[122/392] Installing svt-av1-libs-0:2.3 100% | 431.8 MiB/s |   5.6 MiB |  00m00s
[123/392] Installing rav1e-libs-0:0.7.1 100% | 427.4 MiB/s |   3.0 MiB |  00m00s
[124/392] Installing libdav1d-0:1.5.1-1 100% | 421.5 MiB/s |   1.7 MiB |  00m00s
[125/392] Installing libvmaf-0:3.0.0-2. 100% | 402.5 MiB/s | 824.4 KiB |  00m00s
[126/392] Installing libaom-0:3.13.1-1. 100% | 455.0 MiB/s |   5.0 MiB |  00m00s
[127/392] Installing libavif-0:1.1.1-1. 100% |  30.0 MiB/s | 215.3 KiB |  00m00s
[128/392] Installing openssl-devel-1:3. 100% |  75.3 MiB/s |   5.2 MiB |  00m00s
[129/392] Installing libnghttp2-devel-0 100% | 289.4 MiB/s | 296.3 KiB |  00m00s
[130/392] Installing libidn2-devel-0:2. 100% | 152.2 MiB/s | 155.8 KiB |  00m00s
[131/392] Installing brotli-0:1.1.0-5.f 100% |   0.0   B/s |  32.5 KiB |  00m00s
[132/392] Installing brotli-devel-0:1.1 100% |  33.2 MiB/s |  68.0 KiB |  00m00s
[133/392] Installing libcurl-devel-0:8. 100% | 122.7 MiB/s |   1.4 MiB |  00m00s
[134/392] Installing dbus-libs-1:1.14.1 100% | 361.4 MiB/s | 370.0 KiB |  00m00s
[135/392] Installing avahi-libs-0:0.8-2 100% | 164.9 MiB/s | 168.9 KiB |  00m00s
[136/392] Installing cups-filesystem-1: 100% |   0.0   B/s |   1.8 KiB |  00m00s
[137/392] Installing liblerc-0:4.0.0-8. 100% | 297.4 MiB/s | 609.0 KiB |  00m00s
[138/392] Installing libedit-0:3.1-55.2 100% | 240.2 MiB/s | 245.9 KiB |  00m00s
[139/392] Installing ncurses-0:6.5-2.20 100% | 309.5 MiB/s | 633.9 KiB |  00m00s
[140/392] Installing perl-Digest-0:1.20 100% |   0.0   B/s |  37.1 KiB |  00m00s
[141/392] Installing perl-Digest-MD5-0: 100% |  60.2 MiB/s |  61.7 KiB |  00m00s
[142/392] Installing perl-B-0:1.89-517. 100% | 244.8 MiB/s | 501.4 KiB |  00m00s
[143/392] Installing perl-FileHandle-0: 100% |   0.0   B/s |   9.8 KiB |  00m00s
[144/392] Installing perl-MIME-Base32-0 100% |   0.0   B/s |  32.2 KiB |  00m00s
[145/392] Installing perl-Data-Dumper-0 100% | 110.9 MiB/s | 113.6 KiB |  00m00s
[146/392] Installing perl-libnet-0:3.15 100% | 287.8 MiB/s | 294.7 KiB |  00m00s
[147/392] Installing perl-AutoLoader-0: 100% |   0.0   B/s |  20.9 KiB |  00m00s
[148/392] Installing perl-IO-Socket-IP- 100% |  99.8 MiB/s | 102.2 KiB |  00m00s
[149/392] Installing perl-URI-0:5.30-1. 100% |  43.9 MiB/s | 269.5 KiB |  00m00s
[150/392] Installing perl-Text-Tabs+Wra 100% |   0.0   B/s |  23.9 KiB |  00m00s
[151/392] Installing perl-Pod-Escapes-1 100% |   0.0   B/s |  25.9 KiB |  00m00s
[152/392] Installing perl-File-Path-0:2 100% |   0.0   B/s |  64.5 KiB |  00m00s
[153/392] Installing perl-if-0:0.61.000 100% |   0.0   B/s |   6.2 KiB |  00m00s
[154/392] Installing perl-Time-Local-2: 100% |  68.9 MiB/s |  70.6 KiB |  00m00s
[155/392] Installing perl-Net-SSLeay-0: 100% | 340.6 MiB/s |   1.4 MiB |  00m00s
[156/392] Installing perl-locale-0:1.12 100% |   0.0   B/s |   6.9 KiB |  00m00s
[157/392] Installing perl-IO-Socket-SSL 100% | 345.4 MiB/s | 707.4 KiB |  00m00s
[158/392] Installing perl-Term-ANSIColo 100% |  96.9 MiB/s |  99.2 KiB |  00m00s
[159/392] Installing perl-Term-Cap-0:1. 100% |   0.0   B/s |  30.6 KiB |  00m00s
[160/392] Installing perl-POSIX-0:2.20- 100% | 230.9 MiB/s | 236.4 KiB |  00m00s
[161/392] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.1 KiB |  00m00s
[162/392] Installing perl-IPC-Open3-0:1 100% |   0.0   B/s |  23.3 KiB |  00m00s
[163/392] Installing perl-Class-Struct- 100% |   0.0   B/s |  25.9 KiB |  00m00s
[164/392] Installing perl-HTTP-Tiny-0:0 100% | 152.8 MiB/s | 156.4 KiB |  00m00s
[165/392] Installing perl-Pod-Simple-1: 100% | 278.5 MiB/s | 570.5 KiB |  00m00s
[166/392] Installing perl-Socket-4:2.03 100% | 123.1 MiB/s | 126.1 KiB |  00m00s
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[363/392] Installing netcdf-cxx4-0:4.3. 100% | 310.7 MiB/s | 318.2 KiB |  00m00s
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[370/392] Installing lzo-0:2.10-13.fc41 100% |  82.3 MiB/s | 168.5 KiB |  00m00s
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Complete!
Finish: build setup for bout++-5.2.0-1.fc41.src.rpm
Start: rpmbuild bout++-5.2.0-1.fc41.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1761696000
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.jhkokR
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.TIWBB6
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ rm -rf BOUT++-v5.2.0
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.2.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd BOUT++-v5.2.0
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/3188.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py
+ rm -rf externalpackages/mpark.variant/
+ mkdir -p externalpackages/mpark.variant/include/
+ rm -rf tools/pylib/boutdata
+ rm -rf tools/pylib/boututils
++ find -L tools/pylib/ -type f
++ grep -v _boutcore_build
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/.gitignore
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.2IdiFP
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.2.0
+ export CC=mpicc
+ CC=mpicc
+ export CXX=mpicxx
+ CXX=mpicxx
+ for mpi in openmpi mpich
+ mkdir build_openmpi
+ for mpi in openmpi mpich
+ mkdir build_mpich
+ for mpi in openmpi mpich
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
CMAKE_PREFIX_PATH=/usr/lib64/openmpi; export CMAKE_PREFIX_PATH;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi
++ export CMAKE_PREFIX_PATH
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/sbin -DCMAKE_INSTALL_SBINDIR:PATH=sbin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi -DBOUT_TEST_TIMEOUT=900 -DBOUT_ENABLE_METRIC_3D=ON -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON
-- Configuring BOUT++ version 5.2.1
-- The CXX compiler identification is GNU 14.3.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python3: /usr/bin/python3.13 (found version "3.13.9") found components: Interpreter
-- Could NOT find ClangFormat (missing: ClangFormat_BIN) 
CMake Warning (dev) at CMakeLists.txt:397 (message):
  'src/field/generated_fieldops.cxx' will not be regenerated when you make
  changes to either 'src/field/gen_fieldops.py' or
  'src/field/gen_fieldops.jinja'.  This is because either Python3 or
  clang-format is missing (see above messages for more information) or
  BOUT_GENERATE_FIELDOPS is OFF (current value: OFF).  This warning is only
  important for BOUT++ developers and can otherwise be safely ignored.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python3: /usr/bin/python3.13 (found suitable version "3.13.9", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed
-- Found Numpy: /usr/include (found version "1.26.4")
-- Found Cython: TRUE (found version "3.0.11")
-- Found Bash: /usr/bin/bash (found version "5.2.32")
-- Building BOUT++ Python interface
-- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Enable OpenMP: OFF
-- HYPRE support: OFF
-- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0")
-- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0'
-- Found PETSc: /usr/include/openmpi-x86_64/petsc
-- PETSc support: ON
-- Using external mpark.variant
-- Using external fmt
-- PVODE support: ON
-- The C compiler identification is GNU 14.3.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.2")
-- Found netCDFCxx version 4.3.1
-- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1")
-- NetCDF support: ON
-- ADIOS2 support: OFF
-- Found FFTW: /usr/lib64/libfftw3.so
-- FFTW support: ON
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libflexiblas.so
-- Looking for cheev_
-- Looking for cheev_ - found
-- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl
-- LAPACK support: TRUE
-- SLEPc support: OFF
-- SUNDIALS support: ON
-- Found Gettext: /usr/bin/msgmerge (found version "0.22.5")
-- Found Intl: built in to C library
-- libuuid not found, using fallback UUID generator
-- UUID_SYSTEM_GENERATOR: FALSE
-- Enable coverage: OFF
-- Git revision: Unknown
-- Performing Test HAS_FLAG__Wnull_dereference
-- Performing Test HAS_FLAG__Wnull_dereference - Success
-- Warning flag is supported by compiler: -Wnull-dereference
-- Found negative flag: -Wno-cast-function-type
   replaced with -Wcast-function-type
-- Performing Test HAS_FLAG__Wno_cast_function_type
-- Performing Test HAS_FLAG__Wno_cast_function_type - Success
-- Warning flag is supported by compiler: -Wno-cast-function-type
-- Runtime checking level: CHECK=2
-- Message stack: BOUT_USE_MSGSTACK=ON
-- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF
-- Signal handling: BOUT_USE_SIGNAL=ON
-- Output coloring: BOUT_USE_COLOR=ON
-- Field name tracking: BOUT_USE_TRACK=ON
-- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF
-- Enable backtrace: BOUT_USE_BACKTRACE=ON
-- Performing Test HAS_PRETTY_FUNCTION
-- Performing Test HAS_PRETTY_FUNCTION - Success
-- Setting build type to 'RelWithDebInfo' as none was specified.
-- Not building test test-drift-instability, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-drift-instability-staggered, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-fieldgroupComm, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-gyro, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-interchange-instability, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-invertable-operator, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-invpar, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy-fv, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplacexy-short, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplacexz, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-multigrid-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-naulin-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2
-- Not building test test-petsc-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-petsc-laplace-MAST-grid, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC
-- Not building test test-snb, conflicts with: BOUT_USE_METRIC_3D
-- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE
-- Found Doxygen: /usr/bin/doxygen (found version "1.12.0") found components: doxygen dot
-- Found Sphinx: /usr/bin/sphinx-build

   --------------------------------
     BOUT++ Configuration Summary
   --------------------------------

   Bundled PVODE support    : ON
   PETSc support            : ON
   SLEPc support            : OFF
   SUNDIALS support         : ON
   HYPRE support            : OFF
   NetCDF support           : ON
   ADIOS2 support           : OFF
   FFTW support             : ON
   LAPACK support           : TRUE
   OpenMP support           : OFF
   Natural language support : ON
   ScoreP support           : OFF
   System UUID generator    : FALSE
   Extra debug output       : OFF
   Runtime error check level: 2
   Signal handling          : ON
   Output coloring          : ON
   Field name tracking      : ON
   Floating point exceptions: OFF
   Backtrace enabled        : ON
   RAJA enabled             : OFF
   Umpire enabled           : OFF
   Caliper enabled          : OFF
   CUDA enabled             : OFF
   Metric type              : 3D
   Python API support       : ON
   Sanitizers enabled       : None

   === Python ===

   Make sure that the tools/pylib directory is in your PYTHONPATH
   e.g. by adding to your ~/.bashrc file

       export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib:$PYTHONPATH

*** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi` to compile BOUT++ ***

-- Configuring done (2.9s)
-- Generating done (0.2s)
CMake Warning:
  Manually-specified variables were not used by the project:

    BOUT_TEST_TIMEOUT
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi
+ /usr/bin/cmake --build build_openmpi -j4 --verbose
Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o
[  2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o
[  2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o
[  2%] Generating locale/es/libbout.gmo, _mo_file_es
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/es/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/llnlmath.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/es/libbout.po
[  4%] Generating locale/de/libbout.gmo, _mo_file_de
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/de/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/de/libbout.po
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  429 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  485 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  543 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  565 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  583 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  698 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  714 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  730 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  745 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  761 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  777 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  793 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  809 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  824 |     #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  831 |     #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  837 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  850 |   #pragma omp parallel for
[  4%] Generating locale/fr/libbout.gmo, _mo_file_fr
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/fr/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/fr/libbout.po
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable]
  189 |   N_Vector v, v1, v2;
      |            ^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable]
  533 |   integer N, N_global;
      |              ^~~~~~~~
[  4%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_CN/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_CN/libbout.po
[  7%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_TW/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_TW/libbout.po
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  7%] Built target mofiles
[  7%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvspgmr.cpp
[  9%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable]
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |        ^~~~~~~~~
[  9%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/iterativ.cpp
[  9%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvdiag.cpp
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized]
  328 |     for (i=1; i <= krydim; i++) yg[i]=ZERO;
      |               ~~^~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here
  161 |   int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries;
      |                                    ^~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized]
  386 |   if (rho < beta) {
      |   ^~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |                                                              ^~~
In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1826:45,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 1876 |     if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp)))
      |                                                 ^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here
 1843 |   real del, delp, dcon;
      |             ^~~~
In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1944:28,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1827:41,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 2021 |     if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) {
      |                                                  ^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here
 1971 |   real del, delp, dcon;
      |             ^~~~
[ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   82 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[ 11%] Linking CXX shared library ../../lib/libpvode.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o  -Wl,-rpath,:::::::::::::::::::::::::::
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 11%] Built target pvode
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/pvbbdpre.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/band.cpp
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: ../../lib/libpvode.so.1.0.0
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
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gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 16%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/bout++.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field.cxx
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field2d.cxx
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field3d.cxx
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field_data.cxx
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field_factory.cxx
[ 21%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/fieldgenerators.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -MF CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/generated_fieldops.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -MF CMakeFiles/bout++.dir/src/field/globalfield.cxx.o.d -o CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/globalfield.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o -MF CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o.d -o CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/initialprofiles.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vecops.cxx.o -MF CMakeFiles/bout++.dir/src/field/vecops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vecops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/vecops.cxx
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[ 42%] Building CXX object CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx
[ 45%] Building CXX object CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/pardiv/invert_pardiv.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_factory.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_region.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o
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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
   80 |     if (mesh->firstY()) {
      |         ~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_factory.hxx:32,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:9,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:437:66: note: declared here
  437 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
   83 |     if (mesh->lastY()) {
      |         ~~~~~~~~~~~^~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:441:65: note: declared here
  441 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  473 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  474 |                                t);
      |                                ~~
In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_data.hxx:50,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field.hxx:39,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field2d.hxx:35,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_op.hxx:9,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:6:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  517 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
  518 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  978 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  979 |                                t);
      |                                ~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 1444 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1445 |                                t);
      |                                ~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field2D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1731:41: warning: unused parameter ‘f’ [-Wunused-parameter]
 1731 |   void BoundaryNeumann::apply(Field2D & f, BoutReal t) {
      |                               ~~~~~~~~~~^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1731:53: warning: unused parameter ‘t’ [-Wunused-parameter]
 1731 |   void BoundaryNeumann::apply(Field2D & f, BoutReal t) {
      |                                            ~~~~~~~~~^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 2152 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
 2153 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates_accessor.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/data/gridfromfile.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/data/gridfromoptions.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/difops.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -MF CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/gyro_average.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -MF CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/physicsmodel.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -MF CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/smoothing.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/smoothing.cxx: In function ‘BoutReal Vol_Integral(const Field2D&)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/smoothing.cxx:353:38: warning: unused parameter ‘var’ [-Wunused-parameter]
  353 | BoutReal Vol_Integral(const Field2D& var) {
      |                       ~~~~~~~~~~~~~~~^~~
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/sourcex.cxx
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[ 78%] Building CXX object CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o
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[ 78%] Building CXX object CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/bout_types.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/boutcomm.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/boutexception.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/derivs.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx
[ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/generator_context.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
   43 |   return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t());
      |          ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:25:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o
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[ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/msg_stack.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_ini.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_adios.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/optionsreader.cxx
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx:7:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx:5:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/output.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o
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[ 90%] Building CXX object CMakeFiles/bout++.dir/src/sys/range.cxx.o
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CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o CMakeFiles/bout++.dir/src/physics/snb.cxx.o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o" CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o" CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o" CMakeFiles/bout++.dir/src/solver/solver.cxx.o CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/libfmt.so.11.0.2 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf.so /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0
In member function ‘__ct ’,
    inlined from ‘_Construct’ at /usr/include/c++/14/bits/stl_construct.h:119:7,
    inlined from ‘construct’ at /usr/include/c++/14/bits/alloc_traits.h:706:19,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:607:39,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:969:16,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:1713:14,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr.h:463:59,
    inlined from ‘make_shared’ at /usr/include/c++/14/bits/shared_ptr.h:1008:39,
    inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:428:38,
    inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:226:14,
    inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx:68:21:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   75 |     data = new T[len];
      |            ^
/usr/include/c++/14/new: In member function ‘__ct_base ’:
/usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here
  133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
      |                          ^
/usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.2.0 lib/libbout++.so.5.2.0 lib/libbout++.so
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 92%] Built target bout++
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 92%] Generating resolve_enum.pxd
[ 95%] Generating boutpp.pyx
[ 95%] Generating boutcpp.pxd
[ 95%] Generating helper.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd
[ 95%] Generating helper.h
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.h
[ 95%] Generating libboutpp.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.13 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True
warning: resolve_enum.pxd:49:21: 'deflt' redeclared 
warning: resolve_enum.pxd:189:24: 'Standard' redeclared 
warning: resolve_enum.pxd:223:15: 'Standard' redeclared 
performance hint: libboutpp.pyx:2149:5: Exception check on 'callback' will always require the GIL to be acquired.
Possible solutions:
	1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
	2. Use an 'int' return type on 'callback' to allow an error code to be returned.
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 95%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.cxx
[ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o
[ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx
In file included from /usr/include/numpy/ndarraytypes.h:1929,
                 from /usr/include/numpy/ndarrayobject.h:12,
                 from /usr/include/numpy/arrayobject.h:5,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:1268:
/usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:41029:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
41029 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) {
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:9316:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
 9316 |   return __pyx_r;
      |          ^~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:8959:12: note: ‘__pyx_r’ was declared here
 8959 |   CELL_LOC __pyx_r;
      |            ^~~~~~~
In function ‘__pyx_pf_9libboutpp_54bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’,
    inlined from ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:65348:42:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:65442:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
65442 |   __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 3089, __pyx_L1_error)
      |                                                          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:10827:18: note: ‘__pyx_r’ was declared here
10827 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
[ 97%] Linking CXX shared library libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-313-x86_64-linux-gnu.so -o libboutpp.cpython-313-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 97%] Built target boutpp.cpython-313-x86_64-linux-gnu
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Building python interface
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target boutpp
gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0

+ PYPA=
+ LDPA=/usr/lib64/openmpi/lib
++ pwd
+ export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/
+ PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/
++ pwd
+ export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib/
+ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib/
+ /usr/bin/cmake --build build_openmpi/manual -j4 --verbose
Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual//CMakeFiles/progress.marks
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/gmake  -f CMakeFiles/Makefile2 manual/all
gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color="
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Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs
Running Sphinx v7.3.7
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making output directory... done
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/usr/lib/python3.13/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation.
/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced.
docstring of libboutpp.Laplacian:6: WARNING: Block quote ends without a blank line; unexpected unindent.
docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation.
docstring of libboutpp.Laplacian:6: ERROR: Unknown target name: "abla".
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'crosslines'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
/usr/lib/python3.13/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation.
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation.
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation.
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py".
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.13/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them
/usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them
/usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them
looking for now-outdated files... /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found.
none found
pickling environment... done
checking consistency... done
preparing documents... WARNING: unsupported theme option 'repository_url' given
WARNING: unsupported theme option 'repository_branch' given
done
WARNING: unsupported theme option 'path_to_docs' given
WARNING: unsupported theme option 'use_edit_page_button' given
WARNING: unsupported theme option 'use_repository_button' given
WARNING: unsupported theme option 'use_issues_button' given
WARNING: unsupported theme option 'home_page_in_toc' given
copying assets... copying static files... done
copying extra files... done
done
writing output... [  2%] _apidoc/boutdata
writing output... [  4%] _apidoc/boutpp
writing output... [  6%] _apidoc/boututils
writing output... [  8%] _apidoc/zoidberg
writing output... [ 10%] api_reference
writing output... [ 12%] developer_docs/code_layout
writing output... [ 15%] developer_docs/contributing
writing output... [ 17%] developer_docs/data_types
writing output... [ 19%] developer_docs/debugging
writing output... [ 21%] developer_docs/file_io
writing output... [ 23%] developer_docs/git_basics
writing output... [ 25%] developer_docs/mesh
writing output... [ 27%] developer_docs/natural_language
writing output... [ 29%] developer_docs/performance_profiling
writing output... [ 31%] developer_docs/petsc_interface
writing output... [ 33%] index
writing output... [ 35%] user_docs/BOUT_Gradperp_op
writing output... [ 38%] user_docs/adios2
writing output... [ 40%] user_docs/advanced_install
writing output... [ 42%] user_docs/algebraic_operators
writing output... [ 44%] user_docs/boundary_options
writing output... [ 46%] user_docs/bout_functions_for_physics
writing output... [ 48%] user_docs/bout_options
writing output... [ 50%] user_docs/coordinates
writing output... [ 52%] user_docs/differential_operators
writing output... [ 54%] user_docs/eigenvalue_solver
writing output... [ 56%] user_docs/gpu_support
writing output... [ 58%] user_docs/input_grids
writing output... [ 60%] user_docs/installing
writing output... [ 62%] user_docs/introduction
writing output... [ 65%] user_docs/invertable_operator
writing output... [ 67%] user_docs/laplacian
writing output... [ 69%] user_docs/makefiles
writing output... [ 71%] user_docs/new_in_v5
writing output... [ 73%] user_docs/nonlocal
writing output... [ 75%] user_docs/output_and_post
writing output... [ 77%] user_docs/parallel-transforms
writing output... [ 79%] user_docs/petsc
writing output... [ 81%] user_docs/physics_models
writing output... [ 83%] user_docs/preconditioning
writing output... [ 85%] user_docs/python
writing output... [ 88%] user_docs/python_boutpp
writing output... [ 90%] user_docs/quickstart
writing output... [ 92%] user_docs/running_bout
writing output... [ 94%] user_docs/staggered_grids
writing output... [ 96%] user_docs/testing
writing output... [ 98%] user_docs/time_integration
writing output... [100%] user_docs/variable_init

/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator.normal
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator.normal
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^

/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^

/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx'
generating indices... /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    &
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    |
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
    false
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
    true
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    >
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      >
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      >
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    <
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      <
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      <
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
    true
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
    false
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
    true
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
    false
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    &
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    |
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/time_integration.rst:1087: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
genindex py-modindex done
writing additional pages... search done
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 131 warnings.

The HTML pages are in docs.
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/index.html
Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/index.html
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
Built target sphinx-html
/usr/bin/gmake  -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/gmake  -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'.
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
Built target docs
gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0

+ export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+ export PYTHONPATH=
+ PYTHONPATH=
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
unset MPI_MAN;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset _LMFILES_;
unset LOADEDMODULES;
unset CMAKE_PREFIX_PATH;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset CMAKE_PREFIX_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in openmpi mpich
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/sbin -DCMAKE_INSTALL_SBINDIR:PATH=sbin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.13/site-packages/mpich -DBOUT_TEST_TIMEOUT=900 -DBOUT_ENABLE_METRIC_3D=ON -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON
-- Configuring BOUT++ version 5.2.1
-- The CXX compiler identification is GNU 14.3.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python3: /usr/bin/python3.13 (found version "3.13.9") found components: Interpreter
-- Could NOT find ClangFormat (missing: ClangFormat_BIN) 
CMake Warning (dev) at CMakeLists.txt:397 (message):
  'src/field/generated_fieldops.cxx' will not be regenerated when you make
  changes to either 'src/field/gen_fieldops.py' or
  'src/field/gen_fieldops.jinja'.  This is because either Python3 or
  clang-format is missing (see above messages for more information) or
  BOUT_GENERATE_FIELDOPS is OFF (current value: OFF).  This warning is only
  important for BOUT++ developers and can otherwise be safely ignored.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python3: /usr/bin/python3.13 (found suitable version "3.13.9", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed
-- Found Numpy: /usr/include (found version "1.26.4")
-- Found Cython: TRUE (found version "3.0.11")
-- Found Bash: /usr/bin/bash (found version "5.2.32")
-- Building BOUT++ Python interface
-- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.1")
-- Found MPI: TRUE (found version "4.1")
-- Enable OpenMP: OFF
-- HYPRE support: OFF
-- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0")
-- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0'
-- Found PETSc: /usr/include/mpich-x86_64/petsc
-- PETSc support: ON
-- Using external mpark.variant
-- Using external fmt
-- PVODE support: ON
-- The C compiler identification is GNU 14.3.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.2")
-- Found netCDFCxx version 4.3.1
-- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1")
-- NetCDF support: ON
-- ADIOS2 support: OFF
-- Found FFTW: /usr/lib64/libfftw3.so
-- FFTW support: ON
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libflexiblas.so
-- Looking for cheev_
-- Looking for cheev_ - found
-- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl
-- LAPACK support: TRUE
-- SLEPc support: OFF
-- SUNDIALS support: ON
-- Found Gettext: /usr/bin/msgmerge (found version "0.22.5")
-- Found Intl: built in to C library
-- libuuid not found, using fallback UUID generator
-- UUID_SYSTEM_GENERATOR: FALSE
-- Enable coverage: OFF
-- Git revision: Unknown
-- Performing Test HAS_FLAG__Wnull_dereference
-- Performing Test HAS_FLAG__Wnull_dereference - Success
-- Warning flag is supported by compiler: -Wnull-dereference
-- Found negative flag: -Wno-cast-function-type
   replaced with -Wcast-function-type
-- Performing Test HAS_FLAG__Wno_cast_function_type
-- Performing Test HAS_FLAG__Wno_cast_function_type - Success
-- Warning flag is supported by compiler: -Wno-cast-function-type
-- Runtime checking level: CHECK=2
-- Message stack: BOUT_USE_MSGSTACK=ON
-- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF
-- Signal handling: BOUT_USE_SIGNAL=ON
-- Output coloring: BOUT_USE_COLOR=ON
-- Field name tracking: BOUT_USE_TRACK=ON
-- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF
-- Enable backtrace: BOUT_USE_BACKTRACE=ON
-- Performing Test HAS_PRETTY_FUNCTION
-- Performing Test HAS_PRETTY_FUNCTION - Success
-- Setting build type to 'RelWithDebInfo' as none was specified.
-- Not building test test-drift-instability, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-drift-instability-staggered, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-fieldgroupComm, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-gyro, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-interchange-instability, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-invertable-operator, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-invpar, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy-fv, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplacexy-short, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-laplacexz, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-multigrid-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-naulin-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2
-- Not building test test-petsc-laplace, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-petsc-laplace-MAST-grid, conflicts with: BOUT_USE_METRIC_3D
-- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC
-- Not building test test-snb, conflicts with: BOUT_USE_METRIC_3D
-- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE
-- Found Doxygen: /usr/bin/doxygen (found version "1.12.0") found components: doxygen dot
-- Found Sphinx: /usr/bin/sphinx-build

   --------------------------------
     BOUT++ Configuration Summary
   --------------------------------

   Bundled PVODE support    : ON
   PETSc support            : ON
   SLEPc support            : OFF
   SUNDIALS support         : ON
   HYPRE support            : OFF
   NetCDF support           : ON
   ADIOS2 support           : OFF
   FFTW support             : ON
   LAPACK support           : TRUE
   OpenMP support           : OFF
   Natural language support : ON
   ScoreP support           : OFF
   System UUID generator    : FALSE
   Extra debug output       : OFF
   Runtime error check level: 2
   Signal handling          : ON
   Output coloring          : ON
   Field name tracking      : ON
   Floating point exceptions: OFF
   Backtrace enabled        : ON
   RAJA enabled             : OFF
   Umpire enabled           : OFF
   Caliper enabled          : OFF
   CUDA enabled             : OFF
   Metric type              : 3D
   Python API support       : ON
   Sanitizers enabled       : None

   === Python ===

   Make sure that the tools/pylib directory is in your PYTHONPATH
   e.g. by adding to your ~/.bashrc file

       export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib:$PYTHONPATH

*** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich` to compile BOUT++ ***

-- Configuring done (4.0s)
-- Generating done (0.2s)
CMake Warning:
  Manually-specified variables were not used by the project:

    BOUT_TEST_TIMEOUT
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich
+ /usr/bin/cmake --build build_mpich -j4 --verbose
Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o
[  2%] Generating locale/es/libbout.gmo, _mo_file_es
[  4%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o
[  4%] Generating locale/de/libbout.gmo, _mo_file_de
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/es/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/de/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/es/libbout.po
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/de/libbout.po
[  4%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o
[  4%] Generating locale/fr/libbout.gmo, _mo_file_fr
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/fr/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/llnlmath.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/fr/libbout.po
[  4%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_CN/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_CN/libbout.po
[  7%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_TW/
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_TW/libbout.po
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  429 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  485 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  543 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  565 |   #pragma omp parallel for reduction(+: sum)
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  583 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  698 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  714 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  730 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  745 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  761 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  777 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  793 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  809 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  824 |     #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  831 |     #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  837 |   #pragma omp parallel for
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  850 |   #pragma omp parallel for
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  7%] Built target mofiles
[  7%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvspgmr.cpp
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable]
  189 |   N_Vector v, v1, v2;
      |            ^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable]
  533 |   integer N, N_global;
      |              ^~~~~~~~
[  9%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp
[  9%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/iterativ.cpp
[  9%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvdiag.cpp
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable]
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |        ^~~~~~~~~
In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1826:45,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 1876 |     if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp)))
      |                                                 ^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here
 1843 |   real del, delp, dcon;
      |             ^~~~
In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1944:28,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1827:41,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 2021 |     if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) {
      |                                                  ^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here
 1971 |   real del, delp, dcon;
      |             ^~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized]
  328 |     for (i=1; i <= krydim; i++) yg[i]=ZERO;
      |               ~~^~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here
  161 |   int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries;
      |                                    ^~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized]
  386 |   if (rho < beta) {
      |   ^~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |                                                              ^~~
[ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   82 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[ 11%] Linking CXX shared library ../../lib/libpvode.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o  -Wl,-rpath,:::::::::::::::::::::::::
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 11%] Built target pvode
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o
[ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/pvbbdpre.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/band.cpp
[ 14%] Linking CXX shared library ../../lib/libpvpre.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: ../../lib/libpvode.so.1.0.0
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 14%] Built target pvpre
/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
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/usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/cmake/GenerateDateTimeFile.cmake
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[ 16%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field3d.cxx
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field_data.cxx
[ 19%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field_factory.cxx
[ 21%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/fieldgenerators.cxx
[ 21%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/fieldgroup.cxx
[ 21%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/fieldperp.cxx
[ 21%] Building CXX object CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -MF CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/generated_fieldops.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/globalfield.cxx.o
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[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o
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[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/vecops.cxx.o
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[ 26%] Building CXX object CMakeFiles/bout++.dir/src/field/vector2d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vector2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/vector2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vector2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/vector2d.cxx
[ 26%] Building CXX object CMakeFiles/bout++.dir/src/field/vector3d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vector3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/vector3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vector3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/vector3d.cxx
[ 26%] Building CXX object CMakeFiles/bout++.dir/src/field/where.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/where.cxx.o -MF CMakeFiles/bout++.dir/src/field/where.cxx.o.d -o CMakeFiles/bout++.dir/src/field/where.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/where.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o -MF CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/fft_fftw.cxx
[ 28%] Building CXX object CMakeFiles/bout++.dir/src/invert/lapack_routines.cxx.o
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx
[ 45%] Building CXX object CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/pardiv/invert_pardiv.cxx
[ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_factory.cxx
[ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_region.cxx
[ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
   80 |     if (mesh->firstY()) {
      |         ~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_factory.hxx:32,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:9,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:437:66: note: declared here
  437 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
   83 |     if (mesh->lastY()) {
      |         ~~~~~~~~~~~^~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:441:65: note: declared here
  441 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  473 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  474 |                                t);
      |                                ~~
In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_data.hxx:50,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field.hxx:39,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field2d.hxx:35,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_op.hxx:9,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:6:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  517 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
  518 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  978 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  979 |                                t);
      |                                ~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 1444 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1445 |                                t);
      |                                ~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field2D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1731:41: warning: unused parameter ‘f’ [-Wunused-parameter]
 1731 |   void BoundaryNeumann::apply(Field2D & f, BoutReal t) {
      |                               ~~~~~~~~~~^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1731:53: warning: unused parameter ‘t’ [-Wunused-parameter]
 1731 |   void BoundaryNeumann::apply(Field2D & f, BoutReal t) {
      |                                            ~~~~~~~~~^
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 2152 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
 2153 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates_accessor.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/data/gridfromfile.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/data/gridfromoptions.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/difops.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/fv_ops.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/impls/bout/boutmesh.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/index_derivs.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/interpolation_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/interpolation/bilinear_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/interpolation/hermite_spline_xz.cxx
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[ 54%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/interpolation/interpolation_z.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/interpolation/lagrange_4pt_xz.cxx
[ 54%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/parallel/fci.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/parallel/identity.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/parallel/shiftedmetric.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/parallel/shiftedmetricinterp.cxx
[ 59%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/parallel_boundary_region.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/surfaceiter.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -MF CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/gyro_average.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -MF CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/physicsmodel.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -MF CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/smoothing.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/snb.cxx.o -MF CMakeFiles/bout++.dir/src/physics/snb.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/snb.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/smoothing.cxx: In function ‘BoutReal Vol_Integral(const Field2D&)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/smoothing.cxx:353:38: warning: unused parameter ‘var’ [-Wunused-parameter]
  353 | BoutReal Vol_Integral(const Field2D& var) {
      |                       ~~~~~~~~~~~~~~~^~~
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/physics/sourcex.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/solver/impls/adams_bashforth/adams_bashforth.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/solver/impls/arkode/arkode.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/solver/impls/cvode/cvode.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o -MF CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/adios_object.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/bout_types.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/boutcomm.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/boutexception.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/derivs.cxx
[ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx
[ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/generator_context.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
   43 |   return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t());
      |          ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:25:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here
   69 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/hyprelib.cxx
[ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/msg_stack.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_ini.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_adios.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/optionsreader.cxx
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx:7:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx:5:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/output.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/petsclib.cxx
[ 90%] Building CXX object CMakeFiles/bout++.dir/src/sys/range.cxx.o
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[ 90%] Building CXX object CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o
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CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o CMakeFiles/bout++.dir/src/physics/snb.cxx.o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o" CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o" CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o" CMakeFiles/bout++.dir/src/solver/solver.cxx.o CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/libfmt.so.11.0.2 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf.so /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0
In member function ‘__ct ’,
    inlined from ‘_Construct’ at /usr/include/c++/14/bits/stl_construct.h:119:7,
    inlined from ‘construct’ at /usr/include/c++/14/bits/alloc_traits.h:706:19,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:607:39,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:969:16,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:1713:14,
    inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr.h:463:59,
    inlined from ‘make_shared’ at /usr/include/c++/14/bits/shared_ptr.h:1008:39,
    inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:428:38,
    inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:226:14,
    inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx:68:21:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   75 |     data = new T[len];
      |            ^
/usr/include/c++/14/new: In member function ‘__ct_base ’:
/usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here
  133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
      |                          ^
/usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.2.0 lib/libbout++.so.5.2.0 lib/libbout++.so
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 92%] Built target bout++
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 92%] Generating resolve_enum.pxd
[ 92%] Generating boutpp.pyx
[ 95%] Generating boutcpp.pxd
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build
[ 95%] Generating helper.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd
[ 95%] Generating helper.h
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.h
[ 95%] Generating libboutpp.cpp
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.13 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True
warning: resolve_enum.pxd:49:21: 'deflt' redeclared 
warning: resolve_enum.pxd:189:24: 'Standard' redeclared 
warning: resolve_enum.pxd:223:15: 'Standard' redeclared 
performance hint: libboutpp.pyx:2149:5: Exception check on 'callback' will always require the GIL to be acquired.
Possible solutions:
	1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
	2. Use an 'int' return type on 'callback' to allow an error code to be returned.
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp
[ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o
[ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx
In file included from /usr/include/numpy/ndarraytypes.h:1929,
                 from /usr/include/numpy/ndarrayobject.h:12,
                 from /usr/include/numpy/arrayobject.h:5,
                 from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:1268:
/usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:41029:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
41029 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) {
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:9316:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
 9316 |   return __pyx_r;
      |          ^~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:8959:12: note: ‘__pyx_r’ was declared here
 8959 |   CELL_LOC __pyx_r;
      |            ^~~~~~~
In function ‘__pyx_pf_9libboutpp_54bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’,
    inlined from ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:65348:42:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:65442:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
65442 |   __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 3089, __pyx_L1_error)
      |                                                          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:10827:18: note: ‘__pyx_r’ was declared here
10827 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
[ 97%] Linking CXX shared library libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-313-x86_64-linux-gnu.so -o libboutpp.cpython-313-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 97%] Built target boutpp.cpython-313-x86_64-linux-gnu
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Building python interface
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target boutpp
gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0

+ PYPA=
+ LDPA=/usr/lib64/mpich/lib
++ pwd
+ export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/
+ PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/
++ pwd
+ export LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib/
+ LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib/
+ /usr/bin/cmake --build build_mpich/manual -j4 --verbose
Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual//CMakeFiles/progress.marks
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/gmake  -f CMakeFiles/Makefile2 manual/all
gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs
Running Sphinx v7.3.7
breathe module not installed
recommonmark module not installed
making output directory... done
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 48 source files that are out of date
updating environment: [new config] 48 added, 0 changed, 0 removed
reading sources... [  2%] _apidoc/boutdata
reading sources... [  4%] _apidoc/boutpp
reading sources... [  6%] _apidoc/boututils
No mlab available
reading sources... [  8%] _apidoc/zoidberg
reading sources... [ 10%] api_reference
reading sources... [ 12%] developer_docs/code_layout
reading sources... [ 15%] developer_docs/contributing
reading sources... [ 17%] developer_docs/data_types
reading sources... [ 19%] developer_docs/debugging
reading sources... [ 21%] developer_docs/file_io
reading sources... [ 23%] developer_docs/git_basics
reading sources... [ 25%] developer_docs/mesh
reading sources... [ 27%] developer_docs/natural_language
reading sources... [ 29%] developer_docs/performance_profiling
reading sources... [ 31%] developer_docs/petsc_interface
reading sources... [ 33%] index
reading sources... [ 35%] user_docs/BOUT_Gradperp_op
reading sources... [ 38%] user_docs/adios2
reading sources... [ 40%] user_docs/advanced_install
reading sources... [ 42%] user_docs/algebraic_operators
reading sources... [ 44%] user_docs/boundary_options
reading sources... [ 46%] user_docs/bout_functions_for_physics
reading sources... [ 48%] user_docs/bout_options
reading sources... [ 50%] user_docs/coordinates
reading sources... [ 52%] user_docs/differential_operators
reading sources... [ 54%] user_docs/eigenvalue_solver
reading sources... [ 56%] user_docs/gpu_support
reading sources... [ 58%] user_docs/input_grids
reading sources... [ 60%] user_docs/installing
reading sources... [ 62%] user_docs/introduction
reading sources... [ 65%] user_docs/invertable_operator
reading sources... [ 67%] user_docs/laplacian
reading sources... [ 69%] user_docs/makefiles
reading sources... [ 71%] user_docs/new_in_v5
reading sources... [ 73%] user_docs/nonlocal
reading sources... [ 75%] user_docs/output_and_post
reading sources... [ 77%] user_docs/parallel-transforms
reading sources... [ 79%] user_docs/petsc
reading sources... [ 81%] user_docs/physics_models
reading sources... [ 83%] user_docs/preconditioning
reading sources... [ 85%] user_docs/python
reading sources... [ 88%] user_docs/python_boutpp
reading sources... [ 90%] user_docs/quickstart
reading sources... [ 92%] user_docs/running_bout
reading sources... [ 94%] user_docs/staggered_grids
reading sources... [ 96%] user_docs/testing
reading sources... [ 98%] user_docs/time_integration
reading sources... [100%] user_docs/variable_init

/usr/lib/python3.13/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation.
/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced.
docstring of libboutpp.Laplacian:6: WARNING: Block quote ends without a blank line; unexpected unindent.
docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation.
docstring of libboutpp.Laplacian:6: ERROR: Unknown target name: "abla".
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'crosslines'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
/usr/lib/python3.13/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation.
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation.
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation.
/usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py".
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.13/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them
/usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them
/usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them
/usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found.
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... WARNING: unsupported theme option 'repository_url' given
WARNING: unsupported theme option 'repository_branch' given
WARNING: unsupported theme option 'path_to_docs' given
WARNING: unsupported theme option 'use_edit_page_button' given
WARNING: unsupported theme option 'use_repository_button' given
WARNING: unsupported theme option 'use_issues_button' given
WARNING: unsupported theme option 'home_page_in_toc' given
done
copying assets... copying static files... done
copying extra files... done
done
writing output... [  2%] _apidoc/boutdata
writing output... [  4%] _apidoc/boutpp
writing output... [  6%] _apidoc/boututils
writing output... [  8%] _apidoc/zoidberg
writing output... [ 10%] api_reference
writing output... [ 12%] developer_docs/code_layout
writing output... [ 15%] developer_docs/contributing
writing output... [ 17%] developer_docs/data_types
writing output... [ 19%] developer_docs/debugging
writing output... [ 21%] developer_docs/file_io
writing output... [ 23%] developer_docs/git_basics
writing output... [ 25%] developer_docs/mesh
writing output... [ 27%] developer_docs/natural_language
writing output... [ 29%] developer_docs/performance_profiling
writing output... [ 31%] developer_docs/petsc_interface
writing output... [ 33%] index
writing output... [ 35%] user_docs/BOUT_Gradperp_op
writing output... [ 38%] user_docs/adios2
writing output... [ 40%] user_docs/advanced_install
writing output... [ 42%] user_docs/algebraic_operators
writing output... [ 44%] user_docs/boundary_options
writing output... [ 46%] user_docs/bout_functions_for_physics
writing output... [ 48%] user_docs/bout_options
writing output... [ 50%] user_docs/coordinates
writing output... [ 52%] user_docs/differential_operators
writing output... [ 54%] user_docs/eigenvalue_solver
writing output... [ 56%] user_docs/gpu_support
writing output... [ 58%] user_docs/input_grids
writing output... [ 60%] user_docs/installing
writing output... [ 62%] user_docs/introduction
writing output... [ 65%] user_docs/invertable_operator
writing output... [ 67%] user_docs/laplacian
writing output... [ 69%] user_docs/makefiles
writing output... [ 71%] user_docs/new_in_v5
writing output... [ 73%] user_docs/nonlocal
writing output... [ 75%] user_docs/output_and_post
writing output... [ 77%] user_docs/parallel-transforms
writing output... [ 79%] user_docs/petsc
writing output... [ 81%] user_docs/physics_models
writing output... [ 83%] user_docs/preconditioning
writing output... [ 85%] user_docs/python
writing output... [ 88%] user_docs/python_boutpp
writing output... [ 90%] user_docs/quickstart
writing output... [ 92%] user_docs/running_bout
writing output... [ 94%] user_docs/staggered_grids
writing output... [ 96%] user_docs/testing
writing output... [ 98%] user_docs/time_integration
writing output... [100%] user_docs/variable_init

/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator.normal
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator.normal
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^

/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^

/usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx'
generating indices... /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    &
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    |
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
    false
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
    true
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    >
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      >
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      >
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    <
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      <
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      <
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
    true
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
    false
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
    true
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4]
      true
      ----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
    false
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5]
      false
      -----^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    &
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      &
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    |
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      |
      ^

/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode.
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake'
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/time_integration.rst:1087: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
genindex py-modindex done
writing additional pages... search done
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 131 warnings.

The HTML pages are in docs.
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/index.html
Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/index.html
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
Built target sphinx-html
/usr/bin/gmake  -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/gmake  -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'.
gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
Built target docs
gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0

+ export LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+ export PYTHONPATH=
+ PYTHONPATH=
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.xnTPk9
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ '[' /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
++ dirname /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/bout++-5.2.0-build
+ mkdir /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.2.0
+ for mpi in openmpi mpich
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
CMAKE_PREFIX_PATH=/usr/lib64/openmpi; export CMAKE_PREFIX_PATH;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi
++ export CMAKE_PREFIX_PATH
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
+ /usr/bin/cmake --install build_openmpi
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so" to "/usr//usr/lib64/openmpi/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/__init__.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/openmpi/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/openmpi/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/vector.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/spgmr.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/smalldense.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/pvbbdpre.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/nvector.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/llnltyps.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/llnlmath.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/iterativ.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvspgmr.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvode.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvdiag.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/band.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODEConfig.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODEConfig-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.2.0
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.2.0" to "/usr//usr/lib64/openmpi/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/where.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/vector3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/vector2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/vecops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/utils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/unused.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/stencils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/sourcex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/smoothing.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/output.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/optionsreader.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/options.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/multiostream.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/msg_stack.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/mask.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/lapack_routines.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/invert_parderiv.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/invert_laplace.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/interpolation_z.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/interpolation_xz.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/interpolation.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/initialprofiles.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/gyro_average.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/globals.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/fieldperp.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field_data.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/fft.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/difops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/derivs.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/dcomplex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boutexception.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boutcomm.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout_types.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/where.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vectormetric.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vector3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vector2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vecops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/utils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/unused.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/traits.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/template_combinations.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/variant.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/uncopyable.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/type_name.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/timer.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/range.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/gettext.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/generator_context.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/expressionparser.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/surfaceiter.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sundials_backports.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/stencils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sourcex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/solverfactory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/solver.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/snb.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/smoothing.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/slepclib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/single_index_ops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/scorepwrapper.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/rvec.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/rkscheme.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/rajalib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/physicsmodel.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/petsclib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/petsc_interface.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/paralleltransform.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/output_bout_types.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/output.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/optionsreader.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/options_io.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/options.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/operatorstencil.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/openmpwrap.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/multiostream.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/msg_stack.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/mpi_wrapper.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/monitor.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/mesh.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/mask.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/macro_for_each.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/lapack_routines.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invertable_operator.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert_pardiv.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert_parderiv.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert_laplace.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexz.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexy2_hypre.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexy2.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexy.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/interpolation_z.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/interpolation_xz.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/interpolation.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/initialprofiles.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/index_derivs_interface.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/index_derivs.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/hyprelib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/hypre_interface.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/gyro_average.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/griddata.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/globals.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/globalindexer.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/globalfield.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/generic_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/fv_ops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/fieldperp.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/fieldgroup.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/field_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/field_data.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/field_accessor.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/field3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/field2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/field.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/fft.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/expr.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/difops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/derivs.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/deriv_store.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/dcomplex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/coordinates_accessor.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/coordinates.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/constants.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/caliper_wrapper.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/build_config.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/boutexception.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/boutcomm.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/bout_types.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/bout_enum_class.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/bout.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/boundary_standard.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/boundary_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/assert.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/array.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/adios_object.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boundary_standard.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boundary_factory.hxx
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/build_defines.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/revision.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/version.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/update_version_number_in_files.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/update_citations.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout_4to5
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout_3to4.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-header-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-format-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-stop-script
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-sonnet
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-log-color
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-changelog-generator.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-build-deps.sh
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-boutdata-restart-create
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-archive-helper.sh
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-add-mod-path
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/bin/bout-config
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutconfig/__init__.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/bout++Targets.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/bout++Targets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/bout++ConfigVersion.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/BOUT++functions.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/CorrectWindowsPaths.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindClangFormat.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindFFTW.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindHYPRE.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindnetCDF.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindnetCDFCxx.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindPackageMultipass.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindLibuuid.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindPETSc.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindScoreP.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindSLEPc.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindSUNDIALS.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/FindSphinx.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/ResolveCompilerPaths.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/bout++/bout++Config.cmake
++ find /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi
++ grep -E '/libbout|/libpvode|/libpvpre'
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0: RUNPATH=/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/openmpi/lib
+ rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/bout++
+ mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/modulefiles/bout++
+ cat
+ DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
+ /usr/bin/cmake --install build_openmpi/manual
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++/
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//objects.inv
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//searchindex.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/init_balloon.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/stagLocations.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/quickstart_conduction_example.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/sod_result.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/interchange_inst_test.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-step.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-sinusoidal.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/par_laplace.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMatrix.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMesh.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/poincare.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/elliptic_grid.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/grid_gen.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/boutmesh-comms.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/topology_schematic.svg
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/topology_cross_section.svg
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/diffStencils.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/fluid_norm_mc.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_vector_set.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/operator_stencil_uml.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_interface_overview.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/memory.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/layout2.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/layout1.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//search.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//py-modindex.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//genindex.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/variable_init.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/time_integration.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/testing.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/staggered_grids.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/running_bout.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/quickstart.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/python_boutpp.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/python.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/preconditioning.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/physics_models.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/petsc.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/parallel-transforms.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/output_and_post.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/nonlocal.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/new_in_v5.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/makefiles.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/laplacian.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/invertable_operator.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/introduction.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/installing.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/input_grids.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/gpu_support.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/eigenvalue_solver.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/differential_operators.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/coordinates.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/bout_options.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/boundary_options.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/algebraic_operators.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/advanced_install.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/adios2.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/BOUT_Gradperp_op.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//index.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/petsc_interface.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/performance_profiling.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/natural_language.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/mesh.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/git_basics.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/file_io.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/debugging.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/data_types.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/contributing.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/code_layout.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//api_reference.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/variable_init.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/time_integration.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/testing.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/staggered_grids.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/running_bout.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/quickstart.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/python_boutpp.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/python.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/preconditioning.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/physics_models.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/petsc.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/parallel-transforms.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/output_and_post.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/nonlocal.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/new_in_v5.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/makefiles.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/laplacian.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/invertable_operator.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/introduction.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/installing.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/input_grids.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/gpu_support.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/eigenvalue_solver.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/differential_operators.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/coordinates.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/bout_options.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/bout_functions_for_physics.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/boundary_options.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/algebraic_operators.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/advanced_install.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/adios2.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/BOUT_Gradperp_op.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/index.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/petsc_interface.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/performance_profiling.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/natural_language.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/mesh.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/git_basics.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/file_io.rst.txt
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/debugging.rst.txt
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-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/basic.css
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/doctools.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/documentation_options.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/file.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/language_data.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/minus.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/plus.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/searchtools.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/sphinx_highlight.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/pygments.css
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
unset MPI_MAN;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset _LMFILES_;
unset LOADEDMODULES;
unset CMAKE_PREFIX_PATH;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset CMAKE_PREFIX_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in openmpi mpich
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
+ /usr/bin/cmake --install build_mpich
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so" to "/usr//usr/lib64/mpich/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/__init__.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/mpich/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/mpich/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/vector.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/spgmr.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/smalldense.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/pvbbdpre.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/nvector.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/llnltyps.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/llnlmath.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/iterativ.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvspgmr.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvode.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvdiag.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/band.h
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODEConfig.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODEConfig-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.2.0
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.2.0" to "/usr//usr/lib64/mpich/lib"
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/where.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vector3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vector2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vecops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/utils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/unused.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/stencils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/sourcex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/smoothing.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/output.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/optionsreader.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/options.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/multiostream.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/msg_stack.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/mask.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/lapack_routines.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/invert_parderiv.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/invert_laplace.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/interpolation_z.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/interpolation_xz.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/interpolation.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/initialprofiles.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/gyro_average.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/globals.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/fieldperp.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field_data.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/fft.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/difops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/derivs.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/dcomplex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boutexception.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boutcomm.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout_types.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/where.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vectormetric.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vector3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vector2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vecops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/utils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/unused.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/traits.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/template_combinations.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/variant.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/uncopyable.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/type_name.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/timer.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/range.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/gettext.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/generator_context.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/expressionparser.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/surfaceiter.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sundials_backports.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/stencils.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sourcex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/solverfactory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/solver.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/snb.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/smoothing.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/slepclib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/single_index_ops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/scorepwrapper.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/rvec.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/rkscheme.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/rajalib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/physicsmodel.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/petsclib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/petsc_interface.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/paralleltransform.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/output_bout_types.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/output.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/optionsreader.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/options_io.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/options.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/operatorstencil.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/openmpwrap.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/multiostream.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/msg_stack.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/mpi_wrapper.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/monitor.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/mesh.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/mask.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/macro_for_each.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/lapack_routines.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invertable_operator.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert_pardiv.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert_parderiv.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert_laplace.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert/laplacexz.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy2_hypre.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy2.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/interpolation_z.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/interpolation_xz.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/interpolation.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/initialprofiles.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/index_derivs_interface.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/index_derivs.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/hyprelib.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/hypre_interface.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/gyro_average.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/griddata.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/globals.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/globalindexer.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/globalfield.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/generic_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/fv_ops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/fieldperp.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/fieldgroup.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/field_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/field_data.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/field_accessor.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/field3d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/field2d.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/field.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/fft.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/expr.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/difops.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/derivs.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/deriv_store.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/dcomplex.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/coordinates_accessor.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/coordinates.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/constants.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/caliper_wrapper.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/build_config.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/boutexception.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/boutcomm.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/bout_types.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/bout_enum_class.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/bout.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/boundary_standard.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/boundary_factory.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/assert.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/array.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/adios_object.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boundary_standard.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boundary_region.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boundary_op.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boundary_factory.hxx
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/build_defines.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/revision.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/version.hxx
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/update_version_number_in_files.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/update_citations.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout_4to5
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout_3to4.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-macro-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-header-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-format-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-factory-upgrader.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-stop-script
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-sonnet
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-log-color
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-changelog-generator.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-build-deps.sh
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-boutdata-restart-create
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-archive-helper.sh
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-add-mod-path
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-config
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutconfig/__init__.py
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Targets.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Targets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++ConfigVersion.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/BOUT++functions.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/CorrectWindowsPaths.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindClangFormat.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindFFTW.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindHYPRE.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindnetCDF.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindnetCDFCxx.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindPackageMultipass.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindLibuuid.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindPETSc.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindScoreP.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindSLEPc.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindSUNDIALS.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindSphinx.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/ResolveCompilerPaths.cmake
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Config.cmake
++ find /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich
++ grep -E '/libbout|/libpvode|/libpvpre'
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0: RUNPATH=/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre')
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib
+ rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/bout++
+ mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/modulefiles/bout++
+ cat
+ DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
+ /usr/bin/cmake --install build_mpich/manual
-- Install configuration: "RelWithDebInfo"
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++/
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//objects.inv
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//searchindex.js
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/init_balloon.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/stagLocations.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/quickstart_conduction_example.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/sod_result.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/interchange_inst_test.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-step.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-sinusoidal.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/par_laplace.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMatrix.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMesh.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/poincare.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/elliptic_grid.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/grid_gen.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/boutmesh-comms.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/topology_schematic.svg
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/topology_cross_section.svg
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/diffStencils.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/fluid_norm_mc.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_vector_set.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/operator_stencil_uml.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_interface_overview.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/memory.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/layout2.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/layout1.png
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//search.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//py-modindex.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//genindex.html
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/variable_init.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/time_integration.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/testing.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/staggered_grids.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/running_bout.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/quickstart.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/python_boutpp.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/python.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/preconditioning.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/physics_models.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/petsc.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/parallel-transforms.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/output_and_post.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/nonlocal.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/new_in_v5.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/makefiles.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/laplacian.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/invertable_operator.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/introduction.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/installing.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/input_grids.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/gpu_support.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/eigenvalue_solver.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/differential_operators.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/coordinates.html
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-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/boundary_options.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/algebraic_operators.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/advanced_install.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/adios2.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/BOUT_Gradperp_op.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//index.html
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/petsc_interface.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/performance_profiling.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/natural_language.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/mesh.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/git_basics.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/file_io.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/debugging.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/data_types.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/contributing.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//developer_docs/code_layout.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//api_reference.html
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/variable_init.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/time_integration.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/testing.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/staggered_grids.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/running_bout.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/quickstart.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/python_boutpp.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/python.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/preconditioning.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/physics_models.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/petsc.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/parallel-transforms.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/output_and_post.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/nonlocal.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/new_in_v5.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/makefiles.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/laplacian.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/invertable_operator.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/introduction.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/installing.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/input_grids.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/gpu_support.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/eigenvalue_solver.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/differential_operators.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/coordinates.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/bout_options.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/bout_functions_for_physics.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/boundary_options.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/algebraic_operators.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/advanced_install.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/adios2.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/user_docs/BOUT_Gradperp_op.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/index.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/petsc_interface.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/performance_profiling.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/natural_language.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/mesh.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/git_basics.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/file_io.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/debugging.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/data_types.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/contributing.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/developer_docs/code_layout.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/api_reference.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/zoidberg.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/boututils.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/boutpp.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/boutdata.rst.txt
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_apidoc
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_apidoc/zoidberg.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_apidoc/boututils.html
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_apidoc/boutpp.html
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-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static
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-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/basic.css
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/doctools.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/documentation_options.js
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-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/plus.png
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/searchtools.js
-- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/sphinx_highlight.js
-- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_static/pygments.css
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ /usr/lib/rpm/find-lang.sh /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT libbout
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.2.0-1.fc41 --unique-debug-suffix -5.2.0-1.fc41.x86_64 --unique-debug-src-base bout++-5.2.0-1.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0
find-debuginfo: starting
Extracting debug info from 8 files
DWARF-compressing 8 files
sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.2.0-1.fc41.x86_64
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/update_citations.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/update_version_number_in_files.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/update_citations.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/update_version_number_in_files.py from /usr/bin/env python3 to #!/usr/bin/python3
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13
Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13 using python3.13
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutconfig/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutconfig/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents
Scanned 170 directories and 887 files,
               processed 55 inodes,
               4 modified (0 replaced + 4 rewritten),
               0 unsupported format, 0 errors
Reading /builddir/build/BUILD/bout++-5.2.0-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.srClre
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.2.0
+ for mpi in openmpi mpich
+ fail=1
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
CMAKE_PREFIX_PATH=/usr/lib64/openmpi; export CMAKE_PREFIX_PATH;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi
++ export CMAKE_PREFIX_PATH
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ pushd build_openmpi
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ export HDF5_USE_FILE_LOCKING=FALSE
+ HDF5_USE_FILE_LOCKING=FALSE
+ sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest
#!/bin/bash

# Cores: 3

make || exit

test -z $MPIRUN  && MPIRUN='mpirun -np'
# Kill the test after 3 seconds, if it hasn't already exited
OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization

e=$?

if test $e -ne 0
then
    echo "The test failed. That can be caused by a timeout."
    echo "If this test is run on high load, it may fail occasionally."
    echo "The load is:"
    uptime
fi

exit $e
+ make -j4 build-check
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 build-check
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 76
make  -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  0%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/src/gtest-all.cc
[  0%] Creating test-fci-boundary grid file
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib: /usr/bin/python3.13 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/grid.fci.nc
[  3%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  5%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y/wave.cxx
[ 48%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection/advection.cxx
[ 48%] Linking CXX executable wave
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
Making curvilinear poloidal grid
creating grid...
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Built target MMS-wave-1d-y
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion/diffusion.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Built target test-fci-boundary-grid
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci/fci_mms.cxx
[ 48%] Linking CXX executable advection
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Built target MMS-advection
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 48%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d/wave.cxx
[ 50%] Linking CXX executable cyto
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 50%] Linking CXX executable fci_mms
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../../lib/libpvpre.so.1.0.0 ../../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 50%] Built target MMS-spatial-fci
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 50%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 50%] Built target MMS-diffusion
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 52%] Built target boutpp.cpython-313-x86_64-linux-gnu
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace/boutexcept.cxx
[ 53%] Linking CXX executable wave
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 55%] Linking CXX executable boutexcept
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 55%] Built target test-backtrace
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 56%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler/test_beuler.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 56%] Built target MMS-wave-1d
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 56%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx
[ 56%] Linking CXX executable test_yupdown_weights
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 56%] Built target test-yupdown-weights
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 57%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args/command-args.cxx
[ 57%] Linking CXX shared library ../../../../../lib/libgtest.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.16.0 -o ../../../../../lib/libgtest.so.1.16.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o"
[ 57%] Linking CXX executable test_beuler
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 57%] Linking CXX executable command-args
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 57%] Built target test-command-args
[ 57%] Linking CXX executable test-bout-override-default-option
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 57%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications/test-communications.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 57%] Built target test_beuler
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 57%] Built target test-bout-override-default-option
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 59%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 59%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic/test_cyclic.cxx
[ 59%] Linking CXX executable test-communications
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 59%] Built target gtest
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 59%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2/test_delp2.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 59%] Built target test-communications
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 60%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade/test-datafile-facade.cxx
[ 60%] Linking CXX executable test-coordinates-initialization
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 60%] Built target test-coordinates-initialization
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 60%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata/test_griddata.cxx
[ 60%] Linking CXX executable test-datafile-facade
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 60%] Linking CXX executable test_cyclic
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 61%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 61%] Built target test-griddata
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 61%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 61%] Built target test-datafile-facade
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 61%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial/test_initial.cxx
[ 63%] Linking CXX executable test_delp2
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 63%] Built target test-cyclic
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 63%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate/test_interpolate.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 63%] Built target test-delp2
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 63%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z/test_interpolate.cxx
[ 63%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 64%] Linking CXX executable test_initial
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 64%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 64%] Built target test-initial
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 65%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf/test-options-netcdf.cxx
[ 65%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 67%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 67%] Linking CXX executable test-options-netcdf
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 67%] Built target test-interpolate
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 67%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io/test-restart-io.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 67%] Built target test-interpolate-z
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 68%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting/test_restarting.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 68%] Built target test-options-netcdf
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 68%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth/test_smooth.cxx
[ 68%] Linking CXX executable test-laplace3d
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 68%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 69%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver/test_solver.cxx
[ 69%] Linking CXX executable test_restarting
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 69%] Linking CXX executable test_smooth
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 69%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash/squash.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 69%] Built target test-smooth
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
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[ 69%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck/test_stopCheck.cxx
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make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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[ 69%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file/test_stopCheck.cxx
[ 71%] Linking CXX executable squash
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 71%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 71%] Linking CXX executable test_solver
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 72%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Built target test-squash
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift/test-twistshift.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Built target test-stopCheck
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered/test-twistshift.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Built target test-stopCheck-file
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec/testVec.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 72%] Built target test-solver
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 73%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown/test_yupdown.cxx
[ 73%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 75%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Built target test-twistshift
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Built target test-twistshift-staggered
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/src/gmock-all.cc
[ 75%] Linking CXX executable testVec
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 75%] Linking CXX executable test_yupdown
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Field3D>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   14 |   for (int i = 0; i < fields.size(); i++) {
      |                   ~~^~~~~~~~~~~~~~~
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Built target test-vec
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 76%] Building python interface
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 76%] Built target boutpp
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 76%] Built target test-yupdown
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 76%] Built target build-check-integrated-tests
[ 77%] Linking CXX executable get_par_bndry
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
[ 77%] Linking CXX shared library ../../../../../lib/libgmock.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.16.0 -o ../../../../../lib/libgmock.so.1.16.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o"  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../../../lib/libgtest.so.1.16.0
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 77%] Built target test-fci-boundary
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 77%] Built target build-check-mms-tests
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 77%] Built target gmock
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 77%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field3d.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field2d.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable]
   29 |   bout::HypreLib hyprelib{};
      |                  ^~~~~~~~
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field_factory.cxx
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldgroup.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldperp.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/parallel/test_shiftedmetric.cxx
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[ 90%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_coordinates.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_interpolation.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_timer.cxx
[ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_type_name.cxx
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[ 98%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o
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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_raja.cxx:96:7: warning: multi-line comment [-Wcomment]
   96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall  under \
      |       ^
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/serial_tests.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../lib/libgmock.so.1.16.0 ../../lib/libbout++.so.5.2.0 ../../lib/libgtest.so.1.16.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target serial_tests
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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[100%] Built target build-check-unit-tests
make  -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'.
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+ SEGFAULT_SIGNALS=segv
+ make check-unit-tests
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make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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[  0%] Built target gtest
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  5%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
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[100%] Built target serial_tests
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
ctest -R serial_tests --output-on-failure
Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi
    Start 1: serial_tests
1/1 Test #1: serial_tests .....................   Passed    5.19 sec

100% tests passed, 0 tests failed out of 1

Total Test time (real) =   5.23 sec
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target check-unit-tests
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
+ SEGFAULT_SIGNALS=segv
+ make check-mms-tests
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 check-mms-tests
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 40
make  -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  7%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 10%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 92%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 92%] Built target MMS-wave-1d-y
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 92%] Built target test-fci-boundary-grid
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 95%] Built target test-fci-boundary
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 95%] Built target MMS-advection
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 97%] Built target MMS-diffusion
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 97%] Built target MMS-spatial-fci
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target MMS-wave-1d
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target build-check-mms-tests
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
ctest -R MMS- --output-on-failure
Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi
    Start 37: MMS-diffusion
1/8 Test #37: MMS-diffusion ....................   Passed   15.87 sec
    Start 38: MMS-spatial-fci
2/8 Test #38: MMS-spatial-fci ..................   Passed    9.89 sec
    Start 39: MMS-wave-1d
3/8 Test #39: MMS-wave-1d ......................   Passed   14.23 sec
    Start 40: MMS-wave-1d-y
4/8 Test #40: MMS-wave-1d-y ....................   Passed   12.11 sec
    Start 41: MMS-bracket
5/8 Test #41: MMS-bracket ......................   Passed    1.50 sec
    Start 42: MMS-derivatives3
6/8 Test #42: MMS-derivatives3 .................   Passed    1.79 sec
    Start 43: MMS-shiftedmetricinterp
7/8 Test #43: MMS-shiftedmetricinterp ..........   Passed   13.14 sec
    Start 44: MMS-upwinding3
8/8 Test #44: MMS-upwinding3 ...................   Passed    2.08 sec

100% tests passed, 0 tests failed out of 8

Total Test time (real) =  70.61 sec
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
Built target check-mms-tests
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
+ SEGFAULT_SIGNALS=segv
+ make check-integrated-tests
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 check-integrated-tests
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 56
make  -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  5%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[  7%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 66%] Built target bout++
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 66%] Built target test-yupdown-weights
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 69%] Built target boutpp.cpython-313-x86_64-linux-gnu
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 71%] Building python interface
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 71%] Built target boutpp
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 73%] Built target test-backtrace
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Built target test_beuler
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 75%] Built target test-bout-override-default-option
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 76%] Built target test-command-args
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 76%] Built target test-communications
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 78%] Built target test-coordinates-initialization
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 78%] Built target test-cyclic
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 80%] Built target test-delp2
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 82%] Built target test-datafile-facade
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 83%] Built target test-griddata
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 83%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 85%] Built target test-initial
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 85%] Built target test-interpolate
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 87%] Built target test-interpolate-z
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 87%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 89%] Built target test-options-netcdf
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 89%] Built target test-restart-io
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 91%] Built target test-restarting
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 91%] Built target test-smooth
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 92%] Built target test-solver
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 94%] Built target test-squash
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 94%] Built target test-stopCheck
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 96%] Built target test-stopCheck-file
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 96%] Built target test-twistshift
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 98%] Built target test-twistshift-staggered
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[ 98%] Built target test-vec
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target test-yupdown
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
[100%] Built target build-check-integrated-tests
make  -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
make  -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
ctest -R test- --output-on-failure
Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi
      Start  2: test-backtrace
 1/34 Test  #2: test-backtrace ......................   Passed    0.83 sec
      Start  4: test-boutpp-collect
 2/34 Test  #4: test-boutpp-collect .................   Passed    1.55 sec
      Start  5: test-boutpp-collect-staggered
 3/34 Test  #5: test-boutpp-collect-staggered .......   Passed    1.55 sec
      Start  6: test-boutpp-legacy-model
 4/34 Test  #6: test-boutpp-legacy-model ............   Passed    1.64 sec
      Start  7: test-boutpp-mms-ddz
 5/34 Test  #7: test-boutpp-mms-ddz .................   Passed    1.47 sec
      Start  8: test-boutpp-print
 6/34 Test  #8: test-boutpp-print ...................   Passed    1.48 sec
      Start  9: test-boutpp-simple-model
 7/34 Test  #9: test-boutpp-simple-model ............   Passed    1.66 sec
      Start 10: test-bout-override-default-option
 8/34 Test #10: test-bout-override-default-option ...   Passed    0.28 sec
      Start 11: test-command-args
 9/34 Test #11: test-command-args ...................   Passed   15.78 sec
      Start 12: test-communications
10/34 Test #12: test-communications .................   Passed   10.85 sec
      Start 13: test-coordinates-initialization
11/34 Test #13: test-coordinates-initialization .....   Passed    1.58 sec
      Start 14: test-cyclic
12/34 Test #14: test-cyclic .........................   Passed   20.18 sec
      Start 15: test-delp2
13/34 Test #15: test-delp2 ..........................   Passed   21.37 sec
      Start 16: test-datafile-facade
14/34 Test #16: test-datafile-facade ................   Passed    4.20 sec
      Start 17: test-fci-boundary
15/34 Test #17: test-fci-boundary ...................   Passed    3.60 sec
      Start 18: test-griddata
16/34 Test #18: test-griddata .......................   Passed    1.97 sec
      Start 19: test-griddata-yboundary-guards
17/34 Test #19: test-griddata-yboundary-guards ......   Passed   10.52 sec
      Start 20: test-initial
18/34 Test #20: test-initial ........................   Passed   10.45 sec
      Start 21: test-interpolate
19/34 Test #21: test-interpolate ....................   Passed   18.91 sec
      Start 22: test-interpolate-z
20/34 Test #22: test-interpolate-z ..................   Passed    6.63 sec
      Start 23: test-laplace-petsc3d
21/34 Test #23: test-laplace-petsc3d ................   Passed   10.90 sec
      Start 24: test-options-netcdf
22/34 Test #24: test-options-netcdf .................   Passed    1.95 sec
      Start 25: test-restart-io
23/34 Test #25: test-restart-io .....................   Passed    6.18 sec
      Start 26: test-restarting
24/34 Test #26: test-restarting .....................   Passed    8.32 sec
      Start 27: test-smooth
25/34 Test #27: test-smooth .........................   Passed    6.62 sec
      Start 28: test-solver
26/34 Test #28: test-solver .........................   Passed    2.98 sec
      Start 29: test-squash
27/34 Test #29: test-squash .........................   Passed   15.19 sec
      Start 30: test-stopCheck
28/34 Test #30: test-stopCheck ......................   Passed    0.38 sec
      Start 31: test-stopCheck-file
29/34 Test #31: test-stopCheck-file .................   Passed    7.64 sec
      Start 32: test-twistshift
30/34 Test #32: test-twistshift .....................   Passed    2.00 sec
      Start 33: test-twistshift-staggered
31/34 Test #33: test-twistshift-staggered ...........   Passed    1.99 sec
      Start 34: test-vec
32/34 Test #34: test-vec ............................   Passed    1.75 sec
      Start 35: test-yupdown
33/34 Test #35: test-yupdown ........................   Passed    3.52 sec
      Start 36: test-yupdown-weights
34/34 Test #36: test-yupdown-weights ................   Passed    2.01 sec

100% tests passed, 0 tests failed out of 34

Total Test time (real) = 207.95 sec
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
Built target check-integrated-tests
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi'
+ popd
~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
unset MPI_MAN;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset _LMFILES_;
unset LOADEDMODULES;
unset CMAKE_PREFIX_PATH;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset CMAKE_PREFIX_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in openmpi mpich
+ fail=1
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ pushd build_mpich
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
+ export HDF5_USE_FILE_LOCKING=FALSE
+ HDF5_USE_FILE_LOCKING=FALSE
+ sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest
#!/bin/bash

# Cores: 3

make || exit

test -z $MPIRUN  && MPIRUN='mpirun -np'
# Kill the test after 3 seconds, if it hasn't already exited
OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization

e=$?

if test $e -ne 0
then
    echo "The test failed. That can be caused by a timeout."
    echo "If this test is run on high load, it may fail occasionally."
    echo "The load is:"
    uptime
fi

exit $e
+ make -j4 build-check
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 build-check
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 76
make  -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  0%] Creating test-fci-boundary grid file
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib: /usr/bin/python3.13 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/grid.fci.nc
[  3%] Built target pvode
[  3%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/src/gtest-all.cc
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  5%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 48%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 48%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y/wave.cxx
[ 48%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection/advection.cxx
[ 48%] Linking CXX executable wave
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
Making curvilinear poloidal grid
creating grid...
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 48%] Built target MMS-wave-1d-y
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
[ 48%] Built target test-fci-boundary-grid
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 48%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion/diffusion.cxx
[ 48%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci/fci_mms.cxx
[ 48%] Linking CXX executable advection
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 48%] Built target MMS-advection
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 48%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d/wave.cxx
[ 48%] Linking CXX executable fci_mms
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../../lib/libpvpre.so.1.0.0 ../../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 50%] Linking CXX executable cyto
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 50%] Built target MMS-spatial-fci
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 50%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 50%] Built target MMS-diffusion
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 52%] Built target boutpp.cpython-313-x86_64-linux-gnu
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 52%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace/boutexcept.cxx
[ 53%] Linking CXX executable wave
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 55%] Linking CXX executable boutexcept
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 55%] Built target test-backtrace
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 56%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler/test_beuler.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 56%] Built target MMS-wave-1d
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 56%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx
[ 56%] Linking CXX executable test_yupdown_weights
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 56%] Built target test-yupdown-weights
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 57%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args/command-args.cxx
[ 57%] Linking CXX shared library ../../../../../lib/libgtest.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.16.0 -o ../../../../../lib/libgtest.so.1.16.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o"
[ 57%] Linking CXX executable command-args
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 57%] Linking CXX executable test_beuler
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 57%] Linking CXX executable test-bout-override-default-option
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 57%] Built target test-command-args
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 57%] Built target test-bout-override-default-option
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 57%] Built target test_beuler
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 57%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications/test-communications.cxx
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 59%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 59%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic/test_cyclic.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 59%] Built target gtest
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 59%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2/test_delp2.cxx
[ 59%] Linking CXX executable test-coordinates-initialization
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 59%] Built target test-coordinates-initialization
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 60%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade/test-datafile-facade.cxx
[ 60%] Linking CXX executable test-communications
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 60%] Built target test-communications
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 60%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata/test_griddata.cxx
[ 61%] Linking CXX executable test_delp2
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 61%] Linking CXX executable test_cyclic
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 61%] Linking CXX executable test-datafile-facade
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 61%] Built target test-delp2
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 61%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx
[ 63%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 63%] Built target test-datafile-facade
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 63%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial/test_initial.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 63%] Built target test-cyclic
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 63%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate/test_interpolate.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 63%] Built target test-griddata
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 63%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z/test_interpolate.cxx
[ 63%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 64%] Linking CXX executable test_initial
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 64%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 64%] Built target test-initial
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 65%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf/test-options-netcdf.cxx
[ 65%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 67%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 67%] Built target test-interpolate
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 67%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io/test-restart-io.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 67%] Built target test-interpolate-z
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 68%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting/test_restarting.cxx
[ 68%] Linking CXX executable test-options-netcdf
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 68%] Linking CXX executable test-laplace3d
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 68%] Built target test-options-netcdf
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 68%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth/test_smooth.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 68%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver/test_solver.cxx
[ 69%] Linking CXX executable test_restarting
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 69%] Linking CXX executable test-restart-io
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Built target test-restarting
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash/squash.cxx
[ 69%] Linking CXX executable test_smooth
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Built target test-restart-io
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck/test_stopCheck.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Built target test-smooth
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file/test_stopCheck.cxx
[ 71%] Linking CXX executable squash
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 71%] Built target test-squash
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 71%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift/test-twistshift.cxx
[ 71%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 71%] Linking CXX executable test_solver
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 72%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 72%] Built target test-stopCheck
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 72%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered/test-twistshift.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 72%] Built target test-stopCheck-file
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 72%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec/testVec.cxx
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 72%] Built target test-solver
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 73%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown/test_yupdown.cxx
[ 73%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 73%] Built target test-twistshift
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 73%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx
[ 75%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 75%] Built target test-twistshift-staggered
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 75%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/src/gmock-all.cc
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Field3D>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   14 |   for (int i = 0; i < fields.size(); i++) {
      |                   ~~^~~~~~~~~~~~~~~
[ 75%] Linking CXX executable testVec
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
[ 75%] Linking CXX executable test_yupdown
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 75%] Built target test-vec
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 76%] Building python interface
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 76%] Built target boutpp
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 76%] Built target test-yupdown
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 76%] Built target build-check-integrated-tests
[ 77%] Linking CXX executable get_par_bndry
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 77%] Built target test-fci-boundary
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 77%] Built target build-check-mms-tests
[ 77%] Linking CXX shared library ../../../../../lib/libgmock.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.16.0 -o ../../../../../lib/libgmock.so.1.16.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o"  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../../../lib/libgtest.so.1.16.0
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 77%] Built target gmock
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
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make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 77%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field2d.cxx
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field3d.cxx
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable]
   29 |   bout::HypreLib hyprelib{};
      |                  ^~~~~~~~
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field_factory.cxx
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldgroup.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldperp.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_initialprofiles.cxx
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[ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_where.cxx.o
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_petsc_indexer.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_boundary_factory.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_boutmesh.cxx
[ 90%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_coordinates.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_coordinates_accessor.cxx
[ 92%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_interpolation.cxx
[ 92%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_invert3x3.cxx
[ 92%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_mesh.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_options_fields.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_optionsreader.cxx
[ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_output.cxx.o
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_output.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_output.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_output.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_range.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_range.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_range.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_type_name.cxx
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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_utils.cxx
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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_raja.cxx:96:7: warning: multi-line comment [-Wcomment]
   96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall  under \
      |       ^
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/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o 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CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests  -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../lib/libgmock.so.1.16.0 ../../lib/libbout++.so.5.2.0 ../../lib/libgtest.so.1.16.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl
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make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target build-check-unit-tests
make  -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target build-check
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
+ SEGFAULT_SIGNALS=segv
+ make check-unit-tests
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 check-unit-tests
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 54
make  -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  0%] Built target gtest
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  5%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  7%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 68%] Built target bout++
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 68%] Built target gmock
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target serial_tests
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target build-check-unit-tests
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
ctest -R serial_tests --output-on-failure
Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich
    Start 1: serial_tests
1/1 Test #1: serial_tests .....................   Passed    3.71 sec

100% tests passed, 0 tests failed out of 1

Total Test time (real) =   3.71 sec
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target check-unit-tests
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
+ SEGFAULT_SIGNALS=segv
+ make check-mms-tests
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 check-mms-tests
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 40
make  -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  7%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 10%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 92%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 92%] Built target MMS-wave-1d-y
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 92%] Built target test-fci-boundary-grid
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 95%] Built target test-fci-boundary
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 95%] Built target MMS-advection
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 97%] Built target MMS-diffusion
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 97%] Built target MMS-spatial-fci
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target MMS-wave-1d
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target build-check-mms-tests
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
ctest -R MMS- --output-on-failure
Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich
    Start 37: MMS-diffusion
1/8 Test #37: MMS-diffusion ....................   Passed    8.94 sec
    Start 38: MMS-spatial-fci
2/8 Test #38: MMS-spatial-fci ..................   Passed    3.59 sec
    Start 39: MMS-wave-1d
3/8 Test #39: MMS-wave-1d ......................   Passed    7.53 sec
    Start 40: MMS-wave-1d-y
4/8 Test #40: MMS-wave-1d-y ....................   Passed    5.38 sec
    Start 41: MMS-bracket
5/8 Test #41: MMS-bracket ......................   Passed    0.42 sec
    Start 42: MMS-derivatives3
6/8 Test #42: MMS-derivatives3 .................   Passed    0.70 sec
    Start 43: MMS-shiftedmetricinterp
7/8 Test #43: MMS-shiftedmetricinterp ..........   Passed   12.10 sec
    Start 44: MMS-upwinding3
8/8 Test #44: MMS-upwinding3 ...................   Passed    0.99 sec

100% tests passed, 0 tests failed out of 8

Total Test time (real) =  39.65 sec
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
Built target check-mms-tests
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
+ SEGFAULT_SIGNALS=segv
+ make check-integrated-tests
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 check-integrated-tests
make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 56
make  -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all
make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  5%] Built target pvode
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[  7%] Built target pvpre
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 66%] Built target bout++
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 66%] Built target test-yupdown-weights
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 69%] Built target boutpp.cpython-313-x86_64-linux-gnu
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 71%] Building python interface
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 71%] Built target boutpp
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 73%] Built target test-backtrace
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 75%] Built target test_beuler
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 75%] Built target test-bout-override-default-option
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 76%] Built target test-command-args
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 76%] Built target test-communications
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 78%] Built target test-coordinates-initialization
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 78%] Built target test-cyclic
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 80%] Built target test-delp2
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 82%] Built target test-datafile-facade
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 83%] Built target test-griddata
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 83%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 85%] Built target test-initial
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 85%] Built target test-interpolate
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 87%] Built target test-interpolate-z
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 87%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 89%] Built target test-options-netcdf
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 89%] Built target test-restart-io
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 91%] Built target test-restarting
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 91%] Built target test-smooth
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 92%] Built target test-solver
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 94%] Built target test-squash
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 94%] Built target test-stopCheck
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 96%] Built target test-stopCheck-file
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 96%] Built target test-twistshift
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 98%] Built target test-twistshift-staggered
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[ 98%] Built target test-vec
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target test-yupdown
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
[100%] Built target build-check-integrated-tests
make  -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
make  -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
ctest -R test- --output-on-failure
Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich
      Start  2: test-backtrace
 1/34 Test  #2: test-backtrace ......................   Passed    0.75 sec
      Start  4: test-boutpp-collect
 2/34 Test  #4: test-boutpp-collect .................   Passed    0.47 sec
      Start  5: test-boutpp-collect-staggered
 3/34 Test  #5: test-boutpp-collect-staggered .......   Passed    0.47 sec
      Start  6: test-boutpp-legacy-model
 4/34 Test  #6: test-boutpp-legacy-model ............   Passed    0.56 sec
      Start  7: test-boutpp-mms-ddz
 5/34 Test  #7: test-boutpp-mms-ddz .................   Passed    0.40 sec
      Start  8: test-boutpp-print
 6/34 Test  #8: test-boutpp-print ...................   Passed    0.39 sec
      Start  9: test-boutpp-simple-model
 7/34 Test  #9: test-boutpp-simple-model ............   Passed    0.58 sec
      Start 10: test-bout-override-default-option
 8/34 Test #10: test-bout-override-default-option ...   Passed    0.23 sec
      Start 11: test-command-args
 9/34 Test #11: test-command-args ...................   Passed    4.48 sec
      Start 12: test-communications
10/34 Test #12: test-communications .................   Passed    8.28 sec
      Start 13: test-coordinates-initialization
11/34 Test #13: test-coordinates-initialization .....   Passed    0.49 sec
      Start 14: test-cyclic
12/34 Test #14: test-cyclic .........................   Passed    4.65 sec
      Start 15: test-delp2
13/34 Test #15: test-delp2 ..........................   Passed    8.07 sec
      Start 16: test-datafile-facade
14/34 Test #16: test-datafile-facade ................   Passed    1.96 sec
      Start 17: test-fci-boundary
15/34 Test #17: test-fci-boundary ...................   Passed    2.41 sec
      Start 18: test-griddata
16/34 Test #18: test-griddata .......................   Passed    0.82 sec
      Start 19: test-griddata-yboundary-guards
17/34 Test #19: test-griddata-yboundary-guards ......   Passed    5.83 sec
      Start 20: test-initial
18/34 Test #20: test-initial ........................   Passed    6.02 sec
      Start 21: test-interpolate
19/34 Test #21: test-interpolate ....................   Passed    5.61 sec
      Start 22: test-interpolate-z
20/34 Test #22: test-interpolate-z ..................   Passed    2.17 sec
      Start 23: test-laplace-petsc3d
21/34 Test #23: test-laplace-petsc3d ................   Passed    6.44 sec
      Start 24: test-options-netcdf
22/34 Test #24: test-options-netcdf .................   Passed    0.80 sec
      Start 25: test-restart-io
23/34 Test #25: test-restart-io .....................   Passed    2.81 sec
      Start 26: test-restarting
24/34 Test #26: test-restarting .....................   Passed    2.76 sec
      Start 27: test-smooth
25/34 Test #27: test-smooth .........................   Passed    2.17 sec
      Start 28: test-solver
26/34 Test #28: test-solver .........................   Passed    1.91 sec
      Start 29: test-squash
27/34 Test #29: test-squash .........................   Passed    7.22 sec
      Start 30: test-stopCheck
28/34 Test #30: test-stopCheck ......................   Passed    0.33 sec
      Start 31: test-stopCheck-file
29/34 Test #31: test-stopCheck-file .................   Passed    2.75 sec
      Start 32: test-twistshift
30/34 Test #32: test-twistshift .....................   Passed    0.85 sec
      Start 33: test-twistshift-staggered
31/34 Test #33: test-twistshift-staggered ...........   Passed    0.84 sec
      Start 34: test-vec
32/34 Test #34: test-vec ............................   Passed    0.66 sec
      Start 35: test-yupdown
33/34 Test #35: test-yupdown ........................   Passed    1.26 sec
      Start 36: test-yupdown-weights
34/34 Test #36: test-yupdown-weights ................   Passed    0.85 sec

100% tests passed, 0 tests failed out of 34

Total Test time (real) =  86.31 sec
make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
Built target check-integrated-tests
make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0
make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich'
+ popd
~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: bout++-mpich-5.2.0-1.fc41.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.4taE0B
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd BOUT++-v5.2.0
+ DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.y89dVc
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd BOUT++-v5.2.0
+ LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-mpich = 5.2.0-1.fc41 bout++-mpich(x86-64) = 5.2.0-1.fc41 bundled(libpvode) libbout++.so.5.2.0()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.20()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(mpich-x86_64) libsundials_cvode.so.6()(64bit)(mpich-x86_64) libsundials_ida.so.6()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.6()(64bit)(mpich-x86_64) rtld(GNU_HASH)
Recommends: environment-modules python3-boutdata python3-boututils python3-xbout
Processing files: bout++-mpich-devel-5.2.0-1.fc41.x86_64
Provides: bout++-mpich-devel = 5.2.0-1.fc41 bout++-mpich-devel(x86-64) = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel
Processing files: python3-bout++-mpich-5.2.0-1.fc41.x86_64
Provides: libboutpp.cpython-313-x86_64-linux-gnu.so()(64bit)(mpich-x86_64) python-bout++-mpich = 5.2.0-1.fc41 python3-bout++-mpich = 5.2.0-1.fc41 python3-bout++-mpich(x86-64) = 5.2.0-1.fc41 python3.13-bout++-mpich = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.5.2.0()(64bit)(mpich-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH)
Recommends: python3-xbout
Processing files: bout++-openmpi-5.2.0-1.fc41.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.NqXCjS
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd BOUT++-v5.2.0
+ DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.wuSNel
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd BOUT++-v5.2.0
+ LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-openmpi = 5.2.0-1.fc41 bout++-openmpi(x86-64) = 5.2.0-1.fc41 bundled(libpvode) libbout++.so.5.2.0()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.20()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(openmpi-x86_64) libsundials_cvode.so.6()(64bit)(openmpi-x86_64) libsundials_ida.so.6()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.6()(64bit)(openmpi-x86_64) rtld(GNU_HASH)
Recommends: environment-modules python3-boutdata python3-boututils python3-xbout
Processing files: bout++-openmpi-devel-5.2.0-1.fc41.x86_64
Provides: bout++-openmpi-devel = 5.2.0-1.fc41 bout++-openmpi-devel(x86-64) = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel
Processing files: python3-bout++-openmpi-5.2.0-1.fc41.x86_64
Provides: libboutpp.cpython-313-x86_64-linux-gnu.so()(64bit)(openmpi-x86_64) python-bout++-openmpi = 5.2.0-1.fc41 python3-bout++-openmpi = 5.2.0-1.fc41 python3-bout++-openmpi(x86-64) = 5.2.0-1.fc41 python3.13-bout++-openmpi = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.5.2.0()(64bit)(openmpi-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH)
Recommends: python3-xbout
Processing files: bout++-common-5.2.0-1.fc41.x86_64
Provides: bout++-common = 5.2.0-1.fc41 bout++-common(x86-64) = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python3-bout++-5.2.0-1.fc41.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.HEGaoM
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd BOUT++-v5.2.0
+ DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.48phAR
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ cd BOUT++-v5.2.0
+ LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++
+ cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-bout++ = 5.2.0-1.fc41 python3-bout++ = 5.2.0-1.fc41 python3.13-bout++ = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: python3-boutdata python3-boututils python3-matplotlib python3-scipy
Processing files: bout++-doc-5.2.0-1.fc41.noarch
Provides: bout++-doc = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debugsource-5.2.0-1.fc41.x86_64
Provides: bout++-debugsource = 5.2.0-1.fc41 bout++-debugsource(x86-64) = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debuginfo-5.2.0-1.fc41.x86_64
Provides: bout++-debuginfo = 5.2.0-1.fc41 bout++-debuginfo(x86-64) = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.2.0-1.fc41
Processing files: bout++-mpich-debuginfo-5.2.0-1.fc41.x86_64
Provides: bout++-mpich-debuginfo = 5.2.0-1.fc41 bout++-mpich-debuginfo(x86-64) = 5.2.0-1.fc41 debuginfo(build-id) = 10c62afc3e3fef48e234154ad397b9960cb53844 debuginfo(build-id) = 1727d5c1ccde1233a0fd5c56869de65ad2aefb16 debuginfo(build-id) = c1784ab4b8e911f5c331308dcd64256550d7efca
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.2.0-1.fc41
Processing files: python3-bout++-mpich-debuginfo-5.2.0-1.fc41.x86_64
Provides: debuginfo(build-id) = 17b79e68eb119b2ca1409c8506a866a3dcae74a5 python-bout++-mpich-debuginfo = 5.2.0-1.fc41 python3-bout++-mpich-debuginfo = 5.2.0-1.fc41 python3-bout++-mpich-debuginfo(x86-64) = 5.2.0-1.fc41 python3.13-bout++-mpich-debuginfo = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.2.0-1.fc41
Processing files: bout++-openmpi-debuginfo-5.2.0-1.fc41.x86_64
Provides: bout++-openmpi-debuginfo = 5.2.0-1.fc41 bout++-openmpi-debuginfo(x86-64) = 5.2.0-1.fc41 debuginfo(build-id) = 47d96d44c5daa4dc04b053474690c8e87246a64c debuginfo(build-id) = 97ad1c6f5b78dffab56ad037c1b0006a31c66f13 debuginfo(build-id) = a80fe5d811f7e39a2f7aa00f67009c89bf015216
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.2.0-1.fc41
Processing files: python3-bout++-openmpi-debuginfo-5.2.0-1.fc41.x86_64
Provides: debuginfo(build-id) = f4d3341f49cf9d18948d67d9ed207deaac6418f3 python-bout++-openmpi-debuginfo = 5.2.0-1.fc41 python3-bout++-openmpi-debuginfo = 5.2.0-1.fc41 python3-bout++-openmpi-debuginfo(x86-64) = 5.2.0-1.fc41 python3.13-bout++-openmpi-debuginfo = 5.2.0-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.2.0-1.fc41
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT
Wrote: /builddir/build/RPMS/bout++-debugsource-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debuginfo-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-doc-5.2.0-1.fc41.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-devel-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-devel-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-5.2.0-1.fc41.noarch.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-common-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-5.2.0-1.fc41.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-5.2.0-1.fc41.x86_64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.HgImBA
+ umask 022
+ cd /builddir/build/BUILD/bout++-5.2.0-build
+ test -d /builddir/build/BUILD/bout++-5.2.0-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/bout++-5.2.0-build
+ rm -rf /builddir/build/BUILD/bout++-5.2.0-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild bout++-5.2.0-1.fc41.src.rpm
Finish: build phase for bout++-5.2.0-1.fc41.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-41-x86_64-1761740611.709676/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
INFO: Done(/var/lib/copr-rpmbuild/results/bout++-5.2.0-1.fc41.src.rpm) Config(child) 24 minutes 21 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "python3-bout++-mpich-debuginfo",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-openmpi",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++-openmpi",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-debugsource",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-doc",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "noarch"
        },
        {
            "name": "bout++",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "src"
        },
        {
            "name": "python3-bout++-mpich",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-openmpi-devel",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-common",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++-openmpi-debuginfo",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich-debuginfo",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-openmpi-debuginfo",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "noarch"
        },
        {
            "name": "bout++-debuginfo",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich-devel",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich",
            "epoch": null,
            "version": "5.2.0",
            "release": "1.fc41",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished