Warning: Permanently added '3.237.75.2' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8116798-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.0 PID: 7607 Logging PID: 7608 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 8116798, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '422b33d0923ba07f8c5da3a2599cf39b7b323a79', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/davidsch/testing-all/bout++', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'bout++', 'package_version': '5.2.0.dev574+ge3f21cd2f-1', 'project_dirname': 'testing-all', 'project_name': 'testing-all', 'project_owner': 'davidsch', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/davidsch/testing-all/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'davidsch/testing-all--davidsch', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'davidsch', 'tags': [], 'task_id': '8116798-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/davidsch/testing-all/bout++ /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++ --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/davidsch/testing-all/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++'... Running: git checkout 422b33d0923ba07f8c5da3a2599cf39b7b323a79 -- cmd: ['git', 'checkout', '422b33d0923ba07f8c5da3a2599cf39b7b323a79', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++ rc: 0 stdout: stderr: Note: switching to '422b33d0923ba07f8c5da3a2599cf39b7b323a79'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 422b33d automatic import of bout++ Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++ rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BOUT++-v5.2.0.dev574+ge3f21cd2f.tar.xz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BOUT++-v5.2.0.dev574+ge3f21cd2f.tar.xz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/davidsch/testing-all/bout++/BOUT++-v5.2.0.dev574+ge3f21cd2f.tar.xz/md5/9ba4a2715a4391e6da27ac26f64eb3f4/BOUT++-v5.2.0.dev574+ge3f21cd2f.tar.xz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 12.1M 100 12.1M 0 0 367M 0 --:--:-- --:--:-- --:--:-- 368M INFO: Reading stdout from command: md5sum BOUT++-v5.2.0.dev574+ge3f21cd2f.tar.xz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728371978.266791 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728371978.266791 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++/bout++.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728371978.266791/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728371978.266791/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/29320aea00754d1ab0bbc69f7d18b93f946d037226de42629e2e37282b4fffc1/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/29320aea00754d1ab0bbc69f7d18b93f946d037226de42629e2e37282b4fffc1/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1728371978.266791/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc42.x86_64 dnf5-plugins-5.2.6.2-1.fc42.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 30.8 MiB/s | 21.9 MiB | 00m01s Copr repository 100% | 170.4 KiB/s | 9.4 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-2.fc42 fedora 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB coreutils x86_64 9.5-10.fc42 fedora 5.7 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 42-0.3 fedora 19.4 KiB findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.40.9000-1.fc42 fedora 0.0 B grep x86_64 3.11-9.fc41 fedora 1.0 MiB gzip x86_64 1.13-2.fc41 fedora 389.0 KiB info x86_64 7.1.1-1.fc42 fedora 361.9 KiB patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB redhat-rpm-config noarch 296-1.fc42 fedora 186.6 KiB rpm-build x86_64 4.19.94-1.fc42 fedora 194.3 KiB sed x86_64 4.9-3.fc41 fedora 861.5 KiB shadow-utils x86_64 2:4.16.0-4.fc42 fedora 4.1 MiB tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB unzip x86_64 6.0-64.fc41 fedora 386.8 KiB util-linux x86_64 2.40.2-8.fc42 fedora 3.7 MiB which x86_64 2.21-42.fc41 fedora 80.2 KiB xz x86_64 1:5.6.3-1.fc42 fedora 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-1.fc41 fedora 2.2 MiB alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 fedora 331.3 KiB authselect x86_64 1.5.0-7.fc41 fedora 153.5 KiB authselect-libs x86_64 1.5.0-7.fc41 fedora 818.3 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils x86_64 2.43.1-1.fc42 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-2.fc42 fedora 2.6 MiB coreutils-common x86_64 9.5-10.fc42 fedora 11.2 MiB cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB crypto-policies noarch 20240927-1.git93b7251.fc42 fedora 136.8 KiB curl x86_64 8.10.1-2.fc42 fedora 453.3 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB debugedit x86_64 5.0-17.fc41 fedora 199.3 KiB dwz x86_64 0.15-7.fc41 fedora 290.9 KiB ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils x86_64 0.191-8.fc41 fedora 2.6 MiB elfutils-debuginfod-client x86_64 0.191-8.fc41 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB elfutils-libelf x86_64 0.191-8.fc41 fedora 1.2 MiB elfutils-libs x86_64 0.191-8.fc41 fedora 646.2 KiB fedora-gpg-keys noarch 42-0.2 fedora 126.4 KiB fedora-release noarch 42-0.3 fedora 0.0 B fedora-release-identity-basic noarch 42-0.3 fedora 694.0 B fedora-repos noarch 42-0.2 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.2 fedora 2.2 KiB file x86_64 5.45-7.fc41 fedora 103.5 KiB file-libs x86_64 5.45-7.fc41 fedora 9.9 MiB filesystem x86_64 3.18-29.fc42 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal x86_64 15.1-2.fc42 fedora 13.0 MiB gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc x86_64 2.40.9000-1.fc42 fedora 6.7 MiB glibc-common x86_64 2.40.9000-1.fc42 fedora 1.0 MiB glibc-gconv-extra x86_64 2.40.9000-1.fc42 fedora 8.1 MiB gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB krb5-libs x86_64 1.21.3-2.fc41 fedora 2.3 MiB libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB libarchive x86_64 3.7.6-1.fc42 fedora 934.8 KiB libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB libblkid x86_64 2.40.2-8.fc42 fedora 262.5 KiB libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB libcap x86_64 2.70-4.fc41 fedora 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 fedora 69.2 KiB libcom_err x86_64 1.47.1-3.fc41 fedora 67.2 KiB libcurl x86_64 8.10.1-2.fc42 fedora 838.4 KiB libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB libfdisk x86_64 2.40.2-8.fc42 fedora 362.9 KiB libffi x86_64 3.4.6-3.fc42 fedora 86.4 KiB libgcc x86_64 14.2.1-4.fc42 fedora 274.6 KiB libgomp x86_64 14.2.1-4.fc42 fedora 523.8 KiB libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB libmount x86_64 2.40.2-8.fc42 fedora 355.8 KiB libnghttp2 x86_64 1.63.0-1.fc42 fedora 170.1 KiB libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB libpkgconf x86_64 2.3.0-1.fc42 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB libselinux x86_64 3.7-6.fc42 fedora 181.1 KiB libsemanage x86_64 3.7-3.fc42 fedora 298.0 KiB libsepol x86_64 3.7-3.fc42 fedora 818.0 KiB libsmartcols x86_64 2.40.2-8.fc42 fedora 180.4 KiB libssh x86_64 0.11.1-1.fc42 fedora 569.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ x86_64 14.2.1-4.fc42 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB libtirpc x86_64 1.3.5-0.fc41 fedora 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB libuuid x86_64 2.40.2-8.fc42 fedora 41.4 KiB libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB libxcrypt x86_64 4.4.36-7.fc41 fedora 266.8 KiB libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB openssl-libs x86_64 1:3.2.2-8.fc42 fedora 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam x86_64 1.6.1-6.fc42 fedora 1.8 MiB pam-libs x86_64 1.6.1-6.fc42 fedora 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf x86_64 2.3.0-1.fc42 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc42 fedora 989.0 B popt x86_64 1.19-7.fc41 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B readline x86_64 8.2-11.fc42 fedora 493.1 KiB rpm x86_64 4.19.94-1.fc42 fedora 3.1 MiB rpm-build-libs x86_64 4.19.94-1.fc42 fedora 206.7 KiB rpm-libs x86_64 4.19.94-1.fc42 fedora 722.1 KiB rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.46.0-4.fc41 fedora 1.4 MiB systemd-libs x86_64 256.5-1.fc42 fedora 2.0 MiB util-linux-core x86_64 2.40.2-8.fc42 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc42 fedora 88.4 KiB xz-libs x86_64 1:5.6.3-1.fc42 fedora 218.3 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip x86_64 3.0-41.fc41 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc42 fedora 138.0 KiB zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B). [ 1/153] bzip2-0:1.0.8-19.fc41.x86_64 100% | 4.7 MiB/s | 52.5 KiB | 00m00s [ 2/153] coreutils-0:9.5-10.fc42.x86_6 100% | 85.1 MiB/s | 1.1 MiB | 00m00s [ 3/153] bash-0:5.2.32-2.fc42.x86_64 100% | 106.3 MiB/s | 1.8 MiB | 00m00s [ 4/153] cpio-0:2.15-2.fc41.x86_64 100% | 47.5 MiB/s | 291.8 KiB | 00m00s [ 5/153] diffutils-0:3.10-8.fc41.x86_6 100% | 99.0 MiB/s | 405.4 KiB | 00m00s [ 6/153] fedora-release-common-0:42-0. 100% | 22.5 MiB/s | 23.0 KiB | 00m00s [ 7/153] grep-0:3.11-9.fc41.x86_64 100% | 146.4 MiB/s | 299.8 KiB | 00m00s [ 8/153] findutils-1:4.10.0-4.fc41.x86 100% | 133.9 MiB/s | 548.6 KiB | 00m00s [ 9/153] gzip-0:1.13-2.fc41.x86_64 100% | 83.1 MiB/s | 170.2 KiB | 00m00s [ 10/153] info-0:7.1.1-1.fc42.x86_64 100% | 89.3 MiB/s | 182.8 KiB | 00m00s [ 11/153] patch-0:2.7.6-25.fc41.x86_64 100% | 63.9 MiB/s | 131.0 KiB | 00m00s [ 12/153] redhat-rpm-config-0:296-1.fc4 100% | 40.3 MiB/s | 82.4 KiB | 00m00s [ 13/153] rpm-build-0:4.19.94-1.fc42.x8 100% | 40.6 MiB/s | 83.1 KiB | 00m00s [ 14/153] sed-0:4.9-3.fc41.x86_64 100% | 103.4 MiB/s | 317.7 KiB | 00m00s [ 15/153] shadow-utils-2:4.16.0-4.fc42. 100% | 219.4 MiB/s | 1.3 MiB | 00m00s [ 16/153] glibc-minimal-langpack-0:2.40 100% | 6.9 MiB/s | 120.9 KiB | 00m00s [ 17/153] which-0:2.21-42.fc41.x86_64 100% | 40.6 MiB/s | 41.6 KiB | 00m00s [ 18/153] unzip-0:6.0-64.fc41.x86_64 100% | 36.1 MiB/s | 184.9 KiB | 00m00s [ 19/153] tar-2:1.35-4.fc41.x86_64 100% | 64.7 MiB/s | 860.7 KiB | 00m00s [ 20/153] xz-1:5.6.3-1.fc42.x86_64 100% | 77.3 MiB/s | 475.1 KiB | 00m00s [ 21/153] gawk-0:5.3.0-4.fc41.x86_64 100% | 133.9 MiB/s | 1.1 MiB | 00m00s [ 22/153] util-linux-0:2.40.2-8.fc42.x8 100% | 166.1 MiB/s | 1.2 MiB | 00m00s [ 23/153] filesystem-0:3.18-29.fc42.x86 100% | 155.3 MiB/s | 1.1 MiB | 00m00s [ 24/153] ncurses-libs-0:6.5-2.20240629 100% | 108.7 MiB/s | 334.0 KiB | 00m00s [ 25/153] bzip2-libs-0:1.0.8-19.fc41.x8 100% | 20.1 MiB/s | 41.1 KiB | 00m00s [ 26/153] gmp-1:6.3.0-2.fc41.x86_64 100% | 62.1 MiB/s | 318.0 KiB | 00m00s [ 27/153] glibc-0:2.40.9000-1.fc42.x86_ 100% | 160.3 MiB/s | 2.2 MiB | 00m00s [ 28/153] libacl-0:2.3.2-2.fc41.x86_64 100% | 8.0 MiB/s | 24.5 KiB | 00m00s [ 29/153] libattr-0:2.5.2-4.fc41.x86_64 100% | 5.9 MiB/s | 18.2 KiB | 00m00s [ 30/153] coreutils-common-0:9.5-10.fc4 100% | 151.6 MiB/s | 2.1 MiB | 00m00s [ 31/153] libcap-0:2.70-4.fc41.x86_64 100% | 16.9 MiB/s | 86.7 KiB | 00m00s [ 32/153] libselinux-0:3.7-6.fc42.x86_6 100% | 28.8 MiB/s | 88.6 KiB | 00m00s [ 33/153] fedora-repos-0:42-0.2.noarch 100% | 9.0 MiB/s | 9.2 KiB | 00m00s [ 34/153] systemd-libs-0:256.5-1.fc42.x 100% | 178.3 MiB/s | 730.4 KiB | 00m00s [ 35/153] glibc-common-0:2.40.9000-1.fc 100% | 80.0 MiB/s | 409.4 KiB | 00m00s [ 36/153] openssl-libs-1:3.2.2-8.fc42.x 100% | 231.0 MiB/s | 2.3 MiB | 00m00s [ 37/153] pcre2-0:10.44-1.fc41.1.x86_64 100% | 39.6 MiB/s | 243.1 KiB | 00m00s [ 38/153] ed-0:1.20.2-2.fc41.x86_64 100% | 26.6 MiB/s | 81.8 KiB | 00m00s [ 39/153] build-reproducibility-srpm-ma 100% | 3.5 MiB/s | 10.6 KiB | 00m00s [ 40/153] ansible-srpm-macros-0:1-16.fc 100% | 5.1 MiB/s | 20.8 KiB | 00m00s [ 41/153] dwz-0:0.15-7.fc41.x86_64 100% | 44.9 MiB/s | 138.0 KiB | 00m00s [ 42/153] efi-srpm-macros-0:5-12.fc41.n 100% | 10.9 MiB/s | 22.4 KiB | 00m00s [ 43/153] file-0:5.45-7.fc41.x86_64 100% | 24.0 MiB/s | 49.1 KiB | 00m00s [ 44/153] fonts-srpm-macros-1:2.0.5-17. 100% | 26.3 MiB/s | 27.0 KiB | 00m00s [ 45/153] forge-srpm-macros-0:0.4.0-1.f 100% | 19.3 MiB/s | 19.8 KiB | 00m00s [ 46/153] fpc-srpm-macros-0:1.3-13.fc41 100% | 7.8 MiB/s | 8.0 KiB | 00m00s [ 47/153] gnat-srpm-macros-0:6-6.fc41.n 100% | 8.7 MiB/s | 9.0 KiB | 00m00s [ 48/153] ghc-srpm-macros-0:1.9.2-1.fc4 100% | 4.5 MiB/s | 9.1 KiB | 00m00s [ 49/153] go-srpm-macros-0:3.6.0-3.fc41 100% | 27.3 MiB/s | 28.0 KiB | 00m00s [ 50/153] kernel-srpm-macros-0:1.0-24.f 100% | 9.6 MiB/s | 9.9 KiB | 00m00s [ 51/153] lua-srpm-macros-0:1-14.fc41.n 100% | 8.7 MiB/s | 8.9 KiB | 00m00s [ 52/153] ocaml-srpm-macros-0:10-3.fc41 100% | 9.0 MiB/s | 9.2 KiB | 00m00s [ 53/153] openblas-srpm-macros-0:2-18.f 100% | 7.5 MiB/s | 7.7 KiB | 00m00s [ 54/153] package-notes-srpm-macros-0:0 100% | 9.6 MiB/s | 9.8 KiB | 00m00s [ 55/153] perl-srpm-macros-0:1-56.fc41. 100% | 8.3 MiB/s | 8.5 KiB | 00m00s [ 56/153] pyproject-srpm-macros-0:1.15. 100% | 13.0 MiB/s | 13.3 KiB | 00m00s [ 57/153] python-srpm-macros-0:3.13-3.f 100% | 23.2 MiB/s | 23.7 KiB | 00m00s [ 58/153] qt5-srpm-macros-0:5.15.15-1.f 100% | 8.7 MiB/s | 8.9 KiB | 00m00s [ 59/153] qt6-srpm-macros-0:6.7.2-3.fc4 100% | 8.9 MiB/s | 9.1 KiB | 00m00s [ 60/153] rust-srpm-macros-0:26.3-3.fc4 100% | 11.8 MiB/s | 12.1 KiB | 00m00s [ 61/153] zig-srpm-macros-0:1-3.fc41.no 100% | 7.9 MiB/s | 8.1 KiB | 00m00s [ 62/153] rpm-0:4.19.94-1.fc42.x86_64 100% | 133.7 MiB/s | 547.8 KiB | 00m00s [ 63/153] zip-0:3.0-41.fc41.x86_64 100% | 86.2 MiB/s | 264.8 KiB | 00m00s [ 64/153] debugedit-0:5.0-17.fc41.x86_6 100% | 26.1 MiB/s | 80.1 KiB | 00m00s [ 65/153] elfutils-0:0.191-8.fc41.x86_6 100% | 129.3 MiB/s | 529.4 KiB | 00m00s [ 66/153] elfutils-libelf-0:0.191-8.fc4 100% | 67.6 MiB/s | 207.6 KiB | 00m00s [ 67/153] libarchive-0:3.7.6-1.fc42.x86 100% | 134.7 MiB/s | 413.7 KiB | 00m00s [ 68/153] popt-0:1.19-7.fc41.x86_64 100% | 32.2 MiB/s | 65.9 KiB | 00m00s [ 69/153] readline-0:8.2-11.fc42.x86_64 100% | 104.2 MiB/s | 213.4 KiB | 00m00s [ 70/153] rpm-build-libs-0:4.19.94-1.fc 100% | 48.4 MiB/s | 99.1 KiB | 00m00s [ 71/153] rpm-libs-0:4.19.94-1.fc42.x86 100% | 100.8 MiB/s | 309.6 KiB | 00m00s [ 72/153] zstd-0:1.5.6-2.fc41.x86_64 100% | 156.7 MiB/s | 481.5 KiB | 00m00s [ 73/153] audit-libs-0:4.0.2-1.fc41.x86 100% | 41.1 MiB/s | 126.2 KiB | 00m00s [ 74/153] libeconf-0:0.6.2-3.fc41.x86_6 100% | 15.7 MiB/s | 32.2 KiB | 00m00s [ 75/153] libsemanage-0:3.7-3.fc42.x86_ 100% | 57.2 MiB/s | 117.2 KiB | 00m00s [ 76/153] libxcrypt-0:4.4.36-7.fc41.x86 100% | 57.9 MiB/s | 118.5 KiB | 00m00s [ 77/153] pam-libs-0:1.6.1-6.fc42.x86_6 100% | 27.9 MiB/s | 57.2 KiB | 00m00s [ 78/153] setup-0:2.15.0-5.fc41.noarch 100% | 75.4 MiB/s | 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100% | 43.1 MiB/s | 88.4 KiB | 00m00s [ 92/153] glibc-gconv-extra-0:2.40.9000 100% | 242.1 MiB/s | 1.7 MiB | 00m00s [ 93/153] libsepol-0:3.7-3.fc42.x86_64 100% | 83.5 MiB/s | 342.2 KiB | 00m00s [ 94/153] ca-certificates-0:2024.2.69_v 100% | 153.7 MiB/s | 944.5 KiB | 00m00s [ 95/153] fedora-gpg-keys-0:42-0.2.noar 100% | 43.5 MiB/s | 133.6 KiB | 00m00s [ 96/153] crypto-policies-0:20240927-1. 100% | 15.8 MiB/s | 97.2 KiB | 00m00s [ 97/153] fedora-repos-rawhide-0:42-0.2 100% | 4.3 MiB/s | 8.7 KiB | 00m00s [ 98/153] pcre2-syntax-0:10.44-1.fc41.1 100% | 48.8 MiB/s | 149.9 KiB | 00m00s [ 99/153] add-determinism-0:0.3.6-1.fc4 100% | 166.4 MiB/s | 851.8 KiB | 00m00s [100/153] file-libs-0:5.45-7.fc41.x86_6 100% | 148.8 MiB/s | 762.0 KiB | 00m00s [101/153] curl-0:8.10.1-2.fc42.x86_64 100% | 43.2 MiB/s | 221.3 KiB | 00m00s [102/153] elfutils-libs-0:0.191-8.fc41. 100% | 83.8 MiB/s | 257.5 KiB | 00m00s [103/153] elfutils-debuginfod-client-0: 100% | 18.2 MiB/s | 37.2 KiB | 00m00s [104/153] 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56.3 KiB | 00m00s [117/153] libnsl2-0:2.0.1-2.fc41.x86_64 100% | 28.9 MiB/s | 29.6 KiB | 00m00s [118/153] libpwquality-0:1.4.5-11.fc41. 100% | 58.1 MiB/s | 119.1 KiB | 00m00s [119/153] libtirpc-0:1.3.5-0.fc41.x86_6 100% | 46.0 MiB/s | 94.2 KiB | 00m00s [120/153] cracklib-0:2.9.11-6.fc41.x86_ 100% | 89.9 MiB/s | 92.0 KiB | 00m00s [121/153] libcom_err-0:1.47.1-3.fc41.x8 100% | 25.8 MiB/s | 26.4 KiB | 00m00s [122/153] krb5-libs-0:1.21.3-2.fc41.x86 100% | 184.9 MiB/s | 757.4 KiB | 00m00s [123/153] keyutils-libs-0:1.6.3-4.fc41. 100% | 10.3 MiB/s | 31.6 KiB | 00m00s [124/153] libverto-0:0.3.2-9.fc41.x86_6 100% | 10.1 MiB/s | 20.7 KiB | 00m00s [125/153] alternatives-0:1.30-1.fc41.x8 100% | 41.5 MiB/s | 42.5 KiB | 00m00s [126/153] jansson-0:2.13.1-10.fc41.x86_ 100% | 21.7 MiB/s | 44.4 KiB | 00m00s [127/153] pkgconf-pkg-config-0:2.3.0-1. 100% | 9.8 MiB/s | 10.0 KiB | 00m00s [128/153] pkgconf-0:2.3.0-1.fc42.x86_64 100% | 14.7 MiB/s | 45.2 KiB | 00m00s [129/153] pkgconf-m4-0:2.3.0-1.fc42.noa 100% | 4.7 MiB/s | 14.3 KiB | 00m00s [130/153] libpkgconf-0:2.3.0-1.fc42.x86 100% | 18.8 MiB/s | 38.5 KiB | 00m00s [131/153] gdbm-1:1.23-7.fc41.x86_64 100% | 74.1 MiB/s | 151.8 KiB | 00m00s [132/153] libffi-0:3.4.6-3.fc42.x86_64 100% | 19.5 MiB/s | 40.0 KiB | 00m00s [133/153] p11-kit-0:0.25.5-3.fc41.x86_6 100% | 159.8 MiB/s | 490.9 KiB | 00m00s [134/153] libtasn1-0:4.19.0-9.fc41.x86_ 100% | 24.2 MiB/s | 74.2 KiB | 00m00s [135/153] p11-kit-trust-0:0.25.5-3.fc41 100% | 64.5 MiB/s | 132.1 KiB | 00m00s [136/153] binutils-0:2.43.1-1.fc42.x86_ 100% | 280.5 MiB/s | 6.5 MiB | 00m00s [137/153] fedora-release-0:42-0.3.noarc 100% | 1.7 MiB/s | 12.2 KiB | 00m00s [138/153] fedora-release-identity-basic 100% | 6.4 MiB/s | 13.0 KiB | 00m00s [139/153] libcurl-0:8.10.1-2.fc42.x86_6 100% | 90.7 MiB/s | 371.3 KiB | 00m00s [140/153] libbrotli-0:1.1.0-5.fc41.x86_ 100% | 110.8 MiB/s | 340.5 KiB | 00m00s [141/153] gdb-minimal-0:15.1-2.fc42.x86 100% | 205.4 MiB/s | 4.3 MiB | 00m00s [142/153] xxhash-libs-0:0.8.2-4.fc42.x8 100% | 2.4 MiB/s | 36.8 KiB | 00m00s [143/153] libidn2-0:2.3.7-2.fc41.x86_64 100% | 28.9 MiB/s | 118.4 KiB | 00m00s [144/153] libpsl-0:0.21.5-4.fc41.x86_64 100% | 20.9 MiB/s | 64.1 KiB | 00m00s [145/153] libnghttp2-0:1.63.0-1.fc42.x8 100% | 25.0 MiB/s | 76.7 KiB | 00m00s [146/153] libssh-0:0.11.1-1.fc42.x86_64 100% | 75.5 MiB/s | 231.9 KiB | 00m00s [147/153] publicsuffix-list-dafsa-0:202 100% | 56.9 MiB/s | 58.3 KiB | 00m00s [148/153] openldap-0:2.6.8-5.fc41.x86_6 100% | 83.2 MiB/s | 255.6 KiB | 00m00s [149/153] libunistring-0:1.1-8.fc41.x86 100% | 133.0 MiB/s | 544.8 KiB | 00m00s [150/153] libssh-config-0:0.11.1-1.fc42 100% | 4.6 MiB/s | 9.4 KiB | 00m00s [151/153] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 155.2 MiB/s | 794.9 KiB | 00m00s [152/153] libtool-ltdl-0:2.4.7-12.fc41. 100% | 8.7 MiB/s | 35.6 KiB | 00m00s [153/153] libevent-0:2.1.12-14.fc41.x86 100% | 62.9 MiB/s | 257.5 KiB | 00m00s -------------------------------------------------------------------------------- [153/153] Total 100% | 108.8 MiB/s | 53.2 MiB | 00m00s Running transaction Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/155] Verify package files 100% | 962.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 4.5 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-4. 100% | 269.8 MiB/s | 276.3 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 7/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/155] Installing fedora-gpg-keys-0: 100% | 56.1 MiB/s | 172.2 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 64.5 MiB/s | 726.1 KiB | 00m00s [ 13/155] Installing filesystem-0:3.18- 100% | 3.8 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 16/155] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s [ 17/155] Installing ncurses-base-0:6.5 100% | 114.5 MiB/s | 351.7 KiB | 00m00s [ 18/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 19/155] Installing ncurses-libs-0:6.5 100% | 239.7 MiB/s | 981.8 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 20/155] Installing glibc-0:2.40.9000- 100% | 257.9 MiB/s | 6.7 MiB | 00m00s [ 21/155] Installing bash-0:5.2.32-2.fc 100% | 453.8 MiB/s | 8.2 MiB | 00m00s [ 22/155] Installing glibc-common-0:2.4 100% | 209.5 MiB/s | 1.0 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 23/155] Installing glibc-gconv-extra- 100% | 293.4 MiB/s | 8.2 MiB | 00m00s [ 24/155] Installing zlib-ng-compat-0:2 100% | 0.0 B/s | 138.8 KiB | 00m00s [ 25/155] Installing 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71.0 KiB | 00m00s [ 51/155] Installing audit-libs-0:4.0.2 100% | 325.6 MiB/s | 333.4 KiB | 00m00s [ 52/155] Installing pam-libs-0:1.6.1-6 100% | 138.0 MiB/s | 141.3 KiB | 00m00s [ 53/155] Installing libcap-0:2.70-4.fc 100% | 220.0 MiB/s | 225.2 KiB | 00m00s [ 54/155] Installing systemd-libs-0:256 100% | 406.7 MiB/s | 2.0 MiB | 00m00s [ 55/155] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 56/155] Installing libsepol-0:3.7-3.f 100% | 399.9 MiB/s | 819.0 KiB | 00m00s [ 57/155] Installing libselinux-0:3.7-6 100% | 178.0 MiB/s | 182.3 KiB | 00m00s [ 58/155] Installing sed-0:4.9-3.fc41.x 100% | 283.1 MiB/s | 869.7 KiB | 00m00s [ 59/155] Installing findutils-1:4.10.0 100% | 371.6 MiB/s | 1.9 MiB | 00m00s [ 60/155] Installing libmount-0:2.40.2- 100% | 348.6 MiB/s | 356.9 KiB | 00m00s [ 61/155] Installing lz4-libs-0:1.10.0- 100% | 0.0 B/s | 146.6 KiB | 00m00s [ 62/155] Installing lua-libs-0:5.4.6-6 100% | 279.5 MiB/s | 286.2 KiB | 00m00s [ 63/155] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 64/155] Installing alternatives-0:1.3 100% | 0.0 B/s | 67.9 KiB | 00m00s [ 65/155] Installing libffi-0:3.4.6-3.f 100% | 0.0 B/s | 87.8 KiB | 00m00s [ 66/155] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 67/155] Installing p11-kit-0:0.25.5-3 100% | 315.3 MiB/s | 2.2 MiB | 00m00s [ 68/155] Installing libunistring-0:1.1 100% | 432.7 MiB/s | 1.7 MiB | 00m00s [ 69/155] Installing libidn2-0:2.3.7-2. 100% | 163.6 MiB/s | 335.1 KiB | 00m00s [ 70/155] Installing libpsl-0:0.21.5-4. 100% | 0.0 B/s | 81.7 KiB | 00m00s [ 71/155] Installing p11-kit-trust-0:0. 100% | 76.8 MiB/s | 393.1 KiB | 00m00s [ 72/155] Installing zstd-0:1.5.6-2.fc4 100% | 422.9 MiB/s | 1.7 MiB | 00m00s [ 73/155] Installing util-linux-core-0: 100% | 305.6 MiB/s | 1.5 MiB | 00m00s [ 74/155] Installing tar-2:1.35-4.fc41. 100% | 422.6 MiB/s | 3.0 MiB | 00m00s [ 75/155] Installing libsemanage-0:3.7- 100% | 146.4 MiB/s | 299.8 KiB | 00m00s [ 76/155] Installing shadow-utils-2:4.1 100% | 276.3 MiB/s | 4.1 MiB | 00m00s [ 77/155] Installing zip-0:3.0-41.fc41. 100% | 345.2 MiB/s | 707.1 KiB | 00m00s [ 78/155] Installing gdbm-1:1.23-7.fc41 100% | 227.4 MiB/s | 465.8 KiB | 00m00s [ 79/155] Installing cyrus-sasl-lib-0:2 100% | 384.3 MiB/s | 2.3 MiB | 00m00s [ 80/155] Installing libfdisk-0:2.40.2- 100% | 355.5 MiB/s | 364.0 KiB | 00m00s [ 81/155] Installing libxml2-0:2.12.8-2 100% | 428.0 MiB/s | 1.7 MiB | 00m00s [ 82/155] Installing bzip2-0:1.0.8-19.f 100% | 97.8 MiB/s | 100.2 KiB | 00m00s [ 83/155] Installing add-determinism-0: 100% | 449.2 MiB/s | 2.2 MiB | 00m00s [ 84/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 85/155] Installing sqlite-libs-0:3.46 100% | 476.4 MiB/s | 1.4 MiB | 00m00s [ 86/155] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB | 00m00s [ 87/155] Installing patch-0:2.7.6-25.f 100% | 261.9 MiB/s | 268.2 KiB | 00m00s [ 88/155] Installing elfutils-default-y 100% | 681.0 KiB/s | 2.0 KiB | 00m00s [ 89/155] Installing elfutils-libs-0:0. 100% | 316.4 MiB/s | 648.0 KiB | 00m00s [ 90/155] Installing cpio-0:2.15-2.fc41 100% | 274.9 MiB/s | 1.1 MiB | 00m00s [ 91/155] Installing diffutils-0:3.10-8 100% | 318.1 MiB/s | 1.6 MiB | 00m00s [ 92/155] Installing libgomp-0:14.2.1-4 100% | 512.9 MiB/s | 525.2 KiB | 00m00s [ 93/155] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.8 KiB | 00m00s [ 94/155] Installing libverto-0:0.3.2-9 100% | 0.0 B/s | 31.3 KiB | 00m00s [ 95/155] Installing jansson-0:2.13.1-1 100% | 0.0 B/s | 89.7 KiB | 00m00s [ 96/155] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 79.3 KiB | 00m00s [ 97/155] Installing pkgconf-0:2.3.0-1. 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [ 98/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [ 99/155] Installing xxhash-libs-0:0.8. 100% | 0.0 B/s | 89.8 KiB | 00m00s [100/155] Installing libbrotli-0:1.1.0- 100% | 410.1 MiB/s | 839.9 KiB | 00m00s [101/155] Installing libnghttp2-0:1.63. 100% | 167.2 MiB/s | 171.2 KiB | 00m00s [102/155] Installing libtool-ltdl-0:2.4 100% | 0.0 B/s | 67.3 KiB | 00m00s [103/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [104/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [105/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [106/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [107/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [108/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [109/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [110/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [111/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [112/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [113/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [114/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [115/155] Installing coreutils-common-0 100% | 466.3 MiB/s | 11.2 MiB | 00m00s [116/155] Installing openssl-libs-1:3.2 100% | 489.3 MiB/s | 7.8 MiB | 00m00s [117/155] Installing coreutils-0:9.5-10 100% | 336.9 MiB/s | 5.7 MiB | 00m00s [118/155] Installing ca-certificates-0: 100% | 2.3 MiB/s | 2.4 MiB | 00m01s [119/155] Installing krb5-libs-0:1.21.3 100% | 328.5 MiB/s | 2.3 MiB | 00m00s [120/155] Installing libarchive-0:3.7.6 100% | 304.9 MiB/s | 936.7 KiB | 00m00s [121/155] Installing libtirpc-0:1.3.5-0 100% | 199.7 MiB/s | 204.5 KiB | 00m00s [122/155] Installing gzip-0:1.13-2.fc41 100% | 192.7 MiB/s | 394.6 KiB | 00m00s [123/155] Installing authselect-libs-0: 100% | 203.4 MiB/s | 833.2 KiB | 00m00s [124/155] Installing cracklib-0:2.9.11- 100% | 81.5 MiB/s | 250.3 KiB | 00m00s [125/155] Installing libpwquality-0:1.4 100% | 140.0 MiB/s | 430.1 KiB | 00m00s [126/155] Installing libnsl2-0:2.0.1-2. 100% | 57.7 MiB/s | 59.1 KiB | 00m00s [127/155] Installing pam-0:1.6.1-6.fc42 100% | 187.8 MiB/s | 1.9 MiB | 00m00s [128/155] Installing libssh-0:0.11.1-1. 100% | 279.2 MiB/s | 571.7 KiB | 00m00s [129/155] Installing rpm-sequoia-0:1.7. 100% | 394.5 MiB/s | 2.4 MiB | 00m00s [130/155] Installing rpm-libs-0:4.19.94 100% | 353.3 MiB/s | 723.6 KiB | 00m00s [131/155] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [132/155] Installing libevent-0:2.1.12- 100% | 292.8 MiB/s | 899.5 KiB | 00m00s [133/155] Installing openldap-0:2.6.8-5 100% | 316.4 MiB/s | 648.0 KiB | 00m00s [134/155] Installing libcurl-0:8.10.1-2 100% | 409.9 MiB/s | 839.5 KiB | 00m00s [135/155] Installing elfutils-debuginfo 100% | 65.3 MiB/s | 66.9 KiB | 00m00s [136/155] Installing elfutils-0:0.191-8 100% | 426.7 MiB/s | 2.6 MiB | 00m00s [137/155] Installing binutils-0:2.43.1- 100% | 437.1 MiB/s | 27.5 MiB | 00m00s [138/155] Installing gdb-minimal-0:15.1 100% | 448.1 MiB/s | 13.0 MiB | 00m00s [139/155] Installing debugedit-0:5.0-17 100% | 197.3 MiB/s | 202.0 KiB | 00m00s [140/155] Installing curl-0:8.10.1-2.fc 100% | 55.6 MiB/s | 455.8 KiB | 00m00s [141/155] Installing rpm-0:4.19.94-1.fc 100% | 208.8 MiB/s | 2.5 MiB | 00m00s [142/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [143/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [144/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 0.0 B/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 188.7 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.19.9 100% | 99.1 MiB/s | 202.9 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 218.5 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 154.2 MiB/s | 157.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1.1-1.fc4 100% | 262.1 KiB/s | 362.3 KiB | 00m01s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-7.fc41.x86_64 authselect-libs-1.5.0-7.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.x86_64 binutils-2.43.1-1.fc42.x86_64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.x86_64 coreutils-common-9.5-10.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20240927-1.git93b7251.fc42.noarch curl-8.10.1-2.fc42.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-17.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-7.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.x86_64 elfutils-debuginfod-client-0.191-8.fc41.x86_64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.x86_64 elfutils-libs-0.191-8.fc41.x86_64 fedora-gpg-keys-42-0.2.noarch fedora-release-42-0.3.noarch fedora-release-common-42-0.3.noarch fedora-release-identity-basic-42-0.3.noarch fedora-repos-42-0.2.noarch fedora-repos-rawhide-42-0.2.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-29.fc42.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.1-2.fc42.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-1.fc42.x86_64 glibc-common-2.40.9000-1.fc42.x86_64 glibc-gconv-extra-2.40.9000-1.fc42.x86_64 glibc-minimal-langpack-2.40.9000-1.fc42.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1.1-1.fc42.x86_64 jansson-2.13.1-10.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.6-1.fc42.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-8.fc42.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-3.fc41.x86_64 libcurl-8.10.1-2.fc42.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-8.fc42.x86_64 libffi-3.4.6-3.fc42.x86_64 libgcc-14.2.1-4.fc42.x86_64 libgomp-14.2.1-4.fc42.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-8.fc42.x86_64 libnghttp2-1.63.0-1.fc42.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc42.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-6.fc42.x86_64 libsemanage-3.7-3.fc42.x86_64 libsepol-3.7-3.fc42.x86_64 libsmartcols-2.40.2-8.fc42.x86_64 libssh-0.11.1-1.fc42.x86_64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.5-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libuuid-2.40.2-8.fc42.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-8.fc42.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.x86_64 pam-libs-1.6.1-6.fc42.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.x86_64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.x86_64 redhat-rpm-config-296-1.fc42.noarch rpm-4.19.94-1.fc42.x86_64 rpm-build-4.19.94-1.fc42.x86_64 rpm-build-libs-4.19.94-1.fc42.x86_64 rpm-libs-4.19.94-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-4.fc42.x86_64 sqlite-libs-3.46.0-4.fc41.x86_64 systemd-libs-256.5-1.fc42.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-8.fc42.x86_64 util-linux-core-2.40.2-8.fc42.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc42.x86_64 xz-5.6.3-1.fc42.x86_64 xz-libs-5.6.3-1.fc42.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc42.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728345600 Wrote: /builddir/build/SRPMS/bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1728371978.266791/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-a0kmoev7/bout++/bout++.spec) Config(child) 0 minutes 17 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728371978.266791/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728371978.266791/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1728371978.266791/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc42.x86_64 dnf5-plugins-5.2.6.2-1.fc42.x86_64 Finish: chroot init Start: build phase for bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Start: build setup for bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728345600 Wrote: /builddir/build/SRPMS/bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Updating and loading repositories: Copr repository 100% | 138.2 KiB/s | 1.5 KiB | 00m00s fedora 100% | 98.1 KiB/s | 25.6 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: chrpath x86_64 0.16-24.fc41 fedora 54.6 KiB cmake x86_64 3.28.3-7.fc41 fedora 31.6 MiB doxygen x86_64 2:1.12.0-1.fc41 fedora 19.2 MiB environment-modules x86_64 5.4.0-2.fc41 fedora 1.7 MiB fftw-devel x86_64 3.3.10-13.fc41 fedora 284.2 KiB flexiblas-devel x86_64 3.4.4-3.fc41 fedora 4.8 MiB fmt-devel x86_64 11.0.2-1.fc41 fedora 575.2 KiB gcc-c++ x86_64 14.2.1-4.fc42 fedora 38.2 MiB gettext-devel x86_64 0.22.5-6.fc41 fedora 1.0 MiB hdf5-devel x86_64 1.12.1-20.fc41 fedora 3.9 MiB hdf5-mpich-devel x86_64 1.12.1-20.fc41 fedora 3.6 MiB hdf5-openmpi-devel x86_64 1.12.1-20.fc41 fedora 3.6 MiB m4 x86_64 1.4.19-10.fc41 fedora 592.9 KiB make x86_64 1:4.4.1-9.fc42 fedora 1.8 MiB mpark-variant-devel x86_64 1.4.0-13.fc41 fedora 117.1 KiB mpich-devel x86_64 4.2.2-1.fc42 fedora 2.0 MiB netcdf-cxx4-devel x86_64 4.3.1-13.fc41 fedora 459.0 KiB netcdf-devel x86_64 4.9.2-6.fc41 fedora 368.7 KiB openmpi-devel x86_64 5.0.5-2.fc41 fedora 3.2 MiB petsc-mpich-devel x86_64 3.20.6-12.fc42 fedora 9.6 MiB petsc-openmpi-devel x86_64 3.20.6-12.fc42 fedora 10.2 MiB python3 x86_64 3.13.0~rc3-1.fc42 fedora 31.8 KiB python3-boutdata noarch 0.2.1-7.fc41 fedora 545.5 KiB python3-boututils noarch 0.2.1-6.fc41 fedora 435.6 KiB python3-cython x86_64 3.0.11-1.fc41 fedora 18.1 MiB python3-devel x86_64 3.13.0~rc3-1.fc42 fedora 1.8 MiB python3-jinja2 noarch 3.1.4-5.fc41 fedora 2.9 MiB python3-netcdf4 x86_64 1.7.1-2.fc41 fedora 2.3 MiB python3-numpy x86_64 1:1.26.4-8.fc41 fedora 43.8 MiB python3-scipy x86_64 1.11.3-15.fc41 fedora 62.5 MiB python3-sphinx noarch 1:7.3.7-2.fc41 fedora 10.8 MiB python3-tables x86_64 3.10.1-1.fc42 fedora 10.2 MiB python3-zoidberg noarch 0.1.1-7.fc41 fedora 515.6 KiB sundials-devel x86_64 6.7.0-4.fc41 fedora 11.1 MiB sundials-mpich-devel x86_64 6.7.0-4.fc41 fedora 12.1 MiB sundials-openmpi-devel x86_64 6.7.0-4.fc41 fedora 12.1 MiB zlib-ng-compat-devel x86_64 2.1.7-3.fc42 fedora 106.8 KiB Installing dependencies: MUMPS-common noarch 5.6.2-6.fc42 fedora 948.0 KiB MUMPS-mpich x86_64 5.6.2-6.fc42 fedora 9.7 MiB MUMPS-openmpi x86_64 5.6.2-6.fc42 fedora 9.7 MiB SuperLUMT-common noarch 4.0.1-3.fc41 fedora 679.2 KiB SuperLUMT64-double x86_64 4.0.1-3.fc41 fedora 161.2 KiB abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB adobe-mappings-cmap noarch 20230622-4.fc41 fedora 14.4 MiB adobe-mappings-cmap-deprecated noarch 20230622-4.fc41 fedora 582.1 KiB adobe-mappings-pdf noarch 20190401-8.fc41 fedora 4.4 MiB annobin-docs noarch 12.70-1.fc42 fedora 97.7 KiB annobin-plugin-gcc x86_64 12.70-1.fc42 fedora 985.6 KiB avahi-libs x86_64 0.8-30.fc42 fedora 174.2 KiB blosc x86_64 1.21.6-1.fc42 fedora 130.3 KiB blosc2 x86_64 2.15.1-1.fc42 fedora 552.3 KiB brotli x86_64 1.1.0-5.fc41 fedora 31.8 KiB brotli-devel x86_64 1.1.0-5.fc41 fedora 65.6 KiB cairo x86_64 1.18.0-4.fc41 fedora 1.7 MiB cairo-gobject x86_64 1.18.0-4.fc41 fedora 35.2 KiB cmake-data noarch 3.28.3-7.fc41 fedora 8.0 MiB cmake-filesystem x86_64 3.28.3-7.fc41 fedora 0.0 B cmake-rpm-macros noarch 3.28.3-7.fc41 fedora 7.5 KiB cpp x86_64 14.2.1-4.fc42 fedora 35.0 MiB cups-libs x86_64 1:2.4.10-7.fc42 fedora 622.9 KiB dbus x86_64 1:1.14.10-4.fc41 fedora 0.0 B dbus-broker x86_64 36-4.fc41 fedora 382.8 KiB dbus-common noarch 1:1.14.10-4.fc41 fedora 11.2 KiB dbus-libs x86_64 1:1.14.10-4.fc41 fedora 368.9 KiB default-fonts-core-sans noarch 4.1-3.fc42 fedora 11.9 KiB dejavu-sans-fonts noarch 2.37-24.fc41 fedora 5.5 MiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat x86_64 2.6.3-1.fc42 fedora 291.5 KiB fftw x86_64 3.3.10-13.fc41 fedora 182.6 KiB fftw-libs x86_64 3.3.10-13.fc41 fedora 0.0 B fftw-libs-double x86_64 3.3.10-13.fc41 fedora 3.4 MiB fftw-libs-long x86_64 3.3.10-13.fc41 fedora 1.5 MiB fftw-libs-quad x86_64 3.3.10-13.fc41 fedora 2.5 MiB fftw-libs-single x86_64 3.3.10-13.fc41 fedora 3.6 MiB flexiblas x86_64 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-netlib x86_64 3.4.4-3.fc41 fedora 10.7 MiB flexiblas-netlib64 x86_64 3.4.4-3.fc41 fedora 10.8 MiB flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 fedora 43.3 KiB flexiblas-openblas-openmp64 x86_64 3.4.4-3.fc41 fedora 43.3 KiB fmt x86_64 11.0.2-1.fc41 fedora 264.1 KiB fontconfig x86_64 2.15.0-8.fc41 fedora 791.9 KiB fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B freetype x86_64 2.13.2-6.fc41 fedora 850.6 KiB fribidi x86_64 1.0.16-1.fc42 fedora 194.5 KiB gcc x86_64 14.2.1-4.fc42 fedora 104.4 MiB gcc-gfortran x86_64 14.2.1-4.fc42 fedora 37.2 MiB gcc-plugin-annobin x86_64 14.2.1-4.fc42 fedora 61.1 KiB gd x86_64 2.3.3-17.fc41 fedora 403.7 KiB gdk-pixbuf2 x86_64 2.42.12-6.fc41 fedora 2.5 MiB gettext x86_64 0.22.5-6.fc41 fedora 5.2 MiB gettext-common-devel noarch 0.22.5-6.fc41 fedora 586.5 KiB gettext-envsubst x86_64 0.22.5-6.fc41 fedora 74.9 KiB gettext-libs x86_64 0.22.5-6.fc41 fedora 1.7 MiB gettext-runtime x86_64 0.22.5-6.fc41 fedora 481.3 KiB glib2 x86_64 2.82.1-2.fc42 fedora 14.7 MiB glibc-devel x86_64 2.40.9000-1.fc42 fedora 37.8 KiB glibc-headers-x86 noarch 2.40.9000-1.fc42 fedora 2.2 MiB gnupg2 x86_64 2.4.5-3.fc41 fedora 9.5 MiB gnutls x86_64 3.8.7-4.fc42 fedora 3.2 MiB google-droid-sans-fonts noarch 20200215-21.fc41 fedora 6.3 MiB google-noto-fonts-common noarch 20240901-1.fc42 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240901-1.fc42 fedora 1.2 MiB gpgme x86_64 1.23.2-5.fc41 fedora 579.3 KiB gpgmepp x86_64 1.23.2-5.fc41 fedora 424.2 KiB graphite2 x86_64 1.3.14-16.fc41 fedora 192.0 KiB graphviz x86_64 12.1.2-1.fc42 fedora 20.9 MiB graphviz-libs x86_64 12.1.2-1.fc42 fedora 1.2 MiB groff-base x86_64 1.23.0-7.fc41 fedora 3.8 MiB gts x86_64 0.7.6-49.20121130.fc41 fedora 650.2 KiB harfbuzz x86_64 10.0.1-1.fc42 fedora 2.7 MiB hdf-libs x86_64 4.3.0-1.fc42 fedora 699.3 KiB hdf5 x86_64 1.12.1-20.fc41 fedora 8.4 MiB hdf5-mpich x86_64 1.12.1-20.fc41 fedora 7.8 MiB hdf5-openmpi x86_64 1.12.1-20.fc41 fedora 7.8 MiB hwloc-libs x86_64 2.11.2-1.fc42 fedora 2.9 MiB hypre-mpich x86_64 2.24.0-16.fc42 fedora 4.5 MiB hypre-openmpi x86_64 2.24.0-16.fc42 fedora 4.5 MiB jbig2dec-libs x86_64 0.20-5.fc41 fedora 169.0 KiB jbigkit-libs x86_64 2.1-30.fc41 fedora 117.6 KiB json-c x86_64 0.17-4.fc41 fedora 82.4 KiB jsoncpp x86_64 1.9.5-8.fc41 fedora 253.4 KiB kernel-headers x86_64 6.11.0-63.fc42 fedora 6.4 MiB lasi x86_64 1.1.3-14.fc41 fedora 130.8 KiB lcms2 x86_64 2.16-4.fc41 fedora 424.9 KiB less x86_64 661-2.fc41 fedora 405.3 KiB libICE x86_64 1.1.1-4.fc41 fedora 181.2 KiB libSM x86_64 1.2.4-4.fc41 fedora 97.3 KiB libX11 x86_64 1.8.10-2.fc42 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc42 fedora 1.1 MiB libXau x86_64 1.0.11-7.fc41 fedora 66.9 KiB libXext x86_64 1.3.6-2.fc41 fedora 90.1 KiB libXft x86_64 2.3.8-7.fc41 fedora 164.5 KiB libXpm x86_64 3.5.17-4.fc41 fedora 148.4 KiB libXrender x86_64 0.9.11-7.fc41 fedora 50.1 KiB libXt x86_64 1.3.0-4.fc41 fedora 429.9 KiB libaec x86_64 1.1.3-1.fc42 fedora 98.1 KiB libaec-devel x86_64 1.1.3-1.fc42 fedora 12.5 KiB libaom x86_64 3.9.0-3.fc41 fedora 5.1 MiB libassuan x86_64 2.5.7-2.fc41 fedora 163.8 KiB libavif x86_64 1.0.4-7.fc41 fedora 183.8 KiB libb2 x86_64 0.98.1-12.fc41 fedora 42.2 KiB libcbor x86_64 0.11.0-2.fc41 fedora 73.9 KiB libcurl-devel x86_64 8.10.1-2.fc42 fedora 1.3 MiB libdatrie x86_64 0.2.13-10.fc41 fedora 57.9 KiB libdav1d x86_64 1.4.3-2.fc41 fedora 1.7 MiB libedit x86_64 3.1-53.20240808cvs.fc41 fedora 244.1 KiB libfabric x86_64 1.22.0-1.fc41 fedora 5.2 MiB libfido2 x86_64 1.15.0-2.fc41 fedora 238.2 KiB libgcrypt x86_64 1.11.0-3.fc41 fedora 1.5 MiB libgfortran x86_64 14.2.1-4.fc42 fedora 3.0 MiB libgpg-error x86_64 1.50-2.fc41 fedora 889.5 KiB libgs x86_64 10.03.1-3.fc41 fedora 23.2 MiB libibverbs x86_64 51.0-4.fc41 fedora 1.2 MiB libidn2-devel x86_64 2.3.7-2.fc41 fedora 252.1 KiB libijs x86_64 0.35-23.fc41 fedora 61.6 KiB libimagequant x86_64 4.0.3-5.fc41 fedora 666.7 KiB libjpeg-turbo x86_64 3.0.4-1.fc42 fedora 789.1 KiB libksba x86_64 1.6.7-2.fc41 fedora 398.4 KiB liblerc x86_64 4.0.0-7.fc41 fedora 607.5 KiB libmpc x86_64 1.3.1-6.fc41 fedora 164.7 KiB libnghttp2-devel x86_64 1.63.0-1.fc42 fedora 295.3 KiB libnl3 x86_64 3.10.0-1.fc41 fedora 1.0 MiB libpaper x86_64 1:2.1.1-7.fc41 fedora 48.9 KiB libpipeline x86_64 1.5.8-1.fc42 fedora 149.1 KiB libpng x86_64 2:1.6.44-1.fc42 fedora 245.8 KiB libpsl-devel x86_64 0.21.5-4.fc41 fedora 110.3 KiB libpsm2 x86_64 11.2.230-5.fc41 fedora 442.5 KiB libqhull_r x86_64 1:8.0.2-5.fc41 fedora 483.4 KiB libquadmath x86_64 14.2.1-4.fc42 fedora 325.9 KiB libquadmath-devel x86_64 14.2.1-4.fc42 fedora 21.9 KiB libraqm x86_64 0.10.1-1.fc42 fedora 32.7 KiB librdmacm x86_64 51.0-4.fc41 fedora 146.2 KiB librsvg2 x86_64 2.59.1-1.fc42 fedora 4.6 MiB libseccomp x86_64 2.5.5-2.fc41 fedora 173.3 KiB libssh-devel x86_64 0.11.1-1.fc42 fedora 177.8 KiB libstdc++-devel x86_64 14.2.1-4.fc42 fedora 15.4 MiB libtextstyle x86_64 0.22.5-6.fc41 fedora 195.6 KiB libthai x86_64 0.1.29-9.fc41 fedora 783.5 KiB libtiff x86_64 4.6.0-6.fc42 fedora 606.0 KiB libuv x86_64 1:1.49.0-1.fc42 fedora 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perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB perl-MIME-Base64 x86_64 3.16-511.fc41 fedora 46.1 KiB perl-Mozilla-CA noarch 20240924-1.fc42 fedora 10.3 KiB perl-Net-SSLeay x86_64 1.94-7.fc41 fedora 1.3 MiB perl-POSIX x86_64 2.20-511.fc41 fedora 235.1 KiB perl-PathTools x86_64 3.91-511.fc41 fedora 180.0 KiB perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB perl-Scalar-List-Utils x86_64 5:1.66-1.fc42 fedora 146.6 KiB perl-SelectSaver noarch 1.02-511.fc41 fedora 2.2 KiB perl-Socket x86_64 4:2.038-511.fc41 fedora 124.0 KiB perl-Storable x86_64 1:3.32-511.fc41 fedora 232.4 KiB perl-Symbol noarch 1.09-511.fc41 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 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24.08.0-1.fc42 fedora 3.6 MiB poppler-data noarch 0.4.11-8.fc41 fedora 12.3 MiB poppler-glib x86_64 24.08.0-1.fc42 fedora 586.9 KiB procps-ng x86_64 4.0.4-4.fc41 fedora 1.0 MiB prrte x86_64 3.0.2-6.fc41 fedora 240.2 KiB prrte-libs x86_64 3.0.2-6.fc41 fedora 1.5 MiB ptscotch-mpich x86_64 7.0.5-1.fc42 fedora 1.1 MiB ptscotch-mpich-devel x86_64 7.0.5-1.fc42 fedora 98.2 KiB ptscotch-mpich-devel-parmetis x86_64 7.0.5-1.fc42 fedora 37.6 KiB ptscotch-openmpi x86_64 7.0.5-1.fc42 fedora 1.1 MiB publicsuffix-list noarch 20240107-4.fc41 fedora 318.0 KiB pyproject-rpm-macros noarch 1.15.1-1.fc42 fedora 109.2 KiB python-pip-wheel noarch 24.2-2.fc42 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3-appdirs noarch 1.4.4-24.fc42 fedora 68.7 KiB python3-babel noarch 2.16.0-1.fc42 fedora 28.3 MiB python3-blosc2 x86_64 2.5.1-5.fc42 fedora 1.0 MiB python3-brotli x86_64 1.1.0-5.fc41 fedora 836.0 KiB python3-cairo x86_64 1.25.1-5.fc41 fedora 492.5 KiB python3-certifi noarch 2024.08.30-1.fc42 fedora 6.8 KiB python3-cftime x86_64 1.6.4-1.fc41 fedora 632.4 KiB python3-charset-normalizer noarch 3.3.2-5.fc41 fedora 314.8 KiB python3-contourpy x86_64 1.3.0-1.fc42 fedora 808.6 KiB python3-cpuinfo noarch 9.0.0-9.fc41 fedora 309.7 KiB python3-cycler noarch 0.11.0-13.fc41 fedora 37.6 KiB python3-dateutil noarch 1:2.8.2-16.fc41 fedora 879.2 KiB python3-docutils noarch 0.21.2-1.fc42 fedora 4.9 MiB python3-fonttools x86_64 4.54.1-1.fc42 fedora 18.3 MiB python3-fs noarch 2.4.16-9.fc41 fedora 1.3 MiB python3-idna noarch 3.9-1.fc42 fedora 639.8 KiB python3-imagesize noarch 1.4.1-9.fc41 fedora 35.3 KiB python3-kiwisolver x86_64 1.4.7-1.fc42 fedora 153.9 KiB python3-libs x86_64 3.13.0~rc3-1.fc42 fedora 40.4 MiB python3-lxml x86_64 5.3.0-1.fc42 fedora 4.9 MiB python3-markupsafe x86_64 2.1.5-3.fc41 fedora 57.5 KiB python3-matplotlib x86_64 3.9.1-2.fc41 fedora 21.1 MiB python3-matplotlib-data noarch 3.9.1-2.fc41 fedora 741.5 KiB python3-matplotlib-data-fonts noarch 3.9.1-2.fc41 fedora 7.9 MiB python3-matplotlib-tk x86_64 3.9.1-2.fc41 fedora 262.7 KiB python3-mpmath noarch 1.3.0-10.fc41 fedora 5.2 MiB python3-msgpack x86_64 1.1.0-1.fc42 fedora 330.0 KiB python3-natsort noarch 8.4.0-2.fc41 fedora 252.8 KiB python3-ndindex x86_64 1.7-13.fc41 fedora 2.9 MiB python3-numexpr x86_64 2.8.5-7.fc41 fedora 574.8 KiB python3-numpy-f2py x86_64 1:1.26.4-8.fc41 fedora 2.8 MiB python3-olefile noarch 0.47-5.fc41 fedora 340.4 KiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB python3-pillow x86_64 10.4.0-2.fc41 fedora 3.7 MiB python3-pillow-tk x86_64 10.4.0-2.fc41 fedora 68.4 KiB python3-platformdirs noarch 4.2.2-2.fc41 fedora 168.6 KiB python3-pooch noarch 1.8.2-3.fc41 fedora 625.5 KiB python3-pygments noarch 2.18.0-2.fc42 fedora 10.6 MiB python3-pyparsing noarch 3.1.2-7.fc41 fedora 1.0 MiB python3-requests noarch 2.32.3-3.fc41 fedora 485.9 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB python3-setuptools noarch 69.2.0-8.fc41 fedora 7.2 MiB python3-six noarch 1.16.0-23.fc41 fedora 118.3 KiB python3-snowballstemmer noarch 2.2.0-13.fc41 fedora 1.7 MiB python3-sphinx-theme-alabaster noarch 0.7.16-6.fc41 fedora 41.9 KiB python3-sympy x86_64 1.13.3-1.fc42 fedora 78.3 MiB python3-tkinter x86_64 3.13.0~rc3-1.fc42 fedora 2.0 MiB python3-typing-extensions noarch 4.12.2-3.fc41 fedora 464.5 KiB python3-urllib3 noarch 2.2.3-3.fc42 fedora 1.0 MiB rav1e-libs x86_64 0.7.1-4.fc42 fedora 3.0 MiB rhash x86_64 1.4.4-2.fc41 fedora 349.9 KiB rpm-mpi-hooks noarch 8-10.fc41 fedora 8.7 KiB rsvg-pixbuf-loader x86_64 2.59.1-1.fc42 fedora 339.9 KiB scalapack-common x86_64 2.2.0-10.fc41 fedora 26.8 KiB scalapack-mpich x86_64 2.2.0-10.fc41 fedora 5.5 MiB scalapack-openmpi x86_64 2.2.0-10.fc41 fedora 5.5 MiB shared-mime-info x86_64 2.3-6.fc41 fedora 5.2 MiB snappy x86_64 1.2.1-3.fc42 fedora 71.1 KiB suitesparse x86_64 7.7.0-2.fc41 fedora 139.9 MiB suitesparse64 x86_64 7.7.0-2.fc41 fedora 139.9 MiB sundials x86_64 6.7.0-4.fc41 fedora 6.8 MiB sundials-mpich x86_64 6.7.0-4.fc41 fedora 7.5 MiB sundials-openmpi x86_64 6.7.0-4.fc41 fedora 7.5 MiB superlu_dist-mpich x86_64 1:8.2.0-5.fc42 fedora 1.4 MiB superlu_dist-mpich-devel x86_64 1:8.2.0-5.fc42 fedora 461.4 KiB superlu_dist-openmpi x86_64 1:8.2.0-5.fc42 fedora 1.4 MiB superlu_dist-openmpi-devel x86_64 1:8.2.0-5.fc42 fedora 461.9 KiB svt-av1-libs x86_64 2.1.0-2.fc41 fedora 7.1 MiB systemd x86_64 256.5-1.fc42 fedora 17.0 MiB systemd-pam x86_64 256.5-1.fc42 fedora 1.1 MiB systemd-rpm-macros noarch 256.5-1.fc42 fedora 9.3 KiB tcl x86_64 1:8.6.14-2.fc41 fedora 4.2 MiB tcsh x86_64 6.24.13-1.fc41 fedora 1.2 MiB tk x86_64 1:8.6.14-2.fc41 fedora 3.6 MiB torque-libs x86_64 6.1.3-13.fc42 fedora 458.3 KiB tpm2-tss x86_64 4.1.3-3.fc41 fedora 1.6 MiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB ucx x86_64 1.17.0-2.fc41 fedora 2.4 MiB urw-base35-bookman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-c059-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 20200910-23.fc41 fedora 84.3 KiB urw-base35-fonts noarch 20200910-23.fc41 fedora 5.3 KiB urw-base35-fonts-common noarch 20200910-23.fc41 fedora 37.4 KiB urw-base35-gothic-fonts noarch 20200910-23.fc41 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 20200910-23.fc41 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-23.fc41 fedora 2.4 MiB urw-base35-p052-fonts noarch 20200910-23.fc41 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41 fedora 64.9 KiB urw-base35-z003-fonts noarch 20200910-23.fc41 fedora 390.8 KiB vim-filesystem noarch 2:9.1.737-1.fc42 fedora 40.0 B xapian-core-libs x86_64 1.4.26-1.fc42 fedora 2.1 MiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB yaksa x86_64 0.3-6.fc41 fedora 44.9 MiB zlib-ng x86_64 2.1.7-3.fc42 fedora 153.4 KiB Transaction Summary: Installing: 389 packages Total size of inbound packages is 430 MiB. Need to download 430 MiB. After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B). 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urw-base35-nimbus-roman-fonts 100% | 83.6 MiB/s | 856.0 KiB | 00m00s [347/389] urw-base35-nimbus-sans-fonts- 100% | 93.2 MiB/s | 1.3 MiB | 00m00s [348/389] urw-base35-p052-fonts-0:20200 100% | 86.4 MiB/s | 973.1 KiB | 00m00s [349/389] urw-base35-standard-symbols-p 100% | 6.3 MiB/s | 58.2 KiB | 00m00s [350/389] urw-base35-z003-fonts-0:20200 100% | 67.2 MiB/s | 275.4 KiB | 00m00s [351/389] libdav1d-0:1.4.3-2.fc41.x86_6 100% | 122.2 MiB/s | 625.6 KiB | 00m00s [352/389] libaom-0:3.9.0-3.fc41.x86_64 100% | 261.9 MiB/s | 1.8 MiB | 00m00s [353/389] rav1e-libs-0:0.7.1-4.fc42.x86 100% | 127.7 MiB/s | 1.0 MiB | 00m00s [354/389] avahi-libs-0:0.8-30.fc42.x86_ 100% | 16.3 MiB/s | 66.6 KiB | 00m00s [355/389] svt-av1-libs-0:2.1.0-2.fc41.x 100% | 203.2 MiB/s | 2.0 MiB | 00m00s [356/389] libICE-0:1.1.1-4.fc41.x86_64 100% | 24.3 MiB/s | 74.7 KiB | 00m00s [357/389] libSM-0:1.2.4-4.fc41.x86_64 100% | 14.1 MiB/s | 43.2 KiB | 00m00s [358/389] libdatrie-0:0.2.13-10.fc41.x8 100% | 15.7 MiB/s | 32.2 KiB | 00m00s [359/389] gpgmepp-0:1.23.2-5.fc41.x86_6 100% | 45.0 MiB/s | 138.1 KiB | 00m00s [360/389] nspr-0:4.35.0-29.fc42.x86_64 100% | 33.6 MiB/s | 137.6 KiB | 00m00s [361/389] nss-0:3.104.0-1.fc42.x86_64 100% | 98.2 MiB/s | 704.1 KiB | 00m00s [362/389] libvmaf-0:3.0.0-2.fc41.x86_64 100% | 31.5 MiB/s | 193.7 KiB | 00m00s [363/389] poppler-data-0:0.4.11-8.fc41. 100% | 151.9 MiB/s | 2.0 MiB | 00m00s [364/389] dbus-libs-1:1.14.10-4.fc41.x8 100% | 18.9 MiB/s | 155.1 KiB | 00m00s [365/389] gpgme-0:1.23.2-5.fc41.x86_64 100% | 25.9 MiB/s | 212.4 KiB | 00m00s [366/389] libassuan-0:2.5.7-2.fc41.x86_ 100% | 16.4 MiB/s | 67.1 KiB | 00m00s [367/389] nss-sysinit-0:3.104.0-1.fc42. 100% | 6.3 MiB/s | 19.3 KiB | 00m00s [368/389] nss-softokn-0:3.104.0-1.fc42. 100% | 57.5 MiB/s | 412.3 KiB | 00m00s [369/389] nss-util-0:3.104.0-1.fc42.x86 100% | 16.8 MiB/s | 86.1 KiB | 00m00s [370/389] libgpg-error-0:1.50-2.fc41.x8 100% | 77.3 MiB/s | 237.5 KiB | 00m00s [371/389] nss-softokn-freebl-0:3.104.0- 100% | 59.0 MiB/s | 301.9 KiB | 00m00s [372/389] libgcrypt-0:1.11.0-3.fc41.x86 100% | 113.0 MiB/s | 578.5 KiB | 00m00s [373/389] npth-0:1.7-2.fc41.x86_64 100% | 12.3 MiB/s | 25.2 KiB | 00m00s [374/389] libksba-0:1.6.7-2.fc41.x86_64 100% | 52.0 MiB/s | 159.7 KiB | 00m00s [375/389] tpm2-tss-0:4.1.3-3.fc41.x86_6 100% | 80.4 MiB/s | 411.5 KiB | 00m00s [376/389] gnupg2-0:2.4.5-3.fc41.x86_64 100% | 121.9 MiB/s | 2.7 MiB | 00m00s [377/389] rsvg-pixbuf-loader-0:2.59.1-1 100% | 40.4 MiB/s | 165.5 KiB | 00m00s [378/389] kernel-headers-0:6.11.0-63.fc 100% | 270.8 MiB/s | 1.6 MiB | 00m00s [379/389] json-c-0:0.17-4.fc41.x86_64 100% | 3.1 MiB/s | 44.0 KiB | 00m00s [380/389] hdf-libs-0:4.3.0-1.fc42.x86_6 100% | 56.7 MiB/s | 290.3 KiB | 00m00s [381/389] gcc-plugin-annobin-0:14.2.1-4 100% | 53.9 MiB/s | 55.2 KiB | 00m00s [382/389] annobin-plugin-gcc-0:12.70-1. 100% | 237.2 MiB/s | 971.7 KiB | 00m00s [383/389] annobin-docs-0:12.70-1.fc42.n 100% | 22.5 MiB/s | 92.0 KiB | 00m00s [384/389] systemd-rpm-macros-0:256.5-1. 100% | 11.1 MiB/s | 34.2 KiB | 00m00s [385/389] pyproject-rpm-macros-0:1.15.1 100% | 42.3 MiB/s | 43.3 KiB | 00m00s [386/389] python-rpm-macros-0:3.13-3.fc 100% | 17.3 MiB/s | 17.7 KiB | 00m00s [387/389] python3-rpm-generators-0:14-1 100% | 14.3 MiB/s | 29.3 KiB | 00m00s [388/389] python3-rpm-macros-0:3.13-3.f 100% | 12.2 MiB/s | 12.4 KiB | 00m00s [389/389] cmake-rpm-macros-0:3.28.3-7.f 100% | 8.7 MiB/s | 17.7 KiB | 00m00s -------------------------------------------------------------------------------- [389/389] Total 100% | 239.7 MiB/s | 429.8 MiB | 00m02s Running transaction [ 1/391] Verify package files 100% | 335.0 B/s | 389.0 B | 00m01s [ 2/391] Prepare transaction 100% | 2.1 KiB/s | 389.0 B | 00m00s [ 3/391] Installing libgfortran-0:14.2 100% | 381.1 MiB/s | 3.0 MiB | 00m00s [ 4/391] Installing libquadmath-0:14.2 100% | 319.5 MiB/s | 327.2 KiB | 00m00s [ 5/391] Installing cmake-filesystem-0 100% | 7.0 MiB/s | 7.1 KiB | 00m00s [ 6/391] Installing libjpeg-turbo-0:3. 100% | 386.1 MiB/s | 790.8 KiB | 00m00s [ 7/391] Installing nspr-0:4.35.0-29.f 100% | 314.5 MiB/s | 322.1 KiB | 00m00s [ 8/391] Installing libpng-2:1.6.44-1. 100% | 241.2 MiB/s | 247.0 KiB | 00m00s [ 9/391] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 10/391] Installing urw-base35-fonts-c 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 11/391] Installing metis-0:5.1.0.3-6. 100% | 322.2 MiB/s | 989.8 KiB | 00m00s [ 12/391] Installing hwloc-libs-0:2.11. 100% | 573.3 MiB/s | 2.9 MiB | 00m00s [ 13/391] Installing libaec-0:1.1.3-1.f 100% | 98.1 MiB/s | 100.5 KiB | 00m00s [ 14/391] Installing libgpg-error-0:1.5 100% | 291.5 MiB/s | 895.4 KiB | 00m00s [ 15/391] Installing libwebp-0:1.4.0-4. 100% | 269.1 MiB/s | 826.8 KiB | 00m00s [ 16/391] Installing expat-0:2.6.3-1.fc 100% | 286.7 MiB/s | 293.6 KiB | 00m00s [ 17/391] Installing nss-util-0:3.104.0 100% | 201.1 MiB/s | 206.0 KiB | 00m00s [ 18/391] Installing zlib-ng-compat-dev 100% | 0.0 B/s | 108.3 KiB | 00m00s [ 19/391] Installing libmpc-0:1.3.1-6.f 100% | 162.3 MiB/s | 166.2 KiB | 00m00s [ 20/391] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB | 00m00s [ 21/391] Installing libaec-devel-0:1.1 100% | 0.0 B/s | 13.5 KiB | 00m00s [ 22/391] Installing hdf5-0:1.12.1-20.f 100% | 399.6 MiB/s | 8.4 MiB | 00m00s [ 23/391] Installing python-rpm-macros- 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 24/391] Installing openblas-0:0.3.26- 100% | 95.5 MiB/s | 97.8 KiB | 00m00s [ 25/391] Installing tcl-1:8.6.14-2.fc4 100% | 384.2 MiB/s | 4.2 MiB | 00m00s [ 26/391] Installing openjpeg-0:2.5.2-4 100% | 218.6 MiB/s | 447.6 KiB | 00m00s [ 27/391] Installing lcms2-0:2.16-4.fc4 100% | 416.5 MiB/s | 426.5 KiB | 00m00s [ 28/391] Installing libnl3-0:3.10.0-1. 100% | 341.3 MiB/s | 1.0 MiB | 00m00s [ 29/391] Installing libibverbs-0:51.0- 100% | 303.3 MiB/s | 1.2 MiB | 00m00s [ 30/391] Installing munge-libs-0:0.5.1 100% | 0.0 B/s | 32.9 KiB | 00m00s [ 31/391] Installing pmix-0:4.2.8-3.fc4 100% | 403.2 MiB/s | 2.0 MiB | 00m00s [ 32/391] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 33/391] Installing scalapack-common-0 100% | 0.0 B/s | 28.3 KiB | 00m00s [ 34/391] Installing fftw-libs-quad-0:3 100% | 422.2 MiB/s | 2.5 MiB | 00m00s [ 35/391] Installing python3-matplotlib 100% | 465.4 MiB/s | 7.9 MiB | 00m00s [ 36/391] Installing python3-matplotlib 100% | 247.0 MiB/s | 758.7 KiB | 00m00s [ 37/391] Installing libICE-0:1.1.1-4.f 100% | 178.3 MiB/s | 182.6 KiB | 00m00s [ 38/391] Installing adobe-mappings-cma 100% | 465.0 MiB/s | 14.4 MiB | 00m00s [ 39/391] Installing fribidi-0:1.0.16-1 100% | 192.4 MiB/s | 197.0 KiB | 00m00s [ 40/391] Installing libimagequant-0:4. 100% | 326.3 MiB/s | 668.3 KiB | 00m00s [ 41/391] Installing MUMPS-common-0:5.6 100% | 926.7 MiB/s | 949.0 KiB | 00m00s [ 42/391] Installing numactl-libs-0:2.0 100% | 0.0 B/s | 61.9 KiB | 00m00s [ 43/391] Installing libpsm2-0:11.2.230 100% | 108.3 MiB/s | 443.6 KiB | 00m00s [ 44/391] Installing tzdata-0:2024a-9.f 100% | 77.6 MiB/s | 1.9 MiB | 00m00s [ 45/391] Installing libtextstyle-0:0.2 100% | 191.9 MiB/s | 196.5 KiB | 00m00s [ 46/391] Installing gettext-libs-0:0.2 100% | 335.3 MiB/s | 1.7 MiB | 00m00s [ 47/391] Installing fftw-libs-single-0 100% | 402.6 MiB/s | 3.6 MiB | 00m00s [ 48/391] Installing fftw-libs-long-0:3 100% | 388.1 MiB/s | 1.6 MiB | 00m00s [ 49/391] Installing fftw-libs-double-0 100% | 245.2 MiB/s | 3.4 MiB | 00m00s [ 50/391] Installing groff-base-0:1.23. 100% | 227.8 MiB/s | 3.9 MiB | 00m00s [ 51/391] Installing jsoncpp-0:1.9.5-8. 100% | 249.0 MiB/s | 254.9 KiB | 00m00s [ 52/391] Installing vim-filesystem-2:9 100% | 0.0 B/s | 4.7 KiB | 00m00s [ 53/391] Installing less-0:661-2.fc41. 100% | 199.5 MiB/s | 408.6 KiB | 00m00s [ 54/391] Installing make-1:4.4.1-9.fc4 100% | 360.0 MiB/s | 1.8 MiB | 00m00s [ 55/391] Installing fftw-0:3.3.10-13.f 100% | 181.2 MiB/s | 185.5 KiB | 00m00s [ 56/391] Installing fftw-libs-0:3.3.10 100% | 0.0 B/s | 124.0 B | 00m00s [ 57/391] Installing adobe-mappings-cma 100% | 285.7 MiB/s | 585.2 KiB | 00m00s [ 58/391] Installing libSM-0:1.2.4-4.fc 100% | 96.3 MiB/s | 98.7 KiB | 00m00s [ 59/391] Installing pyproject-rpm-macr 100% | 108.6 MiB/s | 111.2 KiB | 00m00s [ 60/391] Installing librdmacm-0:51.0-4 100% | 144.6 MiB/s | 148.1 KiB | 00m00s [ 61/391] Installing libfabric-0:1.22.0 100% | 469.5 MiB/s | 5.2 MiB | 00m00s [ 62/391] Installing openblas-openmp-0: 100% | 690.7 MiB/s | 39.4 MiB | 00m00s [ 63/391] Installing flexiblas-0:3.4.4- 100% | 0.0 B/s | 49.7 KiB | 00m00s [ 64/391] Installing flexiblas-openblas 100% | 0.0 B/s | 44.1 KiB | 00m00s [ 65/391] Installing flexiblas-netlib-0 100% | 463.7 MiB/s | 10.7 MiB | 00m00s [ 66/391] Installing suitesparse-0:7.7. 100% | 645.0 MiB/s | 140.0 MiB | 00m00s [ 67/391] Installing openblas-serial-0: 100% | 676.8 MiB/s | 37.9 MiB | 00m00s [ 68/391] Installing suitesparse64-0:7. 100% | 645.0 MiB/s | 140.0 MiB | 00m00s [ 69/391] Installing openblas-openmp64- 100% | 693.5 MiB/s | 39.5 MiB | 00m00s [ 70/391] Installing flexiblas-netlib64 100% | 489.7 MiB/s | 10.8 MiB | 00m00s [ 71/391] Installing flexiblas-openblas 100% | 0.0 B/s | 44.2 KiB | 00m00s [ 72/391] Installing cpp-0:14.2.1-4.fc4 100% | 448.8 MiB/s | 35.0 MiB | 00m00s [ 73/391] Installing nss-softokn-freebl 100% | 383.7 MiB/s | 785.8 KiB | 00m00s [ 74/391] Installing nss-softokn-0:3.10 100% | 471.8 MiB/s | 1.9 MiB | 00m00s [ 75/391] Installing nss-sysinit-0:3.10 100% | 22.7 MiB/s | 23.3 KiB | 00m00s [ 76/391] Installing nss-0:3.104.0-1.fc 100% | 209.1 MiB/s | 1.9 MiB | 00m00s [ 77/391] Installing graphviz-libs-0:12 100% | 306.8 MiB/s | 1.2 MiB | 00m00s [ 78/391] Installing libgcrypt-0:1.11.0 100% | 385.5 MiB/s | 1.5 MiB | 00m00s [ 79/391] Installing libksba-0:1.6.7-2. 100% | 391.6 MiB/s | 401.0 KiB | 00m00s [ 80/391] Installing hdf-libs-0:4.3.0-1 100% | 342.0 MiB/s | 700.5 KiB | 00m00s [ 81/391] Installing urw-base35-bookman 100% | 151.7 MiB/s | 1.4 MiB | 00m00s [ 82/391] Installing urw-base35-c059-fo 100% | 232.5 MiB/s | 1.4 MiB | 00m00s [ 83/391] Installing urw-base35-d050000 100% | 20.8 MiB/s | 85.4 KiB | 00m00s [ 84/391] Installing urw-base35-gothic- 100% | 193.8 MiB/s | 1.2 MiB | 00m00s [ 85/391] Installing urw-base35-nimbus- 100% | 175.3 MiB/s | 1.1 MiB | 00m00s [ 86/391] Installing urw-base35-nimbus- 100% | 195.1 MiB/s | 1.4 MiB | 00m00s [ 87/391] Installing urw-base35-nimbus- 100% | 266.0 MiB/s | 2.4 MiB | 00m00s [ 88/391] Installing urw-base35-p052-fo 100% | 212.5 MiB/s | 1.5 MiB | 00m00s [ 89/391] Installing urw-base35-standar 100% | 16.1 MiB/s | 66.0 KiB | 00m00s [ 90/391] Installing urw-base35-z003-fo 100% | 95.7 MiB/s | 391.8 KiB | 00m00s [ 91/391] Installing urw-base35-fonts-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 92/391] Installing dejavu-sans-fonts- 100% | 459.1 MiB/s | 5.5 MiB | 00m00s [ 93/391] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [ 94/391] Installing google-droid-sans- 100% | 417.3 MiB/s | 6.3 MiB | 00m00s [ 95/391] Installing libssh-devel-0:0.1 100% | 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| 5.2 MiB | 00m00s [300/391] Installing python3-sympy-0:1. 100% | 379.0 MiB/s | 79.2 MiB | 00m00s [301/391] Installing python3-platformdi 100% | 170.9 MiB/s | 175.0 KiB | 00m00s [302/391] Installing python3-charset-no 100% | 158.5 MiB/s | 324.7 KiB | 00m00s [303/391] Installing python3-requests-0 100% | 243.2 MiB/s | 498.0 KiB | 00m00s [304/391] Installing python3-pooch-0:1. 100% | 89.4 MiB/s | 640.5 KiB | 00m00s [305/391] Installing python3-scipy-0:1. 100% | 446.0 MiB/s | 62.9 MiB | 00m00s [306/391] Installing python3-msgpack-0: 100% | 327.1 MiB/s | 334.9 KiB | 00m00s [307/391] Installing python3-brotli-0:1 100% | 272.9 MiB/s | 838.5 KiB | 00m00s [308/391] Installing python3-lxml-0:5.3 100% | 382.0 MiB/s | 5.0 MiB | 00m00s [309/391] Installing python3-appdirs-0: 100% | 34.6 MiB/s | 70.9 KiB | 00m00s [310/391] Installing python3-setuptools 100% | 318.7 MiB/s | 7.3 MiB | 00m00s [311/391] Installing python3-fs-0:2.4.1 100% | 223.6 MiB/s | 1.3 MiB | 00m00s [312/391] Installing python3-fonttools- 100% | 429.7 MiB/s | 18.5 MiB | 00m00s [313/391] Installing python3-olefile-0: 100% | 167.8 MiB/s | 343.6 KiB | 00m00s [314/391] Installing python3-pillow-0:1 100% | 339.8 MiB/s | 3.7 MiB | 00m00s [315/391] Installing python3-pillow-tk- 100% | 0.0 B/s | 70.1 KiB | 00m00s [316/391] Installing python3-cairo-0:1. 100% | 242.5 MiB/s | 496.6 KiB | 00m00s [317/391] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [318/391] Installing zlib-ng-0:2.1.7-3. 100% | 151.2 MiB/s | 154.8 KiB | 00m00s [319/391] Installing blosc2-0:2.15.1-1. 100% | 271.3 MiB/s | 555.6 KiB | 00m00s [320/391] Installing python3-blosc2-0:2 100% | 332.4 MiB/s | 1.0 MiB | 00m00s [321/391] Installing snappy-0:1.2.1-3.f 100% | 71.1 MiB/s | 72.8 KiB | 00m00s [322/391] Installing blosc-0:1.21.6-1.f 100% | 130.0 MiB/s | 133.1 KiB | 00m00s [323/391] Installing netcdf-0:4.9.2-6.f 100% | 343.9 MiB/s | 2.4 MiB | 00m00s [324/391] Installing python3-netcdf4-0: 100% | 391.1 MiB/s | 2.3 MiB | 00m00s 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MiB/s | 1.1 MiB | 00m00s [338/391] Installing ptscotch-mpich-dev 100% | 101.7 MiB/s | 104.1 KiB | 00m00s [339/391] Installing hdf5-mpich-0:1.12. 100% | 431.5 MiB/s | 7.8 MiB | 00m00s [340/391] Installing scalapack-mpich-0: 100% | 456.7 MiB/s | 5.5 MiB | 00m00s [341/391] Installing hdf5-openmpi-0:1.1 100% | 457.2 MiB/s | 7.8 MiB | 00m00s [342/391] Installing scalapack-openmpi- 100% | 457.0 MiB/s | 5.5 MiB | 00m00s [343/391] Installing rpm-mpi-hooks-0:8- 100% | 4.7 MiB/s | 9.7 KiB | 00m00s [344/391] Installing openmpi-devel-0:5. 100% | 209.0 MiB/s | 3.3 MiB | 00m00s [345/391] Installing mpich-devel-0:4.2. 100% | 143.3 MiB/s | 2.1 MiB | 00m00s [346/391] Installing hdf5-mpich-devel-0 100% | 402.3 MiB/s | 3.6 MiB | 00m00s [347/391] Installing hdf5-openmpi-devel 100% | 452.6 MiB/s | 3.6 MiB | 00m00s [348/391] Installing superlu_dist-openm 100% | 354.3 MiB/s | 1.4 MiB | 00m00s [349/391] Installing superlu_dist-openm 100% | 229.4 MiB/s | 469.8 KiB | 00m00s [350/391] Installing hypre-openmpi-0:2. 100% | 412.9 MiB/s | 4.5 MiB | 00m00s [351/391] Installing sundials-openmpi-0 100% | 469.7 MiB/s | 7.5 MiB | 00m00s [352/391] Installing MUMPS-openmpi-0:5. 100% | 537.3 MiB/s | 9.7 MiB | 00m00s [353/391] Installing petsc-openmpi-0:3. 100% | 438.7 MiB/s | 21.5 MiB | 00m00s [354/391] Installing MUMPS-mpich-0:5.6. 100% | 537.3 MiB/s | 9.7 MiB | 00m00s [355/391] Installing ptscotch-mpich-dev 100% | 0.0 B/s | 39.5 KiB | 00m00s [356/391] Installing superlu_dist-mpich 100% | 353.3 MiB/s | 1.4 MiB | 00m00s [357/391] Installing superlu_dist-mpich 100% | 229.2 MiB/s | 469.3 KiB | 00m00s [358/391] Installing hypre-mpich-0:2.24 100% | 412.6 MiB/s | 4.5 MiB | 00m00s [359/391] Installing petsc-mpich-0:3.20 100% | 444.0 MiB/s | 21.3 MiB | 00m00s [360/391] Installing sundials-mpich-0:6 100% | 469.6 MiB/s | 7.5 MiB | 00m00s [361/391] Installing netcdf-cxx4-0:4.3. 100% | 310.7 MiB/s | 318.2 KiB | 00m00s [362/391] Installing gettext-common-dev 100% | 573.0 MiB/s | 586.8 KiB | 00m00s [363/391] Installing fmt-0:11.0.2-1.fc4 100% | 259.4 MiB/s | 265.6 KiB | 00m00s [364/391] Installing rhash-0:1.4.4-2.fc 100% | 173.4 MiB/s | 355.1 KiB | 00m00s [365/391] Installing libuv-1:1.49.0-1.f 100% | 69.7 MiB/s | 571.0 KiB | 00m00s [366/391] Installing cmake-data-0:3.28. 100% | 141.4 MiB/s | 8.5 MiB | 00m00s [367/391] Installing cmake-0:3.28.3-7.f 100% | 479.5 MiB/s | 31.6 MiB | 00m00s [368/391] Installing lzo-0:2.10-13.fc41 100% | 164.5 MiB/s | 168.5 KiB | 00m00s [369/391] Installing xapian-core-libs-0 100% | 414.9 MiB/s | 2.1 MiB | 00m00s [370/391] Installing doxygen-2:1.12.0-1 100% | 446.8 MiB/s | 19.2 MiB | 00m00s [371/391] Installing python3-tables-0:3 100% | 468.1 MiB/s | 10.3 MiB | 00m00s [372/391] Installing fmt-devel-0:11.0.2 100% | 282.4 MiB/s | 578.4 KiB | 00m00s [373/391] Installing gettext-devel-0:0. 100% | 329.8 MiB/s | 1.0 MiB | 00m00s [374/391] Installing netcdf-cxx4-devel- 100% | 154.5 MiB/s | 474.7 KiB | 00m00s [375/391] Installing sundials-mpich-dev 100% | 640.3 MiB/s | 12.2 MiB | 00m00s [376/391] Installing petsc-mpich-devel- 100% | 508.6 MiB/s | 9.7 MiB | 00m00s [377/391] Installing petsc-openmpi-deve 100% | 511.3 MiB/s | 10.2 MiB | 00m00s [378/391] Installing sundials-openmpi-d 100% | 676.3 MiB/s | 12.2 MiB | 00m00s [379/391] Installing python3-boutdata-0 100% | 272.6 MiB/s | 558.2 KiB | 00m00s [380/391] Installing python3-zoidberg-0 100% | 128.6 MiB/s | 526.6 KiB | 00m00s [381/391] Installing python3-sphinx-1:7 100% | 282.9 MiB/s | 11.0 MiB | 00m00s [382/391] Installing sundials-devel-0:6 100% | 654.0 MiB/s | 11.1 MiB | 00m00s [383/391] Installing gcc-c++-0:14.2.1-4 100% | 449.0 MiB/s | 38.2 MiB | 00m00s [384/391] Installing annobin-plugin-gcc 100% | 74.2 MiB/s | 987.3 KiB | 00m00s [385/391] Installing gcc-plugin-annobin 100% | 5.6 MiB/s | 62.6 KiB | 00m00s [386/391] Installing flexiblas-devel-0: 100% | 680.4 MiB/s | 4.8 MiB | 00m00s [387/391] Installing fftw-devel-0:3.3.1 100% | 283.5 MiB/s | 290.3 KiB | 00m00s [388/391] Installing mpark-variant-deve 100% | 116.4 MiB/s | 119.2 KiB | 00m00s [389/391] Installing systemd-rpm-macros 100% | 0.0 B/s | 9.9 KiB | 00m00s [390/391] Installing m4-0:1.4.19-10.fc4 100% | 195.1 MiB/s | 599.2 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [391/391] Installing chrpath-0:0.16-24. 100% | 106.8 KiB/s | 56.4 KiB | 00m01s Complete! Finish: build setup for bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Start: rpmbuild bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728345600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.4Ysk1a + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + test -d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + /usr/bin/rm -rf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.bLGZpO + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + rm -rf BOUT++-v5.2.0.dev574+ge3f21cd2f + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.2.0.dev574+ge3f21cd2f.tar.xz + STATUS=0 + '[' 0 -ne 0 ']' + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py + rm -rf externalpackages/mpark.variant/ + mkdir -p externalpackages/mpark.variant/include/ + rm -rf tools/pylib/boutdata + rm -rf tools/pylib/boututils ++ find -L tools/pylib/ -type f ++ grep -v _boutcore_build + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/README.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/.gitignore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5hN3rm + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + for mpi in openmpi mpich + mkdir build_openmpi + for mpi in openmpi mpich + mkdir build_mpich + for mpi in openmpi mpich + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64 + eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER; LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH; MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN; MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE; _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_; LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES; CMAKE_PREFIX_PATH=/usr/lib64/openmpi; export CMAKE_PREFIX_PATH; PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi; export MPI_PYTHON3_SITEARCH; MPI_HOME=/usr/lib64/openmpi; export MPI_HOME; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR; __MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME; __MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SUFFIX=_openmpi; export MPI_SUFFIX; MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB; PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN; test 0;' ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi -DBOUT_TEST_TIMEOUT=900 -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- Configuring BOUT++ version 5.2.0 -- The CXX compiler identification is GNU 14.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/bin/python3.13 (found version "3.13.0") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) CMake Warning (dev) at CMakeLists.txt:396 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python3: /usr/bin/python3.13 (found suitable version "3.13.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "1.26.4") -- Found Cython: TRUE (found version "3.0.11") -- Found Bash: /usr/bin/bash (found version "5.2.32") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/openmpi-x86_64/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt -- PVODE support: ON -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.2") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON CMake Warning at cmake/SetupBOUTThirdParty.cmake:217 (find_package): By not providing "FindADIOS2.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "ADIOS2", but CMake did not find one. Could not find a package configuration file provided by "ADIOS2" with any of the following names: ADIOS2Config.cmake adios2-config.cmake Add the installation prefix of "ADIOS2" to CMAKE_PREFIX_PATH or set "ADIOS2_DIR" to a directory containing one of the above files. If "ADIOS2" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): CMakeLists.txt:479 (include) -- ADIOS2 support: OFF -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: TRUE -- SLEPc support: OFF -- The C compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.22.5") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. -- Found Python3: /usr/bin/python3.13 (found version "3.13.0") found components: Interpreter -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2 -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.12.0") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON ADIOS2 support : OFF FFTW support : ON LAPACK support : TRUE OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi` to compile BOUT++ *** -- Configuring done (2.8s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: BOUT_TEST_TIMEOUT CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi + /usr/bin/cmake --build build_openmpi -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp [ 0%] Generating locale/es/libbout.gmo, _mo_file_es [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/precon/pvbbdpre.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/es/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/es/libbout.po [ 0%] Generating locale/de/libbout.gmo, _mo_file_de cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/de/ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/de/libbout.po [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/fr/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/fr/libbout.po /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/zh_CN/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/zh_CN/libbout.po [ 2%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/zh_TW/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/zh_TW/libbout.po gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/precon/band.cpp [ 2%] Built target mofiles [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/llnlmath.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvspgmr.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp [ 8%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o -Wl,-rpath,::::::::::::::::::::::::::: In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/iterativ.cpp /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvdiag.cpp [ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 11%] Built target pvpre [ 11%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o -Wl,-rpath,::::::::::::::::::::::::::: cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 11%] Built target pvode /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 14%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o [ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/field/field2d.cxx /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/bout++.cxx /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/field/field.cxx /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/field/field3d.cxx [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o 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No LaplaceXY available [-Wcpp] 41 | #warning LaplaceXY requires Hypre. No LaplaceXY available | ^~~~~~~ [ 37%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include 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-mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/laplacexz/laplacexz.cxx [ 40%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c 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-I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/pardiv/invert_pardiv.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_factory.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_region.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/coordinates.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:34, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/coordinates_accessor.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/data/gridfromfile.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/data/gridfromoptions.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/difops.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx:471:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized] 471 | mesh->wait(xout); | ~~~~~~~~~~^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx:442:20: note: ‘xout’ was declared here 442 | comm_handle xin, xout; | ^~~~ [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/index_derivs.cxx [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation_xz.cxx In file included from /usr/include/c++/14/bits/shared_ptr.h:53, from /usr/include/c++/14/memory:80, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field.hxx:36, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:34, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/options.hxx:43, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/deriv_store.hxx:42, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:48, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.hxx:8, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx:36: In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/14/bits/shared_ptr.h:561:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:270:44, inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field3d.hxx:204:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx:2300:7: /usr/include/c++/14/bits/shared_ptr_base.h:1671:16: warning: potential null pointer dereference [-Wnull-dereference] 1671 | { return _M_ptr != nullptr; } | ^~~~~~ In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/14/bits/shared_ptr.h:561:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:270:44, inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:106:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx:2311:7: /usr/include/c++/14/bits/shared_ptr_base.h:1671:16: warning: potential null pointer dereference [-Wnull-dereference] 1671 | { return _M_ptr != nullptr; } | ^~~~~~ [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/bilinear_xz.cxx [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/hermite_spline_xz.cxx [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/hermite_spline_z.cxx [ 54%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -c 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-fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o -MF CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/adios_object.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/bout_types.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/boutcomm.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/boutexception.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/derivs.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/generator_context.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ In file included from /usr/include/openmpi-x86_64/ncFile.h:2, from /usr/include/openmpi-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_netcdf.cxx:5: /usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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/usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 In member function ‘__ct ’, inlined from ‘_Construct’ at /usr/include/c++/14/bits/stl_construct.h:119:7, inlined from ‘construct’ at /usr/include/c++/14/bits/alloc_traits.h:657:19, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:607:39, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:969:16, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:1713:14, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr.h:463:59, inlined from ‘make_shared’ at /usr/include/c++/14/bits/shared_ptr.h:1008:39, inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:428:38, inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:226:14, inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/laplace/impls/spt/spt.cxx:68:21: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 75 | data = new T[len]; | ^ /usr/include/c++/14/new: In member function ‘__ct_base ’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.1.0 lib/libbout++.so.5.1.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 94%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 94%] Generating resolve_enum.pxd [ 94%] Generating boutpp.pyx [ 94%] Generating helper.cxx [ 97%] Generating boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/helper.cxx [ 97%] Generating helper.h cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/helper.h [ 97%] Generating libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.13 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared performance hint: libboutpp.pyx:2065:5: Exception check on 'callback' will always require the GIL to be acquired. Possible solutions: 1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'callback' to allow an error code to be returned. cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/helper.cxx [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx In file included from /usr/include/numpy/ndarraytypes.h:1929, from /usr/include/numpy/ndarrayobject.h:12, from /usr/include/numpy/arrayobject.h:5, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:1268: /usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:40864:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 40864 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:9290:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 9290 | return __pyx_r; | ^~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:8933:12: note: ‘__pyx_r’ was declared here 8933 | CELL_LOC __pyx_r; | ^~~~~~~ In function ‘__pyx_pf_9libboutpp_54bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’, inlined from ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:64913:42: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:65007:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 65007 | __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2990, __pyx_L1_error) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:10801:18: note: ‘__pyx_r’ was declared here 10801 | BRACKET_METHOD __pyx_r; | ^~~~~~~ [100%] Linking CXX shared library libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-313-x86_64-linux-gnu.so -o libboutpp.cpython-313-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib: ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target boutpp.cpython-313-x86_64-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 0 + PYPA= + LDPA=/usr/lib64/openmpi/lib ++ pwd + export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/ + PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/ ++ pwd + export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib/ + LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib/ + /usr/bin/cmake --build build_openmpi/manual -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual/docs cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual/docs Running Sphinx v7.3.7 breathe module not installed recommonmark module not installed making output directory... done building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 47 source files that are out of date updating environment: [new config] 47 added, 0 changed, 0 removed reading sources... [ 2%] _apidoc/boutdata reading sources... [ 4%] _apidoc/boutpp reading sources... [ 6%] _apidoc/boututils No mlab available reading sources... [ 9%] _apidoc/zoidberg reading sources... [ 11%] api_reference reading sources... [ 13%] developer_docs/code_layout reading sources... [ 15%] developer_docs/contributing reading sources... [ 17%] developer_docs/data_types reading sources... [ 19%] developer_docs/file_io reading sources... [ 21%] developer_docs/git_basics reading sources... [ 23%] developer_docs/mesh reading sources... [ 26%] developer_docs/natural_language reading sources... [ 28%] developer_docs/performance_profiling reading sources... [ 30%] developer_docs/petsc_interface reading sources... [ 32%] index reading sources... [ 34%] user_docs/BOUT_Gradperp_op reading sources... [ 36%] user_docs/adios2 reading sources... [ 38%] user_docs/advanced_install reading sources... [ 40%] user_docs/algebraic_operators reading sources... [ 43%] user_docs/boundary_options reading sources... [ 45%] user_docs/bout_functions_for_physics reading sources... [ 47%] user_docs/bout_options reading sources... [ 49%] user_docs/coordinates reading sources... [ 51%] user_docs/differential_operators reading sources... [ 53%] user_docs/eigenvalue_solver reading sources... [ 55%] user_docs/gpu_support reading sources... [ 57%] user_docs/input_grids reading sources... [ 60%] user_docs/installing reading sources... [ 62%] user_docs/introduction reading sources... [ 64%] user_docs/invertable_operator reading sources... [ 66%] user_docs/laplacian reading sources... [ 68%] user_docs/makefiles reading sources... [ 70%] user_docs/new_in_v5 reading sources... [ 72%] user_docs/nonlocal reading sources... [ 74%] user_docs/output_and_post reading sources... [ 77%] user_docs/parallel-transforms reading sources... [ 79%] user_docs/petsc reading sources... [ 81%] user_docs/physics_models reading sources... [ 83%] user_docs/preconditioning reading sources... [ 85%] user_docs/python reading sources... 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[100%] user_docs/variable_init /usr/lib/python3.13/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: No module named 'enthought' /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced. docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation. WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: No module named 'crosslines' WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: No module named 'tvtk' WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: No module named 'tvtk' /usr/lib/python3.13/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: No module named 'past' /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation. /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation. /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation. looking for now-outdated files... /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.13/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found. none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'repository_branch' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... done copying extra files... done done writing output... [ 2%] _apidoc/boutdata writing output... [ 4%] _apidoc/boutpp writing output... [ 6%] _apidoc/boututils writing output... [ 9%] _apidoc/zoidberg writing output... [ 11%] api_reference writing output... [ 13%] developer_docs/code_layout writing output... [ 15%] developer_docs/contributing writing output... [ 17%] developer_docs/data_types writing output... [ 19%] developer_docs/file_io writing output... [ 21%] developer_docs/git_basics writing output... [ 23%] developer_docs/mesh writing output... [ 26%] developer_docs/natural_language writing output... [ 28%] developer_docs/performance_profiling writing output... [ 30%] developer_docs/petsc_interface writing output... [ 32%] index writing output... [ 34%] user_docs/BOUT_Gradperp_op writing output... [ 36%] user_docs/adios2 writing output... [ 38%] user_docs/advanced_install writing output... [ 40%] user_docs/algebraic_operators writing output... [ 43%] user_docs/boundary_options writing output... [ 45%] user_docs/bout_functions_for_physics writing output... [ 47%] user_docs/bout_options writing output... [ 49%] user_docs/coordinates writing output... [ 51%] user_docs/differential_operators writing output... [ 53%] user_docs/eigenvalue_solver writing output... [ 55%] user_docs/gpu_support writing output... [ 57%] user_docs/input_grids writing output... [ 60%] user_docs/installing writing output... [ 62%] user_docs/introduction writing output... [ 64%] user_docs/invertable_operator writing output... [ 66%] user_docs/laplacian writing output... [ 68%] user_docs/makefiles writing output... [ 70%] user_docs/new_in_v5 writing output... [ 72%] user_docs/nonlocal writing output... [ 74%] user_docs/output_and_post writing output... [ 77%] user_docs/parallel-transforms writing output... [ 79%] user_docs/petsc writing output... [ 81%] user_docs/physics_models writing output... [ 83%] user_docs/preconditioning writing output... [ 85%] user_docs/python writing output... [ 87%] user_docs/python_boutpp writing output... [ 89%] user_docs/quickstart writing output... [ 91%] user_docs/running_bout writing output... [ 94%] user_docs/staggered_grids writing output... [ 96%] user_docs/testing writing output... [ 98%] user_docs/time_integration writing output... [100%] user_docs/variable_init /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator.normal -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator.normal -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:146: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx' generating indices... /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:185: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/time_integration.rst:1030: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' genindex py-modindex done writing additional pages... search done copying images... [ 4%] figs/layout1.png copying images... [ 8%] figs/layout2.png copying images... [ 12%] figs/memory.png copying images... [ 15%] figs/petsc_interface_overview.png copying images... [ 19%] figs/operator_stencil_uml.png copying images... [ 23%] figs/petsc_vector_set.png copying images... [ 27%] figs/fluid_norm_mc.png copying images... [ 31%] figs/diffStencils.png copying images... [ 35%] figs/topology_cross_section.svg copying images... [ 38%] figs/topology_schematic.svg copying images... 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The HTML pages are in docs. cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 0 + export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib + LD_LIBRARY_PATH=/usr/lib64/openmpi/lib + export PYTHONPATH= + PYTHONPATH= + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64 + eval 'unset MPI_COMPILER; unset LD_LIBRARY_PATH; unset MPI_MAN; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset _LMFILES_; unset LOADEDMODULES; unset CMAKE_PREFIX_PATH; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_HOME; unset MPI_FORTRAN_MOD_DIR; unset __MODULES_LMALTNAME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SUFFIX; unset MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64 + eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH; MPI_COMPILER=mpich-x86_64; export MPI_COMPILER; MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE; MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN; MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH; _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_; LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich; export MPI_PYTHON3_SITEARCH; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR; MPI_HOME=/usr/lib64/mpich; export MPI_HOME; __MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG; MPI_SUFFIX=_mpich; export MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH; MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB; PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN; test 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.13/site-packages/mpich -DBOUT_TEST_TIMEOUT=900 -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- Configuring BOUT++ version 5.2.0 -- The CXX compiler identification is GNU 14.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/bin/python3.13 (found version "3.13.0") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) CMake Warning (dev) at CMakeLists.txt:396 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python3: /usr/bin/python3.13 (found suitable version "3.13.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "1.26.4") -- Found Cython: TRUE (found version "3.0.11") -- Found Bash: /usr/bin/bash (found version "5.2.32") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.1") -- Found MPI: TRUE (found version "4.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/mpich-x86_64/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt -- PVODE support: ON -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.2") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON CMake Warning at cmake/SetupBOUTThirdParty.cmake:217 (find_package): By not providing "FindADIOS2.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "ADIOS2", but CMake did not find one. Could not find a package configuration file provided by "ADIOS2" with any of the following names: ADIOS2Config.cmake adios2-config.cmake Add the installation prefix of "ADIOS2" to CMAKE_PREFIX_PATH or set "ADIOS2_DIR" to a directory containing one of the above files. If "ADIOS2" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): CMakeLists.txt:479 (include) -- ADIOS2 support: OFF -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: TRUE -- SLEPc support: OFF -- The C compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.22.5") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. -- Found Python3: /usr/bin/python3.13 (found version "3.13.0") found components: Interpreter -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2 -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.12.0") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON ADIOS2 support : OFF FFTW support : ON LAPACK support : TRUE OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich` to compile BOUT++ *** -- Configuring done (3.9s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: BOUT_TEST_TIMEOUT CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich + /usr/bin/cmake --build build_mpich -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 0%] Generating locale/de/libbout.gmo, _mo_file_de [ 0%] Generating locale/es/libbout.gmo, _mo_file_es cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/es/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/de/ [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/precon/pvbbdpre.cpp [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/es/libbout.po cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/de/libbout.po [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/fr/ [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/zh_CN/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/fr/libbout.po cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/zh_CN/libbout.po [ 2%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/zh_TW/ cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/locale/zh_TW/libbout.po gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/precon/band.cpp [ 2%] Built target mofiles [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/llnlmath.cpp [ 8%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o -Wl,-rpath,::::::::::::::::::::::::: [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvspgmr.cpp In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/iterativ.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so [ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/cvdiag.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 11%] Built target pvpre [ 11%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 11%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o -Wl,-rpath,::::::::::::::::::::::::: cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 11%] Built target pvode /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 14%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/bout++.cxx /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer 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-mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/field/field.cxx [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic 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-march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/field/field_factory.cxx [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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Building CXX object CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include 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Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/impls/multigrid/multigrid_solver.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include 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CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include 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CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/laplacexy2/laplacexy2_hypre.cxx In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/laplacexy2/laplacexy2_hypre.cxx:1: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp] 41 | #warning LaplaceXY requires Hypre. No LaplaceXY available | ^~~~~~~ [ 37%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include 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-mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/laplacexz/laplacexz.cxx [ 40%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/pardiv/invert_pardiv.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_factory.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_region.cxx [ 42%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/coordinates.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:34, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/data/gridfromfile.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/data/gridfromoptions.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/difops.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx:471:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized] 471 | mesh->wait(xout); | ~~~~~~~~~~^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/fv_ops.cxx:442:20: note: ‘xout’ was declared here 442 | comm_handle xin, xout; | ^~~~ [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/index_derivs.cxx [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation_xz.cxx [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/bilinear_xz.cxx In file included from /usr/include/c++/14/bits/shared_ptr.h:53, from /usr/include/c++/14/memory:80, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field.hxx:36, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:34, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/options.hxx:43, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/deriv_store.hxx:42, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:48, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.hxx:8, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx:36: In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/14/bits/shared_ptr.h:561:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:270:44, inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field3d.hxx:204:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx:2300:7: /usr/include/c++/14/bits/shared_ptr_base.h:1671:16: warning: potential null pointer dereference [-Wnull-dereference] 1671 | { return _M_ptr != nullptr; } | ^~~~~~ In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/14/bits/shared_ptr.h:561:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:270:44, inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:106:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/impls/bout/boutmesh.cxx:2311:7: /usr/include/c++/14/bits/shared_ptr_base.h:1671:16: warning: potential null pointer dereference [-Wnull-dereference] 1671 | { return _M_ptr != nullptr; } | ^~~~~~ [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/hermite_spline_xz.cxx [ 51%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/hermite_spline_z.cxx [ 54%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/interpolation_z.cxx [ 54%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/interpolation/lagrange_4pt_xz.cxx [ 54%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/mesh/parallel/identity.cxx [ 57%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/boutcomm.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/boutexception.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/derivs.cxx [ 80%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/generator_context.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/hyprelib.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/msg_stack.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_ini.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_io.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_netcdf.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_adios.cxx [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/optionsreader.cxx In file included from /usr/include/mpich-x86_64/ncFile.h:2, from /usr/include/mpich-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_io.cxx:7: /usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ In file included from /usr/include/mpich-x86_64/ncFile.h:2, from /usr/include/mpich-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/options/options_netcdf.cxx:5: /usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/sys/output.cxx [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o CMakeFiles/bout++.dir/src/physics/snb.cxx.o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o" CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o" CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o" CMakeFiles/bout++.dir/src/solver/solver.cxx.o CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib: /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/libfmt.so.11.0.2 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libnetcdf.so /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 In member function ‘__ct ’, inlined from ‘_Construct’ at /usr/include/c++/14/bits/stl_construct.h:119:7, inlined from ‘construct’ at /usr/include/c++/14/bits/alloc_traits.h:657:19, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:607:39, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:969:16, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr_base.h:1713:14, inlined from ‘__ct ’ at /usr/include/c++/14/bits/shared_ptr.h:463:59, inlined from ‘make_shared’ at /usr/include/c++/14/bits/shared_ptr.h:1008:39, inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:428:38, inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:226:14, inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/src/invert/laplace/impls/spt/spt.cxx:68:21: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 75 | data = new T[len]; | ^ /usr/include/c++/14/new: In member function ‘__ct_base ’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.1.0 lib/libbout++.so.5.1.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 94%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 94%] Generating resolve_enum.pxd [ 97%] Generating boutcpp.pxd [ 97%] Generating helper.cxx [ 97%] Generating boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/helper.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx [ 97%] Generating helper.h cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.13 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/helper.h [ 97%] Generating libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.13 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared performance hint: libboutpp.pyx:2065:5: Exception check on 'callback' will always require the GIL to be acquired. Possible solutions: 1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'callback' to allow an error code to be returned. cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/helper.cxx [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_313_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build -I/usr/include/python3.13 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp In file included from /usr/include/numpy/ndarraytypes.h:1929, from /usr/include/numpy/ndarrayobject.h:12, from /usr/include/numpy/arrayobject.h:5, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:1268: /usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:40864:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 40864 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:9290:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 9290 | return __pyx_r; | ^~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:8933:12: note: ‘__pyx_r’ was declared here 8933 | CELL_LOC __pyx_r; | ^~~~~~~ In function ‘__pyx_pf_9libboutpp_54bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’, inlined from ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:64913:42: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:65007:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 65007 | __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2990, __pyx_L1_error) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_55bracket(_object*, _object* const*, long, _object*)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:10801:18: note: ‘__pyx_r’ was declared here 10801 | BRACKET_METHOD __pyx_r; | ^~~~~~~ [100%] Linking CXX shared library libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-313-x86_64-linux-gnu.so -o libboutpp.cpython-313-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib: ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target boutpp.cpython-313-x86_64-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 0 + PYPA= + LDPA=/usr/lib64/mpich/lib ++ pwd + export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/ + PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/ ++ pwd + export LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib/ + LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib/ + /usr/bin/cmake --build build_mpich/manual -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual/docs cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual/docs Running Sphinx v7.3.7 breathe module not installed recommonmark module not installed making output directory... done building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 47 source files that are out of date updating environment: [new config] 47 added, 0 changed, 0 removed reading sources... [ 2%] _apidoc/boutdata reading sources... [ 4%] _apidoc/boutpp reading sources... [ 6%] _apidoc/boututils No mlab available reading sources... [ 9%] _apidoc/zoidberg reading sources... [ 11%] api_reference reading sources... [ 13%] developer_docs/code_layout reading sources... [ 15%] developer_docs/contributing reading sources... [ 17%] developer_docs/data_types reading sources... [ 19%] developer_docs/file_io reading sources... [ 21%] developer_docs/git_basics reading sources... [ 23%] developer_docs/mesh reading sources... [ 26%] developer_docs/natural_language reading sources... [ 28%] developer_docs/performance_profiling reading sources... [ 30%] developer_docs/petsc_interface reading sources... [ 32%] index reading sources... [ 34%] user_docs/BOUT_Gradperp_op reading sources... [ 36%] user_docs/adios2 reading sources... [ 38%] user_docs/advanced_install reading sources... [ 40%] user_docs/algebraic_operators reading sources... [ 43%] user_docs/boundary_options reading sources... [ 45%] user_docs/bout_functions_for_physics reading sources... [ 47%] user_docs/bout_options reading sources... [ 49%] user_docs/coordinates reading sources... [ 51%] user_docs/differential_operators reading sources... [ 53%] user_docs/eigenvalue_solver reading sources... [ 55%] user_docs/gpu_support reading sources... [ 57%] user_docs/input_grids reading sources... [ 60%] user_docs/installing reading sources... [ 62%] user_docs/introduction reading sources... [ 64%] user_docs/invertable_operator reading sources... [ 66%] user_docs/laplacian reading sources... [ 68%] user_docs/makefiles reading sources... [ 70%] user_docs/new_in_v5 reading sources... [ 72%] user_docs/nonlocal reading sources... [ 74%] user_docs/output_and_post reading sources... [ 77%] user_docs/parallel-transforms reading sources... [ 79%] user_docs/petsc reading sources... [ 81%] user_docs/physics_models reading sources... [ 83%] user_docs/preconditioning reading sources... [ 85%] user_docs/python reading sources... [ 87%] user_docs/python_boutpp reading sources... [ 89%] user_docs/quickstart reading sources... [ 91%] user_docs/running_bout reading sources... [ 94%] user_docs/staggered_grids reading sources... [ 96%] user_docs/testing reading sources... [ 98%] user_docs/time_integration reading sources... [100%] user_docs/variable_init /usr/lib/python3.13/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: No module named 'enthought' /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced. docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation. WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: No module named 'crosslines' WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: No module named 'tvtk' WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: No module named 'tvtk' /usr/lib/python3.13/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: No module named 'past' looking for now-outdated files... WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: No module named 'past' /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation. /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation. /usr/lib/python3.13/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.13/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.13/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found. none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'repository_branch' given WARNING: unsupported theme option 'path_to_docs' given done copying assets... copying static files... WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying extra files... done done writing output... [ 2%] _apidoc/boutdata writing output... [ 4%] _apidoc/boutpp writing output... [ 6%] _apidoc/boututils writing output... [ 9%] _apidoc/zoidberg writing output... [ 11%] api_reference writing output... [ 13%] developer_docs/code_layout writing output... [ 15%] developer_docs/contributing writing output... [ 17%] developer_docs/data_types writing output... [ 19%] developer_docs/file_io writing output... [ 21%] developer_docs/git_basics writing output... [ 23%] developer_docs/mesh writing output... [ 26%] developer_docs/natural_language writing output... [ 28%] developer_docs/performance_profiling writing output... [ 30%] developer_docs/petsc_interface writing output... [ 32%] index writing output... [ 34%] user_docs/BOUT_Gradperp_op writing output... [ 36%] user_docs/adios2 writing output... [ 38%] user_docs/advanced_install writing output... [ 40%] user_docs/algebraic_operators writing output... [ 43%] user_docs/boundary_options writing output... [ 45%] user_docs/bout_functions_for_physics writing output... [ 47%] user_docs/bout_options writing output... [ 49%] user_docs/coordinates writing output... [ 51%] user_docs/differential_operators writing output... [ 53%] user_docs/eigenvalue_solver writing output... [ 55%] user_docs/gpu_support writing output... [ 57%] user_docs/input_grids writing output... [ 60%] user_docs/installing writing output... [ 62%] user_docs/introduction writing output... [ 64%] user_docs/invertable_operator writing output... [ 66%] user_docs/laplacian writing output... [ 68%] user_docs/makefiles writing output... [ 70%] user_docs/new_in_v5 writing output... [ 72%] user_docs/nonlocal writing output... [ 74%] user_docs/output_and_post writing output... [ 77%] user_docs/parallel-transforms writing output... [ 79%] user_docs/petsc writing output... [ 81%] user_docs/physics_models writing output... [ 83%] user_docs/preconditioning writing output... [ 85%] user_docs/python writing output... [ 87%] user_docs/python_boutpp writing output... [ 89%] user_docs/quickstart writing output... [ 91%] user_docs/running_bout writing output... [ 94%] user_docs/staggered_grids writing output... [ 96%] user_docs/testing writing output... [ 98%] user_docs/time_integration writing output... [100%] user_docs/variable_init /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator.normal -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator.normal -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ /usr/lib/python3.13/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:146: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx' generating indices... /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:185: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode. /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual/sphinx/user_docs/time_integration.rst:1030: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' genindex py-modindex done writing additional pages... search done copying images... [ 4%] figs/layout1.png copying images... [ 8%] figs/layout2.png copying images... [ 12%] figs/memory.png copying images... [ 15%] figs/petsc_interface_overview.png copying images... [ 19%] figs/operator_stencil_uml.png copying images... [ 23%] figs/petsc_vector_set.png copying images... [ 27%] figs/fluid_norm_mc.png copying images... [ 31%] figs/diffStencils.png copying images... [ 35%] figs/topology_cross_section.svg copying images... [ 38%] figs/topology_schematic.svg copying images... 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The HTML pages are in docs. cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 0 + export LD_LIBRARY_PATH=/usr/lib64/mpich/lib + LD_LIBRARY_PATH=/usr/lib64/mpich/lib + export PYTHONPATH= + PYTHONPATH= + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64 + eval 'unset LD_LIBRARY_PATH; unset MPI_COMPILER; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset MPI_PYTHON_SITEARCH; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_FORTRAN_MOD_DIR; unset MPI_HOME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SYSCONFIG; unset MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_PYTHON2_SITEARCH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.DIobqT + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + '[' /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT ++ dirname /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT + mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + mkdir /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + for mpi in openmpi mpich + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64 + eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER; LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH; MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN; MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE; _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_; LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES; CMAKE_PREFIX_PATH=/usr/lib64/openmpi; export CMAKE_PREFIX_PATH; PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi; export MPI_PYTHON3_SITEARCH; MPI_HOME=/usr/lib64/openmpi; export MPI_HOME; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR; __MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME; __MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SUFFIX=_openmpi; export MPI_SUFFIX; MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB; PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN; test 0;' ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + DESTDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT + /usr/bin/cmake --install build_openmpi -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/vector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/band.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.1.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.1.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/where.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.1.0 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.1.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.1.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/openmpi/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/openmpi/lib + rm -rf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/bout++ + mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/modulefiles/bout++ + cat + DESTDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT + /usr/bin/cmake --install build_openmpi/manual -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++/ -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//objects.inv -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//searchindex.js -- Installing: 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/contents.png -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/navigation.png -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/sphinxdoc.css -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/basic.css -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/doctools.js -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/documentation_options.js -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/file.png -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/language_data.js -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/minus.png -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/plus.png -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/searchtools.js -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/sphinx_highlight.js -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/pygments.css + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64 + eval 'unset MPI_COMPILER; unset LD_LIBRARY_PATH; unset MPI_MAN; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset _LMFILES_; unset LOADEDMODULES; unset CMAKE_PREFIX_PATH; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_HOME; unset MPI_FORTRAN_MOD_DIR; unset __MODULES_LMALTNAME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SUFFIX; unset MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64 + eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH; MPI_COMPILER=mpich-x86_64; export MPI_COMPILER; MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE; MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN; MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH; _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_; LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich; export MPI_PYTHON3_SITEARCH; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR; MPI_HOME=/usr/lib64/mpich; export MPI_HOME; __MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG; MPI_SUFFIX=_mpich; export MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH; MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB; PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN; test 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + DESTDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT + /usr/bin/cmake --install build_mpich -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/vector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/band.h -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.1.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.1.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vector2d.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boutexception.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boutcomm.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout_types.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vectormetric.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vector3d.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/variant.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/uncopyable.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/type_name.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/timer.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/range.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/gettext.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/generator_context.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/expressionparser.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/surfaceiter.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sundials_backports.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/solverfactory.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/solver.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/snb.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/slepclib.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/single_index_ops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/scorepwrapper.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/rvec.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/rkscheme.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/region.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/rajalib.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/physicsmodel.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/petsclib.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/petsc_interface.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/paralleltransform.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_region.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich ++ grep -E '/libbout|/libpvode|/libpvpre' + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.1.0 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.1.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.1.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT//usr/lib64/python3.13/site-packages/mpich/boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib + rm -rf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/bout++ + mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/modulefiles/bout++ + cat + DESTDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT + /usr/bin/cmake --install build_mpich/manual -- Install configuration: "RelWithDebInfo" -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++/ -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//objects.inv -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//searchindex.js -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/init_balloon.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/stagLocations.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/quickstart_conduction_example.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/sod_result.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/interchange_inst_test.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/snb-step.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/snb-sinusoidal.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/par_laplace.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMatrix.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMesh.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/poincare.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/elliptic_grid.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/grid_gen.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/boutmesh-comms.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/topology_schematic.svg -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/topology_cross_section.svg -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/diffStencils.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/fluid_norm_mc.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_vector_set.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/operator_stencil_uml.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_interface_overview.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/memory.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/layout2.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_images/layout1.png -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//search.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//py-modindex.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//genindex.html -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/variable_init.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/time_integration.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/testing.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/staggered_grids.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/running_bout.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/quickstart.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/python_boutpp.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/python.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/preconditioning.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/physics_models.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/petsc.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/parallel-transforms.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/output_and_post.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/nonlocal.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/new_in_v5.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/makefiles.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/laplacian.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/invertable_operator.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/introduction.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/installing.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/input_grids.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/gpu_support.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/eigenvalue_solver.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/differential_operators.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/coordinates.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/bout_options.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/boundary_options.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/algebraic_operators.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/advanced_install.html -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//user_docs/adios2.html -- Installing: 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/language_data.js -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/minus.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/plus.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/searchtools.js -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/sphinx_highlight.js -- Installing: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++//_static/pygments.css + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64 + eval 'unset LD_LIBRARY_PATH; unset MPI_COMPILER; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset MPI_PYTHON_SITEARCH; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_FORTRAN_MOD_DIR; unset MPI_HOME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SYSCONFIG; unset MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_PYTHON2_SITEARCH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + /usr/lib/rpm/find-lang.sh /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT libbout + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.2.0.dev574+ge3f21cd2f-1.fc42 --unique-debug-suffix -5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 --unique-debug-src-base bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f find-debuginfo: starting Extracting debug info from 8 files DWARF-compressing 8 files sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 21681 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutconfig/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/mpich/boutpp/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutconfig/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/lib64/python3.13/site-packages/openmpi/boutpp/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents Scanned 170 directories and 882 files, processed 54 inodes, 4 modified (0 replaced + 4 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.IaQOrV + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + for mpi in openmpi mpich + fail=1 + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64 + eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER; LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH; MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN; MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE; _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_; LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES; CMAKE_PREFIX_PATH=/usr/lib64/openmpi; export CMAKE_PREFIX_PATH; PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi; export MPI_PYTHON3_SITEARCH; MPI_HOME=/usr/lib64/openmpi; export MPI_HOME; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR; __MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME; __MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SUFFIX=_openmpi; export MPI_SUFFIX; MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB; PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN; test 0;' ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ~/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi ~/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + pushd build_openmpi + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest + make -j4 build-check /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 74 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 0%] Creating test-fci-boundary grid file cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib: /usr/bin/python3.13 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary/grid.fci.nc [ 1%] Built target pvpre [ 4%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend [ 4%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/src/gtest-all.cc make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 43%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 44%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y/wave.cxx [ 44%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/advection/advection.cxx [ 44%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' Making curvilinear poloidal grid creating grid... WARNING: Outputting 2D metrics, discarding metric information. [ 44%] Built target MMS-wave-1d-y make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 44%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion/diffusion.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 44%] Built target test-fci-boundary-grid make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 45%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/spatial/fci && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci/fci_mms.cxx [ 45%] Linking CXX executable advection cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 45%] Built target MMS-advection make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 45%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d/wave.cxx [ 45%] Linking CXX executable cyto cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 45%] Linking CXX executable fci_mms cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../../lib/libpvode.so.1.0.0 ../../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 45%] Built target MMS-spatial-fci make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 45%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 45%] Built target MMS-diffusion make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 48%] Built target boutpp.cpython-313-x86_64-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace/boutexcept.cxx [ 50%] Linking CXX executable boutexcept cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 50%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 50%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler/test_beuler.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 50%] Built target MMS-wave-1d make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx [ 51%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 51%] Built target test-yupdown-weights make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 51%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args/command-args.cxx [ 52%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.14.0 -o ../../../../../lib/libgtest.so.1.14.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" [ 54%] Linking CXX executable command-args cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 54%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" [ 54%] Linking CXX executable test_beuler cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 54%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications/test-communications.cxx [ 54%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 54%] Built target test_beuler make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 54%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 54%] Built target test-bout-override-default-option make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 54%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic/test_cyclic.cxx [ 54%] Linking CXX executable test-communications cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 55%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 55%] Built target test-coordinates-initialization make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 56%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2/test_delp2.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 56%] Built target test-communications make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 56%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade/test-datafile-facade.cxx [ 56%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.14.0 ../../../../../lib/libgtest.so.1.14.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 56%] Built target gtest make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability/2fluid.cxx [ 58%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered/2fluid.cxx [ 58%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Built target test-cyclic make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Built target test-delp2 make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata/test_griddata.cxx [ 59%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 59%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 59%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx [ 59%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 59%] Built target test-griddata make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 60%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-gyro && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro/test_gyro.cxx [ 60%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 60%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 60%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 60%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 60%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial/test_initial.cxx [ 60%] Linking CXX executable test_gyro cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 60%] Built target test-gyro make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 62%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interchange-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability/2fluid.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 62%] Built target test-drift-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 62%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate/test_interpolate.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 62%] Built target test-drift-instability-staggered make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z/test_interpolate.cxx [ 63%] Linking CXX executable test_initial cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Built target test-initial make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invertable-operator && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator/invertable_operator.cxx In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator/invertable_operator.cxx:4: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator::setup() [with T = Field3D; PetscErrorCode = int]’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19: required from here 51 | mySolver.setup(); | ~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:44: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ [ 63%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 63%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 63%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Built target test-interpolate make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invpar && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar/test_invpar.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Built target test-interpolate-z make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace/test_laplace.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Built target test-interchange-instability make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx [ 64%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Built target test-invertable-operator make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test_invpar cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 64%] Linking CXX executable test_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 66%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Built target test-laplace make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-short && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short/test-laplacexy.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Built target test-invpar make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexz && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz/test-laplacexz.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Built target test-laplace-petsc3d make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx [ 66%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Built target test-laplacexy-fv make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 66%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-naulin-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 67%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 67%] Built target test-laplacexy-short make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 67%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf/test-options-netcdf.cxx [ 68%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Built target test-laplacexz make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx [ 68%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Built target test-multigrid-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Built target test-naulin-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 70%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io/test-restart-io.cxx [ 71%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 71%] Built target test-options-netcdf make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting/test_restarting.cxx [ 71%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 71%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 71%] Linking CXX executable test_restarting cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 71%] Built target test-restart-io make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 72%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth/test_smooth.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 72%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-snb && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb/test_snb.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 72%] Built target test-petsc-laplace make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver/test_solver.cxx [ 74%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 74%] Linking CXX executable test_smooth cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash/squash.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Built target test-smooth make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 75%] Linking CXX executable test_snb cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 [ 75%] Linking CXX executable test_solver cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 75%] Linking CXX executable squash cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 75%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file/test_stopCheck.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift/test-twistshift.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Built target test-snb make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered/test-twistshift.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Built target test-solver make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 75%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec/testVec.cxx [ 77%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 77%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 77%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 77%] Built target test-twistshift make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown/test_yupdown.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 77%] Built target test-twistshift-staggered make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 78%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/get_par_bndry.cxx [ 79%] Linking CXX executable testVec cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target test-stopCheck-file make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/src/gmock-all.cc /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14 | for (int i = 0; i < fields.size(); i++) { | ~~^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target test-vec make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target boutpp [ 79%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl [ 79%] Linking CXX executable get_par_bndry cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target build-check-integrated-tests make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target test-fci-boundary make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target build-check-mms-tests [ 79%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.14.0 -o ../../../../../lib/libgmock.so.1.14.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../../../../lib/libgtest.so.1.14.0 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.14.0 ../../../../../lib/libgmock.so.1.14.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 79%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o [ 79%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field3d.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field2d.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout_test_main.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include 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tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_fieldgroup.cxx [ 82%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options_fields.cxx In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest-printers.h:122, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest-matchers.h:49, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:47, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest-death-test.h:43, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest.h:64, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/test_extras.hxx:4, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options.cxx:1: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options.cxx: In member function ‘virtual void OptionsTest_InvalidFormat_Test::TestBody()’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options.cxx:1100:27: warning: ignoring return value of ‘std::string fmt::v11::format(format_string, T&& ...) [with T = {Options}; std::string = std::__cxx11::basic_string; format_string = basic_format_string]’, declared with attribute ‘nodiscard’ [-Wunused-result] 1100 | EXPECT_THROW(fmt::format("{:nope}", Options{}), fmt::format_error); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/fmt/core.h:5, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:32, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:34, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/coordinates.hxx:36, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/test_extras.hxx:13: /usr/include/fmt/format.h:4363:31: note: declared here 4363 | FMT_NODISCARD FMT_INLINE auto format(format_string fmt, T&&... args) | ^~~~~~ [ 95%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_output.cxx [ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_range.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include 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-I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_timer.cxx [ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/lib ../../lib/libgmock.so.1.14.0 ../../lib/libbout++.so.5.1.0 ../../lib/libgtest.so.1.14.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_ida.so.6.7.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi 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--check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 48 make -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f 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'/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 2%] Built target gtest make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE 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'/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 4%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 8%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Built target bout++ make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 68%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi Start 1: serial_tests 1/1 Test #1: serial_tests ..................... Passed 4.16 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 4.17 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target check-unit-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-mms-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-mms-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 35 make -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 2%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 8%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 91%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 94%] Built target MMS-wave-1d-y make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 94%] Built target test-fci-boundary-grid make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 97%] Built target test-fci-boundary make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 97%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 97%] Built target MMS-diffusion make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target MMS-spatial-fci make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi Start 53: MMS-diffusion 1/8 Test #53: MMS-diffusion .................... Passed 11.32 sec Start 54: MMS-spatial-fci 2/8 Test #54: MMS-spatial-fci .................. Passed 8.64 sec Start 55: MMS-wave-1d 3/8 Test #55: MMS-wave-1d ...................... Passed 9.97 sec Start 56: MMS-wave-1d-y 4/8 Test #56: MMS-wave-1d-y .................... Passed 10.02 sec Start 57: MMS-bracket 5/8 Test #57: MMS-bracket ...................... Passed 1.46 sec Start 58: MMS-derivatives3 6/8 Test #58: MMS-derivatives3 ................. Passed 1.72 sec Start 59: MMS-shiftedmetricinterp 7/8 Test #59: MMS-shiftedmetricinterp .......... Passed 3.99 sec Start 60: MMS-upwinding3 8/8 Test #60: MMS-upwinding3 ................... Passed 1.95 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 49.08 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' Built target check-mms-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-integrated-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-integrated-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 55 make -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 1%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 5%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 58%] Built target bout++ make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 60%] Built target test-yupdown-weights make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Built target boutpp.cpython-313-x86_64-linux-gnu make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 63%] Built target boutpp make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 65%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 65%] Built target test_beuler make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 65%] Built target test-bout-override-default-option make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 67%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 67%] Built target test-communications make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 69%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 69%] Built target test-cyclic make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 70%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 70%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 72%] Built target test-drift-instability make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 72%] Built target test-drift-instability-staggered make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 74%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 76%] Built target test-gyro make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 76%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 78%] Built target test-interchange-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 78%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 80%] Built target test-interpolate-z make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 80%] Built target test-invertable-operator make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 81%] Built target test-invpar make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 81%] Built target test-laplace make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 83%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 83%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 85%] Built target test-laplacexy-short make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 85%] Built target test-laplacexz make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 87%] Built target test-multigrid-laplace make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 87%] Built target test-naulin-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 89%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 89%] Built target test-petsc-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 89%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 90%] Built target test-restart-io make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 90%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 92%] Built target test-smooth make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-snb/CMakeFiles/test-snb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 92%] Built target test-snb make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 94%] Built target test-solver make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 94%] Built target test-squash make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 96%] Built target test-stopCheck make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 96%] Built target test-stopCheck-file make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 98%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [ 98%] Built target test-twistshift-staggered make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target test-vec make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' [100%] Built target build-check-integrated-tests make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' ctest -R test- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi Start 2: test-backtrace 1/50 Test #2: test-backtrace ...................... Passed 0.82 sec Start 4: test-boutpp-collect 2/50 Test #4: test-boutpp-collect ................. Passed 1.52 sec Start 5: test-boutpp-collect-staggered 3/50 Test #5: test-boutpp-collect-staggered ....... Passed 1.51 sec Start 6: test-boutpp-legacy-model 4/50 Test #6: test-boutpp-legacy-model ............ Passed 1.60 sec Start 7: test-boutpp-mms-ddz 5/50 Test #7: test-boutpp-mms-ddz ................. Passed 1.45 sec Start 8: test-boutpp-print 6/50 Test #8: test-boutpp-print ................... Passed 1.44 sec Start 9: test-boutpp-simple-model 7/50 Test #9: test-boutpp-simple-model ............ Passed 1.62 sec Start 10: test-bout-override-default-option 8/50 Test #10: test-bout-override-default-option ... Passed 0.28 sec Start 11: test-command-args 9/50 Test #11: test-command-args ................... Passed 16.97 sec Start 12: test-communications 10/50 Test #12: test-communications ................. Passed 10.42 sec Start 13: test-coordinates-initialization 11/50 Test #13: test-coordinates-initialization ..... Passed 1.55 sec Start 14: test-cyclic 12/50 Test #14: test-cyclic ......................... Passed 17.53 sec Start 15: test-delp2 13/50 Test #15: test-delp2 .......................... Passed 20.63 sec Start 16: test-datafile-facade 14/50 Test #16: test-datafile-facade ................ Passed 4.09 sec Start 17: test-drift-instability 15/50 Test #17: test-drift-instability .............. Passed 5.28 sec Start 18: test-drift-instability-staggered 16/50 Test #18: test-drift-instability-staggered .... Passed 5.36 sec Start 19: test-fieldgroupComm 17/50 Test #19: test-fieldgroupComm ................. Passed 5.30 sec Start 20: test-fci-boundary 18/50 Test #20: test-fci-boundary ................... Passed 2.38 sec Start 21: test-griddata 19/50 Test #21: test-griddata ....................... Passed 1.92 sec Start 22: test-griddata-yboundary-guards 20/50 Test #22: test-griddata-yboundary-guards ...... Passed 10.07 sec Start 23: test-gyro 21/50 Test #23: test-gyro ........................... Passed 4.97 sec Start 24: test-initial 22/50 Test #24: test-initial ........................ Passed 10.19 sec Start 25: test-interchange-instability 23/50 Test #25: test-interchange-instability ........ Passed 8.63 sec Start 26: test-interpolate 24/50 Test #26: test-interpolate .................... Passed 18.36 sec Start 27: test-interpolate-z 25/50 Test #27: test-interpolate-z .................. Passed 6.45 sec Start 28: test-invertable-operator 26/50 Test #28: test-invertable-operator ............ Passed 3.44 sec Start 29: test-invpar 27/50 Test #29: test-invpar ......................... Passed 9.11 sec Start 30: test-laplace 28/50 Test #30: test-laplace ........................ Passed 16.97 sec Start 31: test-laplace-petsc3d 29/50 Test #31: test-laplace-petsc3d ................ Passed 10.09 sec Start 32: test-laplacexy-fv 30/50 Test #32: test-laplacexy-fv ................... Passed 9.78 sec Start 33: test-laplacexy-short 31/50 Test #33: test-laplacexy-short ................ Passed 17.45 sec Start 34: test-laplacexz 32/50 Test #34: test-laplacexz ...................... Passed 4.96 sec Start 35: test-multigrid-laplace 33/50 Test #35: test-multigrid-laplace .............. Passed 4.51 sec Start 36: test-naulin-laplace 34/50 Test #36: test-naulin-laplace ................. Passed 3.60 sec Start 37: test-options-netcdf 35/50 Test #37: test-options-netcdf ................. Passed 1.91 sec Start 38: test-petsc-laplace 36/50 Test #38: test-petsc-laplace .................. Passed 6.05 sec Start 39: test-petsc-laplace-MAST-grid 37/50 Test #39: test-petsc-laplace-MAST-grid ........ Passed 26.70 sec Start 40: test-restart-io 38/50 Test #40: test-restart-io ..................... Passed 6.01 sec Start 41: test-restarting 39/50 Test #41: test-restarting ..................... Passed 8.14 sec Start 42: test-smooth 40/50 Test #42: test-smooth ......................... Passed 6.42 sec Start 43: test-snb 41/50 Test #43: test-snb ............................ Passed 1.37 sec Start 44: test-solver 42/50 Test #44: test-solver ......................... Passed 2.91 sec Start 45: test-squash 43/50 Test #45: test-squash ......................... Passed 14.86 sec Start 46: test-stopCheck 44/50 Test #46: test-stopCheck ...................... Passed 0.37 sec Start 47: test-stopCheck-file 45/50 Test #47: test-stopCheck-file ................. Passed 7.46 sec Start 48: test-twistshift 46/50 Test #48: test-twistshift ..................... Passed 1.96 sec Start 49: test-twistshift-staggered 47/50 Test #49: test-twistshift-staggered ........... Passed 1.96 sec Start 50: test-vec 48/50 Test #50: test-vec ............................ Passed 1.71 sec Start 51: test-yupdown 49/50 Test #51: test-yupdown ........................ Passed 3.41 sec Start 52: test-yupdown-weights 50/50 Test #52: test-yupdown-weights ................ Passed 1.95 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 333.48 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' Built target check-integrated-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_openmpi' + popd ~/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64 + eval 'unset MPI_COMPILER; unset LD_LIBRARY_PATH; unset MPI_MAN; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset _LMFILES_; unset LOADEDMODULES; unset CMAKE_PREFIX_PATH; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_HOME; unset MPI_FORTRAN_MOD_DIR; unset __MODULES_LMALTNAME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SUFFIX; unset MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + fail=1 + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64 + eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH; MPI_COMPILER=mpich-x86_64; export MPI_COMPILER; MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE; MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN; MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH; _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_; LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich; export MPI_PYTHON3_SITEARCH; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR; MPI_HOME=/usr/lib64/mpich; export MPI_HOME; __MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG; MPI_SUFFIX=_mpich; export MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH; MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB; PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN; test 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.13/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ~/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich ~/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + pushd build_mpich + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j4 build-check /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 74 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 0%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/src/gtest-all.cc [ 1%] Built target pvpre [ 1%] Creating test-fci-boundary grid file cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib: /usr/bin/python3.13 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary/grid.fci.nc [ 4%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 43%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 43%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/advection/advection.cxx [ 44%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y/wave.cxx [ 44%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl Making curvilinear poloidal grid creating grid... WARNING: Outputting 2D metrics, discarding metric information. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 44%] Built target test-fci-boundary-grid make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 44%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion/diffusion.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 44%] Built target MMS-wave-1d-y make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 45%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/spatial/fci && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci/fci_mms.cxx [ 45%] Linking CXX executable advection cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 45%] Built target MMS-advection make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 45%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d/wave.cxx [ 45%] Linking CXX executable cyto cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 45%] Linking CXX executable fci_mms cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../../lib/libpvode.so.1.0.0 ../../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 45%] Built target MMS-spatial-fci make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 45%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 45%] Built target MMS-diffusion make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 48%] Built target boutpp.cpython-313-x86_64-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace/boutexcept.cxx [ 48%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 50%] Linking CXX executable boutexcept cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 50%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler/test_beuler.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 50%] Built target MMS-wave-1d make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx [ 51%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 52%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.14.0 -o ../../../../../lib/libgtest.so.1.14.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 52%] Built target test-yupdown-weights make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 52%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args/command-args.cxx [ 54%] Linking CXX executable command-args cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 54%] Linking CXX executable test_beuler cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 54%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 54%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications/test-communications.cxx [ 54%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 54%] Built target test_beuler make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 54%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 54%] Built target test-bout-override-default-option make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 54%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic/test_cyclic.cxx [ 55%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 55%] Linking CXX executable test-communications cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 55%] Built target test-coordinates-initialization make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 56%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2/test_delp2.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 56%] Built target test-communications make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 56%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade/test-datafile-facade.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.14.0 ../../../../../lib/libgtest.so.1.14.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 56%] Built target gtest make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability/2fluid.cxx [ 58%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 58%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Built target test-cyclic make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered/2fluid.cxx [ 58%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Built target test-datafile-facade make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fieldgroupComm && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Built target test-delp2 make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata/test_griddata.cxx [ 59%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 59%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 59%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx [ 59%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 59%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 59%] Built target test-griddata make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 60%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-gyro && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro/test_gyro.cxx [ 60%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 60%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 60%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 60%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial/test_initial.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 60%] Built target test-drift-instability make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 62%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interchange-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability/2fluid.cxx [ 62%] Linking CXX executable test_gyro cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 62%] Built target test-gyro make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 62%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate/test_interpolate.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 62%] Built target test-drift-instability-staggered make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z/test_interpolate.cxx [ 63%] Linking CXX executable test_initial cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Built target test-initial make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invertable-operator && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator/invertable_operator.cxx In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator/invertable_operator.cxx:4: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator::setup() [with T = Field3D; PetscErrorCode = int]’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19: required from here 51 | mySolver.setup(); | ~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:44: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:447:66: note: declared here 447 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/mesh.hxx:451:65: note: declared here 451 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ [ 63%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 63%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 63%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Built target test-interpolate make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invpar && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar/test_invpar.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Built target test-interchange-instability make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace/test_laplace.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Built target test-interpolate-z make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx [ 64%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Built target test-invertable-operator make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-fv && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 64%] Linking CXX executable test_invpar cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 66%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Built target test-laplace make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-short && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short/test-laplacexy.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Built target test-invpar make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexz && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz/test-laplacexz.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Built target test-laplace-petsc3d make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-multigrid_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx [ 66%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Built target test-laplacexy-fv make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 66%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-naulin-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 67%] Built target test-laplacexy-short make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 67%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf/test-options-netcdf.cxx [ 67%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 68%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 68%] Built target test-laplacexz make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx [ 68%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 68%] Built target test-multigrid-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 68%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx [ 70%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 70%] Built target test-naulin-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 71%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io/test-restart-io.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 71%] Built target test-options-netcdf make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting/test_restarting.cxx [ 71%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 71%] Linking CXX executable test_restarting cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 71%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 71%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 72%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth/test_smooth.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 72%] Built target test-petsc-laplace make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-snb && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb/test_snb.cxx [ 72%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 72%] Built target test-restart-io make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver/test_solver.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash/squash.cxx [ 74%] Linking CXX executable test_smooth cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Built target test-smooth make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 75%] Linking CXX executable test_snb cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 75%] Linking CXX executable test_solver cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 75%] Linking CXX executable squash cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file/test_stopCheck.cxx [ 75%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Built target test-snb make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift/test-twistshift.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Built target test-stopCheck make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered/test-twistshift.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Built target test-solver make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 75%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec/testVec.cxx [ 75%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 77%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 77%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 77%] Built target test-twistshift make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown/test_yupdown.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 77%] Built target test-twistshift-staggered make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 78%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/get_par_bndry.cxx make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 78%] Built target test-stopCheck-file make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 78%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/src/gmock-all.cc [ 79%] Linking CXX executable testVec cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14 | for (int i = 0; i < fields.size(); i++) { | ~~^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target test-vec make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target boutpp [ 79%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl [ 79%] Linking CXX executable get_par_bndry cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../lib/libbout++.so.5.1.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target build-check-integrated-tests [ 79%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.14.0 -o ../../../../../lib/libgmock.so.1.14.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../../../../lib/libgtest.so.1.14.0 make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target test-fci-boundary make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target build-check-mms-tests cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.14.0 ../../../../../lib/libgmock.so.1.14.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 79%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o [ 79%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout_test_main.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field2d.cxx cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field3d.cxx /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 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tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/field/test_field_factory.cxx [ 82%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include 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CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode 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tests/unit/CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o -MF CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o.d -o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/invert/laplace/test_laplace_petsc3damg.cxx [ 90%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit 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tests/unit/CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/mesh/test_boundary_factory.cxx [ 91%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include 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tests/unit/CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options_fields.cxx In file included from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest-printers.h:122, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest-matchers.h:49, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:47, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest-death-test.h:43, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include/gtest/gtest.h:64, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/test_extras.hxx:4, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options.cxx:1: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options.cxx: In member function ‘virtual void OptionsTest_InvalidFormat_Test::TestBody()’: /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options.cxx:1100:27: warning: ignoring return value of ‘std::string fmt::v11::format(format_string, T&& ...) [with T = {Options}; std::string = std::__cxx11::basic_string; format_string = basic_format_string]’, declared with attribute ‘nodiscard’ [-Wunused-result] 1100 | EXPECT_THROW(fmt::format("{:nope}", Options{}), fmt::format_error); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/fmt/core.h:5, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/sys/expressionparser.hxx:32, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/field2d.hxx:34, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include/bout/coordinates.hxx:36, from /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/test_extras.hxx:13: /usr/include/fmt/format.h:4363:31: note: declared here 4363 | FMT_NODISCARD FMT_INLINE auto format(format_string fmt, T&&... args) | ^~~~~~ [ 95%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_options_netcdf.cxx [ 95%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_optionsreader.cxx [ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_output.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ 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/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_output.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_output.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_output.cxx [ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_range.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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-I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -c /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/sys/test_timer.cxx [ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode 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tests/unit/CMakeFiles/serial_tests.dir/test_extras.cxx.o cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode 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-I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googletest -isystem 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/lib ../../lib/libgmock.so.1.14.0 ../../lib/libbout++.so.5.1.0 ../../lib/libgtest.so.1.14.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.0.2 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.7.0 /usr/lib64/mpich/lib/libsundials_cvode.so.6.7.0 /usr/lib64/mpich/lib/libsundials_ida.so.6.7.0 /usr/lib64/mpich/lib/libsundials_arkode.so.5.7.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich 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/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 48 make -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f 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'/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 2%] Built target gtest make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE 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4%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 8%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 68%] Built target bout++ make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 68%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich Start 1: serial_tests 1/1 Test #1: serial_tests ..................... Passed 3.43 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 3.46 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target check-unit-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' + SEGFAULT_SIGNALS=segv + make check-mms-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-mms-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 35 make -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 2%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 8%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 91%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 94%] Built target MMS-wave-1d-y make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 94%] Built target test-fci-boundary-grid make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 97%] Built target test-fci-boundary make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 97%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 97%] Built target MMS-diffusion make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target MMS-spatial-fci make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich Start 53: MMS-diffusion 1/8 Test #53: MMS-diffusion .................... Passed 4.18 sec Start 54: MMS-spatial-fci 2/8 Test #54: MMS-spatial-fci .................. Passed 3.46 sec Start 55: MMS-wave-1d 3/8 Test #55: MMS-wave-1d ...................... Passed 3.29 sec Start 56: MMS-wave-1d-y 4/8 Test #56: MMS-wave-1d-y .................... Passed 3.34 sec Start 57: MMS-bracket 5/8 Test #57: MMS-bracket ...................... Passed 0.38 sec Start 58: MMS-derivatives3 6/8 Test #58: MMS-derivatives3 ................. Passed 0.64 sec Start 59: MMS-shiftedmetricinterp 7/8 Test #59: MMS-shiftedmetricinterp .......... Passed 2.93 sec Start 60: MMS-upwinding3 8/8 Test #60: MMS-upwinding3 ................... Passed 0.86 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 19.07 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' Built target check-mms-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' + SEGFAULT_SIGNALS=segv + make check-integrated-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-integrated-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f -B/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 55 make -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 1%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 5%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 58%] Built target bout++ make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 60%] Built target test-yupdown-weights make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-313-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Built target boutpp.cpython-313-x86_64-linux-gnu make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-313-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-313-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 63%] Built target boutpp make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 65%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 65%] Built target test_beuler make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 65%] Built target test-bout-override-default-option make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 67%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 67%] Built target test-communications make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 69%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 69%] Built target test-cyclic make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 70%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 70%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 72%] Built target test-drift-instability make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 72%] Built target test-drift-instability-staggered make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 74%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 76%] Built target test-gyro make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 76%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 78%] Built target test-interchange-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 78%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 80%] Built target test-interpolate-z make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 80%] Built target test-invertable-operator make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 81%] Built target test-invpar make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 81%] Built target test-laplace make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 83%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 83%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 85%] Built target test-laplacexy-short make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 85%] Built target test-laplacexz make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 87%] Built target test-multigrid-laplace make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 87%] Built target test-naulin-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 89%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 89%] Built target test-petsc-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 89%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 90%] Built target test-restart-io make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 90%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 92%] Built target test-smooth make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-snb/CMakeFiles/test-snb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 92%] Built target test-snb make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 94%] Built target test-solver make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 94%] Built target test-squash make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 96%] Built target test-stopCheck make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 96%] Built target test-stopCheck-file make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 98%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [ 98%] Built target test-twistshift-staggered make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target test-vec make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' [100%] Built target build-check-integrated-tests make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' ctest -R test- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich Start 2: test-backtrace 1/50 Test #2: test-backtrace ...................... Passed 0.73 sec Start 4: test-boutpp-collect 2/50 Test #4: test-boutpp-collect ................. Passed 0.44 sec Start 5: test-boutpp-collect-staggered 3/50 Test #5: test-boutpp-collect-staggered ....... Passed 0.43 sec Start 6: test-boutpp-legacy-model 4/50 Test #6: test-boutpp-legacy-model ............ Passed 0.52 sec Start 7: test-boutpp-mms-ddz 5/50 Test #7: test-boutpp-mms-ddz ................. Passed 0.36 sec Start 8: test-boutpp-print 6/50 Test #8: test-boutpp-print ................... Passed 0.37 sec Start 9: test-boutpp-simple-model 7/50 Test #9: test-boutpp-simple-model ............ Passed 0.54 sec Start 10: test-bout-override-default-option 8/50 Test #10: test-bout-override-default-option ... Passed 0.23 sec Start 11: test-command-args 9/50 Test #11: test-command-args ................... Passed 4.15 sec Start 12: test-communications 10/50 Test #12: test-communications ................. Passed 11.08 sec Start 13: test-coordinates-initialization 11/50 Test #13: test-coordinates-initialization ..... Passed 0.45 sec Start 14: test-cyclic 12/50 Test #14: test-cyclic ......................... Passed 4.18 sec Start 15: test-delp2 13/50 Test #15: test-delp2 .......................... Passed 7.31 sec Start 16: test-datafile-facade 14/50 Test #16: test-datafile-facade ................ Passed 1.85 sec Start 17: test-drift-instability 15/50 Test #17: test-drift-instability .............. Passed 2.95 sec Start 18: test-drift-instability-staggered 16/50 Test #18: test-drift-instability-staggered .... Passed 3.06 sec Start 19: test-fieldgroupComm 17/50 Test #19: test-fieldgroupComm ................. Passed 1.92 sec Start 20: test-fci-boundary 18/50 Test #20: test-fci-boundary ................... Passed 1.19 sec Start 21: test-griddata 19/50 Test #21: test-griddata ....................... Passed 0.77 sec Start 22: test-griddata-yboundary-guards 20/50 Test #22: test-griddata-yboundary-guards ...... Passed 9.32 sec Start 23: test-gyro 21/50 Test #23: test-gyro ........................... Passed 1.58 sec Start 24: test-initial 22/50 Test #24: test-initial ........................ Passed 5.69 sec Start 25: test-interchange-instability 23/50 Test #25: test-interchange-instability ........ Passed 6.43 sec Start 26: test-interpolate 24/50 Test #26: test-interpolate .................... Passed 5.07 sec Start 27: test-interpolate-z 25/50 Test #27: test-interpolate-z .................. Passed 1.98 sec Start 28: test-invertable-operator 26/50 Test #28: test-invertable-operator ............ Passed 1.17 sec Start 29: test-invpar 27/50 Test #29: test-invpar ......................... Passed 2.47 sec Start 30: test-laplace 28/50 Test #30: test-laplace ........................ Passed 6.94 sec Start 31: test-laplace-petsc3d 29/50 Test #31: test-laplace-petsc3d ................ Passed 5.68 sec Start 32: test-laplacexy-fv 30/50 Test #32: test-laplacexy-fv ................... Passed 52.98 sec Start 33: test-laplacexy-short 31/50 Test #33: test-laplacexy-short ................ Passed 147.74 sec Start 34: test-laplacexz 32/50 Test #34: test-laplacexz ...................... Passed 1.64 sec Start 35: test-multigrid-laplace 33/50 Test #35: test-multigrid-laplace .............. Passed 2.24 sec Start 36: test-naulin-laplace 34/50 Test #36: test-naulin-laplace ................. Passed 1.35 sec Start 37: test-options-netcdf 35/50 Test #37: test-options-netcdf ................. Passed 0.77 sec Start 38: test-petsc-laplace 36/50 Test #38: test-petsc-laplace .................. Passed 2.72 sec Start 39: test-petsc-laplace-MAST-grid 37/50 Test #39: test-petsc-laplace-MAST-grid ........ Passed 10.00 sec Start 40: test-restart-io 38/50 Test #40: test-restart-io ..................... Passed 2.65 sec Start 41: test-restarting 39/50 Test #41: test-restarting ..................... Passed 2.56 sec Start 42: test-smooth 40/50 Test #42: test-smooth ......................... Passed 2.00 sec Start 43: test-snb 41/50 Test #43: test-snb ............................ Passed 0.29 sec Start 44: test-solver 42/50 Test #44: test-solver ......................... Passed 1.89 sec Start 45: test-squash 43/50 Test #45: test-squash ......................... Passed 6.78 sec Start 46: test-stopCheck 44/50 Test #46: test-stopCheck ...................... Passed 0.33 sec Start 47: test-stopCheck-file 45/50 Test #47: test-stopCheck-file ................. Passed 2.58 sec Start 48: test-twistshift 46/50 Test #48: test-twistshift ..................... Passed 0.82 sec Start 49: test-twistshift-staggered 47/50 Test #49: test-twistshift-staggered ........... Passed 0.81 sec Start 50: test-vec 48/50 Test #50: test-vec ............................ Passed 0.60 sec Start 51: test-yupdown 49/50 Test #51: test-yupdown ........................ Passed 1.17 sec Start 52: test-yupdown-weights 50/50 Test #52: test-yupdown-weights ................ Passed 0.81 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 331.60 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' Built target check-integrated-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/build_mpich' + popd ~/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64 + eval 'unset LD_LIBRARY_PATH; unset MPI_COMPILER; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset MPI_PYTHON_SITEARCH; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_FORTRAN_MOD_DIR; unset MPI_HOME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SYSCONFIG; unset MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_PYTHON2_SITEARCH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 Processing files: bout++-mpich-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 ++ jobs -p + exit 0 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.EaXddz + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + DOCDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/README.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CITATION.bib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CITATION.cff /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Dszz4P + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-mpich + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/LICENSE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-mpich = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-mpich(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 bundled(libpvode) libbout++.so.5.1.0()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.20()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(mpich-x86_64) libsundials_cvode.so.6()(64bit)(mpich-x86_64) libsundials_ida.so.6()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.6()(64bit)(mpich-x86_64) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-mpich-devel-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-mpich-devel = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-mpich-devel(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel Processing files: python3-bout++-mpich-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: libboutpp.cpython-313-x86_64-linux-gnu.so()(64bit)(mpich-x86_64) python-bout++-mpich = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-mpich = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-mpich(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3.13-bout++-mpich = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbout++.so.5.1.0()(64bit)(mpich-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-openmpi-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.qhIKNq + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + DOCDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/README.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CITATION.bib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CITATION.cff /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.6ggQvP + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-openmpi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/LICENSE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-openmpi = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-openmpi(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 bundled(libpvode) libbout++.so.5.1.0()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.20()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(openmpi-x86_64) libsundials_cvode.so.6()(64bit)(openmpi-x86_64) libsundials_ida.so.6()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.6()(64bit)(openmpi-x86_64) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-openmpi-devel-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-openmpi-devel = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-openmpi-devel(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel Processing files: python3-bout++-openmpi-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: libboutpp.cpython-313-x86_64-linux-gnu.so()(64bit)(openmpi-x86_64) python-bout++-openmpi = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-openmpi = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-openmpi(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3.13-bout++-openmpi = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbout++.so.5.1.0()(64bit)(openmpi-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-common-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-common = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-common(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.exl3Vj + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + DOCDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/README.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CITATION.bib /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CITATION.cff /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/doc/python3-bout++ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.4LWFWw + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + cd BOUT++-v5.2.0.dev574+ge3f21cd2f + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/python3-bout++ + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/LICENSE /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BOUT++-v5.2.0.dev574+ge3f21cd2f/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT/usr/share/licenses/python3-bout++ + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-bout++ = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++ = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3.13-bout++ = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python3-boutdata python3-boututils python3-matplotlib python3-scipy Processing files: bout++-doc-5.2.0.dev574+ge3f21cd2f-1.fc42.noarch Provides: bout++-doc = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bout++-debugsource-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-debugsource = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-debugsource(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bout++-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-debuginfo(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Processing files: bout++-mpich-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-mpich-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-mpich-debuginfo(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 debuginfo(build-id) = 30a032eaf8494c0490db0c8681be7231202acafe debuginfo(build-id) = 375ccd68ba34536be38593f244102b283425ff88 debuginfo(build-id) = 54004fd19a190f6fdc02455de38f7c96dc65b9da Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Processing files: python3-bout++-mpich-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: debuginfo(build-id) = 3624754f882acef61f758526cb9695c4fb7459f8 python-bout++-mpich-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-mpich-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-mpich-debuginfo(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3.13-bout++-mpich-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Processing files: bout++-openmpi-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: bout++-openmpi-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 bout++-openmpi-debuginfo(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 debuginfo(build-id) = 610629c78cea008ac1f931cdefd6767813010a8e debuginfo(build-id) = 8549c9c4c72e3b17a3a85595ac1efc9e6dcfd58b debuginfo(build-id) = 9f7aaf337be5409b60f46fbe2e7d461b2bbf4d8f Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Processing files: python3-bout++-openmpi-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64 Provides: debuginfo(build-id) = c8552246440421b13da80424c293dce66bb3c272 python-bout++-openmpi-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-openmpi-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3-bout++-openmpi-debuginfo(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 python3.13-bout++-openmpi-debuginfo = 5.2.0.dev574+ge3f21cd2f-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0.dev574+ge3f21cd2f-1.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build/BUILDROOT Wrote: /builddir/build/RPMS/bout++-debugsource-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-doc-5.2.0.dev574+ge3f21cd2f-1.fc42.noarch.rpm Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-devel-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-mpich-devel-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-mpich-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-openmpi-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-mpich-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-common-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.noarch.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-5.2.0.dev574+ge3f21cd2f-1.fc42.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.ncdSWk + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + test -d /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + rm -rf /builddir/build/BUILD/bout++-5.2.0.dev574+ge3f21cd2f-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm Finish: build phase for bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1728371978.266791/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/bout++-5.2.0.dev574+ge3f21cd2f-1.fc42.src.rpm) Config(child) 30 minutes 42 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "bout++-doc", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "noarch" }, { "name": "bout++-mpich-devel", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-common", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-openmpi-devel", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-debuginfo", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-mpich", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "python3-bout++-mpich-debuginfo", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-debugsource", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "python3-bout++-mpich", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-mpich-debuginfo", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-openmpi", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "python3-bout++-openmpi", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "src" }, { "name": "python3-bout++-openmpi-debuginfo", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "bout++-openmpi-debuginfo", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "x86_64" }, { "name": "python3-bout++", "epoch": null, "version": "5.2.0.dev574+ge3f21cd2f", "release": "1.fc42", "arch": "noarch" } ] } RPMResults finished